Title: SYMPHONY in R
Description: An R interface to the SYMPHONY solver for mixed-integer linear programs.
Author: Reinhard Harter [aut],
Kurt Hornik [aut, cre],
Stefan Theussl [aut],
Cyrille Szymanski [ctb]
Maintainer: Kurt Hornik <Kurt.Hornik@R-project.org>
Diff between Rsymphony versions 0.1-19 dated 2015-02-23 and 0.1-20 dated 2015-05-30
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- configure | 19 ++++++++++++------- 3 files changed, 18 insertions(+), 13 deletions(-)
Title: Build, Deploy and Evaluate Hybrid Ensembles
Description: Functions to build and deploy a hybrid ensemble consisting of eight different sub-ensembles: bagged logistic regressions, random forest, stochastic boosting, kernel factory, bagged neural networks, bagged support vector machines, rotation forest, and bagged k-nearest neighbors. Functions to cross-validate the hybrid ensemble and plot and summarize the results are also provided. There is also a function to assess the importance of the predictors.
Author: Michel Ballings, Dauwe Vercamer, and Dirk Van den Poel
Maintainer: Michel Ballings <Michel.Ballings@GMail.com>
Diff between hybridEnsemble versions 0.1.1 dated 2014-03-23 and 1.0.0 dated 2015-05-30
DESCRIPTION | 23 MD5 | 38 NAMESPACE | 2 R/CVhybridEnsemble.R | 1146 +++++++++--------- R/hybridEnsemble.R | 2397 ++++++++++++++++++++------------------- R/hybridEnsembleNews.R | 30 R/importance.hybridEnsemble.R | 154 +- R/plot.CVhybridEnsemble.R | 187 +-- R/predict.hybridEnsemble.R | 347 +++-- R/summary.CVhybridEnsemble.R | 299 ++-- R/zzz.R | 2 inst/NEWS | 33 man/CVhybridEnsemble.Rd | 498 +++----- man/hybridEnsemble.Rd | 529 +++----- man/hybridEnsembleNews.Rd | 60 man/importance.hybridEnsemble.Rd | 139 -- man/plot.CVhybridEnsemble.Rd | 136 -- man/predict.hybridEnsemble.Rd | 123 -- man/summary.CVhybridEnsemble.Rd | 174 +- tests |only 20 files changed, 3149 insertions(+), 3168 deletions(-)
More information about hybridEnsemble at CRAN
Permanent link
More information about signmedian.test at CRAN
Permanent link
Title: Interactive Web-Maps Based on the Leaflet JavaScript Library
Description: Display your spatial data on interactive web-maps using the open-source JavaScript library Leaflet. 'leafletR' provides basic web-mapping functionality to combine vector data and online map tiles from different sources. See <http://leafletjs.com> for more information on Leaflet.
Author: Christian Graul, with contributions from Francois Guillem
Maintainer: Christian Graul <christian.graul@gmail.com>
Diff between leafletR versions 0.3-2 dated 2015-04-09 and 0.3-3 dated 2015-05-30
DESCRIPTION | 10 ++++----- MD5 | 38 ++++++++++++++++++------------------- R/dfToGeoJSON.R | 20 ++++++++++++++++--- R/leaflet.R | 10 ++++----- R/print.categorized.style.R | 4 +-- R/print.graduated.style.R | 4 +-- R/print.single.style.R | 28 +++++++++++++++++---------- R/styleGrad.R | 37 ++++++++++++++++++++++++++++-------- R/styleSingle.R | 6 +++-- R/zzz.R | 4 +-- inst/CITATION | 4 +-- inst/NEWS | 27 ++++++++++++++++++++++++-- inst/templates/css.brew | 33 +++++++++++++++++++++++--------- inst/templates/data.brew | 14 +++++++++---- inst/templates/legend.brew | 45 ++++++++++++++++++++++++++++---------------- inst/templates/main.brew | 19 +++++++++++++++--- inst/templates/style.brew | 8 +++---- man/leaflet.Rd | 4 +++ man/styleGrad.Rd | 25 +++++++++++++++--------- man/styleSingle.Rd | 12 +++++++---- 20 files changed, 241 insertions(+), 111 deletions(-)
Title: Bindings to the 'CommonMark' Reference Implementation
Description: The 'CommonMark' spec is a rationalized version of Markdown syntax.
This package converts markdown text to various formats including a parse
tree in XML format.
Author: Jeroen Ooms [aut, cre],
John MacFarlane [cph] (Author of cmark)
Maintainer: Jeroen Ooms <jeroen.ooms@stat.ucla.edu>
Diff between commonmark versions 0.2 dated 2015-05-27 and 0.4 dated 2015-05-30
commonmark-0.2/commonmark/configure |only commonmark-0.2/commonmark/src/cmark/config.h |only commonmark-0.4/commonmark/DESCRIPTION | 8 ++++---- commonmark-0.4/commonmark/MD5 | 17 ++++++++--------- commonmark-0.4/commonmark/R/markdown.R | 15 +++++++++------ commonmark-0.4/commonmark/man/commonmark.Rd | 3 +-- commonmark-0.4/commonmark/src/Makevars | 16 ++++++++++------ commonmark-0.4/commonmark/src/cmark/buffer.c | 6 ++++++ commonmark-0.4/commonmark/src/cmark/chunk.h | 4 +++- commonmark-0.4/commonmark/src/config.h |only commonmark-0.4/commonmark/src/wrapper.c | 4 ++-- 11 files changed, 43 insertions(+), 30 deletions(-)
Title: Case Influence in Structural Equation Models
Description: Influence measures in Structural Equation Models: a set of tools for evaluating several measures of case influence for Structural Equation Models following the approach of Pek and MacCallum (2011).
Author: Massimiliano Pastore & Gianmarco Altoe'
Maintainer: Massimiliano Pastore <massimiliano.pastore@unipd.it>
Diff between influence.SEM versions 1.4 dated 2014-07-26 and 1.5 dated 2015-05-30
DESCRIPTION | 10 ++++---- MD5 | 18 ++++++++------ NAMESPACE | 2 - NEWS |only R/Deltachi.R | 4 +-- R/Likedist.R | 4 +-- R/fitinfluence.R | 63 +++++++++++++++++++++++++++++++--------------------- R/genCookDist.R | 4 +-- R/influence.SEM.R |only R/parinfluence.R | 4 +-- man/fitinfluence.Rd | 2 - 11 files changed, 63 insertions(+), 48 deletions(-)
Title: Improved Access for Blind Users
Description: Blind users do not have access to the graphical output from R without printing the content of graph windows to an embosser of some kind. This is not as immediate as is required for efficient access to statistical output. The functions here are created so that blind people can make even better use of R.
Author: A. Jonathan R. Godfrey [aut, cre], Greg Snow [ctb], James Curtis [ctb], Paul Murrell [ctb], Timothy Bilton [ctb], Yihui Xie [ctb]
Maintainer: A. Jonathan R. Godfrey <a.j.godfrey@massey.ac.nz>
Diff between BrailleR versions 0.18-1 dated 2015-03-31 and 0.20 dated 2015-05-30
BrailleR-0.18-1/BrailleR/R/Setup.R |only BrailleR-0.18-1/BrailleR/inst/Settings |only BrailleR-0.18-1/BrailleR/inst/doc/BrailleRManual.R |only BrailleR-0.18-1/BrailleR/inst/doc/BrailleRManual.html |only BrailleR-0.18-1/BrailleR/inst/doc/BrailleRManual.rmd |only BrailleR-0.18-1/BrailleR/vignettes/BrailleRManual.rmd |only BrailleR-0.20/BrailleR/DESCRIPTION | 12 BrailleR-0.20/BrailleR/MD5 | 90 ++-- BrailleR-0.20/BrailleR/NAMESPACE | 11 BrailleR-0.20/BrailleR/R/GettingStarted.R |only BrailleR-0.20/BrailleR/R/Internal.R |only BrailleR-0.20/BrailleR/R/MakeBatch.R |only BrailleR-0.20/BrailleR/R/MaskedFunctions.R | 4 BrailleR-0.20/BrailleR/R/OneFactor.R | 13 BrailleR-0.20/BrailleR/R/OnePredictor.R |only BrailleR-0.20/BrailleR/R/Options.R | 54 ++ BrailleR-0.20/BrailleR/R/TwoFactors.R | 7 BrailleR-0.20/BrailleR/R/UniDesc.R | 87 ++-- BrailleR-0.20/BrailleR/R/VIMethod1_JG.R | 51 ++ BrailleR-0.20/BrailleR/R/VIMethod2_TB.R | 43 ++ BrailleR-0.20/BrailleR/R/WhereXY.R | 14 BrailleR-0.20/BrailleR/R/dotplots.R |only BrailleR-0.20/BrailleR/R/zzz.R | 14 BrailleR-0.20/BrailleR/build/vignette.rds |binary BrailleR-0.20/BrailleR/inst/CITATION | 2 BrailleR-0.20/BrailleR/inst/NEWS |only BrailleR-0.20/BrailleR/inst/PREFERENCES |only BrailleR-0.20/BrailleR/inst/css |only BrailleR-0.20/BrailleR/inst/doc/BrailleRHistory.R |only BrailleR-0.20/BrailleR/inst/doc/BrailleRHistory.html |only BrailleR-0.20/BrailleR/inst/doc/BrailleRHistory.rmd |only BrailleR-0.20/BrailleR/inst/doc/Ex1histograms.html | 204 +++++----- BrailleR-0.20/BrailleR/inst/doc/Ex1histograms.rmd | 14 BrailleR-0.20/BrailleR/inst/doc/Ex2BasicNumerical.html | 102 ++--- BrailleR-0.20/BrailleR/inst/doc/Ex2BasicNumerical.rmd | 13 BrailleR-0.20/BrailleR/inst/doc/Ex3UnivariateDescription.html | 100 ++-- BrailleR-0.20/BrailleR/inst/doc/Ex3UnivariateDescription.rmd | 14 BrailleR-0.20/BrailleR/inst/doc/Ex4SingleResponseOneGroupingFactor.html | 103 ++--- BrailleR-0.20/BrailleR/inst/doc/Ex4SingleResponseOneGroupingFactor.rmd | 16 BrailleR-0.20/BrailleR/inst/doc/GettingStarted.R |only BrailleR-0.20/BrailleR/inst/doc/GettingStarted.Rmd |only BrailleR-0.20/BrailleR/inst/doc/GettingStarted.html |only BrailleR-0.20/BrailleR/man/BrailleR-package.Rd | 4 BrailleR-0.20/BrailleR/man/GetGoing.Rd |only BrailleR-0.20/BrailleR/man/Internal.Rd |only BrailleR-0.20/BrailleR/man/MakeBatch.Rd | 8 BrailleR-0.20/BrailleR/man/OneFactor.Rd | 7 BrailleR-0.20/BrailleR/man/OnePredictor.Rd |only BrailleR-0.20/BrailleR/man/SetOptions.Rd | 18 BrailleR-0.20/BrailleR/man/UniDesc.Rd | 7 BrailleR-0.20/BrailleR/man/VI.Rd | 2 BrailleR-0.20/BrailleR/man/dotplot.Rd |only BrailleR-0.20/BrailleR/vignettes/BrailleRHistory.rmd |only BrailleR-0.20/BrailleR/vignettes/BrailleRPublications.bib |only BrailleR-0.20/BrailleR/vignettes/Ex1histograms.rmd | 14 BrailleR-0.20/BrailleR/vignettes/Ex2BasicNumerical.rmd | 13 BrailleR-0.20/BrailleR/vignettes/Ex3UnivariateDescription.rmd | 14 BrailleR-0.20/BrailleR/vignettes/Ex4SingleResponseOneGroupingFactor.rmd | 16 BrailleR-0.20/BrailleR/vignettes/GettingStarted.Rmd |only 59 files changed, 662 insertions(+), 409 deletions(-)
Title: Recommender System using Matrix Factorization
Description: R wrapper of the 'libmf' library
(http://www.csie.ntu.edu.tw/~cjlin/libmf/) for recommender
system using matrix factorization. It is typically used to
approximate an incomplete matrix using the product of two
matrices in a latent space. Other common names for this task
include "collaborative filtering", "matrix completion",
"matrix recovery", etc.
Author: Yixuan Qiu, Chih-Jen Lin, Yu-Chin Juan, Yong Zhuang,
Wei-Sheng Chin and other contributors. See file AUTHORS for
details.
Maintainer: Yixuan Qiu <yixuan.qiu@cos.name>
Diff between recosystem versions 0.2.5 dated 2015-02-07 and 0.3 dated 2015-05-30
recosystem-0.2.5/recosystem/R/RecoDat.R |only recosystem-0.2.5/recosystem/man/convert.Rd |only recosystem-0.2.5/recosystem/src/convert.cpp |only recosystem-0.2.5/recosystem/src/memalign.cpp |only recosystem-0.2.5/recosystem/src/output.cpp |only recosystem-0.2.5/recosystem/src/predict.cpp |only recosystem-0.2.5/recosystem/src/rand.h |only recosystem-0.2.5/recosystem/src/train.cpp |only recosystem-0.2.5/recosystem/src/view.cpp |only recosystem-0.3/recosystem/DESCRIPTION | 10 recosystem-0.3/recosystem/LICENSE | 2 recosystem-0.3/recosystem/MD5 | 57 recosystem-0.3/recosystem/R/RecoModel.R | 39 recosystem-0.3/recosystem/R/RecoSys.R | 738 +++++---- recosystem-0.3/recosystem/README.md | 242 +-- recosystem-0.3/recosystem/build/vignette.rds |binary recosystem-0.3/recosystem/inst/AUTHORS | 4 recosystem-0.3/recosystem/inst/COPYRIGHTS | 4 recosystem-0.3/recosystem/inst/NEWS.Rd | 10 recosystem-0.3/recosystem/inst/doc/introduction.R | 13 recosystem-0.3/recosystem/inst/doc/introduction.Rmd | 147 - recosystem-0.3/recosystem/inst/doc/introduction.html | 284 +-- recosystem-0.3/recosystem/man/Reco.Rd | 25 recosystem-0.3/recosystem/man/output.Rd | 57 recosystem-0.3/recosystem/man/predict.Rd | 60 recosystem-0.3/recosystem/man/train.Rd | 105 - recosystem-0.3/recosystem/man/tune.Rd |only recosystem-0.3/recosystem/src/Makevars | 23 recosystem-0.3/recosystem/src/Makevars.win | 23 recosystem-0.3/recosystem/src/mf.cpp | 1502 ++++++++++++++++--- recosystem-0.3/recosystem/src/mf.h | 166 -- recosystem-0.3/recosystem/src/reco-output.cpp |only recosystem-0.3/recosystem/src/reco-predict.cpp |only recosystem-0.3/recosystem/src/reco-train.cpp |only recosystem-0.3/recosystem/src/reco-tune.cpp |only recosystem-0.3/recosystem/src/reco-utils.h |only recosystem-0.3/recosystem/vignettes/introduction.Rmd | 147 - 37 files changed, 2410 insertions(+), 1248 deletions(-)
Title: Regularization Paths for Regression Models with Grouped
Covariates
Description: Efficient algorithms for fitting the regularization path of
linear or logistic regression models with grouped penalties. This
includes group selection methods such as group lasso, group MCP, and
group SCAD as well as bi-level selection methods such as the group
exponential lasso, the composite MCP, and the group bridge.
Author: Patrick Breheny
Maintainer: Patrick Breheny <patrick-breheny@uiowa.edu>
Diff between grpreg versions 2.8-0 dated 2014-11-15 and 2.8-1 dated 2015-05-30
DESCRIPTION | 12 ++++++------ MD5 | 15 ++++++++------- NEWS | 8 ++++++++ R/cv.grpreg.R | 18 +++++++++++------- R/grpreg.R | 1 + R/predict.R | 14 ++++++++++++-- README.md |only man/grpreg-package.Rd | 16 ++++++++++------ man/grpreg.Rd | 10 +++++----- 9 files changed, 61 insertions(+), 33 deletions(-)
Title: Dendrochronology Program Library in R
Description: Perform tree-ring analyses such as detrending, chronology
building, and cross dating. Read and write standard file formats
used in dendrochronology.
Author: Andy Bunn [aut, cph, cre, trl], Mikko Korpela [aut, trl], Franco Biondi [aut, cph], Filipe Campelo [aut, cph], Pierre Mérian [aut, cph], Fares Qeadan [aut, cph], Christian Zang [aut, cph], Allan Buras [ctb], Jacob Cecile [ctb], Manfred Mudelsee [ctb], Michael Schulz [ctb]
Maintainer: Andy Bunn <andy.bunn@wwu.edu>
Diff between dplR versions 1.6.2 dated 2015-01-05 and 1.6.3 dated 2015-05-30
dplR-1.6.2/dplR/inst/unitTests |only dplR-1.6.2/dplR/tests/doRUnit.R |only dplR-1.6.3/dplR/ChangeLog | 148 ++++++++++++++++ dplR-1.6.3/dplR/DESCRIPTION | 30 +-- dplR-1.6.3/dplR/MD5 | 235 +++++++++++++------------- dplR-1.6.3/dplR/NAMESPACE | 16 + dplR-1.6.3/dplR/R/ccf.series.rwl.R | 2 dplR-1.6.3/dplR/R/chron.R | 12 - dplR-1.6.3/dplR/R/common.interval.R | 6 dplR-1.6.3/dplR/R/corr.rwl.seg.R | 5 dplR-1.6.3/dplR/R/corr.series.seg.R | 5 dplR-1.6.3/dplR/R/crn.plot.R | 3 dplR-1.6.3/dplR/R/detrend.series.R | 15 - dplR-1.6.3/dplR/R/ffcsaps.R | 12 - dplR-1.6.3/dplR/R/helpers.R | 53 +++++ dplR-1.6.3/dplR/R/i.detrend.series.R | 2 dplR-1.6.3/dplR/R/latexify.R | 11 - dplR-1.6.3/dplR/R/morlet.R | 36 +-- dplR-1.6.3/dplR/R/net.R |only dplR-1.6.3/dplR/R/pointer.R | 2 dplR-1.6.3/dplR/R/read.crn.R | 2 dplR-1.6.3/dplR/R/read.fh.R | 3 dplR-1.6.3/dplR/R/read.ids.R | 10 - dplR-1.6.3/dplR/R/read.tucson.R | 19 +- dplR-1.6.3/dplR/R/redfit.R | 39 ++-- dplR-1.6.3/dplR/R/rwi.stats.running.R | 7 dplR-1.6.3/dplR/R/rwl.stats.R | 19 +- dplR-1.6.3/dplR/R/series.rwl.plot.R | 9 dplR-1.6.3/dplR/R/skel.plot.R | 16 + dplR-1.6.3/dplR/R/spag.plot.R | 2 dplR-1.6.3/dplR/R/wc.to.po.R | 6 dplR-1.6.3/dplR/R/write.compact.R | 5 dplR-1.6.3/dplR/R/write.crn.R | 56 +++--- dplR-1.6.3/dplR/R/write.tridas.R | 15 - dplR-1.6.3/dplR/R/write.tucson.R | 2 dplR-1.6.3/dplR/build/vignette.rds |binary dplR-1.6.3/dplR/inst/CITATION | 4 dplR-1.6.3/dplR/inst/doc/intro-dplR.pdf |binary dplR-1.6.3/dplR/inst/doc/math-dplR.R | 29 --- dplR-1.6.3/dplR/inst/doc/math-dplR.Rnw.txt | 22 +- dplR-1.6.3/dplR/inst/doc/math-dplR.bib | 10 - dplR-1.6.3/dplR/inst/doc/math-dplR.pdf |binary dplR-1.6.3/dplR/inst/doc/timeseries-dplR.pdf |binary dplR-1.6.3/dplR/inst/doc/xdate-dplR.pdf |binary dplR-1.6.3/dplR/man/anos1.Rd | 9 dplR-1.6.3/dplR/man/bai.in.Rd | 40 +++- dplR-1.6.3/dplR/man/bai.out.Rd | 44 +++- dplR-1.6.3/dplR/man/ca533.Rd | 10 - dplR-1.6.3/dplR/man/cana157.Rd | 11 - dplR-1.6.3/dplR/man/ccf.series.rwl.Rd | 48 ++--- dplR-1.6.3/dplR/man/chron.Rd | 23 +- dplR-1.6.3/dplR/man/cms.Rd | 52 ++++- dplR-1.6.3/dplR/man/co021.Rd | 1 dplR-1.6.3/dplR/man/combine.rwl.Rd | 6 dplR-1.6.3/dplR/man/common.interval.Rd | 6 dplR-1.6.3/dplR/man/corr.rwl.seg.Rd | 10 - dplR-1.6.3/dplR/man/corr.series.seg.Rd | 20 +- dplR-1.6.3/dplR/man/crn.plot.Rd | 32 ++- dplR-1.6.3/dplR/man/detrend.Rd | 32 +-- dplR-1.6.3/dplR/man/detrend.series.Rd | 70 +++---- dplR-1.6.3/dplR/man/dplR-package.Rd | 12 - dplR-1.6.3/dplR/man/ffcsaps.Rd | 12 - dplR-1.6.3/dplR/man/fill.internal.NA.Rd | 24 +- dplR-1.6.3/dplR/man/gini.coef.Rd | 12 - dplR-1.6.3/dplR/man/glk.Rd | 18 + dplR-1.6.3/dplR/man/gp.d2pith.Rd | 11 - dplR-1.6.3/dplR/man/gp.dbh.Rd | 11 - dplR-1.6.3/dplR/man/gp.po.Rd | 11 - dplR-1.6.3/dplR/man/gp.rwl.Rd | 9 dplR-1.6.3/dplR/man/hanning.Rd | 6 dplR-1.6.3/dplR/man/i.detrend.Rd | 17 - dplR-1.6.3/dplR/man/i.detrend.series.Rd | 19 +- dplR-1.6.3/dplR/man/insert.ring.Rd | 8 dplR-1.6.3/dplR/man/interseries.cor.Rd | 10 - dplR-1.6.3/dplR/man/latexDate.Rd | 1 dplR-1.6.3/dplR/man/latexify.Rd | 21 +- dplR-1.6.3/dplR/man/morlet.Rd | 45 ++-- dplR-1.6.3/dplR/man/net.Rd |only dplR-1.6.3/dplR/man/plot.rwl.Rd | 9 dplR-1.6.3/dplR/man/po.to.wc.Rd | 10 - dplR-1.6.3/dplR/man/pointer.Rd | 25 +- dplR-1.6.3/dplR/man/powt.Rd | 8 dplR-1.6.3/dplR/man/print.redfit.Rd | 8 dplR-1.6.3/dplR/man/rasterPlot.Rd | 5 dplR-1.6.3/dplR/man/rcs.Rd | 46 ++--- dplR-1.6.3/dplR/man/read.compact.Rd | 3 dplR-1.6.3/dplR/man/read.crn.Rd | 11 - dplR-1.6.3/dplR/man/read.fh.Rd | 20 +- dplR-1.6.3/dplR/man/read.ids.Rd | 16 - dplR-1.6.3/dplR/man/read.rwl.Rd | 1 dplR-1.6.3/dplR/man/read.tridas.Rd | 223 +++++++++++++----------- dplR-1.6.3/dplR/man/read.tucson.Rd | 13 - dplR-1.6.3/dplR/man/redfit.Rd | 18 + dplR-1.6.3/dplR/man/rwi.stats.running.Rd | 61 +++--- dplR-1.6.3/dplR/man/rwl.stats.Rd | 18 + dplR-1.6.3/dplR/man/sea.Rd | 10 - dplR-1.6.3/dplR/man/seg.plot.Rd | 8 dplR-1.6.3/dplR/man/sens1.Rd | 8 dplR-1.6.3/dplR/man/sens2.Rd | 8 dplR-1.6.3/dplR/man/series.rwl.plot.Rd | 9 dplR-1.6.3/dplR/man/skel.plot.Rd | 38 ++-- dplR-1.6.3/dplR/man/spag.plot.Rd | 12 - dplR-1.6.3/dplR/man/strip.rwl.Rd | 6 dplR-1.6.3/dplR/man/tbrm.Rd | 26 +- dplR-1.6.3/dplR/man/tridas.vocabulary.Rd | 27 +- dplR-1.6.3/dplR/man/uuid.gen.Rd | 9 dplR-1.6.3/dplR/man/wavelet.plot.Rd | 45 ++-- dplR-1.6.3/dplR/man/wc.to.po.Rd | 12 - dplR-1.6.3/dplR/man/write.compact.Rd | 22 +- dplR-1.6.3/dplR/man/write.crn.Rd | 40 ++-- dplR-1.6.3/dplR/man/write.rwl.Rd | 12 - dplR-1.6.3/dplR/man/write.tridas.Rd | 112 ++++++------ dplR-1.6.3/dplR/man/write.tucson.Rd | 52 ++--- dplR-1.6.3/dplR/man/xskel.ccf.plot.Rd | 54 +++-- dplR-1.6.3/dplR/man/xskel.plot.Rd | 54 +++-- dplR-1.6.3/dplR/tests/testthat |only dplR-1.6.3/dplR/tests/testthat.R |only dplR-1.6.3/dplR/vignettes/timeseries-dplR.Rnw | 2 118 files changed, 1522 insertions(+), 1068 deletions(-)
Title: Bayesian Linear Mixed-Effects Models
Description: Maximum a posteriori estimation for linear and generalized
linear mixed-effects models in a Bayesian setting. Extends
lme4 by Douglas Bates, Martin Maechler, Ben Bolker, and Steve Walker.
Author: Vincent Dorie <vjd4@nyu.edu>
Maintainer: Vincent Dorie <vjd4@nyu.edu>
Diff between blme versions 1.0-2 dated 2014-03-12 and 1.0-3 dated 2015-05-30
blme-1.0-2/blme/.Rinstignore |only blme-1.0-2/blme/README |only blme-1.0-2/blme/inst/tests |only blme-1.0-2/blme/tests/doRUnit.R |only blme-1.0-3/blme/ChangeLog | 34 +- blme-1.0-3/blme/DESCRIPTION | 16 - blme-1.0-3/blme/MD5 | 64 ++-- blme-1.0-3/blme/NAMESPACE | 13 blme-1.0-3/blme/R/blmer.R | 563 ++++++++++++++++++++++++++++----------- blme-1.0-3/blme/R/control.R | 108 +++---- blme-1.0-3/blme/R/devFun.R | 334 +++++++++++++---------- blme-1.0-3/blme/R/dist.R | 328 +++++++++++----------- blme-1.0-3/blme/R/dist_custom.R | 20 - blme-1.0-3/blme/R/dist_gamma.R | 82 ++--- blme-1.0-3/blme/R/dist_normal.R | 46 +-- blme-1.0-3/blme/R/dist_point.R | 5 blme-1.0-3/blme/R/dist_t.R | 43 +- blme-1.0-3/blme/R/dist_wishart.R | 150 +++++----- blme-1.0-3/blme/R/generics.R | 9 blme-1.0-3/blme/R/optimize.R | 211 -------------- blme-1.0-3/blme/R/parameters.R | 105 ++++--- blme-1.0-3/blme/R/priorEval.R | 151 +++++----- blme-1.0-3/blme/R/string.R | 28 - blme-1.0-3/blme/R/util.R | 30 +- blme-1.0-3/blme/README.md |only blme-1.0-3/blme/inst/CITATION |only blme-1.0-3/blme/man/blmer.Rd | 1 blme-1.0-3/blme/tests/test-all.R |only blme-1.0-3/blme/tests/testthat |only 29 files changed, 1267 insertions(+), 1074 deletions(-)