Sat, 20 Jun 2015

Package sjmisc updated to version 1.0.3 with previous version 1.0.2 dated 2015-05-17

Title: Miscellaneous Data Management Tools
Description: Collection of several utility functions (especially intended for people coming from other statistical software packages like 'SPSS', and/or who are new to R), supporting following common tasks: 1) Reading and writing data between R and other statistical software packages like 'SPSS', 'SAS' or 'Stata' and working with labelled data; this includes easy ways to get and set label attributes, to convert labelled vectors into factors (and vice versa) etc. 2) Data transformation tasks like recoding, dichotomizing or grouping variables, setting and replacing missing values. 3) Convenient functions to perform frequently used statistical tests, or to calculate various commonly used statistical coefficients.
Author: Daniel Lüdecke <d.luedecke@uke.de>
Maintainer: Daniel Lüdecke <d.luedecke@uke.de>

Diff between sjmisc versions 1.0.2 dated 2015-05-17 and 1.0.3 dated 2015-06-20

 sjmisc-1.0.2/sjmisc/data/efc2.RData       |only
 sjmisc-1.0.2/sjmisc/data/efc3.RData       |only
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 sjmisc-1.0.3/sjmisc/DESCRIPTION           |   20 
 sjmisc-1.0.3/sjmisc/MD5                   |  107 -
 sjmisc-1.0.3/sjmisc/NAMESPACE             |    7 
 sjmisc-1.0.3/sjmisc/NEWS                  |  133 -
 sjmisc-1.0.3/sjmisc/R/efc.R               |  117 -
 sjmisc-1.0.3/sjmisc/R/helpfunctions.R     |  234 +-
 sjmisc-1.0.3/sjmisc/R/sjImportSPSS.R      | 2635 ++++++++++++++++-------------
 sjmisc-1.0.3/sjmisc/R/sjRecode.R          |  541 ++++-
 sjmisc-1.0.3/sjmisc/R/sjStatistics.R      | 2711 +++++++++++++++---------------
 sjmisc-1.0.3/sjmisc/README.md             |   45 
 sjmisc-1.0.3/sjmisc/inst/CITATION         |   18 
 sjmisc-1.0.3/sjmisc/man/add_labels.Rd     |only
 sjmisc-1.0.3/sjmisc/man/chisq_gof.Rd      |    2 
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 sjmisc-1.0.3/sjmisc/man/cronb.Rd          |    6 
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 sjmisc-1.0.3/sjmisc/man/dicho.Rd          |   49 
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 sjmisc-1.0.3/sjmisc/man/rec.Rd            |   63 
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 sjmisc-1.0.3/sjmisc/man/set_val_labels.Rd |   53 
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 sjmisc-1.0.3/sjmisc/man/table_values.Rd   |    2 
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 sjmisc-1.0.3/sjmisc/man/to_label.Rd       |    2 
 sjmisc-1.0.3/sjmisc/man/to_value.Rd       |    7 
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 sjmisc-1.0.3/sjmisc/man/word_wrap.Rd      |    7 
 60 files changed, 4039 insertions(+), 3282 deletions(-)

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Package rDEA updated to version 1.2-1 with previous version 1.1-1 dated 2015-03-27

Title: Robust Data Envelopment Analysis (DEA) for R
Description: Data Envelopment Analysis for R, estimating robust DEA scores without and with environmental variables and doing returns-to-scale tests.
Author: Jaak Simm [aut, cre], Galina Besstremyannaya [aut]
Maintainer: Jaak Simm <jaak.simm@gmail.com>

Diff between rDEA versions 1.1-1 dated 2015-03-27 and 1.2-1 dated 2015-06-20

 DESCRIPTION           |    6 +++---
 MD5                   |   19 ++++++++++---------
 R/dea.env.robust.R    |   16 ++++++++++++++--
 R/dea.robust.R        |   32 ++++++++++++++++++++++++++------
 R/rts.test.R          |   27 +++++++++++++--------------
 README.md             |    6 +++++-
 inst/CHANGELOG        |    5 +++++
 man/dea.Rd            |    2 ++
 man/dea_env_robust.Rd |    2 +-
 man/rts_test.Rd       |   25 ++++++++++++++++++++-----
 src/tags              |only
 11 files changed, 99 insertions(+), 41 deletions(-)

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Package matrixStats updated to version 0.14.1 with previous version 0.14.0 dated 2015-02-13

Title: Methods that Apply to Rows and Columns of Matrices (and to Vectors)
Description: Methods operating on rows and columns of matrices, e.g. col / rowMedians(), col / rowRanks(), and col / rowSds(). There are also some vector-based methods, e.g. binMeans(), madDiff() and weightedMedians(). All methods have been optimized for speed and memory usage.
Author: Henrik Bengtsson [aut, cre, cph], Hector Corrada Bravo [ctb], Robert Gentleman [ctb], Ola Hossjer [ctb], Harris Jaffee [ctb], Dongcan Jiang [ctb], Peter Langfelder [ctb]
Maintainer: Henrik Bengtsson <henrikb@braju.com>

Diff between matrixStats versions 0.14.0 dated 2015-02-13 and 0.14.1 dated 2015-06-20

 DESCRIPTION                                    |   16 +-
 MD5                                            |  162 ++++++++++++-------------
 NEWS                                           |   35 +++++
 R/anyMissing.R                                 |    7 -
 R/binCounts.R                                  |    2 
 R/binMeans.R                                   |    2 
 R/rowAvgsPerColSet.R                           |    4 
 R/rowCounts.R                                  |   36 ++++-
 R/rowIQRs.R                                    |   16 +-
 R/rowMads.R                                    |    7 -
 R/rowQuantiles.R                               |   30 ++--
 R/rowRanks.R                                   |    2 
 R/rowWeightedMeans.R                           |   13 +-
 R/rowWeightedMedians.R                         |   10 -
 R/weightedMean.R                               |   15 ++
 build/vignette.rds                             |binary
 inst/benchmarking/anyMissing.md.rsp            |    2 
 inst/benchmarking/colRowAlls.md.rsp            |    1 
 inst/benchmarking/colRowAnyMissings.md.rsp     |    1 
 inst/benchmarking/colRowAnys.md.rsp            |    1 
 inst/benchmarking/colRowCounts.md.rsp          |    1 
 inst/benchmarking/colRowCummins.md.rsp         |    1 
 inst/benchmarking/colRowCumprods.md.rsp        |    1 
 inst/benchmarking/colRowCumsums.md.rsp         |    1 
 inst/benchmarking/colRowDiffs.md.rsp           |    1 
 inst/benchmarking/colRowLogSumExps.md.rsp      |    1 
 inst/benchmarking/colRowMads.md.rsp            |    1 
 inst/benchmarking/colRowMeans.md.rsp           |    1 
 inst/benchmarking/colRowMedians.md.rsp         |    1 
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 inst/benchmarking/colRowTabulates.md.rsp       |    1 
 inst/benchmarking/colRowVars.md.rsp            |    1 
 inst/benchmarking/colRowWeightedMeans.md.rsp   |    1 
 inst/benchmarking/colRowWeightedMedians.md.rsp |    1 
 inst/benchmarking/includes/results.md.rsp      |   22 ++-
 inst/doc/matrixStats-methods.html              |    4 
 man/binCounts.Rd                               |    2 
 man/binMeans.Rd                                |    2 
 man/matrixStats-package.Rd                     |    5 
 man/weightedMean.Rd                            |   15 ++
 man/weightedMedian.Rd                          |    2 
 src/binCounts.c                                |    9 +
 src/binMeans.c                                 |    5 
 src/logSumExp_internal.c                       |   18 +-
 src/productExpSumLog_TYPE-template.h           |    7 -
 src/rowCounts_TYPE-template.h                  |    7 -
 src/rowCumMinMaxs_TYPE-template.h              |    2 
 src/rowCumprods_TYPE-template.h                |   50 ++++---
 src/rowCumsums_TYPE-template.h                 |    2 
 src/weightedMean_TYPE-template.h               |    9 -
 src/x_OP_y_TYPE-template.h                     |   35 ++++-
 tests/anyMissing.R                             |   30 ++--
 tests/benchmark.R                              |   16 +-
 tests/binCounts.R                              |   42 ++++++
 tests/binMeans,binCounts.R                     |   18 ++
 tests/logSumExp.R                              |   43 ++++++
 tests/meanOver.R                               |    4 
 tests/product.R                                |    9 +
 tests/psortKM.R                                |    6 
 tests/rowAllAnys.R                             |   95 ++++++++++----
 tests/rowCounts.R                              |    7 +
 tests/rowCumMinMaxs.R                          |   93 ++++++++++----
 tests/rowCumprods.R                            |   75 ++++++++++-
 tests/rowCumsums.R                             |   68 ++++++++--
 tests/rowIQRs.R                                |   12 +
 tests/rowLogSumExps.R                          |    4 
 tests/rowMedians.R                             |    7 -
 tests/rowOrderStats.R                          |   18 +-
 tests/rowProds.R                               |    6 
 tests/rowQuantiles.R                           |   30 +++-
 tests/rowRanks.R                               |   13 +-
 tests/rowWeightedMedians.R                     |    9 +
 tests/sumOver.R                                |    4 
 tests/varDiff_etal.R                           |   12 -
 tests/weightedMean.R                           |   27 ++++
 tests/x_OP_y.R                                 |   32 ++++
 82 files changed, 909 insertions(+), 349 deletions(-)

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New package hqreg with initial version 0.9
Package: hqreg
Type: Package
Title: Regularization Paths for Huber Loss Regression and Quantile Regression Penalized by Lasso or Elastic-Net
Version: 0.9
Date: 2015-06-18
Author: Congrui Yi
Maintainer: Congrui Yi <congrui-yi@uiowa.edu>
Description: Efficient algorithms for fitting entire regularization paths for Huber loss regression and quantile regression penalized by lasso or elastic-net.
License: GPL-2
Packaged: 2015-06-20 16:11:31 UTC; congrui
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-06-20 23:56:09

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Package cellranger updated to version 1.0.0 with previous version 0.1.0 dated 2015-04-22

Title: Translate Spreadsheet Cell Ranges to Rows and Columns
Description: Helper functions to work with spreadsheets and the "A1:D10" style of cell range specification.
Author: Jennifer Bryan [cre, aut], Hadley Wickham [ctb]
Maintainer: Jennifer Bryan <jenny@stat.ubc.ca>

Diff between cellranger versions 0.1.0 dated 2015-04-22 and 1.0.0 dated 2015-06-20

 DESCRIPTION                              |   10 +--
 MD5                                      |   26 +++----
 NAMESPACE                                |    1 
 R/anchor.R                               |   47 +++++++++-----
 R/cell-limits.R                          |   89 ++++++++++++++++-----------
 R/cell-rows-cell-cols.R                  |   28 ++++----
 R/utils.R                                |    3 
 README.md                                |   56 ++++++++++-------
 man/anchored.Rd                          |   26 ++++---
 man/as.range.Rd                          |    2 
 man/cell_cols.Rd                         |   10 +--
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 man/cell_rows.Rd                         |   14 ++--
 tests/testthat/test-cell-specification.R |  101 ++++++++++++++++++++-----------
 14 files changed, 275 insertions(+), 188 deletions(-)

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Package boa updated to version 1.1.8-1 with previous version 1.1.7-2 dated 2008-05-02

Title: Bayesian Output Analysis Program (BOA) for MCMC
Description: A menu-driven program and library of functions for carrying out convergence diagnostics and statistical and graphical analysis of Markov chain Monte Carlo sampling output.
Author: Brian J. Smith
Maintainer: Brian J. Smith <brian-j-smith@uiowa.edu>

Diff between boa versions 1.1.7-2 dated 2008-05-02 and 1.1.8-1 dated 2015-06-20

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 boa-1.1.8-1/boa/R/boa.core.R           |    2 +-
 boa-1.1.8-1/boa/R/boa.handw.R          |    4 +---
 boa-1.1.8-1/boa/R/boa.menu.parms.R     |    2 +-
 boa-1.1.8-1/boa/R/boa.randl.R          |    4 ++--
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 boa-1.1.8-1/boa/man/boa.plot.geweke.Rd |    4 +++-
 boa-1.1.8-1/boa/man/boa.print.randl.Rd |    3 ++-
 14 files changed, 35 insertions(+), 23 deletions(-)

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Package emdatr (with last version 0.3) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2015-05-04 0.3
2014-05-12 0.2
2013-11-22 0.1

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Package bayesm updated to version 3.0-2 with previous version 3.0-1 dated 2015-06-15

Title: Bayesian Inference for Marketing/Micro-Econometrics
Description: Covers many important models used in marketing and micro-econometrics applications. The package includes: Bayes Regression (univariate or multivariate dep var), Bayes Seemingly Unrelated Regression (SUR), Binary and Ordinal Probit, Multinomial Logit (MNL) and Multinomial Probit (MNP), Multivariate Probit, Negative Binomial (Poisson) Regression, Multivariate Mixtures of Normals (including clustering), Dirichlet Process Prior Density Estimation with normal base, Hierarchical Linear Models with normal prior and covariates, Hierarchical Linear Models with a mixture of normals prior and covariates, Hierarchical Multinomial Logits with a mixture of normals prior and covariates, Hierarchical Multinomial Logits with a Dirichlet Process prior and covariates, Hierarchical Negative Binomial Regression Models, Bayesian analysis of choice-based conjoint data, Bayesian treatment of linear instrumental variables models, Analysis of Multivariate Ordinal survey data with scale usage heterogeneity (as in Rossi et al, JASA (01)), Bayesian Analysis of Aggregate Random Coefficient Logit Models as in BLP (see Jiang, Manchanda, Rossi 2009) For further reference, consult our book, Bayesian Statistics and Marketing by Rossi, Allenby and McCulloch (Wiley 2005) and Bayesian Non- and Semi-Parametric Methods and Applications (Princeton U Press 2014).
Author: Peter Rossi <perossichi@gmail.com>
Maintainer: Peter Rossi <perossichi@gmail.com>

Diff between bayesm versions 3.0-1 dated 2015-06-15 and 3.0-2 dated 2015-06-20

 DESCRIPTION                   |    6 +++---
 MD5                           |   10 +++++-----
 src/lndIWishart_rcpp.cpp      |    2 +-
 src/lndMvst_rcpp.cpp          |    2 +-
 src/rscaleUsage_rcpp_loop.cpp |    4 ++--
 src/utilityFunctions.cpp      |    6 +++---
 6 files changed, 15 insertions(+), 15 deletions(-)

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