Title: Regression Analysis of Proportional Data Using Simplex
Distribution
Description: Simplex density, distribution, quantile functions as well as random variable
generation of the simplex distribution are given. Regression analysis of proportional data
using various kinds of simplex models is available. In addition, GEE method can be applied
to longitudinal data to model the correlation. Residual analysis is also involved. Some
subroutines are written in C with GNU Scientific Library (GSL) so as to facilitate the
computation.
Author: Peng Zhang, Zhengguo Qiu and Chengchun Shi
Maintainer: Peng Zhang <pengz@zju.edu.cn>
Diff between simplexreg versions 1.0 dated 2014-01-31 and 1.1 dated 2015-06-21
DESCRIPTION | 9 +++-- MD5 | 12 +++---- NAMESPACE | 3 + R/simplexgee.R | 18 +++++++---- R/simplexreg.R | 6 +++ src/Makevars | 4 +- src/sim.gee.cpp | 87 ++++++++++++++++++++++++++++---------------------------- 7 files changed, 76 insertions(+), 63 deletions(-)
More information about STMedianPolish at CRAN
Permanent link
Title: Interface to the Bird-Watching Dataset Proyecto AVIS
Description: Interface to <http://proyectoavis.com> database.
It provides means to download data filtered by species, order,
family, and several other criteria. Provides also basic functionality to
plot exploratory maps of the datasets.
Author: Javier González Hernández <javigzz@yahoo.es>, Sara Varela <svarela@paleobiogeography.org>
Maintainer: Sara Varela <svarela@paleobiogeography.org>
Diff between rAvis versions 0.1.3 dated 2015-06-18 and 0.1.4 dated 2015-06-21
rAvis-0.1.3/rAvis/tests/testthat |only rAvis-0.1.4/rAvis/DESCRIPTION | 8 +- rAvis-0.1.4/rAvis/MD5 | 40 +++++++------ rAvis-0.1.4/rAvis/R/apiClient.R |only rAvis-0.1.4/rAvis/R/loginFunctions.R | 2 rAvis-0.1.4/rAvis/R/remoteSpeciesDataFunctions.R | 20 +----- rAvis-0.1.4/rAvis/R/remoteUsersDataFunctions.R | 70 +---------------------- rAvis-0.1.4/rAvis/R/searchInterfaceFunctions.R | 41 +++++-------- rAvis-0.1.4/rAvis/tests/apitest |only rAvis-0.1.4/rAvis/tests/test-all.R | 11 ++- rAvis-0.1.4/rAvis/tests/testthat_disabled |only 11 files changed, 62 insertions(+), 130 deletions(-)
Title: Likelihood Inference in Meta-Analysis and Meta-Regression Models
Description: First- and higher-order likelihood inference in
meta-analysis and meta-regression models.
Author: Annamaria Guolo and Cristiano Varin
Maintainer: Cristiano Varin <sammy@unive.it>
Diff between metaLik versions 0.41.0 dated 2014-04-09 and 0.42.0 dated 2015-06-21
metaLik-0.41.0/metaLik/man/profile.metaLik.Rd |only metaLik-0.42.0/metaLik/DESCRIPTION | 11 - metaLik-0.42.0/metaLik/MD5 | 15 +- metaLik-0.42.0/metaLik/NAMESPACE | 2 metaLik-0.42.0/metaLik/NEWS | 6 + metaLik-0.42.0/metaLik/R/metaLik.R | 144 ++++---------------------- metaLik-0.42.0/metaLik/man/metaLik.Rd | 17 --- metaLik-0.42.0/metaLik/man/summary.metaLik.Rd | 4 metaLik-0.42.0/metaLik/man/test.metaLik.Rd | 6 - 9 files changed, 47 insertions(+), 158 deletions(-)
Title: Latent Variable Models
Description: Estimation and simulation of latent variable models.
Author: Klaus K. Holst
Maintainer: Klaus K. Holst <klaus@holst.it>
Diff between lava versions 1.4.0 dated 2015-02-17 and 1.4.1 dated 2015-06-21
DESCRIPTION | 8 MD5 | 115 ++-- NAMESPACE | 4 NEWS | 3 R/Objective.R | 4 R/addhook.R | 2 R/bootstrap.R | 6 R/coef.R | 280 +++++----- R/confint.R | 5 R/constrain.R | 5 R/covariance.R | 17 R/diagtest.R | 26 R/distribution.R | 8 R/dsort.R | 23 R/estimate.default.R | 61 +- R/estimate.lvm.R | 1287 +++++++++++++++++++++++------------------------ R/estimate.multigroup.R | 4 R/eventTime.R | 17 R/fix.R | 16 R/fplot.R |only R/glmest.R | 2 R/iid.R | 25 R/labels.R | 12 R/measurement.error.R |only R/normal.R | 9 R/onload.R | 14 R/plot.R | 6 R/plot.estimate.R |only R/regression.R | 41 - R/spaghetti.R | 6 R/stack.R | 64 -- R/transform.R | 2 R/utils.R | 3 R/zclick.R | 20 R/zconfband.R | 5 R/zksmooth.R | 32 - R/zplotConf.R | 14 inst/doc/reference.pdf |binary inst/gof1.png |binary inst/lava1.png |binary inst/me1.png |only man/bootstrap.lvm.Rd | 2 man/click.Rd | 16 man/confint.lvmfit.Rd | 4 man/constrain-set.Rd | 5 man/diagtest.Rd | 2 man/dsort.Rd | 4 man/estimate.default.Rd | 11 man/estimate.lvm.Rd | 6 man/eventTime.Rd | 2 man/fplot.Rd |only man/iid.Rd | 8 man/ksmooth2.Rd | 26 man/labels-set.Rd | 8 man/measurement.error.Rd | 14 man/plot.lvm.Rd | 4 man/plotConf.Rd | 5 man/regression-set.Rd | 2 man/spaghetti.Rd | 3 man/stack.estimate.Rd | 3 man/timedep.Rd | 7 61 files changed, 1184 insertions(+), 1094 deletions(-)
Title: An Import Mechanism for R
Description: This is an alternative mechanism for importing
objects from packages. The syntax allows for importing multiple objects
from a package with a single command in an expressive way. The import
package bridges some of the gap between using library (or require) and
direct (single-object) imports. Furthermore the imported objects are not
placed in the current environment. It is also possible to import
objects from stand-alone .R files. For more information, refer to
the package vignette.
Author: Stefan Milton Bache
Maintainer: Stefan Milton Bache <stefan@stefanbache.dk>
Diff between import versions 1.0.2 dated 2015-04-09 and 1.1.0 dated 2015-06-21
DESCRIPTION | 12 ++- MD5 | 38 +++++++---- NAMESPACE | 2 NEWS | 9 ++ R/from.R |only R/here.R |only R/import.R | 147 --------------------------------------------- R/into.R |only R/is_script.R |only R/modified.R |only R/scripts.R |only R/suppress_output.R |only R/symbol_as_character.R | 6 - R/zzz.R | 2 README | 84 ++++++------------------- build |only inst |only man/import.Rd | 2 man/importfunctions.Rd | 22 ++++-- man/make_import_call.Rd | 2 man/symbol_as_character.Rd | 2 man/symbol_list.Rd | 2 vignettes |only 23 files changed, 89 insertions(+), 241 deletions(-)
Title: Bootstrap on Classical Biplots and Clustering Disjoint Biplot
Description: A GUI with which the user can construct and interact with Bootstrap methods on Classical Biplots and with Clustering and/or Disjoint Biplot.
Author: Ana Belen Nieto Librero<ananieto@usal.es>, Purificacion Galindo Villardon<pgalindo@usal.es>
Maintainer: Ana Belen Nieto Librero <ananieto@usal.es>
Diff between biplotbootGUI versions 1.0 dated 2013-12-31 and 1.1 dated 2015-06-21
biplotbootGUI-1.0/biplotbootGUI/R/biplotbootGUI-internal.R |only biplotbootGUI-1.1/biplotbootGUI/DESCRIPTION | 22 biplotbootGUI-1.1/biplotbootGUI/MD5 | 13 biplotbootGUI-1.1/biplotbootGUI/NAMESPACE | 19 biplotbootGUI-1.1/biplotbootGUI/R/CDBiplot.R |only biplotbootGUI-1.1/biplotbootGUI/R/biplotboot.R | 6548 +++++------ biplotbootGUI-1.1/biplotbootGUI/man/CDBiplot.Rd |only biplotbootGUI-1.1/biplotbootGUI/man/biplotboot.Rd | 149 biplotbootGUI-1.1/biplotbootGUI/man/biplotbootGUI-package.Rd | 90 9 files changed, 3535 insertions(+), 3306 deletions(-)
Title: Routines for Fitting Kinetic Models with One or More State
Variables to Chemical Degradation Data
Description: Calculation routines based on the FOCUS Kinetics Report (2006).
Includes a function for conveniently defining differential equation models,
model solution based on eigenvalues if possible or using numerical solvers
and a choice of the optimisation methods made available by the 'FME' package.
If a C compiler (on windows: 'Rtools') is installed, differential
equation models are solved using compiled C functions.
Please note that no warranty is implied for correctness of results or fitness
for a particular purpose.
Author: Johannes Ranke [aut, cre, cph],
Katrin Lindenberger [ctb],
René Lehmann [ctb],
Eurofins Regulatory AG [cph]
Maintainer: Johannes Ranke <jranke@uni-bremen.de>
Diff between mkin versions 0.9-35 dated 2015-05-15 and 0.9-36 dated 2015-06-21
DESCRIPTION | 14 MD5 | 93 +- NAMESPACE | 5 NEWS | 22 R/IORE.solution.R | 4 R/endpoints.R | 2 R/mkinerrmin.R | 6 R/mkinfit.R | 125 ++- R/mkinmod.R | 83 ++ R/mkinpredict.R | 62 + R/transform_odeparms.R | 12 README.md | 96 ++ build/vignette.rds |binary inst/doc/FOCUS_D.R |only inst/doc/FOCUS_D.Rmd |only inst/doc/FOCUS_D.html |only inst/doc/FOCUS_L.html | 330 +++++----- inst/doc/FOCUS_Z.Rnw | 2 inst/doc/FOCUS_Z.pdf |binary inst/doc/compiled_models.R |only inst/doc/compiled_models.Rmd |only inst/doc/compiled_models.html |only inst/doc/mkin.pdf |binary inst/staticdocs/README | 2 man/IORE.solution.Rd | 4 man/mkinfit.Rd | 46 - man/mkinmod.Rd | 25 man/mkinpredict.Rd | 24 man/synthetic_data_for_UBA.Rd | 2 man/transform_odeparms.Rd | 8 tests/testthat.R | 4 tests/testthat/test_FOCUS_D_UBA_expertise.R | 32 tests/testthat/test_FOCUS_chi2_error_level.R | 2 tests/testthat/test_mkinpredict_SFO_SFO.R | 4 tests/testthat/test_schaefer07_complex_case.R | 2 tests/testthat/test_synthetic_data_for_UBA_2014.R | 15 vignettes/FOCUS_D.Rmd |only vignettes/FOCUS_Z.Rnw | 2 vignettes/FOCUS_Z.fdb_latexmk |only vignettes/FOCUS_Z.fls |only vignettes/compiled_models.Rmd |only vignettes/compiled_models_cache/html/benchmark_FOMC_SFO_101fecfdff46216fe1f33d51e3a46470.RData |binary vignettes/compiled_models_cache/html/benchmark_FOMC_SFO_101fecfdff46216fe1f33d51e3a46470.rdb |binary vignettes/compiled_models_cache/html/benchmark_FOMC_SFO_101fecfdff46216fe1f33d51e3a46470.rdx |binary vignettes/compiled_models_cache/html/benchmark_SFO_SFO_c67508532843e0f19735d63034f79cc2.RData |binary vignettes/compiled_models_cache/html/benchmark_SFO_SFO_c67508532843e0f19735d63034f79cc2.rdb |binary vignettes/compiled_models_cache/html/benchmark_SFO_SFO_c67508532843e0f19735d63034f79cc2.rdx |binary vignettes/compiled_models_cache/html/create_SFO_SFO_e1bc636fa6683157ac064f4e09a81368.RData |binary vignettes/compiled_models_cache/html/create_SFO_SFO_e1bc636fa6683157ac064f4e09a81368.rdb |binary vignettes/compiled_models_cache/html/create_SFO_SFO_e1bc636fa6683157ac064f4e09a81368.rdx |binary vignettes/compiled_models_cache/html/unnamed-chunk-2_3dae0ff3076a934b8fe5a08561e07f97.RData |binary vignettes/compiled_models_cache/html/unnamed-chunk-2_3dae0ff3076a934b8fe5a08561e07f97.rdx |binary vignettes/mkin_vignettes.css |only 53 files changed, 684 insertions(+), 344 deletions(-)
Title: HTML Widgets for R
Description: A framework for creating HTML widgets that render in various
contexts including the R console, 'R Markdown' documents, and 'Shiny'
web applications.
Author: Ramnath Vaidyanathan [aut, cph],
Yihui Xie [aut],
JJ Allaire [aut, cre],
Joe Cheng [aut],
Kenton Russell [aut, cph],
RStudio [cph]
Maintainer: JJ Allaire <jj@rstudio.com>
Diff between htmlwidgets versions 0.4 dated 2015-05-18 and 0.5 dated 2015-06-21
htmlwidgets-0.4/htmlwidgets/inst/doc/htmlwidgets-advanced.R |only htmlwidgets-0.4/htmlwidgets/inst/doc/htmlwidgets-advanced.Rmd |only htmlwidgets-0.4/htmlwidgets/inst/doc/htmlwidgets-advanced.html |only htmlwidgets-0.4/htmlwidgets/inst/doc/htmlwidgets-intro.Rmd |only htmlwidgets-0.4/htmlwidgets/inst/doc/htmlwidgets-intro.html |only htmlwidgets-0.4/htmlwidgets/inst/doc/htmlwidgets-sizing.Rmd |only htmlwidgets-0.4/htmlwidgets/inst/doc/htmlwidgets-sizing.html |only htmlwidgets-0.4/htmlwidgets/vignettes/htmlwidgets-advanced.Rmd |only htmlwidgets-0.4/htmlwidgets/vignettes/htmlwidgets-intro.Rmd |only htmlwidgets-0.4/htmlwidgets/vignettes/htmlwidgets-sizing.Rmd |only htmlwidgets-0.5/htmlwidgets/DESCRIPTION | 12 ++- htmlwidgets-0.5/htmlwidgets/MD5 | 35 +++++----- htmlwidgets-0.5/htmlwidgets/NEWS | 15 ++++ htmlwidgets-0.5/htmlwidgets/R/htmlwidgets.R | 13 ++- htmlwidgets-0.5/htmlwidgets/R/savewidget.R | 5 - htmlwidgets-0.5/htmlwidgets/build/vignette.rds |binary htmlwidgets-0.5/htmlwidgets/inst/doc/develop_advanced.R |only htmlwidgets-0.5/htmlwidgets/inst/doc/develop_advanced.Rmd |only htmlwidgets-0.5/htmlwidgets/inst/doc/develop_advanced.html |only htmlwidgets-0.5/htmlwidgets/inst/doc/develop_intro.R |only htmlwidgets-0.5/htmlwidgets/inst/doc/develop_intro.Rmd |only htmlwidgets-0.5/htmlwidgets/inst/doc/develop_intro.html |only htmlwidgets-0.5/htmlwidgets/inst/doc/develop_sizing.Rmd |only htmlwidgets-0.5/htmlwidgets/inst/doc/develop_sizing.html |only htmlwidgets-0.5/htmlwidgets/inst/www/htmlwidgets.js | 23 ++++-- htmlwidgets-0.5/htmlwidgets/man/saveWidget.Rd | 7 +- htmlwidgets-0.5/htmlwidgets/vignettes/develop_advanced.Rmd |only htmlwidgets-0.5/htmlwidgets/vignettes/develop_intro.Rmd |only htmlwidgets-0.5/htmlwidgets/vignettes/develop_sizing.Rmd |only 29 files changed, 74 insertions(+), 36 deletions(-)
Title: A Convex Formulation for Modeling Interactions with Strong
Heredity
Description: Fits penalized linear and logistic regression models with pairwise interaction terms.
Author: Asad Haris
Maintainer: Asad Haris <aharis@uw.edu>
Diff between FAMILY versions 0.1.18 dated 2014-11-04 and 0.1.19 dated 2015-06-21
FAMILY-0.1.18/FAMILY/R/ADMM_0.1.17.R |only FAMILY-0.1.19/FAMILY/DESCRIPTION | 8 ++++---- FAMILY-0.1.19/FAMILY/MD5 | 12 ++++++------ FAMILY-0.1.19/FAMILY/NAMESPACE | 2 +- FAMILY-0.1.19/FAMILY/R/ADMM_0.1.19.R |only FAMILY-0.1.19/FAMILY/R/ef_1.R | 13 +++++++++++++ FAMILY-0.1.19/FAMILY/man/FAMILY-package.Rd | 6 +++--- FAMILY-0.1.19/FAMILY/man/FAMILY.Rd | 18 ++++++++++-------- 8 files changed, 37 insertions(+), 22 deletions(-)
Title: Canonical Non-Symmetrical Correspondence Analysis in R
Description: A GUI with which users can construct and interact
with Canonical Correspondence Analysis and Canonical Non-Symmetrical Correspondence Analysis and provides inferential results by using Bootstrap Methods.
Author: Ana Belen Nieto Librero <ananieto@usal.es>, Priscila Willems
<pwillems@bariloche.inta.gov.ar>, Purificacion Galindo
Villardon <pgalindo@usal.es>
Maintainer: Ana Belen Nieto Librero <ananieto@usal.es>
Diff between cncaGUI versions 0.0-2 dated 2012-07-18 and 1.0 dated 2015-06-21
cncaGUI-0.0-2/cncaGUI/ChangeLog |only cncaGUI-0.0-2/cncaGUI/cncaGUI-Ex.R |only cncaGUI-1.0/cncaGUI/DESCRIPTION | 22 cncaGUI-1.0/cncaGUI/MD5 | 16 cncaGUI-1.0/cncaGUI/NAMESPACE | 34 cncaGUI-1.0/cncaGUI/R/cnca.R | 6462 +++++++++++++++++++---------- cncaGUI-1.0/cncaGUI/man/cnca.Rd | 183 cncaGUI-1.0/cncaGUI/man/cncaGUI-package.Rd | 59 cncaGUI-1.0/cncaGUI/man/especies.Rd | 43 cncaGUI-1.0/cncaGUI/man/variables.Rd | 40 10 files changed, 4626 insertions(+), 2233 deletions(-)