Title: Bayesian Non- and Semi-Parametric Model Fitting
Description: Markov chain Monte Carlo algorithms for non- and semi-parametric models.
Author: Georgios Papageorgiou
Maintainer: Georgios Papageorgiou <gpapageo@gmail.com>
Diff between BNSP versions 1.0.3 dated 2015-06-08 and 1.0.4 dated 2015-06-23
ChangeLog | 10 +- DESCRIPTION | 8 - MD5 | 19 ++-- R/bnpglm.R | 18 +-- R/bnpglmf.R |only man/bnpglm.Rd | 11 +- src/OneResLtnt.c | 129 ++++++++++++++++++--------- src/SpecOneRL.h | 233 +++++++++++++++++++++++++++++++++++++++++++++++++- src/other.functions.h | 145 +++++++++++++++++++++++++++++-- src/pdfs.h | 46 +++++++++ src/sampling.h | 4 11 files changed, 535 insertions(+), 88 deletions(-)
Title: Capture-Mark-Recapture Analysis using Multiple Non-Invasive
Marks
Description: Capture-mark-recapture analysis with multiple non-invasive marks. The models implemented in 'multimark' combine encounter history data arising from two different non-invasive ``marks'', such as images of left-sided and right-sided pelage patterns of bilaterally asymmetrical species, to estimate abundance and related demographic parameters while accounting for imperfect detection. Bayesian models are specified using simple formulae and fitted using Markov chain Monte Carlo.
Author: Brett T. McClintock [aut, cre],
Acho Arnold [ctb, cph] (C original matrix library,
https://github.com/najela/matrix.h),
Barry Brown [ctb] (Fortran original ranlib library),
James Lovato [ctb] (Fortran original ranlib library),
John Burkardt [ctb] (C original ranlib library,
http://people.sc.fsu.edu/~jburkardt/c_src/ranlib),
Cleve Moler [ctb] (C original linpack library,
http://www.kkant.net/geist/ranlib/)
Maintainer: Brett T. McClintock <brett.mcclintock@noaa.gov>
Diff between multimark versions 1.1.4 dated 2015-05-05 and 1.2.0 dated 2015-06-23
DESCRIPTION | 10 +++--- MD5 | 22 ++++++------- NEWS | 15 +++++++++ R/CJS.R | 77 ++++++++++++++++++++++++++++-------------------- R/Closed.R | 75 ++++++++++++++++++++++++++++------------------ R/multimark_functions.R | 4 +- man/multimarkCJS.Rd | 12 ++++--- man/multimarkClosed.Rd | 12 ++++--- man/multimodelCJS.Rd | 13 +++++--- man/multimodelClosed.Rd | 10 ++++-- src/Closed.c | 13 ++++---- src/ProbitCJS.c | 18 +++++------ 12 files changed, 172 insertions(+), 109 deletions(-)
Title: Calculate Cluster-Robust p-Values and Confidence Intervals
Description: Calculate p-values and confidence intervals using cluster-adjusted t-statistics (based on Ibragimov and Muller 2010, Journal of Business and Economic Statistics 28(4)), pairs cluster bootstrapped t-statistics, and wild cluster bootstrapped t-statistics (the latter two techniques based on Cameron, Gelbach, and Miller 2008, Review of Economics and Statistics 90(3)). Procedures are included for use with GLM, ivreg, plm (fixed effects), and mlogit models.
Author: Justin Esarey [aut, cre]
Maintainer: Justin Esarey <justin@justinesarey.com>
Diff between clusterSEs versions 1.2 dated 2015-03-11 and 2.0 dated 2015-06-23
clusterSEs-1.2/clusterSEs/R/clusterBS.R |only clusterSEs-1.2/clusterSEs/R/clusterBSmlogit.R |only clusterSEs-1.2/clusterSEs/R/clusterIM.R |only clusterSEs-1.2/clusterSEs/R/clusterIMmlogit.R |only clusterSEs-1.2/clusterSEs/R/clusterwild.R |only clusterSEs-1.2/clusterSEs/man/cluster.bs.Rd |only clusterSEs-1.2/clusterSEs/man/cluster.im.Rd |only clusterSEs-1.2/clusterSEs/man/cluster.wild.Rd |only clusterSEs-2.0/clusterSEs/DESCRIPTION | 13 ++-- clusterSEs-2.0/clusterSEs/MD5 | 34 +++++++---- clusterSEs-2.0/clusterSEs/NAMESPACE | 33 +++++++++-- clusterSEs-2.0/clusterSEs/R/clusterBS.glm.R |only clusterSEs-2.0/clusterSEs/R/clusterBS.ivreg.R |only clusterSEs-2.0/clusterSEs/R/clusterBS.mlogit.R |only clusterSEs-2.0/clusterSEs/R/clusterBS.plm.R |only clusterSEs-2.0/clusterSEs/R/clusterIM.glm.R |only clusterSEs-2.0/clusterSEs/R/clusterIM.ivreg.R |only clusterSEs-2.0/clusterSEs/R/clusterIM.mlogit.R |only clusterSEs-2.0/clusterSEs/R/clusterwild.glm.R |only clusterSEs-2.0/clusterSEs/R/clusterwild.ivreg.R |only clusterSEs-2.0/clusterSEs/R/clusterwild.plm.R |only clusterSEs-2.0/clusterSEs/man/cluster.bs.glm.Rd |only clusterSEs-2.0/clusterSEs/man/cluster.bs.ivreg.Rd |only clusterSEs-2.0/clusterSEs/man/cluster.bs.mlogit.Rd | 58 ++++++++++++-------- clusterSEs-2.0/clusterSEs/man/cluster.bs.plm.Rd |only clusterSEs-2.0/clusterSEs/man/cluster.im.glm.Rd |only clusterSEs-2.0/clusterSEs/man/cluster.im.ivreg.Rd |only clusterSEs-2.0/clusterSEs/man/cluster.im.mlogit.Rd | 35 ++++-------- clusterSEs-2.0/clusterSEs/man/cluster.wild.glm.Rd |only clusterSEs-2.0/clusterSEs/man/cluster.wild.ivreg.Rd |only clusterSEs-2.0/clusterSEs/man/cluster.wild.plm.Rd |only 31 files changed, 106 insertions(+), 67 deletions(-)
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Title: Bayesian Sparse Group Selection
Description: The integration of Bayesian variable and sparse group variable selection approaches for regression models.
Author: Kuo-Jung Lee and Ray-Bin Chen
Maintainer: Kuo-Jung Lee <kuojunglee@mail.ncku.edu.tw>
Diff between BSGS versions 1.0 dated 2015-02-13 and 2.0 dated 2015-06-23
BSGS-1.0/BSGS/R/BSGS.r |only BSGS-1.0/BSGS/man/BSGS.Rd |only BSGS-2.0/BSGS/DESCRIPTION | 10 - BSGS-2.0/BSGS/MD5 | 30 ++- BSGS-2.0/BSGS/NAMESPACE | 6 BSGS-2.0/BSGS/R/BSGS.PE.r |only BSGS-2.0/BSGS/R/BSGS.Sample.r |only BSGS-2.0/BSGS/R/BSGS.Simple.r | 260 ++++++++++++++----------------- BSGS-2.0/BSGS/R/CGS.SMP.PE.r |only BSGS-2.0/BSGS/R/CompWiseGibbs.r | 49 +++-- BSGS-2.0/BSGS/R/CompWiseGibbs_SMP.r | 39 ++-- BSGS-2.0/BSGS/man/BSGS.PE.Rd |only BSGS-2.0/BSGS/man/BSGS.Sample.Rd |only BSGS-2.0/BSGS/man/BSGS.Simple.Rd | 87 +++++----- BSGS-2.0/BSGS/man/CGS.SMP.PE.Rd |only BSGS-2.0/BSGS/man/CompWiseGibbsSMP.Rd | 13 - BSGS-2.0/BSGS/man/CompWiseGibbsSimple.Rd | 18 +- BSGS-2.0/BSGS/man/Crisis2008.Rd | 2 BSGS-2.0/BSGS/man/MSE.BSGS.Rd |only BSGS-2.0/BSGS/man/MSE.CGS.SMP.Rd |only BSGS-2.0/BSGS/man/TCR.TPR.FPR.BSGS.Rd |only BSGS-2.0/BSGS/man/TCR.TPR.FPR.CGS.SMP.Rd |only 22 files changed, 258 insertions(+), 256 deletions(-)
Title: R Interface to W3C Markup Validation Services
Description:
R interface to a W3C Markup Validation service.
See <http://validator.w3.org/> for more information.
Author: Kurt Hornik [aut, cre]
Maintainer: Kurt Hornik <Kurt.Hornik@R-project.org>
Diff between W3CMarkupValidator versions 0.1-2 dated 2015-05-02 and 0.1-3 dated 2015-06-23
DESCRIPTION | 7 ++++--- MD5 | 6 +++--- man/w3c_markup_validate.Rd | 10 +++++++--- man/w3c_markup_validate_db.Rd | 37 ++++++++++++++++++++----------------- 4 files changed, 34 insertions(+), 26 deletions(-)
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Title: Renewal Method for Extreme Values Extrapolation
Description: Peaks Over Threshold (POT) or 'methode du renouvellement'. The distribution for the exceedances can be chosen, and heterogeneous data (including historical data or block data) can be used in a Maximum-Likelihood framework.
Author: Yves Deville <deville.yves@alpestat.com>, IRSN <renext@irsn.fr>
Maintainer: Lise Bardet <lise.bardet@irsn.fr>
Diff between Renext versions 2.1-10 dated 2015-04-28 and 3.0-0 dated 2015-06-23
Renext-2.1-10/Renext/R/Renouv3.R |only Renext-2.1-10/Renext/R/rRenouv.R |only Renext-2.1-10/Renext/inst/doc/RenextGuide.R |only Renext-2.1-10/Renext/man/rRenouv.Rd |only Renext-3.0-0/Renext/ChangeLog | 353 +++++++ Renext-3.0-0/Renext/DESCRIPTION | 12 Renext-3.0-0/Renext/MD5 | 185 ++-- Renext-3.0-0/Renext/NAMESPACE | 35 Renext-3.0-0/Renext/R/CV2.R |only Renext-3.0-0/Renext/R/GPD.R |only Renext-3.0-0/Renext/R/GreenwoodUtils.R |only Renext-3.0-0/Renext/R/Hpoints.R |only Renext-3.0-0/Renext/R/Jackson.R |only Renext-3.0-0/Renext/R/LR.R |only Renext-3.0-0/Renext/R/LomaxGpd.R |only Renext-3.0-0/Renext/R/NBlevy.R | 1 Renext-3.0-0/Renext/R/OT2MAX.R |only Renext-3.0-0/Renext/R/PPandQQ.R |only Renext-3.0-0/Renext/R/RLplot.R | 404 +++++--- Renext-3.0-0/Renext/R/Ren2gev.R |only Renext-3.0-0/Renext/R/Ren2gumbel.R |only Renext-3.0-0/Renext/R/Rendata.R | 872 ++++++++++-------- Renext-3.0-0/Renext/R/Renouv4.R |only Renext-3.0-0/Renext/R/RenouvMethods.R | 173 +-- Renext-3.0-0/Renext/R/RenouvNoEst.R | 98 +- Renext-3.0-0/Renext/R/SandT.R |only Renext-3.0-0/Renext/R/anova.Renouv.R |only Renext-3.0-0/Renext/R/fGEV.MAX.R |only Renext-3.0-0/Renext/R/fML.R | 492 +++++----- Renext-3.0-0/Renext/R/fgamma.R | 17 Renext-3.0-0/Renext/R/fgpd.R | 88 + Renext-3.0-0/Renext/R/flomax.R | 389 ++++---- Renext-3.0-0/Renext/R/fmaxlo.R | 458 +++++---- Renext-3.0-0/Renext/R/fweibull.R | 33 Renext-3.0-0/Renext/R/gof.date.R | 595 ++++++------ Renext-3.0-0/Renext/R/iniMAXOTS.R |only Renext-3.0-0/Renext/R/interevt.R | 379 ++++---- Renext-3.0-0/Renext/R/makeFuns.R | 8 Renext-3.0-0/Renext/R/miscutils.R | 174 +++ Renext-3.0-0/Renext/R/mixexp2.R | 18 Renext-3.0-0/Renext/R/parDeriv.R |only Renext-3.0-0/Renext/R/plot.Renouv.R | 1062 +++++++++++------------ Renext-3.0-0/Renext/R/predict.Renouv.R | 394 ++++---- Renext-3.0-0/Renext/R/randomRendata.R |only Renext-3.0-0/Renext/R/readXML.R | 717 ++++++++++----- Renext-3.0-0/Renext/R/spacings.R |only Renext-3.0-0/Renext/R/sysdata.rda |only Renext-3.0-0/Renext/R/transexp.R | 1 Renext-3.0-0/Renext/R/weibplot.R | 203 ++-- Renext-3.0-0/Renext/R/zzz.R |only Renext-3.0-0/Renext/data/Brest.rda |binary Renext-3.0-0/Renext/data/Brest.years.missing.rda |binary Renext-3.0-0/Renext/data/Brest.years.rda |binary Renext-3.0-0/Renext/data/Dunkerque.rda |binary Renext-3.0-0/Renext/data/Garonne.rda |binary Renext-3.0-0/Renext/inst/doc/RenextGuide.pdf |binary Renext-3.0-0/Renext/inst/doc/index.html |only Renext-3.0-0/Renext/man/Brest.Rd | 54 - Renext-3.0-0/Renext/man/Brest.years.missing.Rd | 14 Renext-3.0-0/Renext/man/CV2.Rd |only Renext-3.0-0/Renext/man/CV2.test.Rd |only Renext-3.0-0/Renext/man/Dunkerque.Rd | 10 Renext-3.0-0/Renext/man/EM.mixexp.Rd | 81 + Renext-3.0-0/Renext/man/GPD.Rd |only Renext-3.0-0/Renext/man/Garonne.Rd | 6 Renext-3.0-0/Renext/man/Hpoints.Rd |only Renext-3.0-0/Renext/man/Jackson.Rd |only Renext-3.0-0/Renext/man/Jackson.test.Rd |only Renext-3.0-0/Renext/man/LRExp.Rd |only Renext-3.0-0/Renext/man/LRExp.test.Rd |only Renext-3.0-0/Renext/man/LRGumbel.Rd |only Renext-3.0-0/Renext/man/LRGumbel.test.Rd |only Renext-3.0-0/Renext/man/Lomax.Rd | 11 Renext-3.0-0/Renext/man/Maxlo.Rd | 9 Renext-3.0-0/Renext/man/MixExp2.Rd | 90 + Renext-3.0-0/Renext/man/NBlevy.Rd | 26 Renext-3.0-0/Renext/man/OT2MAX.Rd |only Renext-3.0-0/Renext/man/PPplot.Rd |only Renext-3.0-0/Renext/man/RLlegend.Rd | 84 + Renext-3.0-0/Renext/man/RLpar.Rd | 65 - Renext-3.0-0/Renext/man/RLplot.Rd | 128 +- Renext-3.0-0/Renext/man/Ren2gev.Rd |only Renext-3.0-0/Renext/man/Ren2gumbel.Rd |only Renext-3.0-0/Renext/man/Renext-package.Rd | 118 +- Renext-3.0-0/Renext/man/Renouv.Rd | 533 ++++++++--- Renext-3.0-0/Renext/man/RenouvNoEst.Rd | 2 Renext-3.0-0/Renext/man/SLTW.Rd | 98 +- Renext-3.0-0/Renext/man/SandT.Rd |only Renext-3.0-0/Renext/man/anova.Renouv.Rd |only Renext-3.0-0/Renext/man/barplotRenouv.Rd | 145 ++- Renext-3.0-0/Renext/man/expplot.Rd | 86 + Renext-3.0-0/Renext/man/fGEV.MAX.Rd |only Renext-3.0-0/Renext/man/fGPD.Rd |only Renext-3.0-0/Renext/man/fgamma.Rd | 82 + Renext-3.0-0/Renext/man/flomax.Rd | 138 ++ Renext-3.0-0/Renext/man/fmaxlo.Rd | 158 ++- Renext-3.0-0/Renext/man/fweibull.Rd | 104 +- Renext-3.0-0/Renext/man/gev2Ren.Rd |only Renext-3.0-0/Renext/man/gof.date.Rd | 181 ++- Renext-3.0-0/Renext/man/gofExp.test.Rd | 35 Renext-3.0-0/Renext/man/gumbel2Ren.Rd |only Renext-3.0-0/Renext/man/ini.mixexp2.Rd | 92 + Renext-3.0-0/Renext/man/iniMAX.Rd |only Renext-3.0-0/Renext/man/interevt.Rd | 114 +- Renext-3.0-0/Renext/man/logLik.Renouv.Rd | 30 Renext-3.0-0/Renext/man/mom.mixexp2.Rd | 66 + Renext-3.0-0/Renext/man/pGreenwood1.Rd |only Renext-3.0-0/Renext/man/parDeriv.Rd |only Renext-3.0-0/Renext/man/plot.Rendata.Rd | 73 + Renext-3.0-0/Renext/man/plot.Renouv.Rd | 278 +++--- Renext-3.0-0/Renext/man/predict.Renouv.Rd | 91 + Renext-3.0-0/Renext/man/qStat.Rd |only Renext-3.0-0/Renext/man/rRendata.Rd |only Renext-3.0-0/Renext/man/readXML.Rd | 125 ++ Renext-3.0-0/Renext/man/skip2noskip.Rd | 68 + Renext-3.0-0/Renext/man/spacings.Rd |only Renext-3.0-0/Renext/man/summary.Rendata.Rd | 28 Renext-3.0-0/Renext/man/summary.Renouv.Rd | 100 +- Renext-3.0-0/Renext/man/translude.Rd |only Renext-3.0-0/Renext/man/vcov.Renouv.Rd | 94 +- 120 files changed, 6547 insertions(+), 4031 deletions(-)
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Title: Get Hourly Meteorological Data from Global Stations
Description: Selectively acquire hourly meteorological data from stations located all over the world.
Author: Richard Iannone [aut, cre]
Maintainer: Richard Iannone <riannone@me.com>
Diff between stationaRy versions 0.2 dated 2015-06-17 and 0.3 dated 2015-06-23
stationaRy-0.2/stationaRy/R/get_ncdc_station_data.R |only stationaRy-0.2/stationaRy/R/get_ncdc_station_info.R |only stationaRy-0.2/stationaRy/R/get_tz_offset.R |only stationaRy-0.2/stationaRy/R/select_ncdc_station.R |only stationaRy-0.2/stationaRy/inst/time_zones.rda |only stationaRy-0.2/stationaRy/man/get_ncdc_station_data.Rd |only stationaRy-0.2/stationaRy/man/get_ncdc_station_info.Rd |only stationaRy-0.2/stationaRy/man/get_tz_offset.Rd |only stationaRy-0.2/stationaRy/man/select_ncdc_station.Rd |only stationaRy-0.3/stationaRy/DESCRIPTION | 12 stationaRy-0.3/stationaRy/MD5 | 22 - stationaRy-0.3/stationaRy/NAMESPACE | 12 stationaRy-0.3/stationaRy/R/get_isd_station_data.R |only stationaRy-0.3/stationaRy/R/get_isd_stations.R |only stationaRy-0.3/stationaRy/R/select_isd_station.R |only stationaRy-0.3/stationaRy/README.md | 243 ++++++++++------- stationaRy-0.3/stationaRy/inst/stations.rda |only stationaRy-0.3/stationaRy/man/get_isd_station_data.Rd |only stationaRy-0.3/stationaRy/man/get_isd_stations.Rd |only stationaRy-0.3/stationaRy/man/select_isd_station.Rd |only 20 files changed, 169 insertions(+), 120 deletions(-)
Title: Sample Size Adjusted for Nonadherence or Variability of Input
Parameters
Description: A set of functions to calculate sample size for two-sample difference in means tests. Does adjustments for either nonadherence or variability that comes from using data to estimate parameters.
Author: Michael P. Fay <mfay@niaid.nih.gov>
Maintainer: Michael P. Fay <mfay@niaid.nih.gov>
Diff between ssanv versions 1.0-2 dated 2010-02-12 and 1.1 dated 2015-06-23
ChangeLog | 5 +++++ DESCRIPTION | 24 +++++++++++------------- MD5 |only NAMESPACE |only R/uniroot.integer.R | 38 +++++++++++++++++++++++++++++++------- data/example.of.Fisher.exact.rda |binary man/ssanv.package.Rd | 8 ++++---- man/uniroot.integer.Rd | 13 ++++++------- tests |only 9 files changed, 57 insertions(+), 31 deletions(-)
Title: Manipulations of Triangular Meshes Based on the 'VCGLIB' API
Description: Operations on triangular meshes based on 'VCGLIB'. This package
integrates nicely with the R-package 'rgl' to render the meshes processed
by 'Rvcg'. The Visualization and Computer Graphics Library (VCG for short) is
an open source portable C++ templated library for manipulation, processing
and displaying with OpenGL of triangle and tetrahedral meshes. The library,
composed by more than 100k lines of code, is released under the GPL
license, and it is the base of most of the software tools of the Visual
Computing Lab of the Italian National Research Council Institute ISTI
(http://vcg.isti.cnr.it), like 'metro' and 'MeshLab'.
The 'VCGLIB' source is pulled from
trunk (svn://svn.code.sf.net/p/vcg/code/trunk/vcglib) and patched to work
with options determined by the configure script as well as
to work with the header files included by 'RcppEigen'.
Author: Stefan Schlager; the authors of VCGLIB for the included version of the
code
Maintainer: Stefan Schlager <zarquon42@gmail.com>
Diff between Rvcg versions 0.11 dated 2015-04-14 and 0.12.1 dated 2015-06-23
Rvcg-0.11/Rvcg/README.md |only Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/parametrization/poisson_solver.h.rej |only Rvcg-0.11/Rvcg/src/vcglib/vcg/complex/algorithms/update/curvature.h.rej |only Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/grid_util.h.rej |only Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/kdtree/kdtree.h.rej |only Rvcg-0.11/Rvcg/src/vcglib/vcg/space/index/kdtree/priorityqueue.h.rej |only Rvcg-0.12.1/Rvcg/DESCRIPTION | 22 Rvcg-0.12.1/Rvcg/MD5 | 125 Rvcg-0.12.1/Rvcg/NAMESPACE | 2 Rvcg-0.12.1/Rvcg/R/Rvcg-package.R | 4 Rvcg-0.12.1/Rvcg/R/vcgClean.r | 69 Rvcg-0.12.1/Rvcg/R/vcgIsosurface.r | 11 Rvcg-0.12.1/Rvcg/R/vcgKDtree.r | 2 Rvcg-0.12.1/Rvcg/R/vcgOneRingArea.r |only Rvcg-0.12.1/Rvcg/R/vcgQEdecim.r | 2 Rvcg-0.12.1/Rvcg/inst/NEWS.Rd | 17 Rvcg-0.12.1/Rvcg/man/Rvcg-package.Rd | 6 Rvcg-0.12.1/Rvcg/man/dummyhead.Rd | 2 Rvcg-0.12.1/Rvcg/man/humface.Rd | 2 Rvcg-0.12.1/Rvcg/man/meshintegrity.Rd | 2 Rvcg-0.12.1/Rvcg/man/setRays.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgBary.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgBorder.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgClean.Rd | 6 Rvcg-0.12.1/Rvcg/man/vcgClost.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgClostKD.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgCurve.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgGetEdge.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgImport.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgIsolated.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgIsosurface.Rd | 7 Rvcg-0.12.1/Rvcg/man/vcgKDtree.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgMeshres.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgNonBorderEdge.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgPlyRead.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgPlyWrite.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgQEdecim.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgRaySearch.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgSample.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgSmooth.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgStlWrite.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgUniformRemesh.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgUpdateNormals.Rd | 2 Rvcg-0.12.1/Rvcg/man/vcgVFadj.Rd | 2 Rvcg-0.12.1/Rvcg/src/Makevars.in | 2 Rvcg-0.12.1/Rvcg/src/Makevars.win | 2 Rvcg-0.12.1/Rvcg/src/ROneRing.cpp |only Rvcg-0.12.1/Rvcg/src/Rmarch.cpp | 9 Rvcg-0.12.1/Rvcg/src/vcglib/vcg/complex/algorithms/create/platonic.h | 25 Rvcg-0.12.1/Rvcg/src/vcglib/vcg/complex/algorithms/geodesic.h | 16 Rvcg-0.12.1/Rvcg/src/vcglib/vcg/complex/algorithms/implicit_smooth.h | 14 Rvcg-0.12.1/Rvcg/src/vcglib/vcg/complex/algorithms/local_optimization/tri_edge_collapse.h | 103 Rvcg-0.12.1/Rvcg/src/vcglib/vcg/complex/algorithms/mesh_to_matrix.h | 19 Rvcg-0.12.1/Rvcg/src/vcglib/vcg/complex/algorithms/parametrization/tangent_field_operators.h | 23 Rvcg-0.12.1/Rvcg/src/vcglib/vcg/complex/algorithms/polygon_polychord_collapse.h | 373 +- Rvcg-0.12.1/Rvcg/src/vcglib/vcg/complex/algorithms/update/flag.h | 5 Rvcg-0.12.1/Rvcg/src/vcglib/vcg/complex/algorithms/update/quality.h | 6 Rvcg-0.12.1/Rvcg/src/vcglib/vcg/complex/base.h | 9 Rvcg-0.12.1/Rvcg/src/vcglib/vcg/simplex/edge/component.h | 24 Rvcg-0.12.1/Rvcg/src/vcglib/vcg/space/intersection2.h | 51 Rvcg-0.12.1/Rvcg/src/vcglib/vcg/space/polygon3.h | 510 ++ Rvcg-0.12.1/Rvcg/src/vcglib/vcg/space/tetra3.h | 6 Rvcg-0.12.1/Rvcg/src/vcglib/wrap/gl/gl_field.h | 25 Rvcg-0.12.1/Rvcg/src/vcglib/wrap/igl/lscm_parametrization.h |only Rvcg-0.12.1/Rvcg/src/vcglib/wrap/igl/miq_parametrization.h | 22 Rvcg-0.12.1/Rvcg/src/vcglib/wrap/igl/smooth_field.h | 16 Rvcg-0.12.1/Rvcg/src/vcglib/wrap/io_trimesh/import_dae.h | 1764 +++++----- Rvcg-0.12.1/Rvcg/src/vcglib/wrap/io_trimesh/import_stl.h | 100 68 files changed, 2140 insertions(+), 1307 deletions(-)
Title: Analise Multivariada (Brazilian Portuguese)
Description: Pacote para Analise Multivariada, que possui funcoes que executam Analise de Correspondencia Simples (CA) e Multipla (MCA), Analise de Componentes Principais (PCA), Analise de Multiplos Fatores (MFA) para dados Quantitativos, Qualitativos, Frequencia (MFACT) e dados Mistos. Tambem possuim outras funcoes uteis para a Analise Multivariada.
Author: Paulo Cesar Ossani <ossanipc@hotmail.com>
Marcelo Angelo Cirillo <macufla@dex.ufla.br>
Maintainer: Paulo Cesar Ossani <ossanipc@hotmail.com>
Diff between MVar.pt versions 1.1 dated 2015-06-10 and 1.2 dated 2015-06-23
DESCRIPTION | 8 ++++---- MD5 | 38 ++++++++++++++++++++------------------ R/Biplot.R |only data/DataFreq.rda |binary data/DataQuan.rda |binary man/Biplot.Rd |only man/CA.Rd | 2 +- man/DataFreq.Rd | 11 +++++++---- man/DataMix.Rd | 2 +- man/DataQuan.Rd | 8 +++++--- man/Data_Cafes.Rd | 8 ++++---- man/Data_Individuos.Rd | 8 ++++---- man/GSVD.Rd | 4 ++-- man/IM.Rd | 4 ++-- man/MFA.Rd | 4 ++-- man/MVar.pt-package.Rd | 4 ++-- man/NormData.Rd | 4 ++-- man/PCA.Rd | 2 +- man/Plot.CA.Rd | 10 +++++----- man/Plot.MFA.Rd | 13 +++++++------ man/Plot.PCA.Rd | 6 +++--- 21 files changed, 72 insertions(+), 64 deletions(-)
Title: Routines for Fitting Kinetic Models with One or More State
Variables to Chemical Degradation Data
Description: Calculation routines based on the FOCUS Kinetics Report (2006).
Includes a function for conveniently defining differential equation models,
model solution based on eigenvalues if possible or using numerical solvers
and a choice of the optimisation methods made available by the 'FME' package.
If a C compiler (on windows: 'Rtools') is installed, differential
equation models are solved using compiled C functions.
Please note that no warranty is implied for correctness of results or fitness
for a particular purpose.
Author: Johannes Ranke [aut, cre, cph],
Katrin Lindenberger [ctb],
René Lehmann [ctb],
Eurofins Regulatory AG [cph]
Maintainer: Johannes Ranke <jranke@uni-bremen.de>
Diff between mkin versions 0.9-36 dated 2015-06-21 and 0.9-38 dated 2015-06-23
mkin-0.9-36/mkin/vignettes/FOCUS_Z.fdb_latexmk |only mkin-0.9-36/mkin/vignettes/FOCUS_Z.fls |only mkin-0.9-36/mkin/vignettes/compiled_models_cache |only mkin-0.9-38/mkin/DESCRIPTION | 8 mkin-0.9-38/mkin/MD5 | 75 -- mkin-0.9-38/mkin/NEWS | 17 mkin-0.9-38/mkin/R/mkinmod.R | 36 - mkin-0.9-38/mkin/build/vignette.rds |binary mkin-0.9-38/mkin/inst/doc/FOCUS_D.R | 3 mkin-0.9-38/mkin/inst/doc/FOCUS_D.Rmd | 26 mkin-0.9-38/mkin/inst/doc/FOCUS_D.html | 338 ++--------- mkin-0.9-38/mkin/inst/doc/FOCUS_L.Rmd | 21 mkin-0.9-38/mkin/inst/doc/FOCUS_L.html | 682 ++++++----------------- mkin-0.9-38/mkin/inst/doc/FOCUS_Z.pdf |binary mkin-0.9-38/mkin/inst/doc/compiled_models.R | 44 + mkin-0.9-38/mkin/inst/doc/compiled_models.Rmd | 62 +- mkin-0.9-38/mkin/inst/doc/compiled_models.html | 81 +- mkin-0.9-38/mkin/inst/doc/mkin.pdf |binary mkin-0.9-38/mkin/man/IORE.solution.Rd | 17 mkin-0.9-38/mkin/man/mccall81_245T.Rd | 6 mkin-0.9-38/mkin/man/mkinfit.Rd | 2 mkin-0.9-38/mkin/man/mkinmod.Rd | 13 mkin-0.9-38/mkin/man/mkinparplot.Rd | 4 mkin-0.9-38/mkin/vignettes/FOCUS_D.Rmd | 26 mkin-0.9-38/mkin/vignettes/FOCUS_L.Rmd | 21 mkin-0.9-38/mkin/vignettes/compiled_models.Rmd | 62 +- 26 files changed, 610 insertions(+), 934 deletions(-)
Title: Binary Classifier and Regression Model Interpretation Functions
Description: Compute permutation- based performance measures and create partial
dependence plots for (cross-validated) 'randomForest' and 'ada' models.
Author: Michel Ballings and Dirk Van den Poel
Maintainer: Michel Ballings <michel.ballings@GMail.com>
Diff between interpretR versions 0.2.2 dated 2015-05-10 and 0.2.3 dated 2015-06-23
DESCRIPTION | 14 +++++++------- MD5 | 10 +++++----- R/interpretRNews.R | 2 +- R/parDepPlot.R | 4 ++-- inst/NEWS | 3 +++ man/interpretRNews.Rd | 2 +- 6 files changed, 19 insertions(+), 16 deletions(-)
Title: Interactive Exploration of Contour Data
Description: Interactive tools to explore topographic-like data
sets. Such data sets take the form of a matrix in which the rows and
columns provide location/frequency information, and the matrix elements
contain altitude/response information. Such data is found in cartography,
2D spectroscopy and chemometrics. The functions in this package create
interactive web pages showing the contoured data, possibly with
slices from the original matrix parallel to each dimension. The interactive
behavior is created using the D3.js JavaScript library by Mike Bostock.
Author: Bryan Hanson [aut, cre],
Kristina Mulry [ctb]
Maintainer: Bryan Hanson <hanson@depauw.edu>
Diff between exCon versions 0.1.5 dated 2015-05-07 and 0.1.9 dated 2015-06-23
DESCRIPTION | 17 +-- MD5 | 24 +++- NAMESPACE | 1 NEWS | 75 +++++++-------- R/exCon-package.R | 11 +- R/exCon.R | 190 +++++++++++++++++++++++++++++++-------- inst/extdata/eC2_brushNguides.js |only inst/extdata/eC2_contours.js |only inst/extdata/eC2_controls.js |only inst/extdata/eC2_globals.js |only inst/extdata/eC2_main.js |only inst/extdata/eC_globals.js | 16 +-- inst/extdata/exCon.html | 15 +-- inst/extdata/exCon2.html |only man/exCon-package.Rd | 10 +- man/exCon.Rd | 51 +++++----- 16 files changed, 268 insertions(+), 142 deletions(-)
Title: Bindings for the Geospatial Data Abstraction Library
Description: Provides bindings to Frank Warmerdam's Geospatial Data Abstraction Library (GDAL) (>= 1.6.3) and access to projection/transformation operations from the PROJ.4 library. The GDAL and PROJ.4 libraries are external to the package, and, when installing the package from source, must be correctly installed first. Both GDAL raster and OGR vector map data can be imported into R, and GDAL raster data and OGR vector data exported. Use is made of classes defined in the sp package. Windows and Mac Intel OS X binaries (including GDAL, PROJ.4 and Expat) are provided on CRAN.
Author: Roger Bivand [cre, aut],
Tim Keitt [aut],
Barry Rowlingson [aut],
Edzer Pebesma [ctb],
Michael Sumner [ctb],
Robert Hijmans [ctb],
Even Rouault [ctb]
Maintainer: Roger Bivand <Roger.Bivand@nhh.no>
Diff between rgdal versions 0.9-3 dated 2015-05-21 and 1.0-4 dated 2015-06-23
ChangeLog | 68 +++++++ DESCRIPTION | 18 +- MD5 | 51 +++-- R/AAA.R | 8 R/gdal.R | 6 R/ogr.R | 100 +++++++---- R/ogr_sp.R | 35 +++- R/ogr_write.R | 10 + build/vignette.rds |binary configure | 52 +++--- configure.ac | 29 ++- inst/ChangeLog | 68 +++++++ inst/SVN_VERSION | 2 inst/doc/OGR_shape_encoding.pdf |binary inst/vectors/test64.csv |only inst/vectors/test64.csvt |only inst/vectors/test64.vrt |only man/GDALMajorObject-class.Rd | 2 man/GDALReadOnlyDataset-class.Rd | 2 man/readOGR.Rd | 16 + man/writeOGR.Rd | 25 +- src/OGR_write.cpp | 209 ++++++++++++++++++++---- src/gdal-bindings.cpp | 18 ++ src/ogr_geom.cpp | 60 ++++++- src/ogr_proj.cpp | 11 + src/ogrdrivers.cpp | 31 +++ src/ogrsource.cpp | 332 ++++++++++++++++++++++++++++++++++++--- src/rgdal.h | 7 28 files changed, 981 insertions(+), 179 deletions(-)
Title: Growth Charts via Regression Quantiles
Description: Fits non-crossing regression quantiles as a function of linear covariates and a smooth terms via B-splines with difference penalties.
Author: Vito M. R. Muggeo [aut, cre]
Maintainer: Vito M. R. Muggeo <vito.muggeo@unipa.it>
Diff between quantregGrowth versions 0.3-0 dated 2014-07-25 and 0.3-1 dated 2015-06-23
DESCRIPTION | 14 +++++++------- MD5 | 18 +++++++++--------- NEWS | 8 ++++++++ R/gcrq.R | 18 +++++++++--------- R/ncross.rq.fitX.R | 8 ++++---- R/ncross.rq.fitXB.R | 10 +++++----- R/plot.gcrq.R | 4 ++-- R/predictQR.R | 4 ++-- man/gcrq.Rd | 9 +++++---- man/quantregGrowth-package.Rd | 12 ++++++------ 10 files changed, 57 insertions(+), 48 deletions(-)
More information about quantregGrowth at CRAN
Permanent link
Title: Calculations and Visualisations Related to Geometric
Morphometrics
Description: A toolset for Geometric Morphometrics and mesh processing. This
includes (among other stuff) mesh deformations based on reference points,
permutation tests, detection of outliers, processing of sliding
semi-landmarks and semi-automated surface landmark placement.
Author: Stefan Schlager [aut, cre, cph],
Gregory Jefferis [ctb]
Maintainer: Stefan Schlager <stefan.schlager@uniklinik-freiburg.de>
Diff between Morpho versions 2.2 dated 2014-12-16 and 2.3.0 dated 2015-06-23
Morpho-2.2/Morpho/R/warp.mesh.r |only Morpho-2.2/Morpho/README.md |only Morpho-2.2/Morpho/man/meanMat.Rd |only Morpho-2.2/Morpho/man/warp.mesh.Rd |only Morpho-2.2/Morpho/src/meanMat.cpp |only Morpho-2.3.0/Morpho/DESCRIPTION | 32 - Morpho-2.3.0/Morpho/MD5 | 344 +++++++++-------- Morpho-2.3.0/Morpho/NAMESPACE | 23 + Morpho-2.3.0/Morpho/R/CAC.r | 4 Morpho-2.3.0/Morpho/R/CVA.crova.r | 16 Morpho-2.3.0/Morpho/R/CVA.r | 28 - Morpho-2.3.0/Morpho/R/CVAdists.r | 5 Morpho-2.3.0/Morpho/R/ComputeTransform.r | 24 + Morpho-2.3.0/Morpho/R/CreateL.r | 6 Morpho-2.3.0/Morpho/R/Morpho-package.R | 19 Morpho-2.3.0/Morpho/R/PCmeaning.r |only Morpho-2.3.0/Morpho/R/ProcGPA.r | 4 Morpho-2.3.0/Morpho/R/RegScore.r | 8 Morpho-2.3.0/Morpho/R/applyTransform.r | 48 +- Morpho-2.3.0/Morpho/R/armaGinv.r | 10 Morpho-2.3.0/Morpho/R/asymPermu.r | 33 - Morpho-2.3.0/Morpho/R/bindArr.r | 10 Morpho-2.3.0/Morpho/R/cSize.r | 2 Morpho-2.3.0/Morpho/R/check.lm.r | 2 Morpho-2.3.0/Morpho/R/classify.r | 92 +++- Morpho-2.3.0/Morpho/R/covDist.r | 2 Morpho-2.3.0/Morpho/R/createVarTable.r |only Morpho-2.3.0/Morpho/R/deform.grid.r | 8 Morpho-2.3.0/Morpho/R/deformGrid2d.r | 57 +- Morpho-2.3.0/Morpho/R/eigenPCA.r | 4 Morpho-2.3.0/Morpho/R/fx.r | 32 - Morpho-2.3.0/Morpho/R/groupPCA.r | 46 +- Morpho-2.3.0/Morpho/R/groupPCAcrova.r | 5 Morpho-2.3.0/Morpho/R/kendalldist.r | 4 Morpho-2.3.0/Morpho/R/line2plane.r |only Morpho-2.3.0/Morpho/R/list2array.r |only Morpho-2.3.0/Morpho/R/mergeMeshes.r | 11 Morpho-2.3.0/Morpho/R/meshDist.r | 80 ++-- Morpho-2.3.0/Morpho/R/meshDistMatrix.r | 29 - Morpho-2.3.0/Morpho/R/mirror.r | 55 +- Morpho-2.3.0/Morpho/R/name2.r | 82 +--- Morpho-2.3.0/Morpho/R/orp.r | 2 Morpho-2.3.0/Morpho/R/pcAlign.r | 65 ++- Morpho-2.3.0/Morpho/R/pcaplot3d.r | 31 - Morpho-2.3.0/Morpho/R/permudist.r | 12 Morpho-2.3.0/Morpho/R/permuvec.r | 8 Morpho-2.3.0/Morpho/R/place.patch.r | 6 Morpho-2.3.0/Morpho/R/pls2B.r | 462 +++++++++++++++++++----- Morpho-2.3.0/Morpho/R/procAOVsym.r | 4 Morpho-2.3.0/Morpho/R/procSym.r | 23 + Morpho-2.3.0/Morpho/R/relax.lm.r | 55 ++ Morpho-2.3.0/Morpho/R/relwarps.r | 7 Morpho-2.3.0/Morpho/R/retrodeform.r | 6 Morpho-2.3.0/Morpho/R/rotmesh.onto.r | 2 Morpho-2.3.0/Morpho/R/rotonto.r | 4 Morpho-2.3.0/Morpho/R/scalemesh.r | 4 Morpho-2.3.0/Morpho/R/showPC.r | 25 - Morpho-2.3.0/Morpho/R/slider3d.r | 12 Morpho-2.3.0/Morpho/R/tps3d.r | 61 +-- Morpho-2.3.0/Morpho/R/typprob.r | 64 ++- Morpho-2.3.0/Morpho/R/vecx.r | 43 +- Morpho-2.3.0/Morpho/R/warpmovie.matrix.r | 4 Morpho-2.3.0/Morpho/R/write.pts.r | 12 Morpho-2.3.0/Morpho/inst/NEWS.Rd | 44 ++ Morpho-2.3.0/Morpho/inst/extdata |only Morpho-2.3.0/Morpho/man/CAC.Rd | 3 Morpho-2.3.0/Morpho/man/CVA.Rd | 7 Morpho-2.3.0/Morpho/man/CreateL.Rd | 7 Morpho-2.3.0/Morpho/man/Morpho-deprecated.Rd | 7 Morpho-2.3.0/Morpho/man/Morpho-package.Rd | 13 Morpho-2.3.0/Morpho/man/NNshapeReg.Rd | 3 Morpho-2.3.0/Morpho/man/PCdist.Rd | 3 Morpho-2.3.0/Morpho/man/ProcGPA.Rd | 3 Morpho-2.3.0/Morpho/man/RegScore.Rd | 3 Morpho-2.3.0/Morpho/man/angle.calc.Rd | 3 Morpho-2.3.0/Morpho/man/anonymize.Rd | 3 Morpho-2.3.0/Morpho/man/applyTransform.Rd | 7 Morpho-2.3.0/Morpho/man/armaGinv.Rd |only Morpho-2.3.0/Morpho/man/arrMean3.Rd | 3 Morpho-2.3.0/Morpho/man/asymPermute.Rd | 3 Morpho-2.3.0/Morpho/man/barycenter.Rd | 3 Morpho-2.3.0/Morpho/man/bindArr.Rd | 3 Morpho-2.3.0/Morpho/man/boneData.Rd | 3 Morpho-2.3.0/Morpho/man/cExtract.Rd | 3 Morpho-2.3.0/Morpho/man/cSize.Rd | 3 Morpho-2.3.0/Morpho/man/checkLM.Rd | 5 Morpho-2.3.0/Morpho/man/classify.Rd | 17 Morpho-2.3.0/Morpho/man/closemeshKD.Rd | 3 Morpho-2.3.0/Morpho/man/colors.Rd | 3 Morpho-2.3.0/Morpho/man/computeTransform.Rd | 14 Morpho-2.3.0/Morpho/man/covDist.Rd | 3 Morpho-2.3.0/Morpho/man/covW.Rd | 3 Morpho-2.3.0/Morpho/man/createAtlas.Rd | 3 Morpho-2.3.0/Morpho/man/createMissingList.Rd | 3 Morpho-2.3.0/Morpho/man/cutMeshPlane.Rd | 3 Morpho-2.3.0/Morpho/man/cutSpace.Rd | 3 Morpho-2.3.0/Morpho/man/deformGrid2d.Rd | 10 Morpho-2.3.0/Morpho/man/deformGrid3d.Rd | 3 Morpho-2.3.0/Morpho/man/exVar.Rd | 3 Morpho-2.3.0/Morpho/man/find.outliers.Rd | 3 Morpho-2.3.0/Morpho/man/fixLMmirror.Rd | 3 Morpho-2.3.0/Morpho/man/fixLMtps.Rd | 3 Morpho-2.3.0/Morpho/man/getFaces.Rd | 3 Morpho-2.3.0/Morpho/man/getMeaningfulPCs.Rd |only Morpho-2.3.0/Morpho/man/getPCtol.Rd |only Morpho-2.3.0/Morpho/man/getPLSfromScores.Rd |only Morpho-2.3.0/Morpho/man/getPLSscores.Rd |only Morpho-2.3.0/Morpho/man/getTrafo4x4.Rd | 3 Morpho-2.3.0/Morpho/man/getTrafoRotaxis.Rd | 3 Morpho-2.3.0/Morpho/man/groupPCA.Rd | 16 Morpho-2.3.0/Morpho/man/histGroup.Rd | 3 Morpho-2.3.0/Morpho/man/icpmat.Rd | 8 Morpho-2.3.0/Morpho/man/invertFaces.Rd | 3 Morpho-2.3.0/Morpho/man/kendalldist.Rd | 3 Morpho-2.3.0/Morpho/man/line2plane.Rd |only Morpho-2.3.0/Morpho/man/lineplot.Rd | 3 Morpho-2.3.0/Morpho/man/list2array.Rd |only Morpho-2.3.0/Morpho/man/mcNNindex.Rd | 3 Morpho-2.3.0/Morpho/man/mergeMeshes.Rd | 3 Morpho-2.3.0/Morpho/man/mesh2grey.Rd | 3 Morpho-2.3.0/Morpho/man/mesh2ply.Rd | 3 Morpho-2.3.0/Morpho/man/meshDist.Rd | 84 ++-- Morpho-2.3.0/Morpho/man/meshPlaneIntersect.Rd | 3 Morpho-2.3.0/Morpho/man/meshcube.Rd | 3 Morpho-2.3.0/Morpho/man/meshres.Rd | 3 Morpho-2.3.0/Morpho/man/mirror.Rd | 15 Morpho-2.3.0/Morpho/man/name2factor.Rd | 7 Morpho-2.3.0/Morpho/man/nose.Rd | 3 Morpho-2.3.0/Morpho/man/pcAlign.Rd | 20 - Morpho-2.3.0/Morpho/man/pcaplot3d.Rd | 20 - Morpho-2.3.0/Morpho/man/permudist.Rd | 12 Morpho-2.3.0/Morpho/man/permuvec.Rd | 3 Morpho-2.3.0/Morpho/man/placePatch.Rd | 7 Morpho-2.3.0/Morpho/man/plotAtlas.Rd | 3 Morpho-2.3.0/Morpho/man/plotNormals.Rd | 3 Morpho-2.3.0/Morpho/man/pls2B.Rd | 32 + Morpho-2.3.0/Morpho/man/plsCoVar.Rd |only Morpho-2.3.0/Morpho/man/ply2mesh.Rd | 3 Morpho-2.3.0/Morpho/man/points2plane.Rd | 3 Morpho-2.3.0/Morpho/man/predictPLSfromData.Rd |only Morpho-2.3.0/Morpho/man/predictPLSfromScores.Rd |only Morpho-2.3.0/Morpho/man/predictShape.lm.Rd | 3 Morpho-2.3.0/Morpho/man/proc.weight.Rd | 3 Morpho-2.3.0/Morpho/man/procAOVsym.Rd | 3 Morpho-2.3.0/Morpho/man/procSym.Rd | 5 Morpho-2.3.0/Morpho/man/projRead.Rd | 3 Morpho-2.3.0/Morpho/man/qqmat.Rd | 3 Morpho-2.3.0/Morpho/man/quad2trimesh.Rd | 3 Morpho-2.3.0/Morpho/man/r2morphoj.Rd | 3 Morpho-2.3.0/Morpho/man/ray2mesh.Rd | 3 Morpho-2.3.0/Morpho/man/read.csv.folder.Rd | 3 Morpho-2.3.0/Morpho/man/read.lmdta.Rd | 3 Morpho-2.3.0/Morpho/man/read.mpp.Rd | 3 Morpho-2.3.0/Morpho/man/read.pts.Rd | 3 Morpho-2.3.0/Morpho/man/readLandmarks.csv.Rd | 3 Morpho-2.3.0/Morpho/man/readallTPS.Rd | 3 Morpho-2.3.0/Morpho/man/regdist.Rd | 3 Morpho-2.3.0/Morpho/man/relWarps.Rd | 7 Morpho-2.3.0/Morpho/man/relaxLM.Rd | 39 +- Morpho-2.3.0/Morpho/man/render.Rd | 35 + Morpho-2.3.0/Morpho/man/retroDeform3d.Rd | 3 Morpho-2.3.0/Morpho/man/retroDeformMesh.Rd | 7 Morpho-2.3.0/Morpho/man/rotaxis3d.Rd | 3 Morpho-2.3.0/Morpho/man/rotaxisMat.Rd | 3 Morpho-2.3.0/Morpho/man/rotmesh.onto.Rd | 5 Morpho-2.3.0/Morpho/man/rotonmat.Rd | 3 Morpho-2.3.0/Morpho/man/rotonto.Rd | 3 Morpho-2.3.0/Morpho/man/scalemesh.Rd | 3 Morpho-2.3.0/Morpho/man/showPC.Rd | 7 Morpho-2.3.0/Morpho/man/slider3d.Rd | 10 Morpho-2.3.0/Morpho/man/solutionSpace.Rd | 3 Morpho-2.3.0/Morpho/man/symmetrize.Rd | 3 Morpho-2.3.0/Morpho/man/tangentPlane.Rd | 3 Morpho-2.3.0/Morpho/man/tps3d.Rd | 47 +- Morpho-2.3.0/Morpho/man/typprob.Rd | 32 - Morpho-2.3.0/Morpho/man/updateNormals.Rd | 3 Morpho-2.3.0/Morpho/man/vecx.Rd | 3 Morpho-2.3.0/Morpho/man/vertex.Rd | 3 Morpho-2.3.0/Morpho/man/warpmovie3d.Rd | 7 Morpho-2.3.0/Morpho/man/write.pts.Rd | 7 Morpho-2.3.0/Morpho/src/tpsfx.cpp | 13 Morpho-2.3.0/Morpho/tests |only 182 files changed, 1841 insertions(+), 991 deletions(-)
Title: Joint Modeling of Longitudinal and Survival Data
Description: Shared parameter models for the joint modeling of longitudinal and time-to-event data.
Author: Dimitris Rizopoulos <d.rizopoulos@erasmusmc.nl>
Maintainer: Dimitris Rizopoulos <d.rizopoulos@erasmusmc.nl>
Diff between JM versions 1.3-0 dated 2014-05-01 and 1.4-0 dated 2015-06-23
DESCRIPTION | 11 +++++------ MD5 | 34 +++++++++++++++++----------------- NAMESPACE | 6 +++++- R/fitted.jointModel.R | 16 ++++++++++++---- R/globals.R | 2 +- R/predict.jointModel.R | 18 +++++++++--------- R/summary.jointModel.R | 4 ++-- R/survfitJM.jointModel.R | 20 ++++++++++---------- R/xtable.jointModel.R | 2 +- data/aids.id.rda |binary data/aids.rda |binary data/pbc2.id.rda |binary data/pbc2.rda |binary data/prothro.rda |binary data/prothros.rda |binary man/JM.Rd | 4 ++-- man/jointModel.Rd | 2 +- man/plot-rocJM.Rd | 2 -- 18 files changed, 65 insertions(+), 56 deletions(-)
Title: Geometric Morphometric Analyses of 2D/3D Landmark Data
Description: Read, manipulate, and digitize landmark data, generate shape
variables via Procrustes analysis for points, curves and surfaces, perform
shape analyses, and provide graphical depictions of shapes and patterns of
shape variation.
Author: Dean Adams, Michael Collyer, Emma Sherratt
Maintainer: Dean Adams <dcadams@iastate.edu>
Diff between geomorph versions 2.1.5 dated 2015-05-22 and 2.1.6 dated 2015-06-23
geomorph-2.1.5/geomorph/R/define.sliders.2d.r |only geomorph-2.1.5/geomorph/R/define.sliders.3d.r |only geomorph-2.1.5/geomorph/R/pairwise.slope.test.r |only geomorph-2.1.5/geomorph/R/pairwiseD.test.r |only geomorph-2.1.6/geomorph/DESCRIPTION | 8 +-- geomorph-2.1.6/geomorph/MD5 | 46 ++++++++++----------- geomorph-2.1.6/geomorph/NAMESPACE | 1 geomorph-2.1.6/geomorph/NEWS | 18 +++++++- geomorph-2.1.6/geomorph/R/compare.evol.rates.r | 22 +++++++--- geomorph-2.1.6/geomorph/R/digit.curves.r | 14 ++++-- geomorph-2.1.6/geomorph/R/digitize2d.r | 11 ++--- geomorph-2.1.6/geomorph/R/geomorph.support.code.r | 39 +++++++++++++++++ geomorph-2.1.6/geomorph/R/globalIntegration.r |only geomorph-2.1.6/geomorph/R/physignal.r | 7 +-- geomorph-2.1.6/geomorph/R/plotTangentSpace.r | 6 ++ geomorph-2.1.6/geomorph/R/read.morphologika.r | 3 - geomorph-2.1.6/geomorph/R/writeland.tps.r | 10 ++++ geomorph-2.1.6/geomorph/man/compare.evol.rates.Rd | 11 +++-- geomorph-2.1.6/geomorph/man/define.sliders.2d.Rd | 10 +--- geomorph-2.1.6/geomorph/man/define.sliders.3d.Rd | 10 +--- geomorph-2.1.6/geomorph/man/digitize2d.Rd | 2 geomorph-2.1.6/geomorph/man/globalIntegration.Rd |only geomorph-2.1.6/geomorph/man/pairwise.slope.test.Rd | 10 +--- geomorph-2.1.6/geomorph/man/pairwiseD.test.Rd | 10 +--- geomorph-2.1.6/geomorph/man/physignal.Rd | 4 + geomorph-2.1.6/geomorph/man/plotTangentSpace.Rd | 4 + geomorph-2.1.6/geomorph/man/writeland.tps.Rd | 4 + 27 files changed, 170 insertions(+), 80 deletions(-)
Title: Modelling Actual, Potential and Reference Crop
Evapotranspiration
Description: Uses data and constants to calculate potential evapotranspiration (PET) and actual evapotranspiration (AET) from 17 different formulations including Penman, Penman-Monteith FAO 56, Priestley-Taylor and Morton formulations.
Author: Danlu Guo <danlu.guo@adelaide.edu.au>, Seth Westra <swestra@civeng.adelaide.edu.au>
Maintainer: Danlu Guo <danlu.guo@adelaide.edu.au>
Diff between Evapotranspiration versions 1.5 dated 2015-01-15 and 1.6 dated 2015-06-23
DESCRIPTION | 16 ++++---- MD5 | 16 ++++---- NAMESPACE | 19 +++++++++ NEWS | 25 +++--------- R/Evapotranspiration.R | 8 ---- R/Plotting.R | 54 ++++++++++++++++----------- R/Reading.R | 96 +++++++++++++++++++++++++++++++++++-------------- man/ETComparison.Rd | 14 +++---- man/ReadInputs.Rd | 9 +++- 9 files changed, 157 insertions(+), 100 deletions(-)
More information about Evapotranspiration at CRAN
Permanent link
Title: Data Quality Visualization Tools for Partially Accruing Data
Description: Package for visualizing data quality of partially accruing data.
Author: Julie Eaton and Ian Painter
Maintainer: Julie Eaton <jreaton@uw.edu>
Diff between accrued versions 1.2 dated 2014-09-08 and 1.3 dated 2015-06-23
DESCRIPTION | 14 +++++++------- MD5 | 36 ++++++++++++++++++------------------ NAMESPACE | 9 ++++++++- data/accruedDataExample.rda |binary data/accruedDataILIExample.rda |binary inst/doc/accrued_vignette.pdf |binary man/accrued-package.Rd | 25 +++++++++++++------------ man/accruedDataILIExample.Rd | 6 +++--- man/accruedErrors.Rd | 13 ++++++------- man/asOf.Rd | 28 +++++++++++++++++++--------- man/barcode.Rd | 7 ++++--- man/laggedTSarray.Rd | 14 +++++++++++--- man/plot.accrued.Rd | 5 +++-- man/plot.summary.accrued.Rd | 9 ++++++--- man/print.accrued.Rd | 4 ++-- man/print.summary.accrued.Rd | 4 ++-- man/summary.accrued.Rd | 4 ++-- man/summary.accruedErrors.Rd | 4 ++-- man/uploadPattern.Rd | 6 +++--- 19 files changed, 109 insertions(+), 79 deletions(-)