Title: Implementation of Parametric Formulas for Soil Water Retention
or Conductivity Curve
Description: It is a set of R implementations of parametric formulas of soil water
retention or conductivity curve. At the moment, only Van Genuchten (for
soil water retention curve) and Mualem (for hydraulic conductivity) were
implemented. See reference
\url{http://en.wikipedia.org/wiki/Water_retention_curve}.
Author: Emanuele Cordano, Daniele Andreis, Fabio Zottele
Maintainer: Emanuele Cordano <emanuele.cordano@gmail.com>
Diff between soilwater versions 1.0.1 dated 2012-12-04 and 1.0.2 dated 2015-07-25
soilwater-1.0.1/soilwater/LICENSE |only soilwater-1.0.1/soilwater/R/soilwater-package.R |only soilwater-1.0.1/soilwater/man/soilwater-package.Rd |only soilwater-1.0.2/soilwater/DESCRIPTION | 29 +-- soilwater-1.0.2/soilwater/MD5 | 21 +- soilwater-1.0.2/soilwater/NAMESPACE | 3 soilwater-1.0.2/soilwater/R/additional.water.table.recharge.R |only soilwater-1.0.2/soilwater/R/hydraulic_diffusivity.R | 43 +++- soilwater-1.0.2/soilwater/R/volume.R | 4 soilwater-1.0.2/soilwater/README.md |only soilwater-1.0.2/soilwater/inst/doc/example/SWRC.R | 6 soilwater-1.0.2/soilwater/inst/doc/example/SWRC_1.R |only soilwater-1.0.2/soilwater/man/hydraulic_diffusivity.Rd | 92 +++++----- soilwater-1.0.2/soilwater/man/unitResponse.Rd |only soilwater-1.0.2/soilwater/man/watervolume.Rd | 34 +-- 15 files changed, 129 insertions(+), 103 deletions(-)
Title: Variable Selection Deviation Measures and Instability Tests for
High-Dimensional Generalized Linear Models
Description: Variable selection deviation (VSD) measures and instability tests for high-dimensional model selection methods such as LASSO, SCAD and MCP, etc., to decide whether the sparse patterns identified by those methods are reliable.
Author: Ying Nan <nanx0006@gmail.com>, Yi Yang <yiyang@umn.edu>, Yuhong Yang <yyang@stat.umn.edu>, Chenglong Ye <yexxx323@umn.edu>
Maintainer: Yi Yang <yiyang@umn.edu>
Diff between glmvsd versions 1.2 dated 2015-02-13 and 1.3 dated 2015-07-25
glmvsd-1.2/glmvsd/R/logitBIC.R |only glmvsd-1.2/glmvsd/R/lsBIC.R |only glmvsd-1.3/glmvsd/ChangeLog | 4 ++++ glmvsd-1.3/glmvsd/DESCRIPTION | 10 +++++----- glmvsd-1.3/glmvsd/MD5 | 22 +++++++++++----------- glmvsd-1.3/glmvsd/R/binomialfit.R | 7 +++++-- glmvsd-1.3/glmvsd/R/gaussianfit.R | 6 +++--- glmvsd-1.3/glmvsd/R/glmvsd.R | 28 ++++++++++++++++++---------- glmvsd-1.3/glmvsd/R/logitARM.R | 30 ++++++++++++++++++------------ glmvsd-1.3/glmvsd/R/logitIC.R |only glmvsd-1.3/glmvsd/R/lsARM.R | 18 +++++++++++++----- glmvsd-1.3/glmvsd/R/lsIC.R |only glmvsd-1.3/glmvsd/R/tools.R | 4 +++- glmvsd-1.3/glmvsd/man/glmvsd.Rd | 26 ++++++++++++++++---------- 14 files changed, 96 insertions(+), 59 deletions(-)
Title: Fast Compressed Neural Networks for R
Description: The FCNN4R package provides an interface to kernel routines
from the FCNN C++ library. FCNN is based on a completely new
Artificial Neural Network representation that offers unmatched
efficiency, modularity, and extensibility. FCNN4R provides
standard teaching (backpropagation, Rprop) and pruning
algorithms (minimum magnitude, Optimal Brain Surgeon), but it is
first and foremost an efficient computational engine. Users
can easily implement their algorithms by taking advantage
of fast gradient computing routines, as well as network
reconstruction functionality (removing weights and redundant
neurons).
Author: Grzegorz Klima <gklima@users.sourceforge.net>
Maintainer: Grzegorz Klima <gklima@users.sourceforge.net>
Diff between FCNN4R versions 0.3.3 dated 2015-07-21 and 0.3.4 dated 2015-07-25
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- R/mlp_net.R | 14 ++++++++++---- R/mlp_prune.R | 34 ++++++++++++---------------------- R/mlp_teach.R | 7 ++++--- man/mlp_rm_neurons.Rd | 5 +++-- src/fcnn/activation.h | 8 ++++---- src/fcnn/struct.cpp | 4 ++-- 8 files changed, 46 insertions(+), 48 deletions(-)
Title: Test Analysis Modules
Description:
Includes marginal and joint maximum likelihood
estimation of uni- and multidimensional item response models
(Rasch, 2PL, 3PL, Generalized Partial Credit, Multi Facets,
Nominal Item Response, Structured Latent Class Analysis,
Mixture Distribution IRT Models, Located Latent Class Models).
Latent regression models and plausible value imputation are
also supported.
Author: Thomas Kiefer [aut], Alexander Robitzsch [aut, cre], Margaret Wu [aut]
Maintainer: Alexander Robitzsch <a.robitzsch@bifie.at>
Diff between TAM versions 1.9-0 dated 2015-06-30 and 1.10-0 dated 2015-07-25
DESCRIPTION | 13 ++-- MD5 | 49 ++++++++++-------- NAMESPACE | 29 ++++++++++ R/IRT.irfprob.tam.R | 73 +++++++++++++++++---------- R/IRT.itemfit.R |only R/IRT.simulate.R |only R/IRT.threshold.R | 15 ++++- R/IRT.truescore.R |only R/calc_posterior.v2.R | 29 ++++++++-- R/dmvnorm_TAM.R |only R/mstep.regression.R | 17 ++++-- R/stud_prior.R | 37 ++++++++++---- R/tam.calc.counts.R | 18 ++++-- R/tam.mml.2pl.R | 9 ++- R/tam.mml.3pl.R | 23 ++++++-- R/tam.mml.R | 40 +++++++++++---- R/tam.mml.mfr.R | 11 +++- inst/NEWS | 124 ++++++++++++++++++++++++++++------------------- man/IRT.WrightMap.Rd | 4 - man/IRT.itemfit.Rd |only man/IRT.simulate.Rd |only man/IRT.threshold.Rd | 43 +++++++++++++--- man/IRT.truescore.Rd |only man/IRTLikelihood.cfa.Rd | 2 man/TAM-internal.Rd | 6 +- man/TAM-package.Rd | 2 man/plot.tam.Rd | 4 + man/tam.fit.Rd | 2 man/tam.mml.Rd | 8 ++- 29 files changed, 386 insertions(+), 172 deletions(-)
Title: Nonlinear Time Series Analysis
Description: Functions for nonlinear time series analysis. This package permits
the computation of the most-used nonlinear statistics/algorithms
including generalized correlation dimension, information dimension,
largest Lyapunov exponent, sample entropy and Recurrence
Quantification Analysis (RQA), among others. Basic routines
for surrogate data testing are also included. Part of this work
was based on the book "Nonlinear time series analysis" by
Holger Kantz and Thomas Schreiber (ISBN: 9780521529020).
Author: Constantino A. Garcia [aut, cre],
Gunther Sawitzki [ctb]
Maintainer: Constantino A. Garcia <constantinoantonio.garcia@usc.es>
Diff between nonlinearTseries versions 0.2.2 dated 2015-06-03 and 0.2.3 dated 2015-07-25
nonlinearTseries-0.2.2/nonlinearTseries/src/corrDimFromTakens.c |only nonlinearTseries-0.2.2/nonlinearTseries/src/generalizedCorrDimFromTakens.c |only nonlinearTseries-0.2.2/nonlinearTseries/vignettes/biblio.bib |only nonlinearTseries-0.2.3/nonlinearTseries/DESCRIPTION | 17 +-- nonlinearTseries-0.2.3/nonlinearTseries/MD5 | 43 ++++------ nonlinearTseries-0.2.3/nonlinearTseries/NAMESPACE | 17 +++ nonlinearTseries-0.2.3/nonlinearTseries/R/corrDim.R | 2 nonlinearTseries-0.2.3/nonlinearTseries/R/getMinimumEmbeddingDimension.R | 19 +++- nonlinearTseries-0.2.3/nonlinearTseries/R/informationDimension.R | 22 +++-- nonlinearTseries-0.2.3/nonlinearTseries/R/nonLinearSystems.R | 20 ++-- nonlinearTseries-0.2.3/nonlinearTseries/R/utils.R | 6 + nonlinearTseries-0.2.3/nonlinearTseries/build/vignette.rds |binary nonlinearTseries-0.2.3/nonlinearTseries/inst/doc/nonlinearTseries_quickstart.R |only nonlinearTseries-0.2.3/nonlinearTseries/inst/doc/nonlinearTseries_quickstart.Rmd | 25 ++--- nonlinearTseries-0.2.3/nonlinearTseries/inst/doc/nonlinearTseries_quickstart.html | 36 +++----- nonlinearTseries-0.2.3/nonlinearTseries/man/cliffordMap.Rd | 4 nonlinearTseries-0.2.3/nonlinearTseries/man/ikedaMap.Rd | 4 nonlinearTseries-0.2.3/nonlinearTseries/src/ANN/ANN_CONSTANTS.h |only nonlinearTseries-0.2.3/nonlinearTseries/src/Lyapunov.c | 4 nonlinearTseries-0.2.3/nonlinearTseries/src/LyapunovFromTakens.c | 4 nonlinearTseries-0.2.3/nonlinearTseries/src/corrDim.c | 4 nonlinearTseries-0.2.3/nonlinearTseries/src/informationDimension.c | 17 ++- nonlinearTseries-0.2.3/nonlinearTseries/src/kd_dump.cpp | 11 +- nonlinearTseries-0.2.3/nonlinearTseries/src/kd_split.cpp | 22 +---- nonlinearTseries-0.2.3/nonlinearTseries/vignettes/nonlinearTseries_quickstart.Rmd | 25 ++--- 25 files changed, 163 insertions(+), 139 deletions(-)
More information about nonlinearTseries at CRAN
Permanent link
Title: Video Comparison Tool
Description: It will take the vectors of motion for two videos
(coming from a variant of shotdetect code allowing to store
detailed motion vectors in JSON format, for instance) and it
will look for comparing taking out the common chunk.
Then, provided you have some image's hashes it will compare
their signature in order to make up the decision about
chunk similarity of two video files.
ShotDetect is a free software which detects shots and scenes
from a video (http://johmathe.name/shotdetect.html).
Author: Silvia Espinosa, Joaquin Ordieres, Antonio Bello, Jose Maria Perez
Maintainer: Joaquin Ordieres <j.ordieres@upm.es>
Diff between VideoComparison versions 0.11 dated 2014-07-09 and 0.15 dated 2015-07-25
VideoComparison-0.11/VideoComparison/data/imagehash1.txt.gz |only VideoComparison-0.11/VideoComparison/data/imagehash2.txt.gz |only VideoComparison-0.11/VideoComparison/data/videomotion1.txt.gz |only VideoComparison-0.11/VideoComparison/data/videomotion2.txt.gz |only VideoComparison-0.15/VideoComparison/ChangeLog | 5 + VideoComparison-0.15/VideoComparison/DESCRIPTION | 16 ++--- VideoComparison-0.15/VideoComparison/MD5 | 31 +++++----- VideoComparison-0.15/VideoComparison/NAMESPACE | 6 + VideoComparison-0.15/VideoComparison/R/ExtractMotion.R | 2 VideoComparison-0.15/VideoComparison/R/VideoComparison.R | 6 - VideoComparison-0.15/VideoComparison/R/VideoDistance.R | 4 - VideoComparison-0.15/VideoComparison/data/datalist |only VideoComparison-0.15/VideoComparison/inst/extdata |only VideoComparison-0.15/VideoComparison/man/VideoComparison-package.Rd | 4 - VideoComparison-0.15/VideoComparison/man/VideoComparison.Rd | 7 +- VideoComparison-0.15/VideoComparison/man/VideoDistance.Rd | 4 - VideoComparison-0.15/VideoComparison/man/VideoMatch.Rd | 4 - VideoComparison-0.15/VideoComparison/src/Makevars.win | 2 18 files changed, 52 insertions(+), 39 deletions(-)
More information about VideoComparison at CRAN
Permanent link
Title: Seamless R and C++ Integration
Description: The 'Rcpp' package provides R functions as well as C++ classes which
offer a seamless integration of R and C++. Many R data types and objects can be
mapped back and forth to C++ equivalents which facilitates both writing of new
code as well as easier integration of third-party libraries. Documentation
about 'Rcpp' is provided by several vignettes included in this package, via the
'Rcpp Gallery' site at <http://gallery.rcpp.org>, the paper by Eddelbuettel and
Francois (2011, JSS), and the book by Eddelbuettel (2013, Springer); see
'citation("Rcpp")' for details on these last two.
Author: Dirk Eddelbuettel, Romain Francois, JJ Allaire, Kevin Ushey,
Qiang Kou, Douglas Bates and John Chambers
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between Rcpp versions 0.11.6 dated 2015-05-01 and 0.12.0 dated 2015-07-25
ChangeLog | 127 ++++ DESCRIPTION | 18 MD5 | 269 +++++----- NAMESPACE | 2 R/Attributes.R | 6 R/Rcpp.package.skeleton.R | 2 README.md | 17 build/Rcpp.pdf |binary build/vignette.rds |binary inst/NEWS.Rd | 44 + inst/doc/Rcpp-FAQ.R | 36 - inst/doc/Rcpp-FAQ.Rnw | 57 +- inst/doc/Rcpp-FAQ.pdf |binary inst/doc/Rcpp-attributes.pdf |binary inst/doc/Rcpp-extending.pdf |binary inst/doc/Rcpp-introduction.Rnw | 2 inst/doc/Rcpp-introduction.pdf |binary inst/doc/Rcpp-modules.pdf |binary inst/doc/Rcpp-package.pdf |binary inst/doc/Rcpp-quickref.pdf |binary inst/doc/Rcpp-sugar.pdf |binary inst/doc/Rcpp-unitTests.pdf |binary inst/doc/Rcpp.bib | 42 - inst/include/Rcpp/Benchmark/Timer.h | 2 inst/include/Rcpp/DataFrame.h | 6 inst/include/Rcpp/DottedPairImpl.h | 8 inst/include/Rcpp/Fast.h | 6 inst/include/Rcpp/Function.h | 3 inst/include/Rcpp/Interrupt.h | 2 inst/include/Rcpp/Language.h | 4 inst/include/Rcpp/String.h | 158 ++++- inst/include/Rcpp/Symbol.h | 10 inst/include/Rcpp/api/meat/DottedPairImpl.h | 6 inst/include/Rcpp/api/meat/Rcpp_eval.h | 135 +---- inst/include/Rcpp/api/meat/export.h | 8 inst/include/Rcpp/api/meat/wrap.h | 8 inst/include/Rcpp/config.h | 4 inst/include/Rcpp/internal/Proxy_Iterator.h | 2 inst/include/Rcpp/internal/export.h | 26 inst/include/Rcpp/internal/r_vector.h | 8 inst/include/Rcpp/platform/compiler.h | 5 inst/include/Rcpp/sugar/block/SugarBlock_1.h | 4 inst/include/Rcpp/sugar/block/SugarBlock_2.h | 12 inst/include/Rcpp/sugar/block/SugarBlock_3.h | 4 inst/include/Rcpp/sugar/block/SugarMath.h | 12 inst/include/Rcpp/sugar/block/Vectorized_Math.h | 12 inst/include/Rcpp/sugar/functions/all.h | 8 inst/include/Rcpp/sugar/functions/any.h | 8 inst/include/Rcpp/sugar/functions/clamp.h | 4 inst/include/Rcpp/sugar/functions/complex.h | 4 inst/include/Rcpp/sugar/functions/cumsum.h | 4 inst/include/Rcpp/sugar/functions/diff.h | 20 inst/include/Rcpp/sugar/functions/head.h | 8 inst/include/Rcpp/sugar/functions/ifelse.h | 32 - inst/include/Rcpp/sugar/functions/is_finite.h | 4 inst/include/Rcpp/sugar/functions/is_infinite.h | 4 inst/include/Rcpp/sugar/functions/is_na.h | 12 inst/include/Rcpp/sugar/functions/is_nan.h | 4 inst/include/Rcpp/sugar/functions/lapply.h | 4 inst/include/Rcpp/sugar/functions/mapply/mapply_2.h | 12 inst/include/Rcpp/sugar/functions/mapply/mapply_3.h | 4 inst/include/Rcpp/sugar/functions/max.h | 8 inst/include/Rcpp/sugar/functions/mean.h | 18 inst/include/Rcpp/sugar/functions/min.h | 8 inst/include/Rcpp/sugar/functions/na_omit.h | 14 inst/include/Rcpp/sugar/functions/pmax.h | 8 inst/include/Rcpp/sugar/functions/pmin.h | 8 inst/include/Rcpp/sugar/functions/pow.h | 12 inst/include/Rcpp/sugar/functions/range.h | 8 inst/include/Rcpp/sugar/functions/rep.h | 28 - inst/include/Rcpp/sugar/functions/rep_each.h | 11 inst/include/Rcpp/sugar/functions/rep_len.h | 10 inst/include/Rcpp/sugar/functions/rev.h | 6 inst/include/Rcpp/sugar/functions/sapply.h | 41 + inst/include/Rcpp/sugar/functions/self_match.h | 4 inst/include/Rcpp/sugar/functions/seq_along.h | 10 inst/include/Rcpp/sugar/functions/setdiff.h | 6 inst/include/Rcpp/sugar/functions/sign.h | 6 inst/include/Rcpp/sugar/functions/strings/collapse.h | 4 inst/include/Rcpp/sugar/functions/sum.h | 12 inst/include/Rcpp/sugar/functions/table.h | 6 inst/include/Rcpp/sugar/functions/tail.h | 10 inst/include/Rcpp/sugar/functions/var.h | 23 inst/include/Rcpp/sugar/functions/which_max.h | 18 inst/include/Rcpp/sugar/functions/which_min.h | 18 inst/include/Rcpp/sugar/logical/and.h | 16 inst/include/Rcpp/sugar/logical/or.h | 16 inst/include/Rcpp/sugar/matrix/as_vector.h | 6 inst/include/Rcpp/sugar/matrix/col.h | 2 inst/include/Rcpp/sugar/matrix/diag.h | 6 inst/include/Rcpp/sugar/matrix/lower_tri.h | 2 inst/include/Rcpp/sugar/matrix/outer.h | 2 inst/include/Rcpp/sugar/matrix/row.h | 2 inst/include/Rcpp/sugar/matrix/upper_tri.h | 2 inst/include/Rcpp/sugar/nona/nona.h | 10 inst/include/Rcpp/sugar/operators/Comparator.h | 12 inst/include/Rcpp/sugar/operators/Comparator_With_One_Value.h | 8 inst/include/Rcpp/sugar/operators/divides.h | 64 +- inst/include/Rcpp/sugar/operators/minus.h | 64 +- inst/include/Rcpp/sugar/operators/not.h | 4 inst/include/Rcpp/sugar/operators/plus.h | 64 +- inst/include/Rcpp/sugar/operators/times.h | 64 +- inst/include/Rcpp/sugar/operators/unary_minus.h | 4 inst/include/Rcpp/sugar/tools/iterator.h | 8 inst/include/Rcpp/traits/is_arithmetic.h |only inst/include/Rcpp/traits/traits.h | 1 inst/include/Rcpp/vector/ChildVector.h | 4 inst/include/Rcpp/vector/LazyVector.h | 6 inst/include/Rcpp/vector/ListOf.h | 6 inst/include/Rcpp/vector/Matrix.h | 6 inst/include/Rcpp/vector/MatrixBase.h | 12 inst/include/Rcpp/vector/MatrixColumn.h | 4 inst/include/Rcpp/vector/RangeIndexer.h | 6 inst/include/Rcpp/vector/SubMatrix.h | 2 inst/include/Rcpp/vector/Vector.h | 149 +++-- inst/include/Rcpp/vector/VectorBase.h | 12 inst/include/Rcpp/vector/const_generic_proxy.h | 4 inst/include/Rcpp/vector/const_string_proxy.h | 10 inst/include/Rcpp/vector/generic_proxy.h | 6 inst/include/Rcpp/vector/no_init.h | 6 inst/include/Rcpp/vector/proxy.h | 10 inst/include/Rcpp/vector/string_proxy.h | 10 inst/include/Rcpp/vector/traits.h | 8 inst/unitTests/cpp/Function.cpp | 4 inst/unitTests/cpp/ListOf.cpp | 9 inst/unitTests/cpp/String.cpp | 33 + inst/unitTests/cpp/Vector.cpp | 1 inst/unitTests/runit.Function.R | 6 inst/unitTests/runit.String.R | 18 inst/unitTests/runit.sugar.var.R | 23 man/evalCpp.Rd | 7 src/api.cpp | 2 src/attributes.cpp | 44 + vignettes/Rcpp-FAQ.Rnw | 57 +- vignettes/Rcpp-introduction.Rnw | 2 vignettes/Rcpp.bib | 42 - 136 files changed, 1415 insertions(+), 947 deletions(-)
Title: Simulation and Analysis of Random Fields
Description: Methods for the inference on and the simulation of Gaussian fields are provided, as well as methods for the simulation of extreme value random fields.
Author: Martin Schlather [aut, cre], Alexander Malinowski [aut], Marco Oesting [aut], Daphne Boecker [aut], Kirstin Strokorb [aut], Sebastian Engelke [aut], Johannes Martini [aut], Felix Ballani [aut], Olga Moreva [aut], Christoph Berreth [ctr], Peter Menck [ctr], Sebastian Gross [ctr], Ulrike Ober [ctb], Katharina Burmeister [ctb], Juliane Manitz [ctb], Paulo Ribeiro [ctb], Richard Singleton [ctb], Ben Pfaff [ctb], R Core Team [ctb]
Maintainer: Martin Schlather <schlather@math.uni-mannheim.de>
Diff between RandomFields versions 3.1.0 dated 2015-07-24 and 3.1.1 dated 2015-07-25
DESCRIPTION | 8 ++++---- MD5 | 24 ++++++++++++------------ inst/CITATION | 1 + src/Coordinate_systems.cc | 2 +- src/D.H.cc | 2 +- src/Gneiting.cc | 4 ++-- src/PoissonPolygon.cc | 4 ++-- src/Primitive.cc | 6 +++--- src/circulant.cc | 2 +- src/families.cc | 5 +++-- src/gausslikeli.cc | 3 ++- src/operator.cc | 8 ++++---- src/userinterfaces.cc | 2 +- 13 files changed, 37 insertions(+), 34 deletions(-)
Title: Provides Tests and Graphics for Assessing Tests of Equivalence
Description: Provides statistical tests and graphics for assessing tests
of equivalence. Such tests have similarity as the alternative
hypothesis instead of the null. Sample data sets are included.
Author: Andrew Robinson <A.Robinson@ms.unimelb.edu.au>
Maintainer: Andrew Robinson <A.Robinson@ms.unimelb.edu.au>
Diff between equivalence versions 0.6.0 dated 2014-06-06 and 0.7.0 dated 2015-07-25
ChangeLog | 15 +++++++++++++++ DESCRIPTION | 20 ++++++++++---------- MD5 | 22 +++++++++++----------- NAMESPACE | 9 ++++++++- R/equivalence.xyplot.R | 1 + R/tost.R | 16 ++++++++-------- R/tost.stat.R | 6 +++--- data/pref.4PG.rda |binary data/pref.LAI.rda |binary data/ufc.rda |binary man/equivalence.xyplot.Rd | 3 +-- man/tost.Rd | 2 +- 12 files changed, 58 insertions(+), 36 deletions(-)