Title: Visualizes Random Forests with Feature Contributions
Description: Enables users to form appropriate visualizations of high dimensional mapping curvatures of random forests.
Author: Soeren Havelund Welling
Maintainer: Soeren Havelund Welling <SOWE@DTU.DK>
Diff between forestFloor versions 1.8.4 dated 2015-08-12 and 1.8.5 dated 2015-08-12
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- tests/ggplotUsage.R | 2 +- tests/stdUsage.R | 2 +- tests/testBinaryClass.R | 2 +- tests/testMultiClass.cpp.R | 2 +- 6 files changed, 12 insertions(+), 12 deletions(-)
Title: Provides Access to Git Repositories
Description: Interface to the 'libgit2' library, which is a pure C
implementation of the 'Git' core methods. Provides access to 'Git'
repositories to extract data and running some basic 'Git'
commands.
Author: See AUTHORS file.
Maintainer: Stefan Widgren <stefan.widgren@gmail.com>
Diff between git2r versions 0.10.1 dated 2015-05-07 and 0.11.0 dated 2015-08-12
git2r-0.10.1/git2r/src/libgit2/include/git2/push.h |only git2r-0.11.0/git2r/DESCRIPTION | 24 git2r-0.11.0/git2r/MD5 | 529 ++-- git2r-0.11.0/git2r/NAMESPACE | 12 git2r-0.11.0/git2r/NEWS | 53 git2r-0.11.0/git2r/R/S4_classes.r | 37 git2r-0.11.0/git2r/R/blob.r | 6 git2r-0.11.0/git2r/R/branch.r | 22 git2r-0.11.0/git2r/R/bundle_r_package.r | 2 git2r-0.11.0/git2r/R/checkout.r | 103 git2r-0.11.0/git2r/R/commit.r | 83 git2r-0.11.0/git2r/R/contributions.r | 17 git2r-0.11.0/git2r/R/credential.r | 43 git2r-0.11.0/git2r/R/fetch.r | 4 git2r-0.11.0/git2r/R/git2r.r | 2 git2r-0.11.0/git2r/R/index.r | 12 git2r-0.11.0/git2r/R/libgit2.r | 2 git2r-0.11.0/git2r/R/merge.r | 3 git2r-0.11.0/git2r/R/note.r | 2 git2r-0.11.0/git2r/R/plot.r | 18 git2r-0.11.0/git2r/R/pull.r | 4 git2r-0.11.0/git2r/R/punch_card.r |only git2r-0.11.0/git2r/R/push.r | 30 git2r-0.11.0/git2r/R/reference.r | 21 git2r-0.11.0/git2r/R/reflog.r | 2 git2r-0.11.0/git2r/R/refspec.r |only git2r-0.11.0/git2r/R/remote.r | 20 git2r-0.11.0/git2r/R/repository.r | 149 - git2r-0.11.0/git2r/R/reset.r | 2 git2r-0.11.0/git2r/R/revparse.r | 4 git2r-0.11.0/git2r/R/stash.r | 36 git2r-0.11.0/git2r/R/status.r | 25 git2r-0.11.0/git2r/R/tag.r | 38 git2r-0.11.0/git2r/R/tree.r | 4 git2r-0.11.0/git2r/R/when.r | 10 git2r-0.11.0/git2r/configure | 107 git2r-0.11.0/git2r/configure.win | 121 + git2r-0.11.0/git2r/inst/AUTHORS | 6 git2r-0.11.0/git2r/inst/COPYRIGHTS | 5 git2r-0.11.0/git2r/man/add-methods.Rd | 8 git2r-0.11.0/git2r/man/add_session_info.Rd |only git2r-0.11.0/git2r/man/branches-methods.Rd | 9 git2r-0.11.0/git2r/man/clone-methods.Rd | 8 git2r-0.11.0/git2r/man/commits-methods.Rd | 8 git2r-0.11.0/git2r/man/contributions-methods.Rd | 9 git2r-0.11.0/git2r/man/cred_env-class.Rd |only git2r-0.11.0/git2r/man/cred_env-methods.Rd |only git2r-0.11.0/git2r/man/cred_ssh_key-methods.Rd | 3 git2r-0.11.0/git2r/man/get_refspec.Rd |only git2r-0.11.0/git2r/man/is_bare-methods.Rd | 6 git2r-0.11.0/git2r/man/is_detached-methods.Rd | 6 git2r-0.11.0/git2r/man/is_empty-methods.Rd | 6 git2r-0.11.0/git2r/man/is_shallow-methods.Rd | 6 git2r-0.11.0/git2r/man/lookup_repository.Rd |only git2r-0.11.0/git2r/man/merge-methods.Rd | 2 git2r-0.11.0/git2r/man/punch_card-methods.Rd |only git2r-0.11.0/git2r/man/references-methods.Rd | 9 git2r-0.11.0/git2r/man/remotes-methods.Rd | 9 git2r-0.11.0/git2r/man/stash_list-methods.Rd | 9 git2r-0.11.0/git2r/man/status-methods.Rd | 14 git2r-0.11.0/git2r/man/tags-methods.Rd | 9 git2r-0.11.0/git2r/man/workdir-methods.Rd | 9 git2r-0.11.0/git2r/src/Makevars.in | 61 git2r-0.11.0/git2r/src/Makevars.win | 94 git2r-0.11.0/git2r/src/git2r.c | 7 git2r-0.11.0/git2r/src/git2r_arg.c | 8 git2r-0.11.0/git2r/src/git2r_blame.c | 10 git2r-0.11.0/git2r/src/git2r_blob.c | 54 git2r-0.11.0/git2r/src/git2r_branch.c | 203 - git2r-0.11.0/git2r/src/git2r_checkout.c | 14 git2r-0.11.0/git2r/src/git2r_clone.c | 73 git2r-0.11.0/git2r/src/git2r_clone.h | 1 git2r-0.11.0/git2r/src/git2r_commit.c | 66 git2r-0.11.0/git2r/src/git2r_config.c | 139 + git2r-0.11.0/git2r/src/git2r_config.h | 2 git2r-0.11.0/git2r/src/git2r_cred.c | 199 + git2r-0.11.0/git2r/src/git2r_diff.c | 96 git2r-0.11.0/git2r/src/git2r_error.c | 79 git2r-0.11.0/git2r/src/git2r_error.h | 20 git2r-0.11.0/git2r/src/git2r_graph.c | 22 git2r-0.11.0/git2r/src/git2r_index.c | 35 git2r-0.11.0/git2r/src/git2r_index.h | 2 git2r-0.11.0/git2r/src/git2r_merge.c | 78 git2r-0.11.0/git2r/src/git2r_note.c | 99 git2r-0.11.0/git2r/src/git2r_object.c | 14 git2r-0.11.0/git2r/src/git2r_odb.c | 52 git2r-0.11.0/git2r/src/git2r_push.c | 53 git2r-0.11.0/git2r/src/git2r_reference.c | 62 git2r-0.11.0/git2r/src/git2r_reference.h | 1 git2r-0.11.0/git2r/src/git2r_reflog.c | 10 git2r-0.11.0/git2r/src/git2r_remote.c | 131 - git2r-0.11.0/git2r/src/git2r_repository.c | 74 git2r-0.11.0/git2r/src/git2r_reset.c | 12 git2r-0.11.0/git2r/src/git2r_revparse.c | 18 git2r-0.11.0/git2r/src/git2r_revwalk.c | 46 git2r-0.11.0/git2r/src/git2r_signature.c | 8 git2r-0.11.0/git2r/src/git2r_stash.c | 38 git2r-0.11.0/git2r/src/git2r_status.c | 20 git2r-0.11.0/git2r/src/git2r_tag.c | 178 + git2r-0.11.0/git2r/src/git2r_transfer.h | 12 git2r-0.11.0/git2r/src/libgit2/attr.c | 9 git2r-0.11.0/git2r/src/libgit2/attr_file.c | 70 git2r-0.11.0/git2r/src/libgit2/attr_file.h | 4 git2r-0.11.0/git2r/src/libgit2/blame.c | 4 git2r-0.11.0/git2r/src/libgit2/blame_git.c | 25 git2r-0.11.0/git2r/src/libgit2/blob.c | 13 git2r-0.11.0/git2r/src/libgit2/branch.c | 22 git2r-0.11.0/git2r/src/libgit2/buf_text.c | 10 git2r-0.11.0/git2r/src/libgit2/buf_text.h | 3 git2r-0.11.0/git2r/src/libgit2/buffer.c | 14 git2r-0.11.0/git2r/src/libgit2/buffer.h | 2 git2r-0.11.0/git2r/src/libgit2/cache.c | 9 git2r-0.11.0/git2r/src/libgit2/checkout.c | 96 git2r-0.11.0/git2r/src/libgit2/clone.c | 62 git2r-0.11.0/git2r/src/libgit2/commit.c | 65 git2r-0.11.0/git2r/src/libgit2/common.h | 22 git2r-0.11.0/git2r/src/libgit2/config.c | 31 git2r-0.11.0/git2r/src/libgit2/config.h | 6 git2r-0.11.0/git2r/src/libgit2/config_file.c | 1006 ++++----- git2r-0.11.0/git2r/src/libgit2/crlf.c | 56 git2r-0.11.0/git2r/src/libgit2/curl_stream.c |only git2r-0.11.0/git2r/src/libgit2/curl_stream.h |only git2r-0.11.0/git2r/src/libgit2/describe.c | 2 git2r-0.11.0/git2r/src/libgit2/diff.c | 358 ++- git2r-0.11.0/git2r/src/libgit2/diff.h | 22 git2r-0.11.0/git2r/src/libgit2/diff_driver.c | 2 git2r-0.11.0/git2r/src/libgit2/diff_file.c | 36 git2r-0.11.0/git2r/src/libgit2/diff_file.h | 6 git2r-0.11.0/git2r/src/libgit2/diff_patch.c | 337 ++- git2r-0.11.0/git2r/src/libgit2/diff_patch.h | 36 git2r-0.11.0/git2r/src/libgit2/diff_print.c | 282 +- git2r-0.11.0/git2r/src/libgit2/diff_tform.c | 88 git2r-0.11.0/git2r/src/libgit2/errors.c | 115 - git2r-0.11.0/git2r/src/libgit2/fetch.c | 37 git2r-0.11.0/git2r/src/libgit2/fetch.h | 11 git2r-0.11.0/git2r/src/libgit2/filebuf.c | 9 git2r-0.11.0/git2r/src/libgit2/filebuf.h | 2 git2r-0.11.0/git2r/src/libgit2/fileops.c | 8 git2r-0.11.0/git2r/src/libgit2/filter.c | 67 git2r-0.11.0/git2r/src/libgit2/fnmatch.c | 10 git2r-0.11.0/git2r/src/libgit2/global.c | 82 git2r-0.11.0/git2r/src/libgit2/global.h | 5 git2r-0.11.0/git2r/src/libgit2/ident.c | 4 git2r-0.11.0/git2r/src/libgit2/ignore.c | 57 git2r-0.11.0/git2r/src/libgit2/ignore.h | 2 git2r-0.11.0/git2r/src/libgit2/include/git2.h | 2 git2r-0.11.0/git2r/src/libgit2/include/git2/blob.h | 10 git2r-0.11.0/git2r/src/libgit2/include/git2/checkout.h | 11 git2r-0.11.0/git2r/src/libgit2/include/git2/clone.h | 13 git2r-0.11.0/git2r/src/libgit2/include/git2/commit.h | 11 git2r-0.11.0/git2r/src/libgit2/include/git2/cred_helpers.h | 4 git2r-0.11.0/git2r/src/libgit2/include/git2/describe.h | 2 git2r-0.11.0/git2r/src/libgit2/include/git2/diff.h | 105 git2r-0.11.0/git2r/src/libgit2/include/git2/errors.h | 18 git2r-0.11.0/git2r/src/libgit2/include/git2/filter.h | 53 git2r-0.11.0/git2r/src/libgit2/include/git2/index.h | 51 git2r-0.11.0/git2r/src/libgit2/include/git2/merge.h | 3 git2r-0.11.0/git2r/src/libgit2/include/git2/notes.h | 4 git2r-0.11.0/git2r/src/libgit2/include/git2/odb.h | 2 git2r-0.11.0/git2r/src/libgit2/include/git2/odb_backend.h | 4 git2r-0.11.0/git2r/src/libgit2/include/git2/pack.h | 12 git2r-0.11.0/git2r/src/libgit2/include/git2/rebase.h | 52 git2r-0.11.0/git2r/src/libgit2/include/git2/remote.h | 523 ++-- git2r-0.11.0/git2r/src/libgit2/include/git2/repository.h | 2 git2r-0.11.0/git2r/src/libgit2/include/git2/reset.h | 5 git2r-0.11.0/git2r/src/libgit2/include/git2/revwalk.h | 18 git2r-0.11.0/git2r/src/libgit2/include/git2/stash.h | 139 + git2r-0.11.0/git2r/src/libgit2/include/git2/status.h | 1 git2r-0.11.0/git2r/src/libgit2/include/git2/submodule.h | 132 - git2r-0.11.0/git2r/src/libgit2/include/git2/sys/config.h | 2 git2r-0.11.0/git2r/src/libgit2/include/git2/sys/diff.h | 8 git2r-0.11.0/git2r/src/libgit2/include/git2/sys/filter.h | 5 git2r-0.11.0/git2r/src/libgit2/include/git2/sys/odb_backend.h | 4 git2r-0.11.0/git2r/src/libgit2/include/git2/sys/refdb_backend.h | 7 git2r-0.11.0/git2r/src/libgit2/include/git2/sys/stream.h | 2 git2r-0.11.0/git2r/src/libgit2/include/git2/sys/transport.h | 38 git2r-0.11.0/git2r/src/libgit2/include/git2/transport.h | 62 git2r-0.11.0/git2r/src/libgit2/include/git2/types.h | 31 git2r-0.11.0/git2r/src/libgit2/include/git2/version.h | 6 git2r-0.11.0/git2r/src/libgit2/index.c | 509 +++- git2r-0.11.0/git2r/src/libgit2/index.h | 5 git2r-0.11.0/git2r/src/libgit2/indexer.c | 24 git2r-0.11.0/git2r/src/libgit2/iterator.c | 276 ++ git2r-0.11.0/git2r/src/libgit2/iterator.h | 25 git2r-0.11.0/git2r/src/libgit2/merge.c | 208 - git2r-0.11.0/git2r/src/libgit2/merge.h | 18 git2r-0.11.0/git2r/src/libgit2/netops.c | 6 git2r-0.11.0/git2r/src/libgit2/netops.h | 4 git2r-0.11.0/git2r/src/libgit2/notes.c | 61 git2r-0.11.0/git2r/src/libgit2/odb.c | 26 git2r-0.11.0/git2r/src/libgit2/odb.h | 2 git2r-0.11.0/git2r/src/libgit2/odb_loose.c | 4 git2r-0.11.0/git2r/src/libgit2/odb_pack.c | 2 git2r-0.11.0/git2r/src/libgit2/openssl_stream.c | 159 + git2r-0.11.0/git2r/src/libgit2/pack-objects.c | 64 git2r-0.11.0/git2r/src/libgit2/pack-objects.h | 1 git2r-0.11.0/git2r/src/libgit2/pack.c | 28 git2r-0.11.0/git2r/src/libgit2/path.c | 461 ++-- git2r-0.11.0/git2r/src/libgit2/path.h | 201 + git2r-0.11.0/git2r/src/libgit2/posix.h | 1 git2r-0.11.0/git2r/src/libgit2/push.c | 87 git2r-0.11.0/git2r/src/libgit2/push.h | 35 git2r-0.11.0/git2r/src/libgit2/rebase.c | 264 +- git2r-0.11.0/git2r/src/libgit2/refdb_fs.c | 7 git2r-0.11.0/git2r/src/libgit2/reflog.c | 2 git2r-0.11.0/git2r/src/libgit2/refs.c | 10 git2r-0.11.0/git2r/src/libgit2/refspec.c | 9 git2r-0.11.0/git2r/src/libgit2/remote.c | 689 +++--- git2r-0.11.0/git2r/src/libgit2/remote.h | 4 git2r-0.11.0/git2r/src/libgit2/repository.c | 60 git2r-0.11.0/git2r/src/libgit2/repository.h | 1 git2r-0.11.0/git2r/src/libgit2/reset.c | 7 git2r-0.11.0/git2r/src/libgit2/revwalk.c | 28 git2r-0.11.0/git2r/src/libgit2/settings.c | 6 git2r-0.11.0/git2r/src/libgit2/stash.c | 455 ++++ git2r-0.11.0/git2r/src/libgit2/status.c | 6 git2r-0.11.0/git2r/src/libgit2/stransport_stream.c |only git2r-0.11.0/git2r/src/libgit2/stransport_stream.h |only git2r-0.11.0/git2r/src/libgit2/stream.h | 15 git2r-0.11.0/git2r/src/libgit2/submodule.c | 1094 +++------- git2r-0.11.0/git2r/src/libgit2/submodule.h | 24 git2r-0.11.0/git2r/src/libgit2/sysdir.c | 30 git2r-0.11.0/git2r/src/libgit2/thread-utils.c | 2 git2r-0.11.0/git2r/src/libgit2/tls_stream.c |only git2r-0.11.0/git2r/src/libgit2/tls_stream.h |only git2r-0.11.0/git2r/src/libgit2/transaction.c | 1 git2r-0.11.0/git2r/src/libgit2/transport.c | 8 git2r-0.11.0/git2r/src/libgit2/transports/cred.c | 56 git2r-0.11.0/git2r/src/libgit2/transports/git.c | 6 git2r-0.11.0/git2r/src/libgit2/transports/http.c | 39 git2r-0.11.0/git2r/src/libgit2/transports/local.c | 122 - git2r-0.11.0/git2r/src/libgit2/transports/smart.c | 2 git2r-0.11.0/git2r/src/libgit2/transports/smart.h | 2 git2r-0.11.0/git2r/src/libgit2/transports/smart_pkt.c | 2 git2r-0.11.0/git2r/src/libgit2/transports/smart_protocol.c | 22 git2r-0.11.0/git2r/src/libgit2/transports/ssh.c | 65 git2r-0.11.0/git2r/src/libgit2/transports/winhttp.c | 73 git2r-0.11.0/git2r/src/libgit2/tree.c | 4 git2r-0.11.0/git2r/src/libgit2/unix/posix.h | 6 git2r-0.11.0/git2r/src/libgit2/util.c | 66 git2r-0.11.0/git2r/src/libgit2/util.h | 134 + git2r-0.11.0/git2r/src/libgit2/win32/path_w32.c | 75 git2r-0.11.0/git2r/src/libgit2/win32/path_w32.h | 3 git2r-0.11.0/git2r/src/libgit2/win32/posix.h | 7 git2r-0.11.0/git2r/src/libgit2/win32/posix_w32.c | 160 - git2r-0.11.0/git2r/src/libgit2/win32/pthread.c | 2 git2r-0.11.0/git2r/src/libgit2/win32/utf-conv.c | 4 git2r-0.11.0/git2r/src/libgit2/win32/utf-conv.h | 4 git2r-0.11.0/git2r/src/libgit2/win32/w32_buffer.c |only git2r-0.11.0/git2r/src/libgit2/win32/w32_buffer.h |only git2r-0.11.0/git2r/src/libgit2/win32/w32_util.h | 82 git2r-0.11.0/git2r/src/libgit2/xdiff/xdiff.h | 16 git2r-0.11.0/git2r/src/libgit2/xdiff/xdiffi.c | 50 git2r-0.11.0/git2r/src/libgit2/xdiff/xdiffi.h | 1 git2r-0.11.0/git2r/src/libgit2/xdiff/xemit.c | 49 git2r-0.11.0/git2r/src/libgit2/xdiff/xemit.h | 2 git2r-0.11.0/git2r/src/libgit2/xdiff/xhistogram.c | 2 git2r-0.11.0/git2r/src/libgit2/xdiff/xmerge.c | 4 git2r-0.11.0/git2r/src/libgit2/xdiff/xpatience.c | 2 git2r-0.11.0/git2r/src/libgit2/xdiff/xprepare.c | 21 git2r-0.11.0/git2r/src/libgit2/xdiff/xutils.c | 42 git2r-0.11.0/git2r/src/libgit2/xdiff/xutils.h | 1 git2r-0.11.0/git2r/tests/add-force.R |only git2r-0.11.0/git2r/tests/branch.R | 35 git2r-0.11.0/git2r/tests/checkout_branch.R | 26 git2r-0.11.0/git2r/tests/clone_branch.R |only git2r-0.11.0/git2r/tests/merge.R | 4 git2r-0.11.0/git2r/tests/merge_named_branch.R | 4 git2r-0.11.0/git2r/tests/pull.R | 6 git2r-0.11.0/git2r/tests/push.R | 25 git2r-0.11.0/git2r/tests/reference.R |only git2r-0.11.0/git2r/tests/refspec.R |only git2r-0.11.0/git2r/tests/remove.R |only git2r-0.11.0/git2r/tests/repository.R | 5 git2r-0.11.0/git2r/tests/stash.R | 6 git2r-0.11.0/git2r/tests/tag.R | 8 git2r-0.11.0/git2r/tools/missing |only 277 files changed, 9304 insertions(+), 5098 deletions(-)
Title: Convert Data from and to 'geoJSON' or 'topoJSON'
Description: Convert data to 'geoJSON' or 'topoJSON' from various R classes,
including vectors, lists, data frames, shape files, and spatial
classes. 'geojsonio' does not aim to replace packages like 'sp', 'rgdal', 'rgeos',
but rather aims to be a high level client to simplify conversions of data
from and to 'geoJSON' and 'topoJSON'.
Author: Scott Chamberlain [aut, cre],
Andy Teucher [aut]
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>
Diff between geojsonio versions 0.1.0 dated 2015-04-30 and 0.1.4 dated 2015-08-12
geojsonio-0.1.0/geojsonio/R/file_to_geojson.R |only geojsonio-0.1.0/geojsonio/R/geojson_write.R |only geojsonio-0.1.0/geojsonio/R/zzz.R |only geojsonio-0.1.0/geojsonio/inst/doc/geojson_spec.R |only geojsonio-0.1.0/geojsonio/inst/doc/geojsonio_vignette.R |only geojsonio-0.1.0/geojsonio/inst/vign/figure/unnamed-chunk-12-1.png |only geojsonio-0.1.0/geojsonio/inst/vign/figure/unnamed-chunk-15-1.png |only geojsonio-0.1.0/geojsonio/inst/vign/figure/unnamed-chunk-22-1.png |only geojsonio-0.1.0/geojsonio/tests/testthat/myfile.geojson |only geojsonio-0.1.4/geojsonio/DESCRIPTION | 15 geojsonio-0.1.4/geojsonio/MD5 | 114 ++-- geojsonio-0.1.4/geojsonio/NAMESPACE | 22 geojsonio-0.1.4/geojsonio/NEWS | 28 + geojsonio-0.1.4/geojsonio/R/as.json.R | 3 geojsonio-0.1.4/geojsonio/R/as_spatial_methods.R | 15 geojsonio-0.1.4/geojsonio/R/construction.R | 24 geojsonio-0.1.4/geojsonio/R/file_to_geojson.r |only geojsonio-0.1.4/geojsonio/R/geojson_json.R | 3 geojsonio-0.1.4/geojsonio/R/geojson_list.R | 9 geojsonio-0.1.4/geojsonio/R/geojson_read.R | 72 ++ geojsonio-0.1.4/geojsonio/R/geojson_write.r |only geojsonio-0.1.4/geojsonio/R/geojsonio-package.R | 46 + geojsonio-0.1.4/geojsonio/R/mapleaflet.R |only geojsonio-0.1.4/geojsonio/R/onLoad.R | 4 geojsonio-0.1.4/geojsonio/R/projections.R | 15 geojsonio-0.1.4/geojsonio/R/zzz.r |only geojsonio-0.1.4/geojsonio/README.md | 86 ++- geojsonio-0.1.4/geojsonio/build/vignette.rds |binary geojsonio-0.1.4/geojsonio/inst/doc/geojson_spec.Rmd | 10 geojsonio-0.1.4/geojsonio/inst/doc/geojson_spec.html | 98 ++- geojsonio-0.1.4/geojsonio/inst/doc/geojsonio_vignette.Rmd | 260 +++++----- geojsonio-0.1.4/geojsonio/inst/doc/geojsonio_vignette.html | 242 ++++----- geojsonio-0.1.4/geojsonio/inst/doc/maps.Rmd |only geojsonio-0.1.4/geojsonio/inst/doc/maps.html |only geojsonio-0.1.4/geojsonio/inst/examples/feature_collection.geojson |only geojsonio-0.1.4/geojsonio/inst/ignore/postgis-play.R |only geojsonio-0.1.4/geojsonio/inst/ignore/postgis.R |only geojsonio-0.1.4/geojsonio/inst/ignore/postgis_code.R |only geojsonio-0.1.4/geojsonio/inst/img/unnamed-chunk-18-1.png |only geojsonio-0.1.4/geojsonio/inst/img/unnamed-chunk-20-1.png |only geojsonio-0.1.4/geojsonio/inst/js/turf_extent.js |only geojsonio-0.1.4/geojsonio/inst/vign/figure/leafletmap1.png |only geojsonio-0.1.4/geojsonio/inst/vign/figure/leafletmap2.png |only geojsonio-0.1.4/geojsonio/inst/vign/figure/map_leaf1.png |only geojsonio-0.1.4/geojsonio/inst/vign/figure/map_leaf2.png |only geojsonio-0.1.4/geojsonio/inst/vign/figure/maps_dataframe.png |only geojsonio-0.1.4/geojsonio/inst/vign/figure/maps_sppixels.png |only geojsonio-0.1.4/geojsonio/inst/vign/figure/maps_sppts.png |only geojsonio-0.1.4/geojsonio/inst/vign/figure/unnamed-chunk-17-1.png |binary geojsonio-0.1.4/geojsonio/inst/vign/geojson_spec.Rmd | 1 geojsonio-0.1.4/geojsonio/inst/vign/geojson_spec.md | 1 geojsonio-0.1.4/geojsonio/inst/vign/geojsonio_vignette.Rmd | 51 - geojsonio-0.1.4/geojsonio/inst/vign/geojsonio_vignette.md | 89 +-- geojsonio-0.1.4/geojsonio/inst/vign/maps.Rmd |only geojsonio-0.1.4/geojsonio/inst/vign/maps.md |only geojsonio-0.1.4/geojsonio/man/file_to_geojson.Rd | 13 geojsonio-0.1.4/geojsonio/man/geojson-add.Rd | 2 geojsonio-0.1.4/geojsonio/man/geojson_read.Rd | 43 + geojsonio-0.1.4/geojsonio/man/geojson_write.Rd | 28 - geojsonio-0.1.4/geojsonio/man/geojsonio.Rd | 38 + geojsonio-0.1.4/geojsonio/man/map_leaf.Rd |only geojsonio-0.1.4/geojsonio/man/pipe.Rd | 2 geojsonio-0.1.4/geojsonio/tests/test-all.R |only geojsonio-0.1.4/geojsonio/tests/testthat/helper-geojsonio.R |only geojsonio-0.1.4/geojsonio/tests/testthat/test-as.json.R | 2 geojsonio-0.1.4/geojsonio/tests/testthat/test-as.location.R | 9 geojsonio-0.1.4/geojsonio/tests/testthat/test-construction.R |only geojsonio-0.1.4/geojsonio/tests/testthat/test-file_to_geojson.R |only geojsonio-0.1.4/geojsonio/tests/testthat/test-geojson_json.R | 16 geojsonio-0.1.4/geojsonio/tests/testthat/test-geojson_list.R | 15 geojsonio-0.1.4/geojsonio/tests/testthat/test-geojson_read.R |only geojsonio-0.1.4/geojsonio/tests/testthat/test-geojson_write.R |only geojsonio-0.1.4/geojsonio/tests/testthat/test-lint.R |only geojsonio-0.1.4/geojsonio/tests/testthat/test-map_gist.R |only geojsonio-0.1.4/geojsonio/tests/testthat/test-onload.R |only geojsonio-0.1.4/geojsonio/tests/testthat/test-projections.R |only geojsonio-0.1.4/geojsonio/tests/testthat/test-rbind_fill.R |only geojsonio-0.1.4/geojsonio/vignettes/geojson_spec.Rmd | 10 geojsonio-0.1.4/geojsonio/vignettes/geojsonio_vignette.Rmd | 260 +++++----- geojsonio-0.1.4/geojsonio/vignettes/maps.Rmd |only 80 files changed, 984 insertions(+), 662 deletions(-)
Title: Interactive Graphics for Portfolio Data
Description: Creates an interactive graphics
interface to visualize backtest results of different financial
instruments, such as equities, futures, and credit default swaps.
The package does not run backtests on the given data set but
displays a graphical explanation of the backtest results. Users can
look at backtest graphics for different instruments, investment
strategies, and portfolios. Summary statistics of different
portfolio holdings are shown in the left panel, and interactive
plots of profit and loss (P\&L), net market value (NMV) and
gross market value (GMV) are displayed in the right panel.
Author: as.person(c(
"David Kane <dave.kane@gmail.com> [aut]",
"Ziqi Lu <ziqi.lu@williams.edu> [aut]",
"Fan Zhang <fan.zhang@williams.edu> [aut]",
"Miller Zijie Zhu <zijie.miller.zhu@gmail.com> [aut]"
))
Maintainer: Miller Zijie Zhu <zijie.miller.zhu@gmail.com>
Diff between backtestGraphics versions 0.1-3 dated 2015-08-11 and 0.1.4 dated 2015-08-12
DESCRIPTION | 8 - MD5 | 12 +- R/backtestGraphics.R | 175 +++++++++++++++++++-------------------- inst/doc/backtestGraphics.pdf |binary man/backtestGraphics.Rd | 104 +++++++++++------------ tests/testthat/test_slice_data.R | 24 +++-- tests/testthat/test_sum_data.R | 6 - 7 files changed, 172 insertions(+), 157 deletions(-)
More information about backtestGraphics at CRAN
Permanent link
Title: Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for
Phylogenetic Comparative Hypotheses
Description: Fits multivariate Ornstein-Uhlenbeck types of models to continues trait data from species related by a common evolutionary history.
Author: Krzysztof Bartoszek <bartoszekkj@gmail.com>
Maintainer: Krzysztof Bartoszek <bartoszekkj@gmail.com>
Diff between mvSLOUCH versions 1.2 dated 2015-07-26 and 1.2.1 dated 2015-08-12
DESCRIPTION | 6 +++--- MD5 | 6 +++--- R/evolmodelest.R | 20 ++++++++++---------- man/estimate.evolutionary.model.Rd | 9 +++++---- 4 files changed, 21 insertions(+), 20 deletions(-)
Title: Design and Analysis of Mixture Experiments
Description: Functions for creating designs for mixture experiments, making ternary contour plots, and making mixture effect plots.
Author: John Lawson [aut, cre],
Cameron Willden [aut],
Greg Piepel [ctb]
Maintainer: John Lawson <lawson@byu.edu>
Diff between mixexp versions 1.2.1 dated 2015-03-16 and 1.2.3 dated 2015-08-12
DESCRIPTION | 25 +++++++++++-------------- MD5 | 20 ++++++++++---------- NAMESPACE | 4 ++++ R/MixModel.R | 2 +- data/Burn.rda |binary data/SneeMq.rda |binary data/conmx.rda |binary data/etch.rda |binary data/fishp.rda |binary man/MixModel.Rd | 17 +++++++++-------- man/mixexp-package.Rd | 2 -- 11 files changed, 35 insertions(+), 35 deletions(-)
Title: Visualizes Random Forests with Feature Contributions
Description: Enables users to form appropriate visualizations of high dimensional mapping curvatures of random forests.
Author: Soeren Havelund Welling
Maintainer: Soeren Havelund Welling <SOWE@DTU.DK>
Diff between forestFloor versions 1.8.3 dated 2015-08-02 and 1.8.4 dated 2015-08-12
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- tests/ggplotUsage.R | 2 +- tests/stdUsage.R | 1 + tests/testBinaryClass.R | 1 + tests/testMultiClass.cpp.R | 1 + 6 files changed, 12 insertions(+), 9 deletions(-)
Title: Climate Classification According to Several Indices
Description: Classification of climate according to Koeppen - Geiger, of aridity
indices, of continentality indices, of water balance after Thornthwaite, of
viticultural bioclimatic indices. Drawing climographs: Thornthwaite, Peguy,
Bagnouls-Gaussen.
Author: Emanuele Eccel [aut, cre],
Emanuele Cordano [aut],
Giambattista Toller [aut],
Fabio Zottele [ctb]
Maintainer: Emanuele Eccel <emanuele.eccel@fmach.it>
Diff between ClimClass versions 1.0 dated 2014-12-03 and 2.0.1 dated 2015-08-12
ClimClass-1.0/ClimClass/README.md |only ClimClass-1.0/ClimClass/inst/stuff |only ClimClass-1.0/ClimClass/man/ClimClass-package.Rd |only ClimClass-2.0.1/ClimClass/DESCRIPTION | 32 - ClimClass-2.0.1/ClimClass/MD5 | 67 +- ClimClass-2.0.1/ClimClass/NAMESPACE | 19 ClimClass-2.0.1/ClimClass/R/Bagn_Gau.R | 233 +++++----- ClimClass-2.0.1/ClimClass/R/ClimClass.R |only ClimClass-2.0.1/ClimClass/R/RDI.R |only ClimClass-2.0.1/ClimClass/R/Trent_climate.R |only ClimClass-2.0.1/ClimClass/R/as.datcli.R | 186 ++++---- ClimClass-2.0.1/ClimClass/R/climate.R | 105 ++-- ClimClass-2.0.1/ClimClass/R/contin.R | 26 - ClimClass-2.0.1/ClimClass/R/koeppen_geiger.R | 359 +++++++++------- ClimClass-2.0.1/ClimClass/R/oiv_ind.R |only ClimClass-2.0.1/ClimClass/R/peguy.R | 296 ++++++------- ClimClass-2.0.1/ClimClass/R/plot_quant.R | 235 +++++----- ClimClass-2.0.1/ClimClass/data/Trent_climate.RData |binary ClimClass-2.0.1/ClimClass/data/datalist |only ClimClass-2.0.1/ClimClass/man/ClimClass.Rd |only ClimClass-2.0.1/ClimClass/man/ExAtRa.Rd | 29 - ClimClass-2.0.1/ClimClass/man/P.Rd |only ClimClass-2.0.1/ClimClass/man/RDI.Rd |only ClimClass-2.0.1/ClimClass/man/Tm.Rd |only ClimClass-2.0.1/ClimClass/man/Tn.Rd |only ClimClass-2.0.1/ClimClass/man/Trent_climate.Rd | 63 -- ClimClass-2.0.1/ClimClass/man/Tx.Rd |only ClimClass-2.0.1/ClimClass/man/W_balance.Rd |only ClimClass-2.0.1/ClimClass/man/arid.Rd | 119 +---- ClimClass-2.0.1/ClimClass/man/arid_ind_tables.Rd |only ClimClass-2.0.1/ClimClass/man/as.datcli.Rd | 41 - ClimClass-2.0.1/ClimClass/man/bagn_gau.Rd | 64 -- ClimClass-2.0.1/ClimClass/man/clima_81_10.Rd |only ClimClass-2.0.1/ClimClass/man/climate.Rd | 35 - ClimClass-2.0.1/ClimClass/man/coeff_rad.Rd |only ClimClass-2.0.1/ClimClass/man/contin.Rd | 79 +-- ClimClass-2.0.1/ClimClass/man/continental_ind_tables.Rd |only ClimClass-2.0.1/ClimClass/man/coord_elev.Rd |only ClimClass-2.0.1/ClimClass/man/koeppen_geiger.Rd | 105 ++-- ClimClass-2.0.1/ClimClass/man/lista_cli.Rd |only ClimClass-2.0.1/ClimClass/man/oiv_ind.Rd |only ClimClass-2.0.1/ClimClass/man/peguy.Rd | 46 -- ClimClass-2.0.1/ClimClass/man/plot.thornthwaite.Rd | 78 +-- ClimClass-2.0.1/ClimClass/man/quantiles.Rd |only ClimClass-2.0.1/ClimClass/man/thornt_lst.Rd |only ClimClass-2.0.1/ClimClass/man/thornthwaite.Rd | 124 +---- 46 files changed, 1103 insertions(+), 1238 deletions(-)
Title: Create "Table 1" to Describe Baseline Characteristics
Description: Creates "Table 1", i.e., description of baseline patient
characteristics, which is essential in every medical research.
Supports both continuous and categorical variables, as well as
p-values and standardized mean differences. Weighted data are
supported via the survey package. See github for a screencast.
tableone was inspired by descriptive statistics functions in
Deducer , a Java-based GUI package by Ian Fellows. This package
does not require GUI or Java, and intended for command-line users.
Author: Kazuki Yoshida, Justin Bohn.
Maintainer: Kazuki Yoshida <kazukiyoshida@mail.harvard.edu>
Diff between tableone versions 0.7.0 dated 2015-08-10 and 0.7.1 dated 2015-08-12
DESCRIPTION | 8 - MD5 | 16 +- NEWS | 11 + R/modules-smd.R | 4 build/vignette.rds |binary inst/doc/smd.Rmd | 2 inst/doc/smd.html | 268 +++++++++++++++++++------------------- tests/testthat/test-modules-smd.R | 32 +++- vignettes/smd.Rmd | 2 9 files changed, 185 insertions(+), 158 deletions(-)
Title: Online Principal Component Analysis
Description: Online PCA for multivariate and functional data using perturbation, incremental, and stochastic gradient methods.
Author: David Degras [aut, cre], Herve Cardot [ctb]
Maintainer: David Degras <ddegrasv@depaul.edu>
Diff between onlinePCA versions 1.0-1 dated 2015-01-21 and 1.2 dated 2015-08-12
onlinePCA-1.0-1/onlinePCA/src/sgapca.cpp |only onlinePCA-1.2/onlinePCA/DESCRIPTION | 14 ++-- onlinePCA-1.2/onlinePCA/MD5 | 71 +++++++++++--------- onlinePCA-1.2/onlinePCA/NAMESPACE | 7 +- onlinePCA-1.2/onlinePCA/NEWS | 27 +++++++ onlinePCA-1.2/onlinePCA/R/RcppExports.R | 16 +++- onlinePCA-1.2/onlinePCA/R/batchpca.R | 12 +-- onlinePCA-1.2/onlinePCA/R/ccipca.R |only onlinePCA-1.2/onlinePCA/R/coef2fd.R | 9 +- onlinePCA-1.2/onlinePCA/R/create.basis.R | 48 +++++++------ onlinePCA-1.2/onlinePCA/R/fd2coef.R | 11 +-- onlinePCA-1.2/onlinePCA/R/ghapca.R |only onlinePCA-1.2/onlinePCA/R/impute.R |only onlinePCA-1.2/onlinePCA/R/incRpca.R | 70 +++++++++----------- onlinePCA-1.2/onlinePCA/R/incRpca.rc.R |only onlinePCA-1.2/onlinePCA/R/perturbationRpca.R | 64 +++++++----------- onlinePCA-1.2/onlinePCA/R/secularRpca.R | 77 +++++++++------------- onlinePCA-1.2/onlinePCA/R/sgapca.R | 61 +++++++++-------- onlinePCA-1.2/onlinePCA/R/snlpca.R | 75 +++++++++++---------- onlinePCA-1.2/onlinePCA/R/updateCovariance.R | 24 +++--- onlinePCA-1.2/onlinePCA/R/updateMean.R | 37 +++++----- onlinePCA-1.2/onlinePCA/man/batchpca.Rd | 24 +++--- onlinePCA-1.2/onlinePCA/man/ccipca.Rd |only onlinePCA-1.2/onlinePCA/man/coef2fd.Rd | 27 +++---- onlinePCA-1.2/onlinePCA/man/create.basis.Rd | 30 ++++---- onlinePCA-1.2/onlinePCA/man/fd2coef.Rd | 31 ++++----- onlinePCA-1.2/onlinePCA/man/ghapca.Rd |only onlinePCA-1.2/onlinePCA/man/impute.Rd |only onlinePCA-1.2/onlinePCA/man/incRpca.Rd | 51 +++++++------- onlinePCA-1.2/onlinePCA/man/incRpca.rc.Rd |only onlinePCA-1.2/onlinePCA/man/onlinePCA-package.Rd | 13 ++- onlinePCA-1.2/onlinePCA/man/perturbationRpca.Rd | 33 ++++----- onlinePCA-1.2/onlinePCA/man/secularRpca.Rd | 45 ++++++------- onlinePCA-1.2/onlinePCA/man/sgapca.Rd | 54 ++++++++------- onlinePCA-1.2/onlinePCA/man/snlpca.Rd | 67 ++++++++++--------- onlinePCA-1.2/onlinePCA/man/updateCovariance.Rd | 25 +++---- onlinePCA-1.2/onlinePCA/man/updateMean.Rd | 41 +++++------ onlinePCA-1.2/onlinePCA/src/Makevars | 30 ++++++++ onlinePCA-1.2/onlinePCA/src/Makevars.win | 4 - onlinePCA-1.2/onlinePCA/src/RcppExports.cpp | 79 ++++++++++++++--------- onlinePCA-1.2/onlinePCA/src/ccipca.cpp |only onlinePCA-1.2/onlinePCA/src/sga_ghapca.cpp |only 42 files changed, 627 insertions(+), 550 deletions(-)
Title: Single-Sample Classifier of Medulloblastoma Subtypes for
Medulloblastoma Patient Samples, Mouse Models, and Cell Lines
Description: Description: A single-sample classifier that generates Medulloblastoma (MB) subtype predictions for single-samples of human MB patients and model systems, including cell lines and mouse-models. The MM2S algorithm uses a systems-based methodology that facilitates application of the algorithm on samples irrespective of their platform or source of origin. MM2S demonstrates > 96% accuracy for patients of well-characterized normal cerebellum, Wingless (WNT), or Sonic hedgehog (SHH) subtypes, and the less-characterized Group4 (86%) and Group3 (78.2%). MM2S also enables classification of MB cell lines and mouse models into their human counterparts.This package contains function for implementing the classifier onto human data and mouse data, as well as graphical rendering of the results as PCA plots and heatmaps.
Author: Deena M.A. Gendoo <deena.gendoo@utoronto.ca>, Benjamin Haibe-Kains <benjamin.haibe.kains@utoronto.ca>
Maintainer: Deena M.A. Gendoo <deena.gendoo@utoronto.ca>
Diff between MM2S versions 1.0.2 dated 2015-07-08 and 1.0.3 dated 2015-08-12
DESCRIPTION | 11 ++++++----- MD5 | 14 +++++++++----- NEWS | 6 ++++++ README | 28 +++++++++++++++++++++++++++- build |only inst/doc/MM2S.R |only inst/doc/MM2S.Rnw |only inst/doc/MM2S.pdf |binary inst/doc/MM2S_Vignette_FrozenCapture.pdf |only vignettes/MM2S.Rnw | 5 +++-- 10 files changed, 51 insertions(+), 13 deletions(-)
Title: Use LaTeX Expressions in Plots
Description: Parses and converts LaTeX math formulas to R's plotmath expressions, used to enter mathematical formulas and symbols to be rendered as text, axis labels, etc. throughout R's plotting system.
Author: Stefano Meschiari [aut, cre]
Maintainer: Stefano Meschiari <stefano.meschiari@gmail.com>
Diff between latex2exp versions 0.3.2 dated 2015-07-28 and 0.3.3 dated 2015-08-12
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/latex2exp.R | 7 +++---- vignettes/latex2exp.Rmd | 6 ++++++ 4 files changed, 16 insertions(+), 11 deletions(-)