Wed, 23 Sep 2015

Package wikipediatrend updated to version 1.1.7 with previous version 1.1.6 dated 2015-07-21

Title: Public Subject Attention via Wikipedia Page Access Statistics
Description: Public attention is an interesting field of study. The internet not only allows to access information in no time on virtually any subject but via page access statistics gathered by website authors the subject of attention as well can be studied. For the omnipresent Wikipedia those access statistics are made available via 'http://stats.grok.se' a server providing the information as file dumps as well as as web API. This package provides an easy to use, consistent and traffic minimizing approach to make those data accessible within R.
Author: Peter Meissner [aut, cre], R Core team [ctb] ('wp_date()' derived from base package's 'as.Date()')
Maintainer: Peter Meissner <retep.meissner@gmail.com>

Diff between wikipediatrend versions 1.1.6 dated 2015-07-21 and 1.1.7 dated 2015-09-23

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Package scmamp updated to version 0.2.1 with previous version 0.2 dated 2015-09-06

Title: Statistical Comparison of Multiple Algorithms in Multiple Problems
Description: Given a matrix with results of different algorithms for different problems, the package uses statistical tests and corrections to assess the differences between algorithms.
Author: Borja Calvo [aut, cre], Guzman Santafe [aut]
Maintainer: Borja Calvo <borja.calvo@ehu.eus>

Diff between scmamp versions 0.2 dated 2015-09-06 and 0.2.1 dated 2015-09-23

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New package NostalgiR with initial version 1.0.2
Package: NostalgiR
Type: Package
Title: Advanced Text-Based Plots
Version: 1.0.2
Date: 2015-09-22
Author: Hien D. Nguyen
Maintainer: Hien D. Nguyen <h.nguyen7@uq.edu.au>
Description: Provides functions to produce advanced ascii graphics, directly to the terminal window. This package utilizes the txtplot() function from the 'txtplot' package, to produce text-based histograms, empirical cumulative distribution function plots, scatterplots with fitted and regression lines, quantile plots, density plots, image plots, and contour plots.
License: LGPL-3
Depends: txtplot
NeedsCompilation: no
Packaged: 2015-09-23 13:35:46 UTC; hiennguyen
Repository: CRAN
Date/Publication: 2015-09-24 01:24:01

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New package funr with initial version 0.1.1
Package: funr
Title: Simple Utility Providing Terminal Access to all R Functions
Description: A small utility which wraps Rscript and provides access to all R functions from the shell.
Version: 0.1.1
Authors@R: person("Sahil", "Seth", email = "me@sahilseth.com", role = c("aut", "cre"))
License: GPL
LazyData: true
Imports: utils
URL: https://github.com/sahilseth/funr
BugReports: https://github.com/sahilseth/funr/issues
NeedsCompilation: no
Packaged: 2015-09-23 06:59:59 UTC; sahilseth
Author: Sahil Seth [aut, cre]
Maintainer: Sahil Seth <me@sahilseth.com>
Repository: CRAN
Date/Publication: 2015-09-24 01:14:44

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New package drLumi with initial version 0.1.2
Package: drLumi
Type: Package
Title: Multiplex Immunoassays Data Analysis
Description: Contains quality control routines for multiplex immunoassay data, including several approaches for: treating the background noise of the assay, fitting the dose-response curves and estimating the limits of quantification.
Version: 0.1.2
Depends: R (>= 3.2.2)
Imports: reshape, Hmisc, chron, gdata, plyr, stringr, ggplot2, minpack.lm, stats, irr, rootSolve, msm
Date: 2015-09-20
VignetteBuilder: knitr
Suggests: knitr, testthat, xtable
Authors@R: c(person("Hector", "Sanz", role = c("aut", "cre"), email = "hector.sanz@isglobal.org"), person("John", "Aponte", role = "aut"), person("Jaroslaw", "Harezlak", role = "aut"), person("Yan", "Dong", role = "aut"), person("Magdalena", "Murawska", role = "aut"), person("Clarissa", "Valim", role = "aut"), person("Aintzane", "Ayestaran", role = "ctb"), person("Ruth", "Aguilar", role = "ctb"), person("Gemma", "Moncunill", role = "ctb"))
License: GPL (>= 2)
NeedsCompilation: no
Packaged: 2015-09-23 10:30:09 UTC; hsanz
Author: Hector Sanz [aut, cre], John Aponte [aut], Jaroslaw Harezlak [aut], Yan Dong [aut], Magdalena Murawska [aut], Clarissa Valim [aut], Aintzane Ayestaran [ctb], Ruth Aguilar [ctb], Gemma Moncunill [ctb]
Maintainer: Hector Sanz <hector.sanz@isglobal.org>
Repository: CRAN
Date/Publication: 2015-09-24 01:27:27

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Package BiodiversityR updated to version 2.5-4 with previous version 2.5-3 dated 2015-07-23

Title: Package for Community Ecology and Suitability Analysis
Description: Graphical User Interface (via the R-Commander) and utility functions (often based on the vegan package) for statistical analysis of biodiversity and ecological communities, including species accumulation curves, diversity indices, Renyi profiles, GLMs for analysis of species abundance and presence-absence, distance matrices, Mantel tests, and cluster, constrained and unconstrained ordination analysis. A book on biodiversity and community ecology analysis is available for free download from the website. In 2012, methods for (ensemble) suitability modelling and mapping were expanded in the package.
Author: Roeland Kindt
Maintainer: Roeland Kindt <R.KINDT@CGIAR.ORG>

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Package bcrm updated to version 0.4.5 with previous version 0.4.4 dated 2014-04-08

Title: Bayesian Continual Reassessment Method for Phase I Dose-Escalation Trials
Description: Implements a wide variety of one and two-parameter Bayesian CRM designs. The program can run interactively, allowing the user to enter outcomes after each cohort has been recruited, or via simulation to assess operating characteristics.
Author: Michael Sweeting
Maintainer: Michael Sweeting <mjs212@medschl.cam.ac.uk>

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Package tigerstats updated to version 0.2.7 with previous version 0.2-6 dated 2015-05-23

Title: R Functions for Elementary Statistics
Description: A collection of data sets and functions that are useful in the teaching of statistics at an elementary level to students who may have little or no previous experience with the command line. The functions for elementary inferential procedures follow a uniform interface for user input. Some of the functions are instructional applets that can only be run on the R Studio integrated development environment with package 'manipulate' installed. Other instructional applets are Shiny apps that may be run locally. In teaching the package is used alongside of package 'mosaic', 'mosaicData' and 'abd', which are therefore listed as dependencies.
Author: Rebekah Robinson <rrobinson20@humana.com> and Homer White <hwhite0@georgetowncollege.edu>
Maintainer: Homer White <hwhite0@georgetowncollege.edu>

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Package sgd updated to version 1.0 with previous version 0.1 dated 2015-05-08

Title: Stochastic Gradient Descent for Scalable Estimation
Description: A fast and flexible set of tools for large scale estimation. It features many stochastic gradient methods, built-in models, visualization tools, automated hyperparameter tuning, model checking, interval estimation, and convergence diagnostics.
Author: Dustin Tran [aut, cre], Panos Toulis [aut], Tian Lian [ctb], Ye Kuang [ctb], Edoardo Airoldi [ctb]
Maintainer: Dustin Tran <dtran@g.harvard.edu>

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Package pbdZMQ updated to version 0.1-1 with previous version 0.1-0 dated 2015-09-11

Title: Programming with Big Data -- Interface to ZeroMQ
Description: Providing high level R wrapper functions to utilize ZeroMQ C API functions in detail manners. pbdZMQ mainly focuses on client/servers programming framework in an interaction style. A minimum ZeroMQ library 4.1.0 rc1 is built and linked within pbdZMQ if no external ZerMQ library is not provided. A few compatible wrapper functions to rzmq are also provided.
Author: Wei-Chen Chen [aut, cre], Drew Schmidt [aut], Whit Armstrong [ctb] (some functions are modified from the rzmq for backward compatibility), Brian Ripley [ctb] (C code of shellexec), R Core team [ctb] (some functions are modified from the R source code)
Maintainer: Wei-Chen Chen <wccsnow@gmail.com>

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Package nhanesA updated to version 0.6.0 with previous version 0.5 dated 2015-09-01

Title: NHANES Data Retrieval
Description: Utility to retrieve data from the National Health and Nutrition Examination Survey (NHANES).
Author: Christopher Endres
Maintainer: Christopher Endres <cjendres1@gmail.com>

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Package lqmm updated to version 1.5.2 with previous version 1.5.1 dated 2014-12-16

Title: Linear Quantile Mixed Models
Description: This is a collection of functions to fit quantile regression models for independent and hierarchical data.
Author: Marco Geraci
Maintainer: Marco Geraci <geraci@mailbox.sc.edu>

Diff between lqmm versions 1.5.1 dated 2014-12-16 and 1.5.2 dated 2015-09-23

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Package iC10 updated to version 1.1.3 with previous version 1.1.2 dated 2014-12-08

Title: A Copy Number and Expression-Based Classifier for Breast Tumours
Description: Implementation of the classifier described in the paper 'Genome-driven integrated classification of breast cancer validated in over 7,500 samples' (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group.
Author: Oscar M Rueda
Maintainer: Oscar M. Rueda <Oscar.Rueda@cruk.cam.ac.uk>

Diff between iC10 versions 1.1.2 dated 2014-12-08 and 1.1.3 dated 2015-09-23

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Package Evapotranspiration updated to version 1.7 with previous version 1.6 dated 2015-06-23

Title: Modelling Actual, Potential and Reference Crop Evapotranspiration
Description: Uses data and constants to calculate potential evapotranspiration (PET) and actual evapotranspiration (AET) from 21 different formulations including Penman, Penman-Monteith FAO 56, Priestley-Taylor and Morton formulations.
Author: Danlu Guo <danlu.guo@adelaide.edu.au>, Seth Westra <swestra@civeng.adelaide.edu.au>
Maintainer: Danlu Guo <danlu.guo@adelaide.edu.au>

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Package eeptools updated to version 0.9.0 with previous version 0.3.1 dated 2014-02-23

Title: Convenience Functions for Education Data
Description: Collection of convenience functions to make working with administrative records easier and more consistent. Includes functions to clean strings, identify cutpoints, and quickly combine shapefiles and dataframes for plotting. Includes four alternative themes for ggplot2. Also includes three example datasets of administrative education records for learning how to process records with errors.
Author: Jason P. Becker [ctb], Jared E. Knowles [aut, cre]
Maintainer: Jared E. Knowles <jknowles@gmail.com>

Diff between eeptools versions 0.3.1 dated 2014-02-23 and 0.9.0 dated 2015-09-23

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