Title: Tools for Semantic Vector Spaces
Description: Various tools for semantic vector spaces, such as
correspondence analysis (simple, multiple and discriminant), latent
semantic analysis, probabilistic latent semantic analysis, non-negative
matrix factorization and EM clustering. Furthermore, there are specialized
distance measures, plotting functions and some helper functions.
Author: Koen Plevoets [aut, cre]
Maintainer: Koen Plevoets <koen.plevoets@ugent.be>
Diff between svs versions 1.0.2 dated 2015-10-16 and 1.0.3 dated 2015-10-18
DESCRIPTION | 10 +++++----- MD5 | 22 +++++++++++----------- NAMESPACE | 1 + R/svs.r | 31 +++++++++++++++++-------------- inst/extdata/Ctxt_Dut.txt | 2 +- inst/extdata/Ctxt_Eng.txt | 2 +- inst/extdata/Ctxt_Fra.txt | 2 +- man/InvT_Eng.txt.Rd | 2 +- man/InvT_Fra.txt.Rd | 2 +- man/SndT_Eng.txt.Rd | 2 +- man/SndT_Fra.txt.Rd | 2 +- man/svs-package.Rd | 2 +- 12 files changed, 42 insertions(+), 38 deletions(-)
Title: Tools for Analyzing Crossover Interference
Description: Analysis of crossover interference in experimental crosses,
particularly regarding the gamma model.
Author: Karl W Broman <kbroman@biostat.wisc.edu>, with contributions
from Il-Youp Kwak
Maintainer: Karl W Broman <kbroman@biostat.wisc.edu>
Diff between xoi versions 0.61-1 dated 2013-01-14 and 0.66-9 dated 2015-10-18
xoi-0.61-1/xoi/README.txt |only xoi-0.61-1/xoi/inst/README.txt |only xoi-0.61-1/xoi/man/xoi-internal.Rd |only xoi-0.66-9/xoi/DESCRIPTION | 24 xoi-0.66-9/xoi/MD5 | 149 ++-- xoi-0.66-9/xoi/NAMESPACE | 45 - xoi-0.66-9/xoi/R/bssbsb-data.R |only xoi-0.66-9/xoi/R/chiasma.R | 154 ++-- xoi-0.66-9/xoi/R/coi_um.R |only xoi-0.66-9/xoi/R/coincidence.R | 171 ++-- xoi-0.66-9/xoi/R/fitGamma.R | 389 ++++++---- xoi-0.66-9/xoi/R/fitStahl.R | 462 +++++++------ xoi-0.66-9/xoi/R/gammaDensities.R | 1099 +++++++++++++++++++++++-------- xoi-0.66-9/xoi/R/kfunc.R | 140 +-- xoi-0.66-9/xoi/R/kwak_coincidence.R | 132 +-- xoi-0.66-9/xoi/R/kwak_get_n_xo.R | 25 xoi-0.66-9/xoi/R/kwak_identify_xo.R | 45 - xoi-0.66-9/xoi/R/kwak_intensity.R | 124 +-- xoi-0.66-9/xoi/R/recrate.R | 281 ++++--- xoi-0.66-9/xoi/R/simStahl.R | 219 ++++-- xoi-0.66-9/xoi/R/util.R | 437 +++++++----- xoi-0.66-9/xoi/R/xoiversion.R | 26 xoi-0.66-9/xoi/data/bssbsb.RData |binary xoi-0.66-9/xoi/inst/README.md |only xoi-0.66-9/xoi/inst/STATUS.txt | 38 - xoi-0.66-9/xoi/man/bssbsb.Rd | 60 - xoi-0.66-9/xoi/man/chiasma.Rd | 98 +- xoi-0.66-9/xoi/man/coincidence.Rd | 57 - xoi-0.66-9/xoi/man/convertxoloc.Rd | 45 - xoi-0.66-9/xoi/man/countxo.Rd | 46 - xoi-0.66-9/xoi/man/distance.given.two.Rd | 134 +-- xoi-0.66-9/xoi/man/est.coi.Rd | 88 +- xoi-0.66-9/xoi/man/est.coi.um.Rd |only xoi-0.66-9/xoi/man/est.recrate.Rd | 71 +- xoi-0.66-9/xoi/man/find.breaks.Rd | 78 +- xoi-0.66-9/xoi/man/first.given.two.Rd | 133 +-- xoi-0.66-9/xoi/man/firstden.Rd | 107 +-- xoi-0.66-9/xoi/man/fitGamma.Rd | 176 ++-- xoi-0.66-9/xoi/man/fitStahl.Rd | 116 +-- xoi-0.66-9/xoi/man/gammacoi.Rd | 93 +- xoi-0.66-9/xoi/man/intensity.Rd | 57 - xoi-0.66-9/xoi/man/ioden.Rd | 98 +- xoi-0.66-9/xoi/man/joint.given.two.Rd | 122 +-- xoi-0.66-9/xoi/man/kfunc.Rd |only xoi-0.66-9/xoi/man/location.given.one.Rd | 125 +-- xoi-0.66-9/xoi/man/recrate2scanone.Rd |only xoi-0.66-9/xoi/man/simStahl.Rd | 88 +- xoi-0.66-9/xoi/man/stahlLoglik.Rd | 94 +- xoi-0.66-9/xoi/man/stahlcoi.Rd | 104 +- xoi-0.66-9/xoi/man/xoiversion.Rd | 32 xoi-0.66-9/xoi/man/xoprob.Rd | 110 +-- xoi-0.66-9/xoi/src/GammaDensities.c | 298 ++++---- xoi-0.66-9/xoi/src/GammaIntegral.c | 88 +- xoi-0.66-9/xoi/src/GammaLoglik.c | 50 - xoi-0.66-9/xoi/src/GammaS.c | 331 ++++----- xoi-0.66-9/xoi/src/GammaS.h | 102 +- xoi-0.66-9/xoi/src/GammaUtil.c | 122 +-- xoi-0.66-9/xoi/src/chiasma.c | 348 ++++----- xoi-0.66-9/xoi/src/chiasma.h | 15 xoi-0.66-9/xoi/src/coi_um.c |only xoi-0.66-9/xoi/src/coi_um.h |only xoi-0.66-9/xoi/src/coincidence.c | 300 ++++---- xoi-0.66-9/xoi/src/coincidence.h | 22 xoi-0.66-9/xoi/src/fitStahl.c | 333 ++++----- xoi-0.66-9/xoi/src/fitStahl.h | 25 xoi-0.66-9/xoi/src/kfunc.c | 146 ++-- xoi-0.66-9/xoi/src/kfunc.h | 24 xoi-0.66-9/xoi/src/kwak.h | 46 - xoi-0.66-9/xoi/src/kwak_coincidence.c | 266 +++---- xoi-0.66-9/xoi/src/kwak_get_n_xo.c | 68 - xoi-0.66-9/xoi/src/kwak_identify.c | 96 +- xoi-0.66-9/xoi/src/kwak_intensity.c | 121 +-- xoi-0.66-9/xoi/src/recrate.c | 150 ++-- xoi-0.66-9/xoi/src/recrate.h | 14 xoi-0.66-9/xoi/src/simStahl.c | 329 ++++++--- xoi-0.66-9/xoi/src/simStahl.h |only xoi-0.66-9/xoi/src/stahl_util.c | 72 +- xoi-0.66-9/xoi/src/stahl_util.h | 18 xoi-0.66-9/xoi/src/zeroin.c | 184 ++--- xoi-0.66-9/xoi/src/zeroin.h | 30 xoi-0.66-9/xoi/tests |only 81 files changed, 5380 insertions(+), 4310 deletions(-)
Title: Weighted Likelihood Estimation
Description: Approach to the robustness via Weighted Likelihood.
Author: Claudio Agostinelli <claudio.agostinelli@unitn.it>, SLATEC Common Mathematical Library <www.netlib.org/slatec>
Maintainer: Claudio Agostinelli <claudio.agostinelli@unitn.it>
Diff between wle versions 0.9-9 dated 2013-12-11 and 0.9-91 dated 2015-10-18
wle-0.9-9/wle/R/mle.cv.robust.bootstrap.R |only wle-0.9-9/wle/R/wle.normal.high.R |only wle-0.9-9/wle/R/wle.normal.high.chisq.R |only wle-0.9-9/wle/R/wle.normal.high.r.R |only wle-0.9-9/wle/man/wle.lm.control.Rd |only wle-0.9-9/wle/src/wleaicls.f |only wle-0.9-91/wle/DESCRIPTION | 14 +-- wle-0.9-91/wle/MD5 | 100 ++++++++++++------------- wle-0.9-91/wle/NAMESPACE | 115 ++++++++++++++++++++++++++++ wle-0.9-91/wle/R/densitynormalmulti.R |only wle-0.9-91/wle/R/wle.control.R | 119 +++++++++++++++++++++++++++++- wle-0.9-91/wle/R/wle.weights2.R |only wle-0.9-91/wle/README | 4 - wle-0.9-91/wle/data/artificial.rda |binary wle-0.9-91/wle/data/cavendish.rda |binary wle-0.9-91/wle/data/hald.rda |binary wle-0.9-91/wle/data/rocky.rda |binary wle-0.9-91/wle/data/selection.rda |binary wle-0.9-91/wle/man/wle.aic.ar.Rd | 16 ++-- wle-0.9-91/wle/man/wle.fracdiff.Rd | 46 ++++++----- wle-0.9-91/wle/man/wle.glm.Rd | 2 wle-0.9-91/wle/man/wle.glm.weights.Rd | 8 +- wle-0.9-91/wle/man/wle.weights.Rd | 4 - wle-0.9-91/wle/src/dbetawrapper.c | 2 wle-0.9-91/wle/src/densitynormalmulti.f |only wle-0.9-91/wle/src/dqagie.f | 6 + wle-0.9-91/wle/src/dqagpe.f | 3 wle-0.9-91/wle/src/genprm.f | 4 - wle-0.9-91/wle/src/initds.f | 4 + wle-0.9-91/wle/src/mleaic.f | 5 - wle-0.9-91/wle/src/mlecp.f | 26 ------ wle-0.9-91/wle/src/mlecv.f | 2 wle-0.9-91/wle/src/mlestepwise.f | 3 wle-0.9-91/wle/src/weights.f | 2 wle-0.9-91/wle/src/weights2.f |only wle-0.9-91/wle/src/wleaic.f | 2 wle-0.9-91/wle/src/wlecp.f | 22 ----- wle-0.9-91/wle/src/wlecv.f | 2 wle-0.9-91/wle/src/wlecvone.f | 6 - wle-0.9-91/wle/src/wlecvonem.f | 5 - wle-0.9-91/wle/src/wlecvonemc.f | 5 - wle-0.9-91/wle/src/wlegamma.f | 12 +-- wle-0.9-91/wle/src/wleinvga.f | 2 wle-0.9-91/wle/src/wlenmix.f | 2 wle-0.9-91/wle/src/wlenorm.f | 8 +- wle-0.9-91/wle/src/wlenormalhigh.f | 8 +- wle-0.9-91/wle/src/wlenormalmulti.f | 8 +- wle-0.9-91/wle/src/wleonestepfix.f | 43 +--------- wle-0.9-91/wle/src/wleregfix.f | 6 - wle-0.9-91/wle/src/wlestepwise.f | 1 wle-0.9-91/wle/src/wwlecv.f | 2 wle-0.9-91/wle/src/xercnt.f | 6 + wle-0.9-91/wle/src/xerhlt.f | 1 wle-0.9-91/wle/src/xermsg.f | 2 wle-0.9-91/wle/src/xerprn.f | 4 - wle-0.9-91/wle/src/xersve.f | 14 +-- 56 files changed, 416 insertions(+), 230 deletions(-)
Title: A Modern and Easy-to-Use Crypto Library
Description: Bindings to libsodium: a modern, easy-to-use software library for
encryption, decryption, signatures, password hashing and more. Sodium uses
curve25519, a state-of-the-art Diffie-Hellman function by Daniel Bernstein,
which has become very popular after it was discovered that the NSA had
backdoored Dual EC DRBG.
Author: Jeroen Ooms
Maintainer: Jeroen Ooms <jeroen.ooms@stat.ucla.edu>
Diff between sodium versions 0.1 dated 2015-10-11 and 0.2 dated 2015-10-18
DESCRIPTION | 8 +++++--- MD5 | 12 +++++++++++- NEWS |only build |only inst |only vignettes |only 6 files changed, 16 insertions(+), 4 deletions(-)
Title: Functions for Calculating Daily Solar Radiation and
Evapotranspiration
Description: Calculating daily global solar radiation at horizontal surface using several well-known models (i.e. Angstrom-Prescott, Supit-Van Kappel, Hargreaves, Bristow and Campbell, and Mahmood-Hubbard), and model calibration based on ground-truth data, and (3) model auto-calibration. The FAO Penmann-Monteith equation to calculate evapotranspiration is also included.
Author: Jedrzej S. Bojanowski
Maintainer: Jedrzej S. Bojanowski <jedrzej.bojanowski@gmail.com>
Diff between sirad versions 2.0-7 dated 2013-01-23 and 2.3-0 dated 2015-10-18
sirad-2.0-7/sirad/data/CFC.rda |only sirad-2.0-7/sirad/data/CSTmap.rda |only sirad-2.0-7/sirad/man/CFC.Rd |only sirad-2.0-7/sirad/man/CSTmap.Rd |only sirad-2.3-0/sirad/DESCRIPTION | 23 ++---- sirad-2.3-0/sirad/MD5 | 105 +++++++++++++++---------------- sirad-2.3-0/sirad/NAMESPACE | 5 + sirad-2.3-0/sirad/R/ap.R | 20 +++-- sirad-2.3-0/sirad/R/apcal.R | 32 ++++----- sirad-2.3-0/sirad/R/bc.R | 10 +- sirad-2.3-0/sirad/R/bcauto.R | 35 +++++----- sirad-2.3-0/sirad/R/bccal.R | 14 ++-- sirad-2.3-0/sirad/R/corrEarthSunDist.R | 4 - sirad-2.3-0/sirad/R/cst.R | 38 +++++------ sirad-2.3-0/sirad/R/cstRead.r | 7 -- sirad-2.3-0/sirad/R/dayLength.R | 12 +-- sirad-2.3-0/sirad/R/dayOfYear.R | 8 +- sirad-2.3-0/sirad/R/daylightTimeFactor.R | 8 +- sirad-2.3-0/sirad/R/degrees.R | 8 +- sirad-2.3-0/sirad/R/deltaVP.r | 4 - sirad-2.3-0/sirad/R/es.r | 4 - sirad-2.3-0/sirad/R/et0.r | 18 ++--- sirad-2.3-0/sirad/R/exd.R | 14 ++-- sirad-2.3-0/sirad/R/exh.R | 16 ++-- sirad-2.3-0/sirad/R/extrat.R | 18 ++--- sirad-2.3-0/sirad/R/ha.R | 20 +++-- sirad-2.3-0/sirad/R/hacal.R | 18 ++--- sirad-2.3-0/sirad/R/hauto.r | 23 +++--- sirad-2.3-0/sirad/R/hourAngle.R | 4 - sirad-2.3-0/sirad/R/mh.R | 22 +++--- sirad-2.3-0/sirad/R/modeval.r | 38 +++++------ sirad-2.3-0/sirad/R/opticalAirMass.R | 8 +- sirad-2.3-0/sirad/R/psychC.r | 4 - sirad-2.3-0/sirad/R/radians.R | 8 +- sirad-2.3-0/sirad/R/rnl.r | 4 - sirad-2.3-0/sirad/R/rns.r | 4 - sirad-2.3-0/sirad/R/solarDecl.R | 4 - sirad-2.3-0/sirad/R/solarZenithAngle.R | 4 - sirad-2.3-0/sirad/R/su.R | 22 ++++-- sirad-2.3-0/sirad/R/sucal.R | 26 +++---- sirad-2.3-0/sirad/R/sunElevationAngle.R | 8 +- sirad-2.3-0/sirad/R/sysdata.rda |only sirad-2.3-0/sirad/R/timeOfSunrise.R | 4 - sirad-2.3-0/sirad/R/timeOfSunset.R | 4 - sirad-2.3-0/sirad/R/ts.CMSAF.R | 64 ++++++++++++------ sirad-2.3-0/sirad/R/wind2.r | 8 +- sirad-2.3-0/sirad/man/ap.Rd | 24 ++++--- sirad-2.3-0/sirad/man/bcauto.Rd | 11 ++- sirad-2.3-0/sirad/man/bccal.Rd | 7 +- sirad-2.3-0/sirad/man/et0.Rd | 11 +-- sirad-2.3-0/sirad/man/ha.Rd | 16 +++- sirad-2.3-0/sirad/man/hauto.Rd | 6 + sirad-2.3-0/sirad/man/modeval.Rd | 8 +- sirad-2.3-0/sirad/man/sirad-package.Rd | 10 +- sirad-2.3-0/sirad/man/su.Rd | 19 +++-- sirad-2.3-0/sirad/man/ts.CMSAF.Rd | 6 - 56 files changed, 443 insertions(+), 375 deletions(-)
Title: Fits the FastRCS Robust Multivariable Linear Regression Model
Description: The FastRCS algorithm of Vakili and Schmitt (2014) for robust fit of the multivariable linear regression model and outliers detection.
Author: Kaveh Vakili [aut, cre]
Maintainer: Kaveh Vakili <vakili.kaveh.email@gmail.com>
Diff between FastRCS versions 0.0.6 dated 2015-01-09 and 0.0.7 dated 2015-10-18
DESCRIPTION | 10 +++++----- MD5 | 18 +++++++++--------- NAMESPACE | 3 +++ R/FastRCS.R | 8 ++++++-- man/FRCSnumStarts.Rd | 2 +- man/FastRCS-package.Rd | 1 + man/FastRCS.Rd | 8 +++++--- man/plot.FastRCS.Rd | 2 +- man/quanf.Rd | 2 +- src/FastRCS.cpp | 10 +++++----- 10 files changed, 37 insertions(+), 27 deletions(-)
Title: Average and Conditional Effects
Description: Use structural equation modeling to estimate average and conditional effects of a treatment variable
on an outcome variable, taking into account multiple continuous and categorical covariates.
Author: Axel Mayer [aut, cre],
Lisa Dietzfelbinger [ctb]
Maintainer: Axel Mayer <amayer2010@gmail.com>
Diff between EffectLiteR versions 0.3-3 dated 2015-04-30 and 0.4-1 dated 2015-10-18
DESCRIPTION | 12 - MD5 | 13 - NAMESPACE | 13 + R/effectliter.R | 417 ++++++++++++++++++++++++++++++++++++++----------- inst/elrshiny/server.R | 271 ++++++++++++++++++++++++------- inst/elrshiny/ui.R | 46 ++++- man/effectLite.Rd | 4 man/elrReadData.Rd |only 8 files changed, 606 insertions(+), 170 deletions(-)
Title: Embedded JavaScript Engine
Description: An R interface to Google's open source JavaScript engine.
V8 is written in C++ and implements ECMAScript as specified in ECMA-262,
5th edition. In addition, this package implements typed arrays as
specified in ECMA 6 used for high-performance computing and libraries
compiled with 'emscripten'.
Author: Jeroen Ooms
Maintainer: Jeroen Ooms <jeroen.ooms@stat.ucla.edu>
Diff between V8 versions 0.8 dated 2015-09-05 and 0.9 dated 2015-10-18
V8-0.8/V8/man/new_context.Rd |only V8-0.9/V8/DESCRIPTION | 6 +-- V8-0.9/V8/MD5 | 17 +++++----- V8-0.9/V8/NAMESPACE | 1 V8-0.9/V8/NEWS | 9 +++++ V8-0.9/V8/R/V8.R | 72 ++++++++++++++++++++++++++++--------------- V8-0.9/V8/configure | 8 ++-- V8-0.9/V8/man/V8.Rd |only V8-0.9/V8/src/Makevars.win | 10 ++--- V8-0.9/V8/src/tests |only V8-0.9/V8/tools/winlibs.R | 25 +++++++------- 11 files changed, 89 insertions(+), 59 deletions(-)
Title: Classes and Methods for Spatial Data
Description: Classes and methods for spatial
data; the classes document where the spatial location information
resides, for 2D or 3D data. Utility functions are provided, e.g. for
plotting data as maps, spatial selection, as well as methods for
retrieving coordinates, for subsetting, print, summary, etc.
Author: Edzer Pebesma [aut, cre],
Roger Bivand [aut],
Barry Rowlingson [ctb],
Virgilio Gomez-Rubio [ctb],
Robert Hijmans [ctb],
Michael Sumner [ctb],
Don MacQueen [ctb],
Jim Lemon [ctb],
Josh O'Brien [ctb]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between sp versions 1.2-0 dated 2015-09-08 and 1.2-1 dated 2015-10-18
sp-1.2-0/sp/tests/mp.R |only sp-1.2-0/sp/tests/over.R |only sp-1.2-1/sp/ChangeLog | 91 ++++++ sp-1.2-1/sp/DESCRIPTION | 10 sp-1.2-1/sp/MD5 | 64 ++-- sp-1.2-1/sp/R/CRS-methods.R | 8 sp-1.2-1/sp/R/SpatialLines-methods.R | 16 - sp-1.2-1/sp/R/SpatialLinesDataFrame-methods.R | 4 sp-1.2-1/sp/R/SpatialMultiPoints-methods.R | 9 sp-1.2-1/sp/R/SpatialMultiPointsDataFrame-methods.R | 2 sp-1.2-1/sp/R/merge.R | 65 ++-- sp-1.2-1/sp/R/over.R | 4 sp-1.2-1/sp/R/spsample.R | 4 sp-1.2-1/sp/demo/depend.R | 45 --- sp-1.2-1/sp/demo/mp.R | 2 sp-1.2-1/sp/inst/ChangeLog | 91 ++++++ sp-1.2-1/sp/inst/NEWS.Rd | 19 + sp-1.2-1/sp/inst/doc/csdacm.pdf |binary sp-1.2-1/sp/inst/doc/intro_sp.R | 52 +-- sp-1.2-1/sp/inst/doc/intro_sp.Rnw | 276 ++++++++++---------- sp-1.2-1/sp/inst/doc/intro_sp.pdf |binary sp-1.2-1/sp/inst/doc/over.R | 54 +++ sp-1.2-1/sp/inst/doc/over.Rnw | 67 ++++ sp-1.2-1/sp/inst/doc/over.pdf |binary sp-1.2-1/sp/inst/include/sp.h | 2 sp-1.2-1/sp/man/CRS-class.Rd | 7 sp-1.2-1/sp/man/SpatialLines-class.Rd | 2 sp-1.2-1/sp/man/SpatialLinesDataFrame-class.Rd | 1 sp-1.2-1/sp/man/aggregate.Rd | 5 sp-1.2-1/sp/src/sp.h | 2 sp-1.2-1/sp/tests/agg.R |only sp-1.2-1/sp/tests/agg.Rout.save |only sp-1.2-1/sp/tests/pass1.Rout.save | 33 +- sp-1.2-1/sp/vignettes/intro_sp.Rnw | 276 ++++++++++---------- sp-1.2-1/sp/vignettes/over.Rnw | 67 ++++ 35 files changed, 837 insertions(+), 441 deletions(-)
Title: Basic Wireless Communications Simulation
Description: A communications simulation package supporting common wireless modulation
formats including BPSK, QPSK, 8-PSK, 16-PSK, 16-QAM and 64-QAM. The package includes AWGN
noise generation, and raised cosine and square root raised cosine pulse shaping. It also
includes convenience functions for plotting constellation diagrams, density plots, stem
plots and eye diagrams. Together these functions enable the evaluation of bit error and
symbol error rates, evaluation of pulse shaping and inter-symbol interference and support
visualization of the respective signals and noise in a variety of formats.
Author: Alberto Gutierrez [aut, cre]
Maintainer: Alberto Gutierrez <algutier1@gmail.com>
Diff between rwirelesscom versions 1.4.2 dated 2015-10-15 and 1.4.3 dated 2015-10-18
DESCRIPTION | 6 +++--- MD5 | 4 ++-- src/rwirelesscom.cpp | 26 +++++++++++++++++--------- 3 files changed, 22 insertions(+), 14 deletions(-)
Title: Access and Plot CanVec and CanVec+ Data for Rapid Basemap
Creation in Canada
Description: Provides an interface to the National Topographic System (NTS), which is
the way in which a number of freely available Canadian datasets
are organized. CanVec and CanVec+ datasets, which include all data used
to create Canadian topographic maps, are two such datasets that are useful
in creating vector-based maps for locations across Canada. This packages searches
CanVec data by location, plots it using pretty defaults, and exports it to
human-readable shapefiles for use in another GIS.
Author: Dewey Dunnington <dewey@fishandwhistle.net>
Maintainer: Dewey Dunnington <dewey@fishandwhistle.net>
Diff between rcanvec versions 0.1.2 dated 2015-10-06 and 0.1.3 dated 2015-10-18
rcanvec-0.1.2/rcanvec/R/bboxtools.R |only rcanvec-0.1.2/rcanvec/R/geocode.R |only rcanvec-0.1.2/rcanvec/man/makebbox.Rd |only rcanvec-0.1.2/rcanvec/man/searchbbox.Rd |only rcanvec-0.1.2/rcanvec/man/zoom.Rd |only rcanvec-0.1.3/rcanvec/DESCRIPTION | 14 +- rcanvec-0.1.3/rcanvec/MD5 | 31 ++---- rcanvec-0.1.3/rcanvec/NAMESPACE | 3 rcanvec-0.1.3/rcanvec/R/canvec.R | 115 ++++++++++++++++++------ rcanvec-0.1.3/rcanvec/R/canvec.qplot.R | 65 +++++++++++-- rcanvec-0.1.3/rcanvec/R/nts.R | 4 rcanvec-0.1.3/rcanvec/data/canvec_layers.rda |binary rcanvec-0.1.3/rcanvec/man/canvec.export.Rd | 25 +++-- rcanvec-0.1.3/rcanvec/man/canvec.plot.Rd | 4 rcanvec-0.1.3/rcanvec/man/canvec.qplot.Rd | 36 +++++-- rcanvec-0.1.3/rcanvec/man/nts.Rd | 2 rcanvec-0.1.3/rcanvec/man/ntsstring.Rd | 2 rcanvec-0.1.3/rcanvec/man/rcanvec-package.Rd | 34 ++----- rcanvec-0.1.3/rcanvec/tests/testthat/test_nts.R | 6 - 19 files changed, 232 insertions(+), 109 deletions(-)
Title: Exploratory Data Analysis and Manipulation of Multi-Label Data
Sets
Description: Exploratory data analysis and manipulation functions for
multi-label data sets along with an interactive Shiny application to ease their
use.
Author: David Charte [cre],
Francisco Charte [aut]
Maintainer: David Charte <fdavidcl@outlook.com>
Diff between mldr versions 0.2.51 dated 2015-09-16 and 0.2.82 dated 2015-10-18
DESCRIPTION | 10 +++++----- MD5 | 33 ++++++++++++++++++++------------- NAMESPACE | 4 ++++ R/concurrence.R |only R/measures.R | 13 +++++++++++-- R/mldr.R | 5 ++--- R/read.arff.R | 4 ++-- data/birds.rda |binary data/emotions.rda |binary data/genbase.rda |binary demo/00Index | 1 + demo/decouple.R | 2 +- demo/rebuild_datasets.R |only inst/CITATION |only inst/doc/mldr.pdf |binary inst/shiny/rsconnect |only inst/shiny/server.R | 41 ++++++++++++++++++++++++++++++++--------- inst/shiny/ui.R | 15 ++++++++++----- man/concurrenceReport.Rd |only man/labelInteractions.Rd |only man/remedial.Rd |only 21 files changed, 88 insertions(+), 40 deletions(-)
Title: Hydrologic Indices for Daily Time Series Data
Description: Calculates a suite of hydrologic indices for daily time series data that are widely used in hydrology and stream ecology.
Author: Nick Bond
Maintainer: Nick Bond <n.bond@griffith.edu.au>
Diff between hydrostats versions 0.2.3 dated 2014-12-21 and 0.2.4 dated 2015-10-18
hydrostats-0.2.3/hydrostats/data/Acheron.txt |only hydrostats-0.2.3/hydrostats/data/Cooper.txt |only hydrostats-0.2.4/hydrostats/DESCRIPTION | 13 - hydrostats-0.2.4/hydrostats/MD5 | 30 +-- hydrostats-0.2.4/hydrostats/NAMESPACE | 3 hydrostats-0.2.4/hydrostats/NEWS | 11 + hydrostats-0.2.4/hydrostats/R/baseflows.R | 172 +++++++++--------- hydrostats-0.2.4/hydrostats/R/flood.length.max.R | 2 hydrostats-0.2.4/hydrostats/R/high.spell.lengths.R | 3 hydrostats-0.2.4/hydrostats/R/high.spells.R | 4 hydrostats-0.2.4/hydrostats/README.md | 2 hydrostats-0.2.4/hydrostats/data/Acheron.txt.gz |only hydrostats-0.2.4/hydrostats/data/Cooper.txt.gz |only hydrostats-0.2.4/hydrostats/man/baseflows.Rd | 7 hydrostats-0.2.4/hydrostats/man/daily.cv.Rd | 2 hydrostats-0.2.4/hydrostats/man/flood.length.max.Rd | 12 - hydrostats-0.2.4/hydrostats/man/high.spell.lengths.Rd | 2 hydrostats-0.2.4/hydrostats/man/hydrostats-package.Rd | 4 18 files changed, 152 insertions(+), 115 deletions(-)
Title: Spatial and Spatio-Temporal Geostatistical Modelling, Prediction
and Simulation
Description: Variogram modelling; simple, ordinary and universal point or block (co)kriging; spatio-temporal kriging; sequential Gaussian or indicator (co)simulation; variogram and variogram map plotting utility functions.
Author: Edzer Pebesma [aut, cre],
Benedikt Graeler [aut]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between gstat versions 1.0-26 dated 2015-08-26 and 1.1-0 dated 2015-10-18
gstat-1.0-26/gstat/LICENCE |only gstat-1.0-26/gstat/configure |only gstat-1.0-26/gstat/configure.in |only gstat-1.0-26/gstat/configure.win |only gstat-1.0-26/gstat/src/chfactor.c |only gstat-1.0-26/gstat/src/config.hin |only gstat-1.0-26/gstat/src/config.w32 |only gstat-1.0-26/gstat/src/copy.c |only gstat-1.0-26/gstat/src/err.c |only gstat-1.0-26/gstat/src/err.h |only gstat-1.0-26/gstat/src/ext_dbase.h |only gstat-1.0-26/gstat/src/hsehldr.c |only gstat-1.0-26/gstat/src/init.c |only gstat-1.0-26/gstat/src/ivecop.c |only gstat-1.0-26/gstat/src/lex.l |only gstat-1.0-26/gstat/src/lufactor.c |only gstat-1.0-26/gstat/src/machine.c |only gstat-1.0-26/gstat/src/machine.hin |only gstat-1.0-26/gstat/src/machine.w32 |only gstat-1.0-26/gstat/src/matop.c |only gstat-1.0-26/gstat/src/matrix.h |only gstat-1.0-26/gstat/src/matrix2.h |only gstat-1.0-26/gstat/src/meminfo.c |only gstat-1.0-26/gstat/src/meminfo.h |only gstat-1.0-26/gstat/src/memory.c |only gstat-1.0-26/gstat/src/meschach |only gstat-1.0-26/gstat/src/norm.c |only gstat-1.0-26/gstat/src/polygon.c |only gstat-1.0-26/gstat/src/polygon.h |only gstat-1.0-26/gstat/src/pxop.c |only gstat-1.0-26/gstat/src/qrfactor.c |only gstat-1.0-26/gstat/src/solve.c |only gstat-1.0-26/gstat/src/sparse.c |only gstat-1.0-26/gstat/src/sparse.h |only gstat-1.0-26/gstat/src/sparse2.h |only gstat-1.0-26/gstat/src/sprow.c |only gstat-1.0-26/gstat/src/submat.c |only gstat-1.0-26/gstat/src/vecop.c |only gstat-1.0-26/gstat/src/version.c |only gstat-1.0-26/gstat/src/zmatrix.h |only gstat-1.0-26/gstat/src/zmatrix2.h |only gstat-1.1-0/gstat/DESCRIPTION | 10 gstat-1.1-0/gstat/MD5 | 193 - gstat-1.1-0/gstat/R/gstat.cv.R | 8 gstat-1.1-0/gstat/R/krige0.R | 41 gstat-1.1-0/gstat/R/load.variogram.model.R | 18 gstat-1.1-0/gstat/R/predict.gstat.R | 19 gstat-1.1-0/gstat/R/stVariogramModels.R | 33 gstat-1.1-0/gstat/R/vgm.R | 2 gstat-1.1-0/gstat/R/zzz.R | 1 gstat-1.1-0/gstat/build/vignette.rds |binary gstat-1.1-0/gstat/cleanup | 3 gstat-1.1-0/gstat/data/coalash.rda |binary gstat-1.1-0/gstat/data/fulmar.rda |binary gstat-1.1-0/gstat/data/jura.rda |binary gstat-1.1-0/gstat/data/meuse.all.rda |binary gstat-1.1-0/gstat/data/meuse.alt.rda |binary gstat-1.1-0/gstat/data/ncp.grid.rda |binary gstat-1.1-0/gstat/data/oxford.rda |binary gstat-1.1-0/gstat/data/pcb.rda |binary gstat-1.1-0/gstat/data/sic2004.rda |binary gstat-1.1-0/gstat/data/sic97.rda |binary gstat-1.1-0/gstat/data/tull.rda |binary gstat-1.1-0/gstat/data/vv.rda |binary gstat-1.1-0/gstat/data/walker.rda |binary gstat-1.1-0/gstat/data/wind.rda |binary gstat-1.1-0/gstat/inst/ChangeLog | 276 + gstat-1.1-0/gstat/inst/NEWS.Rd |only gstat-1.1-0/gstat/inst/doc/gstat.pdf |binary gstat-1.1-0/gstat/inst/doc/prs.pdf |binary gstat-1.1-0/gstat/inst/doc/spatio-temporal-kriging.pdf |binary gstat-1.1-0/gstat/inst/doc/st.R | 6 gstat-1.1-0/gstat/inst/doc/st.Rnw | 6 gstat-1.1-0/gstat/inst/doc/st.pdf |binary gstat-1.1-0/gstat/man/fit.StVariogram.Rd | 11 gstat-1.1-0/gstat/man/krigeST.Rd | 12 gstat-1.1-0/gstat/man/predict.gstat.Rd | 4 gstat-1.1-0/gstat/man/sic2004.Rd | 4 gstat-1.1-0/gstat/man/sic97.Rd | 6 gstat-1.1-0/gstat/man/vgmST.Rd | 3 gstat-1.1-0/gstat/man/walker.Rd | 5 gstat-1.1-0/gstat/src/Makevars |only gstat-1.1-0/gstat/src/chol.c |only gstat-1.1-0/gstat/src/config.h |only gstat-1.1-0/gstat/src/data.c | 1353 -------- gstat-1.1-0/gstat/src/data.h | 5 gstat-1.1-0/gstat/src/defs.h | 59 gstat-1.1-0/gstat/src/fit.c | 198 - gstat-1.1-0/gstat/src/gcdist.c | 12 gstat-1.1-0/gstat/src/getest.c | 55 gstat-1.1-0/gstat/src/gls.c | 279 - gstat-1.1-0/gstat/src/glvars.c | 152 gstat-1.1-0/gstat/src/glvars.h | 14 gstat-1.1-0/gstat/src/lex.c | 247 - gstat-1.1-0/gstat/src/lm.c | 73 gstat-1.1-0/gstat/src/mapio.c | 2847 ----------------- gstat-1.1-0/gstat/src/msim.c | 414 -- gstat-1.1-0/gstat/src/mtrx.c |only gstat-1.1-0/gstat/src/mtrx.h |only gstat-1.1-0/gstat/src/nsearch.c | 2 gstat-1.1-0/gstat/src/parse.c | 107 gstat-1.1-0/gstat/src/predict.c | 539 --- gstat-1.1-0/gstat/src/random.c | 75 gstat-1.1-0/gstat/src/reml.c | 46 gstat-1.1-0/gstat/src/s.c | 94 gstat-1.1-0/gstat/src/select.c | 49 gstat-1.1-0/gstat/src/sem.c | 216 - gstat-1.1-0/gstat/src/sem.h | 2 gstat-1.1-0/gstat/src/sim.c | 17 gstat-1.1-0/gstat/src/stat.c | 51 gstat-1.1-0/gstat/src/userio.c | 107 gstat-1.1-0/gstat/src/utils.c | 136 gstat-1.1-0/gstat/src/vario.c | 73 gstat-1.1-0/gstat/src/vario.h | 2 gstat-1.1-0/gstat/src/vario_fn.c | 6 gstat-1.1-0/gstat/tests/fit.Rout.save | 18 gstat-1.1-0/gstat/tests/merge.Rout.save | 44 gstat-1.1-0/gstat/tests/unproj.Rout.save | 68 gstat-1.1-0/gstat/tests/windst.Rout.save | 16 gstat-1.1-0/gstat/vignettes/st.Rnw | 6 120 files changed, 817 insertions(+), 7226 deletions(-)
Title: A Multi-Platform GUI for Drawing Customizable Graphs in R
Diff between GrapheR versions 1.9-84 dated 2014-07-27 and 1.9-85 dated 2015-10-18
Description: A multi-platform user interface for drawing highly customizable graphs in R. It aims to be a valuable help to quickly draw publishable graphs without any knowledge of R commands. Six kinds of graph are available: histogram, box-and-whisker plot, bar plot, pie chart, curve and scatter plot.
Author: Maxime Hervé
Maintainer: Maxime Hervé
GrapheR-1.9-84/GrapheR/man/Env.Rd |only
GrapheR-1.9-84/GrapheR/man/active.erreur.Rd |only
GrapheR-1.9-85/GrapheR/DESCRIPTION | 12 -
GrapheR-1.9-85/GrapheR/MD5 | 16 +-
GrapheR-1.9-85/GrapheR/NAMESPACE | 11 +
GrapheR-1.9-85/GrapheR/NEWS | 29 ----
GrapheR-1.9-85/GrapheR/R/Sources.R | 179 +++++++-------------------
GrapheR-1.9-85/GrapheR/R/zzzz.R | 2
GrapheR-1.9-85/GrapheR/build/vignette.rds |binary
GrapheR-1.9-85/GrapheR/man/GrapheR-package.Rd | 8 -
10 files changed, 86 insertions(+), 171 deletions(-)
Title: Comparing Correlations
Description: Statistical tests for the comparison between two
correlations based on either independent or dependent groups.
Dependent correlations can either be overlapping or
nonoverlapping. A web interface is available at
http://comparingcorrelations.org. A plugin for the R GUI and
IDE RKWard is included. Please install RKWard from
https://rkward.kde.org to use this feature. The respective R
package 'rkward' cannot be installed directly from a
repository, as it is a part of RKWard.
Author: Birk Diedenhofen [aut, cre]
Maintainer: Birk Diedenhofen <mail@birkdiedenhofen.de>
Diff between cocor versions 1.1-1 dated 2015-04-10 and 1.1-2 dated 2015-10-18
ChangeLog | 6 ++++ DESCRIPTION | 27 ++++++++++++--------- MD5 | 35 ++++++++++++++-------------- NAMESPACE | 3 +- R/0helper.r | 4 +-- R/cocor-package.R | 8 +++--- R/cocor.dep.groups.nonoverlap.r | 8 +++--- inst/CITATION | 7 +++-- inst/doc |only inst/rkward/rkwarddev.cocor.plugin.script.R | 4 +-- inst/tests/test.r | 5 ++++ man/as.htest.Rd | 3 +- man/cocor-package.Rd | 12 +++++---- man/cocor.Rd | 3 +- man/cocor.dep.groups.nonoverlap.Rd | 11 ++++---- man/cocor.dep.groups.overlap.Rd | 3 +- man/cocor.indep.groups.Rd | 3 +- man/get.cocor.input.Rd | 3 +- man/get.cocor.results.Rd | 3 +- 19 files changed, 88 insertions(+), 60 deletions(-)
Title: Robust Linear Regression with Compositional Data as Covariates
Description: Provides functionality to perform robust regression
on compositional data. To get information on the distribution of the
estimates, various bootstrapping methods are implemented for the
compositional as well as for standard robust regression models, to provide
a direct comparison between them.
Author: David Kepplinger <david.kepplinger@gmail.com>
Maintainer: David Kepplinger <david.kepplinger@gmail.com>
Diff between complmrob versions 0.5.8 dated 2014-12-09 and 0.6.1 dated 2015-10-18
ChangeLog | 5 ++++ DESCRIPTION | 8 +++--- MD5 | 34 ++++++++++++++--------------- NAMESPACE | 21 +++++++++++++++++- R/complmrob.R | 4 +++ R/plot-methods.R | 46 ++++++++++++++++++++++++++++------------ man/bootStat-methods.Rd | 17 +++++++------- man/bootcoefs.Rd | 3 +- man/complmrob.Rd | 3 +- man/confint.Rd | 3 +- man/format.perc.Rd | 3 +- man/isomLR.Rd | 5 ++-- man/plot.bootcoefs.Rd | 3 +- man/plot.complmrob.Rd | 3 +- man/predictdf.complmrob.part.Rd | 13 ++++++----- man/print-methods.Rd | 7 +++--- man/print.summary.complmrob.Rd | 3 +- man/summary-methods.Rd | 7 +++--- 18 files changed, 124 insertions(+), 64 deletions(-)
Title: Circle Manhattan Plot
Description: Manhattan plot, a type of scatter plot, was widely used to display the association results. However, it is usually time-consuming and laborious for a
non-specialist user to write scripts and adjust parameters of an elaborate plot. Moreover, the ever-growing traits measured have necessitated the
integration of results from different Genome-wide association study researches. Circle Manhattan Plot is the first open R package that can lay out
Genome-wide association study P-value results in both traditional rectangular patterns and novel circular ones. United in only one bull's eye style
plot, association results from multiple traits can be compared interactively, thereby to reveal both similarities and differences between signals.
Author: LiLin-Yin
Maintainer: LiLin-Yin <ylilin@163.com>
Diff between CMplot versions 3.0.1 dated 2015-08-28 and 3.0.3 dated 2015-10-18
DESCRIPTION | 8 +++--- MD5 | 8 +++--- NAMESPACE | 2 - R/CMplot.r | 65 ++++++++++++++++++++++++++++++++++++++++++-------- man/CMplot-package.Rd | 9 ++++-- 5 files changed, 70 insertions(+), 22 deletions(-)