Tue, 27 Oct 2015

New package piecewiseSEM with initial version 1.0.0
Package: piecewiseSEM
Type: Package
Title: Piecewise Structural Equation Modeling
Version: 1.0.0
Date: 2015-10-26
Author: Jon Lefcheck
Maintainer: Jon Lefcheck <jslefche@vims.edu>
Description: Implements piecewise structural equation models.
License: GPL-3
Imports: ggm, lavaan, lmerTest, nlme, lme4, methods
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2015-10-27 17:48:10 UTC; jslef
Repository: CRAN
Date/Publication: 2015-10-28 00:29:00

More information about piecewiseSEM at CRAN
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Package icenReg updated to version 1.2.8 with previous version 1.2.7 dated 2015-07-20

Title: Regression Models for Interval Censored Data
Description: Regression models for interval censored data. Currently supports Cox-PH and proportional odds models. Allows for both semi and fully parametric models. Includes functions for easy visual diagnostics of model fits. Includes functions for fitting both the univariate and bivariate NPMLE.
Author: Clifford Anderson-Bergman; the Eigen team for Eigen library included; uses Maarloes Maathius's HeightMap algorithm (MLEcens::reduc)
Maintainer: Clifford Anderson-Bergman <pistacliffcho@gmail.com>

Diff between icenReg versions 1.2.7 dated 2015-07-20 and 1.2.8 dated 2015-10-27

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 icenReg-1.2.8/icenReg/DESCRIPTION                             |   17 
 icenReg-1.2.8/icenReg/MD5                                     |   45 
 icenReg-1.2.8/icenReg/NAMESPACE                               |   10 
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 icenReg-1.2.8/icenReg/src/icenReg.cpp                         |    4 
 icenReg-1.2.8/icenReg/src/icenReg_files/basicUtilities.cpp    |  269 +++
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 icenReg-1.2.8/icenReg/src/icenReg_files/ic_par.cpp            |  174 ++
 icenReg-1.2.8/icenReg/src/icenReg_files/ic_par.h              |   52 
 icenReg-1.2.8/icenReg/src/icenReg_files/ic_sp_ch.cpp          |  702 +++-------
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 29 files changed, 1008 insertions(+), 700 deletions(-)

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Permanent link

New package gitlabr with initial version 0.5.1
Package: gitlabr
Title: Access to the Gitlab API
Version: 0.5.1
Authors@R: person("Jirka", "Lewandowski", email = "jirka.lewandowski@wzb.eu", role = c("aut", "cre"))
Description: Provides R functions to access the API of the project and repository management web application gitlab. For many common tasks (repository file access, issue assignment and status, commenting) convenience wrappers are provided, and in addition the full API can be used by specifying request locations. Gitlab is open-source software and can be self-hosted or used on gitlab.com.
Depends: R (>= 3.1.2), magrittr
Imports: dplyr (>= 0.4.3), stringr, base64enc, httr (>= 1.0.0), functional
Suggests: devtools (>= 1.8.0), roxygen2, testthat, R.rsp, knitr
URL: http://blog.points-of-interest.cc/post/gitlabr/ http://doc.gitlab.com/ce/api/
BugReports: http://gitlab.points-of-interest.cc/points-of-interest/gitlabr/issues/
VignetteBuilder: R.rsp
License: GPL (>= 3)
LazyData: true
NeedsCompilation: no
Packaged: 2015-10-27 19:28:26 UTC; jlewando
Author: Jirka Lewandowski [aut, cre]
Maintainer: Jirka Lewandowski <jirka.lewandowski@wzb.eu>
Repository: CRAN
Date/Publication: 2015-10-28 00:14:11

More information about gitlabr at CRAN
Permanent link

Package ClueR updated to version 1.1 with previous version 1.0 dated 2015-02-04

Title: CLUster Evaluation (CLUE)
Description: CLUE is an R package for identifying optimal number of clusters in a given time-course dataset clustered by cmeans or kmeans algorithms.
Author: Pengyi Yang & Raja Jothi
Maintainer: Pengyi Yang <yangpy7@gmail.com>

Diff between ClueR versions 1.0 dated 2015-02-04 and 1.1 dated 2015-10-27

 DESCRIPTION            |    8 +--
 MD5                    |   22 ++++-----
 NAMESPACE              |    7 ++-
 R/runClue.R            |   12 +++--
 README.md              |  113 ++++++++++++++++++++++++++++++++++++++++++++++++-
 man/ClueR-package.Rd   |    8 ++-
 man/clustEnrichment.Rd |    2 
 man/clustOptimal.Rd    |    2 
 man/enrichmentTest.Rd  |    2 
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 man/temporalSimu.Rd    |    2 
 12 files changed, 152 insertions(+), 34 deletions(-)

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Package BAS updated to version 1.0.6 with previous version 1.0.5 dated 2015-09-10

Title: Bayesian Model Averaging using Bayesian Adaptive Sampling
Description: Package for Bayesian Model Averaging in linear models and generalized linear models using stochastic or deterministic sampling without replacement from posterior distributions. Prior distributions on coefficients are from Zellner's g-prior or mixtures of g-priors corresponding to the Zellner-Siow Cauchy Priors or the Liang et al hyper-g priors (JASA 2008) or mixtures of g-priors in GLMS of Li and Clyde 2015. Other model selection criteria include AIC and BIC. Sampling probabilities may be updated based on the sampled models using Sampling w/out Replacement or an MCMC algorithm samples models using the BAS tree structure as an efficient hash table. Allows uniform or beta-binomial prior distributions on models, and may force variables to always be included.
Author: Merlise Clyde [aut, cre, cph], Michael Littman [ctb], Quanli Wang [ctb], Joyee Ghosh [ctb], Yingbo Li [ctb]
Maintainer: Merlise Clyde <clyde@stat.duke.edu>

Diff between BAS versions 1.0.5 dated 2015-09-10 and 1.0.6 dated 2015-10-27

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 BAS-1.0.6/BAS/src/glm_deterministic.c |   21 +--
 BAS-1.0.6/BAS/src/glm_lpy.c           |  224 ++++++++++++++++++----------------
 BAS-1.0.6/BAS/src/glm_mcmc.c          |   71 ++--------
 BAS-1.0.6/BAS/src/glm_mcmcbas.c       |   30 ++--
 BAS-1.0.6/BAS/src/glm_sampleworep.c   |   44 ++++--
 BAS-1.0.6/BAS/src/hypergeometric1F1.c |   69 ++++++----
 BAS-1.0.6/BAS/src/mcmc.c              |    4 
 BAS-1.0.6/BAS/src/mcmc_new.c          |    4 
 BAS-1.0.6/BAS/src/mcmcbas.c           |    4 
 BAS-1.0.6/BAS/src/posisearch.c        |    4 
 BAS-1.0.6/BAS/src/sampleworep.c       |    8 -
 BAS-1.0.6/BAS/src/sampleworep_new.c   |    8 -
 42 files changed, 490 insertions(+), 392 deletions(-)

More information about BAS at CRAN
Permanent link

Package umx updated to version 1.0.0 with previous version 0.50 dated 2015-08-27

Title: Helper Functions for Structural Equation Modelling in OpenMx
Description: Helper functions for making, running, and reporting SEM and twin models in OpenMx. If you are just starting, try typing ?umx.
Author: Timothy C Bates [aut, cre]
Maintainer: Timothy C Bates <timothy.c.bates@gmail.com>

Diff between umx versions 0.50 dated 2015-08-27 and 1.0.0 dated 2015-10-27

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More information about umx at CRAN
Permanent link

Package distcomp updated to version 0.25.4 with previous version 0.25.3 dated 2015-08-01

Title: Computations over Distributed Data without Aggregation
Description: Implementing algorithms and fitting models when sites (possibly remote) share computation summaries rather than actual data over HTTP with a master R process (using 'opencpu', for example). A stratified Cox model and a singular value decomposition are provided. The former makes direct use of code from the R 'survival' package. (That is, the underlying Cox model code is derived from that in the R 'survival' package.) Sites may provide data via several means: CSV files, Redcap API, etc. An extensible design allows for new methods to be added in the future. Web applications are provided (via 'shiny') for the implemented methods to help in designing and deploying the computations.
Author: Balasubramanian Narasimhan [aut, cre], Marina Bendersky [aut], Sam Gross [aut], Terry M. Therneau [ctb], Thomas Lumley [ctb]
Maintainer: Balasubramanian Narasimhan <naras@stat.Stanford.EDU>

Diff between distcomp versions 0.25.3 dated 2015-08-01 and 0.25.4 dated 2015-10-27

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Package cts updated to version 1.0-20 with previous version 1.0-19 dated 2014-02-26

Title: Continuous Time Autoregressive Models
Description: Functions to Fit Continuous Time Autoregressive Models with the Kalman Filter.
Author: Fortran original by G. Tunnicliffe-Wilson and Zhu Wang, R port by Zhu Wang with contribution from John Nash, Netlib and NAG authors
Maintainer: Zhu Wang <zwang@connecticutchildrens.org>

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Package bujar updated to version 0.1-5 with previous version 0.1-4 dated 2014-06-24

Title: Buckley-James Regression for Survival Data with High-Dimensional Covariates
Description: Buckley-James regression for right-censoring survival data with high-dimensional covariates. Including L_2 boosting with componentwise linear least squares, componentwise smoothing splines, P-splines, regression trees and boosted MARS. Other high-dimensional tools include elastic net and MARS.
Author: Zhu Wang and others (see COPYRIGHTS)
Maintainer: Zhu Wang <zwang@connecticutchildrens.org>

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Package aroma.cn updated to version 1.6.1 with previous version 1.6.0 dated 2015-02-24

Title: Copy-Number Analysis of Large Microarray Data Sets
Description: Methods for analyzing DNA copy-number data. Specifically, this package implements the multi-source copy-number normalization (MSCN) method for normalizing copy-number data obtained on various platforms and technologies. It also implements the TumorBoost method for normalizing paired tumor-normal SNP data.
Author: Henrik Bengtsson [aut, cre, cph], Pierre Neuvial [aut]
Maintainer: Henrik Bengtsson <henrikb@braju.com>

Diff between aroma.cn versions 1.6.0 dated 2015-02-24 and 1.6.1 dated 2015-10-27

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Package webutils updated to version 0.4 with previous version 0.3 dated 2015-01-24

Title: Utility Functions for Web Applications
Description: Utility functions for developing web applications. Includes parsers for application/x-www-form-urlencoded as well as multipart/form-data and examples of using the parser with either httpuv or rhttpd.
Author: Jeroen Ooms
Maintainer: Jeroen Ooms <jeroen.ooms@stat.ucla.edu>

Diff between webutils versions 0.3 dated 2015-01-24 and 0.4 dated 2015-10-27

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Package spduration updated to version 0.14.0 with previous version 0.13.1 dated 2015-07-09

Title: Split-Population Duration (Cure) Regression
Description: Functions for estimating split-duration regression models and various associated generic function methods.
Author: Andreas Beger [aut, cre], Daina Chiba [aut], Daniel Hill [aut], Nils Metternich [aut], Shahryar Minhas [aut], Michael Ward [cph]
Maintainer: Andreas Beger <adbeger@gmail.com>

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New package rpivotTable with initial version 0.1.5.7
Package: rpivotTable
Title: Build Powerful Pivot Tables and Dynamically Slice & Dice your Data
Date: 2015-10-27
Version: 0.1.5.7
Authors@R: c( person("Enzo", "Martoglio", role = c("aut", "cre"), comment = "R interface", email = "enzo@smartinsightsfromdata.com"), person("Nicolas", "kruchten", role = c("ctb", "cph"), comment = "pivottable library") )
Maintainer: Enzo Martoglio <enzo@smartinsightsfromdata.com>
Description: Build powerful pivot tables (aka Pivot Grid, Pivot Chart, Cross-Tab) and dynamically slice & dice / drag 'n' drop your data. 'rpivotTable' is a wrapper of 'pivottable', a powerful open-source Pivot Table library implemented in 'JavaScript' by Nicolas Kruchten. Aligned to 'pivottable' v1.6.3.
Depends: R (>= 3.1.0)
Imports: htmlwidgets (>= 0.4)
Suggests: testthat, knitr, rmarkdown, devtools, dplyr, data.table
Enhances: shiny (>= 0.12)
License: MIT + file LICENSE
URL: https://github.com/smartinsightsfromdata/, http://smartinsightsfromdata.github.io
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2015-10-27 09:33:05 UTC; e
Author: Enzo Martoglio [aut, cre] (R interface), Nicolas kruchten [ctb, cph] (pivottable library)
Repository: CRAN
Date/Publication: 2015-10-27 16:26:01

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Package RMySQL updated to version 0.10.7 with previous version 0.10.6 dated 2015-09-05

Title: Database Interface and 'MySQL' Driver for R
Description: Implements 'DBI' Interface to 'MySQL' and 'MariaDB' Databases.
Author: Jeroen Ooms [aut, cre], David James [aut], Saikat DebRoy [aut], Hadley Wickham [aut], Jeffrey Horner [aut], RStudio [cph]
Maintainer: Jeroen Ooms <jeroen.ooms@stat.ucla.edu>

Diff between RMySQL versions 0.10.6 dated 2015-09-05 and 0.10.7 dated 2015-10-27

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New package OrthoPanels with initial version 0.9-1
Package: OrthoPanels
Title: Dynamic Panel Models with Orthogonal Reparameterization of Fixed Effects
Version: 0.9-1
Authors@R: c(person("Davor", "Cubranic", role = c("aut", "cre"), email = "cubranic@stat.ubc.ca"), person("Mark", "Pickup", role = "aut", email = "mark.pickup@sfu.ca"), person("Paul", "Gustafson", role = "aut", email = "gustaf@stat.ubc.ca"), person("Geoffrey", "Evans", role = "aut", email = "geoffrey.evans@nuffield.ox.ac.uk"))
Description: Implements the orthogonal reparameterization approach recommended by Lancaster (2002) to estimate dynamic panel models with fixed effects (and optionally: panel specific intercepts). The approach uses a likelihood-based estimator and produces estimates that are asymptotically unbiased as N goes to infinity, with a T as low as 2.
Depends: R (>= 3.1.0)
Imports: MASS
Suggests: testthat, knitr
License: GPL (>= 3)
LazyData: true
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2015-10-27 11:45:25 UTC; davor
Author: Davor Cubranic [aut, cre], Mark Pickup [aut], Paul Gustafson [aut], Geoffrey Evans [aut]
Maintainer: Davor Cubranic <cubranic@stat.ubc.ca>
Repository: CRAN
Date/Publication: 2015-10-27 16:25:54

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Package ncvreg updated to version 3.5-0 with previous version 3.4-0 dated 2015-05-04

Title: Regularization Paths for SCAD and MCP Penalized Regression Models
Description: Efficient algorithms for fitting regularization paths for linear or logistic regression models penalized by MCP or SCAD, with optional additional L2 penalty.
Author: Patrick Breheny [aut,cre], Sangin Lee [ctb]
Maintainer: Patrick Breheny <patrick-breheny@uiowa.edu>

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Package gimme updated to version 0.1-6 with previous version 0.1-5 dated 2015-10-20

Title: Group Iterative Multiple Model Estimation
Description: Automated identification and estimation of group- and individual-level relations in time series data from within a structural equation modeling framework.
Author: Stephanie Lane [aut, cre, trl], Kathleen Gates [aut], Peter Molenaar [aut], Michael Hallquist [ctb], Hallie Pike [ctb]
Maintainer: Stephanie Lane <slane@unc.edu>

Diff between gimme versions 0.1-5 dated 2015-10-20 and 0.1-6 dated 2015-10-27

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Package jug updated to version 0.1.1 with previous version 0.1.0 dated 2015-10-27

Title: Create a Simple Web API for your R Functions
Description: A set of convenience functions to build simple APIs.
Author: Bart Smeets
Maintainer: Bart Smeets <bartsmeets86@gmail.com>

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Package spatgraphs updated to version 3.0 with previous version 2.62 dated 2012-09-26

Title: Graph Edge Computations for Spatial Point Patterns
Description: Graphs (or networks) and graph component calculations for spatial locations in *D.
Author: Tuomas Rajala
Maintainer: Tuomas Rajala <tuomas.rajala@iki.fi>

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Package statmod updated to version 1.4.22 with previous version 1.4.21 dated 2015-03-30

Title: Statistical Modeling
Description: A collection of algorithms and functions to aid statistical modeling. Includes growth curve comparisons, limiting dilution analysis (aka ELDA), mixed linear models, heteroscedastic regression, inverse-Gaussian probability calculations, Gauss quadrature and a secure convergence algorithm for nonlinear models. Includes advanced generalized linear model functions that implement secure convergence, dispersion modeling and Tweedie power-law families.
Author: Gordon Smyth [cre, aut], Yifang Hu [ctb], Peter Dunn [ctb], Belinda Phipson [ctb], Yunshun Chen [ctb]
Maintainer: Gordon Smyth <smyth@wehi.edu.au>

Diff between statmod versions 1.4.21 dated 2015-03-30 and 1.4.22 dated 2015-10-27

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Package settings updated to version 0.2.4 with previous version 0.2.2 dated 2015-06-01

Title: Software Option Settings Manager for R
Description: Provides option settings management that goes beyond R's default 'options' function. With this package, users can define their own option settings manager holding option names, default values and (if so desired) ranges or sets of allowed option values that will be automatically checked. Settings can then be retrieved, altered and reset to defaults with ease. For R programmers and package developers it offers cloning and merging functionality which allows for conveniently defining global and local options, possibly in a multilevel options hierarchy. See the package vignette for some examples concerning functions, S4 classes, and reference classes. There are convenience functions to reset par() and options() to their 'factory defaults'.
Author: Mark van der Loo
Maintainer: Mark van der Loo <mark.vanderloo@gmail.com>

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Package GGIR updated to version 1.2-0 with previous version 1.1-5 dated 2015-05-11

Title: Raw Accelerometer Data Analysis
Description: A tool to process and analyse data collected with wearable raw acceleration sensors. The package has been developed and tested for binary data from GENEActiv and GENEA devices and .csv-export data from Actigraph devices. These devices are currently widely used in research on human daily physical activity.
Author: Vincent T van Hees [aut, cre], Zhou Fang [ctb], Jing Hua Zhao [ctb], Severine Sabia [ctb]
Maintainer: Vincent T van Hees <vincentvanhees@gmail.com>

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Package geomorph updated to version 2.1.7-1 with previous version 2.1.7 dated 2015-09-21

Title: Geometric Morphometric Analyses of 2D/3D Landmark Data
Description: Read, manipulate, and digitize landmark data, generate shape variables via Procrustes analysis for points, curves and surfaces, perform shape analyses, and provide graphical depictions of shapes and patterns of shape variation.
Author: Dean Adams, Michael Collyer, Emma Sherratt
Maintainer: Dean Adams <dcadams@iastate.edu>

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New package ACSNMineR with initial version 0.10.15
Package: ACSNMineR
Type: Package
Title: Gene Enrichment Analysis from ACSN Maps or Gmt Files
Version: 0.10.15
Date: 2015-10-15
Authors@R: c(person("Paul", "Deveau", role = c("aut", "cre"), email = "paul.deveau@curie.fr"), person("Eric", "Bonnet",role = "aut", email = "eric.bonnet@curie.fr"))
Maintainer: Paul Deveau <paul.deveau@curie.fr>
Description: Compute and represent gene set enrichment or depletion from your data based on pre-saved maps from the Atlas of Cancer Signalling Networks (ACSN) or user imported maps. The gene set enrichment can be run with hypergeometric test or Fisher exact test, and can use multiple corrections. Visualization of data can be done either by barplots or heatmaps.
Depends: R (>= 3.1.0),ggplot2, gridExtra
Suggests: knitr, rmarkdown
License: GPL-2
LazyData: true
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2015-10-27 08:21:34 UTC; User
Author: Paul Deveau [aut, cre], Eric Bonnet [aut]
Repository: CRAN
Date/Publication: 2015-10-27 09:51:35

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Package rcbalance updated to version 1.7.2 with previous version 1.7.1 dated 2015-09-01

Title: Large, Sparse Optimal Matching with Refined Covariate Balance
Description: Tools for large, sparse optimal matching of treated units and control units in observational studies. Provisions are made for refined covariate balance constraints, which include fine and near-fine balance as special cases. Matches are optimal in the sense that they are computed as solutions to network optimization problems rather than greedy algorithms.
Author: Samuel D. Pimentel
Maintainer: Samuel D. Pimentel <spi@wharton.upenn.edu>

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Package orsk updated to version 1.0-2 with previous version 1.0-1 dated 2013-10-10

Title: Converting Odds Ratio to Relative Risk in Cohort Studies with Partial Data Information
Description: Convert the Odds Ratio to the Relative Risk in Cohort Studies with Partial Data Information.
Author: Zhu Wang
Maintainer: Zhu Wang <zwang@connecticutchildrens.org>

Diff between orsk versions 1.0-1 dated 2013-10-10 and 1.0-2 dated 2015-10-27

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Package mclust updated to version 5.1 with previous version 5.0.2 dated 2015-07-08

Title: Normal Mixture Modelling for Model-Based Clustering, Classification, and Density Estimation
Description: Normal Mixture Modelling fitted via EM algorithm for Model-Based Clustering, Classification, and Density Estimation, including Bayesian regularization.
Author: Chris Fraley [aut], Adrian E. Raftery [aut], Luca Scrucca [aut, cre], Thomas Brendan Murphy [ctb], Michael Fop [ctb]
Maintainer: Luca Scrucca <luca@stat.unipg.it>

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Package matrixStats updated to version 0.15.0 with previous version 0.14.2 dated 2015-06-24

Title: Methods that Apply to Rows and Columns of Matrices (and to Vectors)
Description: Methods operating on rows and columns of matrices, e.g. col / rowMedians(), col / rowRanks(), and col / rowSds(). There are also some vector-based methods, e.g. binMeans(), madDiff() and weightedMedians(). All methods have been optimized for speed and memory usage.
Author: Henrik Bengtsson [aut, cre, cph], Hector Corrada Bravo [ctb], Robert Gentleman [ctb], Ola Hossjer [ctb], Harris Jaffee [ctb], Dongcan Jiang [ctb], Peter Langfelder [ctb]
Maintainer: Henrik Bengtsson <henrikb@braju.com>

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New package jug with initial version 0.1.0
Package: jug
Type: Package
Title: Create a Simple Web API for your R Functions
Version: 0.1.0
Author: Bart Smeets
Maintainer: Bart Smeets <bartsmeets86@gmail.com>
Description: A set of convenience functions to build simple APIs.
License: MIT + file LICENSE
LazyData: TRUE
Depends: R (>= 3.1.0), magrittr, R6
Imports: mime, httpuv, stringi, infuser, jsonlite, base64enc
Suggests: testthat, knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2015-10-27 05:53:13 UTC; jsmeet5
Repository: CRAN
Date/Publication: 2015-10-27 08:09:58

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Package hdnom updated to version 2.1 with previous version 2.0 dated 2015-09-16

Title: Nomograms for High-Dimensional Cox Models
Description: Build nomograms for high-dimensional Cox models, with support for model validation and calibration.
Author: Miaozhu Li <miaozhu.li@duke.edu>, Nan Xiao <nanx@uchicago.edu>
Maintainer: Nan Xiao <nanx@uchicago.edu>

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New package dina with initial version 1.0
Package: dina
Type: Package
Title: Bayesian Estimation of DINA Model
Version: 1.0
Date: 2015-10-19
Authors@R: c(person("Steven Andrew", "Culpepper", role = c("aut", "cph","cre"), email = "sculpepp@illinois.edu"))
Maintainer: Steven Andrew Culpepper <sculpepp@illinois.edu>
Description: Estimate the Deterministic Input, Noisy ``And'' Gate (DINA) cognitive diagnostic model parameters using the Gibbs sampler described by Culpepper (2015) DOI: 10.3102/1076998615595403.
License: GPL (>= 2)
Imports: Rcpp
LinkingTo: Rcpp, RcppArmadillo
Depends: R (>= 3.0.1)
Packaged: 2015-10-27 01:30:34 UTC; sculpepp
Author: Steven Andrew Culpepper [aut, cph, cre]
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-10-27 08:09:54

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Package calmate updated to version 0.12.1 with previous version 0.12.0 dated 2015-02-23

Title: Improved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation
Description: A multi-array post-processing method of allele-specific copy-number estimates (ASCNs).
Author: Maria Ortiz [aut, ctb], Ander Aramburu [ctb], Henrik Bengtsson [aut, cre, cph], Pierre Neuvial [aut, ctb], Angel Rubio [aut, ctb]
Maintainer: Henrik Bengtsson <henrikb@braju.com>

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Package ACNE updated to version 0.8.1 with previous version 0.8.0 dated 2015-02-23

Title: Affymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization
Description: A summarization method to estimate allele-specific copy number signals for Affymetrix SNP microarrays using non-negative matrix factorization (NMF).
Author: Maria Ortiz [aut], Henrik Bengtsson [aut, cre, cph], Angel Rubio [aut]
Maintainer: Henrik Bengtsson <henrikb@braju.com>

Diff between ACNE versions 0.8.0 dated 2015-02-23 and 0.8.1 dated 2015-10-27

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