Title: Solvers for Large Scale Eigenvalue and SVD Problems
Description: An R wrapper of the 'ARPACK' library
<http://www.caam.rice.edu/software/ARPACK/> to solve large scale
eigenvalue/vector problems. It is typically used to compute a few
eigenvalues/vectors of an n by n matrix, e.g., the k largest eigenvalues,
which is usually more efficient than eigen() if k << n. This package
provides the 'eigs()' function which does the similar job as in 'Matlab',
'Octave', 'Python SciPy' and 'Julia'. It also provides the 'svds()' function
to calculate the largest k singular values and corresponding
singular vectors of a real matrix. Matrices can be given in either dense
or sparse form.
Author: Yixuan Qiu, Jiali Mei and authors of the ARPACK library. See file
AUTHORS for details.
Maintainer: Yixuan Qiu <yixuan.qiu@cos.name>
Diff between rARPACK versions 0.8-0 dated 2015-10-31 and 0.8-1 dated 2015-10-31
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- inst/NEWS.Rd | 8 ++++++++ src/svds.cpp | 4 +++- 4 files changed, 18 insertions(+), 8 deletions(-)
Title: Import/Export Routines for MALDIquant
Description: Functions for reading (tab, csv, Bruker fid, Ciphergen
XML, mzXML, mzML, imzML, Analyze 7.5, CDF, mMass MSD) and
writing (tab, csv, mMass MSD, mzML, imzML) different file
formats of mass spectrometry data into/from MALDIquant objects.
Author: Sebastian Gibb [aut, cre],
Pietro Franceschi [ctb]
Maintainer: Sebastian Gibb <mail@sebastiangibb.de>
Diff between MALDIquantForeign versions 0.9 dated 2014-08-11 and 0.10 dated 2015-10-31
MALDIquantForeign-0.10/MALDIquantForeign/DESCRIPTION | 27 - MALDIquantForeign-0.10/MALDIquantForeign/MD5 | 174 ++++----- MALDIquantForeign-0.10/MALDIquantForeign/NAMESPACE | 16 MALDIquantForeign-0.10/MALDIquantForeign/NEWS | 41 ++ MALDIquantForeign-0.10/MALDIquantForeign/R/AllGenerics.R | 4 MALDIquantForeign-0.10/MALDIquantForeign/R/MALDIquantForeign-parallel.R |only MALDIquantForeign-0.10/MALDIquantForeign/R/analyze-functions.R | 13 MALDIquantForeign-0.10/MALDIquantForeign/R/base64encode-functions.R | 13 MALDIquantForeign-0.10/MALDIquantForeign/R/compression-functions.R | 39 -- MALDIquantForeign-0.10/MALDIquantForeign/R/createMassObject-functions.R | 38 +- MALDIquantForeign-0.10/MALDIquantForeign/R/download-function.R | 20 - MALDIquantForeign-0.10/MALDIquantForeign/R/export-functions.R | 1 MALDIquantForeign-0.10/MALDIquantForeign/R/export-methods.R | 111 +++++ MALDIquantForeign-0.10/MALDIquantForeign/R/exportImzMl-methods.R |only MALDIquantForeign-0.10/MALDIquantForeign/R/exportMsd-methods.R | 1 MALDIquantForeign-0.10/MALDIquantForeign/R/exportMzMl-methods.R | 1 MALDIquantForeign-0.10/MALDIquantForeign/R/exportTab-methods.R | 1 MALDIquantForeign-0.10/MALDIquantForeign/R/fileFormats.R | 26 - MALDIquantForeign-0.10/MALDIquantForeign/R/filename-functions.R | 34 - MALDIquantForeign-0.10/MALDIquantForeign/R/filename-methods.R | 5 MALDIquantForeign-0.10/MALDIquantForeign/R/ibd-functions.R |only MALDIquantForeign-0.10/MALDIquantForeign/R/import-functions.R | 77 +++- MALDIquantForeign-0.10/MALDIquantForeign/R/importAnalyze-functions.R | 16 MALDIquantForeign-0.10/MALDIquantForeign/R/importAuto-functions.R | 14 MALDIquantForeign-0.10/MALDIquantForeign/R/importBrukerFlex-functions.R | 9 MALDIquantForeign-0.10/MALDIquantForeign/R/importCdf-functions.R | 9 MALDIquantForeign-0.10/MALDIquantForeign/R/importCiphergenXml-functions.R | 13 MALDIquantForeign-0.10/MALDIquantForeign/R/importImzMl-functions.R | 121 +++--- MALDIquantForeign-0.10/MALDIquantForeign/R/importMsd-functions.R |only MALDIquantForeign-0.10/MALDIquantForeign/R/importMzMl-functions.R | 18 MALDIquantForeign-0.10/MALDIquantForeign/R/importMzXml-functions.R | 18 MALDIquantForeign-0.10/MALDIquantForeign/R/importTab-functions.R | 25 - MALDIquantForeign-0.10/MALDIquantForeign/R/imzMl-functions.R |only MALDIquantForeign-0.10/MALDIquantForeign/R/list.files-functions.R | 7 MALDIquantForeign-0.10/MALDIquantForeign/R/msd-functions.R | 4 MALDIquantForeign-0.10/MALDIquantForeign/R/msg-functions.R |only MALDIquantForeign-0.10/MALDIquantForeign/R/mzMl-functions.R | 189 +++++++++- MALDIquantForeign-0.10/MALDIquantForeign/R/package.R | 7 MALDIquantForeign-0.10/MALDIquantForeign/R/parseCiphergenXml.R | 5 MALDIquantForeign-0.10/MALDIquantForeign/R/parseMsd.R |only MALDIquantForeign-0.10/MALDIquantForeign/R/parseMzMl.R | 38 -- MALDIquantForeign-0.10/MALDIquantForeign/R/sanitize-functions.R | 4 MALDIquantForeign-0.10/MALDIquantForeign/R/testChecksum-functions.R | 14 MALDIquantForeign-0.10/MALDIquantForeign/R/uuid-functions.R |only MALDIquantForeign-0.10/MALDIquantForeign/build/vignette.rds |binary MALDIquantForeign-0.10/MALDIquantForeign/inst/doc/MALDIquantForeign-intro.pdf |binary MALDIquantForeign-0.10/MALDIquantForeign/inst/exampledata/compressed/csv1.csv.gz |binary MALDIquantForeign-0.10/MALDIquantForeign/inst/exampledata/tiny1.msd |only MALDIquantForeign-0.10/MALDIquantForeign/inst/exampledata/tiny_continuous.ibd |binary MALDIquantForeign-0.10/MALDIquantForeign/inst/exampledata/tiny_continuous.imzML | 4 MALDIquantForeign-0.10/MALDIquantForeign/inst/exampledata/tiny_processed.ibd |binary MALDIquantForeign-0.10/MALDIquantForeign/inst/exampledata/tiny_processed.imzML | 4 MALDIquantForeign-0.10/MALDIquantForeign/man/MALDIquantForeign-package.Rd | 3 MALDIquantForeign-0.10/MALDIquantForeign/man/MALDIquantForeign-parallel.Rd |only MALDIquantForeign-0.10/MALDIquantForeign/man/base64-encode.Rd | 3 MALDIquantForeign-0.10/MALDIquantForeign/man/export-methods.Rd | 12 MALDIquantForeign-0.10/MALDIquantForeign/man/exportImzMl-methods.Rd |only MALDIquantForeign-0.10/MALDIquantForeign/man/exportMsd-methods.Rd | 13 MALDIquantForeign-0.10/MALDIquantForeign/man/exportMzMl-methods.Rd | 25 - MALDIquantForeign-0.10/MALDIquantForeign/man/exportTab-methods.Rd | 11 MALDIquantForeign-0.10/MALDIquantForeign/man/import-functions.Rd | 13 MALDIquantForeign-0.10/MALDIquantForeign/man/importAnalyze-functions.Rd | 3 MALDIquantForeign-0.10/MALDIquantForeign/man/importBrukerFlex-functions.Rd | 5 MALDIquantForeign-0.10/MALDIquantForeign/man/importCdf-functions.Rd | 7 MALDIquantForeign-0.10/MALDIquantForeign/man/importCiphergenXml-functions.Rd | 5 MALDIquantForeign-0.10/MALDIquantForeign/man/importImzMl-functions.Rd | 17 MALDIquantForeign-0.10/MALDIquantForeign/man/importMsd-functions.Rd |only MALDIquantForeign-0.10/MALDIquantForeign/man/importMzMl-functions.Rd | 5 MALDIquantForeign-0.10/MALDIquantForeign/man/importMzXml-functions.Rd | 5 MALDIquantForeign-0.10/MALDIquantForeign/man/importTab-functions.Rd | 5 MALDIquantForeign-0.10/MALDIquantForeign/man/supportedFileFormats-functions.Rd | 6 MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_compression-functions.R | 10 MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_createMassObject-functions.R | 27 - MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_download-functions.R | 36 + MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_exportImzMl-methods.R |only MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_exportMsd-methods.R | 1 MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_exportMzMl-methods.R | 1 MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_exportTab-methods.R | 1 MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_fileFormats.R |only MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_filename-functions.R | 20 + MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_ibd-functions.R |only MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_importBrukerFlex-functions.R | 11 MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_importCdf-functions.R | 12 MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_importCiphergenXml-functions.R | 10 MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_importImzMl-functions.R | 44 +- MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_importMsd-functions.R |only MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_importMzMl-functions.R | 28 - MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_importMzXml-functions.R | 28 - MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_importTab-functions.R | 26 - MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_list.files-functions.R |only MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_msg-functions.R |only MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_sanitize-functions.R | 1 MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_testChecksum-functions.R | 1 MALDIquantForeign-0.10/MALDIquantForeign/tests/testthat/test_uuid-functions.R |only MALDIquantForeign-0.9/MALDIquantForeign/man/cleanFilename.Rd |only MALDIquantForeign-0.9/MALDIquantForeign/man/composeFilename-methods.Rd |only MALDIquantForeign-0.9/MALDIquantForeign/man/createMassObject.Rd |only MALDIquantForeign-0.9/MALDIquantForeign/man/fileExtension.Rd |only MALDIquantForeign-0.9/MALDIquantForeign/man/mzMlHandlers.Rd |only MALDIquantForeign-0.9/MALDIquantForeign/man/parseCiphergenXml.Rd |only MALDIquantForeign-0.9/MALDIquantForeign/man/parseMzMl.Rd |only 101 files changed, 995 insertions(+), 561 deletions(-)
More information about MALDIquantForeign at CRAN
Permanent link
Title: Client for the Captricity API
Description: Get text from images of text using Captricity Optical Character
Recognition (OCR) API. Captricity allows you to get text from handwritten
forms --- think surveys --- and other structured paper documents. And it can
output data in form a delimited file keeping field information intact. For more
information, read https://shreddr.captricity.com/developer/overview/.
Author: Gaurav Sood [aut, cre]
Maintainer: Gaurav Sood <gsood07@gmail.com>
Diff between captr versions 0.1 dated 2015-10-04 and 0.1.2 dated 2015-10-31
DESCRIPTION | 22 +++++++++++++--------- LICENSE |only MD5 | 40 ++++++++++++++++++++++++---------------- NAMESPACE | 2 +- NEWS |only R/set_batch_template.R | 2 +- README.md |only build |only inst/doc |only man/batch_price.Rd | 2 +- man/captr-package.Rd | 6 +++--- man/create_batch.Rd | 2 +- man/get_all.Rd | 2 +- man/get_instance_set.Rd | 2 +- man/get_template_id.Rd | 4 ++-- man/list_instance_sets.Rd | 4 ++-- man/set_batch_template.Rd | 6 +++--- man/set_token.Rd | 4 ++-- man/submit_batch.Rd | 2 +- man/test_readiness.Rd | 2 +- man/track_progress.Rd | 2 +- man/upload_image.Rd | 2 +- vignettes |only 23 files changed, 59 insertions(+), 47 deletions(-)
Title: Ternary Search Tree for Auto-Completion and Spell Checking
Description: A ternary search tree is a type of prefix tree with up to three children and the ability for incremental string search. The package uses this ability for word auto-completion and spell checking. Includes a dataset with the 10001 most frequent English words.
Author: Ricardo Merino [aut, cre],
Samantha Fernandez [ctb]
Maintainer: Ricardo Merino <ricardo.merino.raldua@gmail.com>
Diff between TSTr versions 1.1 dated 2015-10-07 and 1.2 dated 2015-10-31
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- build/TSTr.pdf |binary 3 files changed, 6 insertions(+), 6 deletions(-)
Title: 'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra
Library
Description: 'Armadillo' is a templated C++ linear algebra library (by Conrad
Sanderson) that aims towards a good balance between speed and ease of use. Integer,
floating point and complex numbers are supported, as well as a subset of
trigonometric and statistics functions. Various matrix decompositions are
provided through optional integration with LAPACK and ATLAS libraries.
The 'RcppArmadillo' package includes the header files from the templated
'Armadillo' library. Thus users do not need to install 'Armadillo' itself in
order to use 'RcppArmadillo'. 'Armadillo' is licensed under the MPL 2.0, while
'RcppArmadillo' (the 'Rcpp' bindings/bridge to Armadillo) is licensed under the
GNU GPL version 2 or later, as is the rest of 'Rcpp'.
Author: Dirk Eddelbuettel, Romain Francois and Doug Bates
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppArmadillo versions 0.6.100.0.0 dated 2015-10-04 and 0.6.200.2.0 dated 2015-10-31
RcppArmadillo-0.6.100.0.0/RcppArmadillo/inst/include/armadillo_bits/arpack_bones.hpp |only RcppArmadillo-0.6.100.0.0/RcppArmadillo/inst/include/armadillo_bits/arpack_wrapper.hpp |only RcppArmadillo-0.6.100.0.0/RcppArmadillo/inst/include/armadillo_bits/atlas_bones.hpp |only RcppArmadillo-0.6.100.0.0/RcppArmadillo/inst/include/armadillo_bits/atlas_wrapper.hpp |only RcppArmadillo-0.6.100.0.0/RcppArmadillo/inst/include/armadillo_bits/blas_bones.hpp |only RcppArmadillo-0.6.100.0.0/RcppArmadillo/inst/include/armadillo_bits/blas_wrapper.hpp |only RcppArmadillo-0.6.100.0.0/RcppArmadillo/inst/include/armadillo_bits/fn_norm_sparse.hpp |only RcppArmadillo-0.6.100.0.0/RcppArmadillo/inst/include/armadillo_bits/forward_bones.hpp |only RcppArmadillo-0.6.100.0.0/RcppArmadillo/inst/include/armadillo_bits/hdf5_bones.hpp |only RcppArmadillo-0.6.100.0.0/RcppArmadillo/inst/include/armadillo_bits/lapack_bones.hpp |only RcppArmadillo-0.6.100.0.0/RcppArmadillo/inst/include/armadillo_bits/lapack_wrapper.hpp |only RcppArmadillo-0.6.100.0.0/RcppArmadillo/inst/include/armadillo_bits/superlu_bones.hpp |only RcppArmadillo-0.6.100.0.0/RcppArmadillo/inst/include/armadillo_bits/superlu_wrapper.hpp |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/ChangeLog | 23 RcppArmadillo-0.6.200.2.0/RcppArmadillo/DESCRIPTION | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/MD5 | 889 +-- RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/NEWS.Rd | 21 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/doc/RcppArmadillo-intro.pdf |binary RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/doc/RcppArmadillo-unitTests.pdf |binary RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo | 34 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/BaseCube_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/BaseCube_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Base_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Base_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Col_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Col_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Cube_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Cube_meat.hpp | 28 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/GenCube_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/GenCube_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Gen_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Gen_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/GlueCube_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/GlueCube_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Glue_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Glue_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Mat_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Mat_meat.hpp | 28 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/OpCube_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/OpCube_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Op_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Op_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Proxy.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/ProxyCube.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Row_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/Row_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SizeCube_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SizeCube_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SizeMat_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SizeMat_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpBase_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpBase_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpCol_bones.hpp | 10 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpCol_meat.hpp | 9 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpGlue_bones.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpGlue_meat.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpMat_bones.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpMat_iterators_meat.hpp | 11 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpMat_meat.hpp | 36 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpOp_bones.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpOp_meat.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpProxy.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpRow_bones.hpp | 10 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpRow_meat.hpp | 9 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpSubview_bones.hpp | 13 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpSubview_iterators_meat.hpp | 11 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpSubview_meat.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpValProxy_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/SpValProxy_meat.hpp | 11 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/access.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/arma_boost.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/arma_cmath.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/arma_config.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/arma_forward.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/arma_ostream_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/arma_ostream_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/arma_rng.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/arma_rng_cxx11.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/arma_rng_cxx98.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/arma_static_check.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/arma_version.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/arrayops_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/arrayops_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/auxlib_bones.hpp | 79 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/auxlib_meat.hpp | 2402 ++++------ RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/compiler_setup.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/compiler_setup_post.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/cond_rel_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/cond_rel_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/config.hpp | 27 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/config.hpp.cmake |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/constants.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/constants_compat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/debug.hpp | 80 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/def_arpack.hpp |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/def_atlas.hpp |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/def_blas.hpp |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/def_hdf5.hpp |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/def_lapack.hpp |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/def_superlu.hpp |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/diagmat_proxy.hpp | 120 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/diagview_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/diagview_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/diskio_bones.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/diskio_meat.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/distr_param.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/eGlueCube_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/eGlueCube_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/eGlue_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/eGlue_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/eOpCube_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/eOpCube_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/eOp_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/eOp_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/eglue_core_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/eglue_core_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/eop_aux.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/eop_core_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/eop_core_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fft_engine.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/field_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/field_meat.hpp | 24 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_accu.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_all.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_any.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_as_scalar.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_chol.hpp | 35 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_clamp.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_cond.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_conv.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_conv_to.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_cor.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_cov.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_cross.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_cumprod.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_cumsum.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_det.hpp | 14 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_diagmat.hpp | 42 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_diagvec.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_diff.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_dot.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_eig_gen.hpp | 298 - RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_eig_pair.hpp | 221 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_eig_sym.hpp | 18 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_eigs_gen.hpp | 16 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_eigs_sym.hpp | 16 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_elem.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_eps.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_expmat.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_eye.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_fft.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_fft2.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_find.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_find_unique.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_flip.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_hist.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_histc.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_inplace_strans.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_inplace_trans.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_interp1.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_inv.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_join.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_kron.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_log_det.hpp | 10 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_lu.hpp | 10 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_max.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_mean.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_median.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_min.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_misc.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_n_unique.hpp | 7 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_nonzeros.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_norm.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_normalise.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_numel.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_ones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_pinv.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_princomp.hpp | 16 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_prod.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_qr.hpp | 10 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_qz.hpp | 18 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_randg.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_randi.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_randn.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_randu.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_rank.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_repmat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_reshape.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_resize.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_schur.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_shuffle.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_size.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_solve.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_sort.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_sort_index.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_speye.hpp | 7 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_spones.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_sprandn.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_sprandu.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_spsolve.hpp | 19 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_stddev.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_strans.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_sum.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_svd.hpp | 20 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_svds.hpp | 35 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_syl_lyap.hpp | 10 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_symmat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_toeplitz.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_trace.hpp | 102 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_trans.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_trig.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_trimat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_trunc_exp.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_trunc_log.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_unique.hpp | 14 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_var.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_vectorise.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/fn_zeros.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_conv_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_conv_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_cor_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_cor_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_cov_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_cov_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_cross_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_cross_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_hist_bones.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_hist_meat.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_histc_bones.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_histc_meat.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_join_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_join_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_kron_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_kron_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_max_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_max_meat.hpp | 10 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_min_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_min_meat.hpp | 10 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_mixed_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_mixed_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_relational_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_relational_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_solve_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_solve_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_times_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_times_meat.hpp | 79 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_toeplitz_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/glue_toeplitz_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/gmm_diag_bones.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/gmm_diag_meat.hpp | 27 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/gmm_misc_bones.hpp | 13 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/gmm_misc_meat.hpp | 13 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/hdf5_misc.hpp | 10 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/include_atlas.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/include_hdf5.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/include_superlu.hpp | 20 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/injector_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/injector_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/memory.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mtGlueCube_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mtGlueCube_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mtGlue_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mtGlue_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mtOpCube_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mtOpCube_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mtOp_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mtOp_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mtSpOp_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mtSpOp_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mul_gemm.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mul_gemm_mixed.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mul_gemv.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mul_herk.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/mul_syrk.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_all_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_all_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_any_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_any_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_chol_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_chol_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_clamp_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_clamp_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_cor_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_cor_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_cov_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_cov_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_cumprod_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_cumprod_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_cumsum_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_cumsum_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_cx_scalar_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_cx_scalar_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_diagmat_bones.hpp | 19 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_diagmat_meat.hpp | 134 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_diagvec_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_diagvec_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_diff_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_diff_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_dot_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_dot_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_dotext_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_dotext_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_expmat_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_expmat_meat.hpp | 14 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_fft_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_fft_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_find_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_find_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_find_unique_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_find_unique_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_flip_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_flip_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_hist_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_hist_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_htrans_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_htrans_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_inv_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_inv_meat.hpp | 10 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_max_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_max_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_mean_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_mean_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_median_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_median_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_min_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_min_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_misc_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_misc_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_nonzeros_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_nonzeros_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_norm_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_norm_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_normalise_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_normalise_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_pinv_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_pinv_meat.hpp | 10 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_princomp_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_princomp_meat.hpp | 12 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_prod_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_prod_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_relational_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_relational_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_repmat_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_repmat_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_reshape_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_reshape_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_resize_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_resize_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_shuffle_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_shuffle_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_sort_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_sort_index_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_sort_index_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_sort_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_stddev_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_stddev_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_strans_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_strans_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_sum_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_sum_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_symmat_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_symmat_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_toeplitz_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_toeplitz_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_trimat_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_trimat_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_unique_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_unique_meat.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_var_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_var_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_vectorise_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/op_vectorise_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/operator_cube_div.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/operator_cube_minus.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/operator_cube_plus.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/operator_cube_relational.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/operator_cube_schur.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/operator_cube_times.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/operator_div.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/operator_minus.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/operator_ostream.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/operator_plus.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/operator_relational.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/operator_schur.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/operator_times.hpp | 18 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/podarray_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/podarray_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/promote_type.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/restrictors.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/running_stat_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/running_stat_meat.hpp | 10 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/running_stat_vec_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/running_stat_vec_meat.hpp | 10 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/sp_auxlib_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/sp_auxlib_meat.hpp | 59 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/span.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spdiagview_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spdiagview_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spglue_join_bones.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spglue_join_meat.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spglue_minus_bones.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spglue_minus_meat.hpp | 7 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spglue_plus_bones.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spglue_plus_meat.hpp | 7 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spglue_times_bones.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spglue_times_meat.hpp | 7 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_diagmat_bones.hpp |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_diagmat_meat.hpp |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_htrans_bones.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_htrans_meat.hpp | 7 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_max_bones.hpp | 7 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_max_meat.hpp | 7 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_mean_bones.hpp | 7 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_mean_meat.hpp | 7 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_min_bones.hpp | 7 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_min_meat.hpp | 7 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_misc_bones.hpp | 18 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_misc_meat.hpp | 107 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_strans_bones.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_strans_meat.hpp | 7 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_sum_bones.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_sum_meat.hpp | 7 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_var_bones.hpp | 9 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/spop_var_meat.hpp | 9 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/strip.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/subview_bones.hpp | 8 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/subview_cube_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/subview_cube_each_bones.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/subview_cube_each_meat.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/subview_cube_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/subview_each_bones.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/subview_each_meat.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/subview_elem1_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/subview_elem1_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/subview_elem2_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/subview_elem2_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/subview_field_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/subview_field_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/subview_meat.hpp | 10 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/traits.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/typedef_elem.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/typedef_elem_check.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/typedef_mat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/typedef_mat_fixed.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/unwrap.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/unwrap_cube.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/unwrap_spmat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/upgrade_val.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/wall_clock_bones.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/wall_clock_meat.hpp | 6 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/wrapper_arpack.hpp |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/wrapper_atlas.hpp |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/wrapper_blas.hpp |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/wrapper_lapack.hpp |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/wrapper_superlu.hpp |only RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/xtrans_mat_bones.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/xtrans_mat_meat.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/xvec_htrans_bones.hpp | 5 RcppArmadillo-0.6.200.2.0/RcppArmadillo/inst/include/armadillo_bits/xvec_htrans_meat.hpp | 5 459 files changed, 4144 insertions(+), 3685 deletions(-)
Title: Fast and Simple 'MongoDB' Client for R
Description: High-level 'MongoDB' client based on 'jsonlite' and 'mongoc' driver.
Includes support for aggregation, indexing, map-reduce, streaming, 'TLS'
encryption and 'SASL' authentication.
Author: Jeroen Ooms [aut, cre],
MongoDB, Inc [cph] (Author of mongo-c-driver)
Maintainer: Jeroen Ooms <jeroen.ooms@stat.ucla.edu>
Diff between mongolite versions 0.5 dated 2015-07-27 and 0.6 dated 2015-10-31
mongolite-0.5/mongolite/src/Makevars |only mongolite-0.5/mongolite/src/bson/bson-version.c |only mongolite-0.6/mongolite/DESCRIPTION | 6 mongolite-0.6/mongolite/MD5 | 260 mongolite-0.6/mongolite/NAMESPACE | 1 mongolite-0.6/mongolite/NEWS | 6 mongolite-0.6/mongolite/R/iter.R | 2 mongolite-0.6/mongolite/R/mongo.R | 12 mongolite-0.6/mongolite/R/object.R | 12 mongolite-0.6/mongolite/build/vignette.rds |binary mongolite-0.6/mongolite/configure | 115 mongolite-0.6/mongolite/inst/CITATION | 2 mongolite-0.6/mongolite/inst/doc/intro.html | 4 mongolite-0.6/mongolite/src/Makevars.in |only mongolite-0.6/mongolite/src/Makevars.win | 4 mongolite-0.6/mongolite/src/bson/bcon.c | 6 mongolite-0.6/mongolite/src/bson/bson-compat.h | 10 mongolite-0.6/mongolite/src/bson/bson-config.h | 2 mongolite-0.6/mongolite/src/bson/bson-endian.h | 1 mongolite-0.6/mongolite/src/bson/bson-iter.c | 113 mongolite-0.6/mongolite/src/bson/bson-json.c | 30 mongolite-0.6/mongolite/src/bson/bson-macros.h | 81 mongolite-0.6/mongolite/src/bson/bson-memory.c | 20 mongolite-0.6/mongolite/src/bson/bson-memory.h | 1 mongolite-0.6/mongolite/src/bson/bson-oid.c | 36 mongolite-0.6/mongolite/src/bson/bson-reader.c | 36 mongolite-0.6/mongolite/src/bson/bson-stdint.h | 2 mongolite-0.6/mongolite/src/bson/bson-string.c | 16 mongolite-0.6/mongolite/src/bson/bson-thread-private.h | 2 mongolite-0.6/mongolite/src/bson/bson-types.h | 4 mongolite-0.6/mongolite/src/bson/bson-utf8.c | 12 mongolite-0.6/mongolite/src/bson/bson-value.c | 4 mongolite-0.6/mongolite/src/bson/bson-version-functions.c |only mongolite-0.6/mongolite/src/bson/bson-version-functions.h |only mongolite-0.6/mongolite/src/bson/bson-version.h | 33 mongolite-0.6/mongolite/src/bson/bson-writer.c | 12 mongolite-0.6/mongolite/src/bson/bson.c | 235 mongolite-0.6/mongolite/src/bson/bson.h | 1 mongolite-0.6/mongolite/src/client.c | 4 mongolite-0.6/mongolite/src/collection.c | 10 mongolite-0.6/mongolite/src/cursor.c | 4 mongolite-0.6/mongolite/src/mongoc/mongoc-array-private.h | 2 mongolite-0.6/mongolite/src/mongoc/mongoc-array.c | 42 mongolite-0.6/mongolite/src/mongoc/mongoc-async-cmd-private.h |only mongolite-0.6/mongolite/src/mongoc/mongoc-async-cmd.c |only mongolite-0.6/mongolite/src/mongoc/mongoc-async-private.h |only mongolite-0.6/mongolite/src/mongoc/mongoc-async.c |only mongolite-0.6/mongolite/src/mongoc/mongoc-buffer-private.h | 7 mongolite-0.6/mongolite/src/mongoc/mongoc-buffer.c | 86 mongolite-0.6/mongolite/src/mongoc/mongoc-bulk-operation-private.h | 32 mongolite-0.6/mongolite/src/mongoc/mongoc-bulk-operation.c | 140 mongolite-0.6/mongolite/src/mongoc/mongoc-bulk-operation.h | 7 mongolite-0.6/mongolite/src/mongoc/mongoc-client-pool.c | 100 mongolite-0.6/mongolite/src/mongoc/mongoc-client-pool.h | 4 mongolite-0.6/mongolite/src/mongoc/mongoc-client-private.h | 74 mongolite-0.6/mongolite/src/mongoc/mongoc-client.c | 594 - mongolite-0.6/mongolite/src/mongoc/mongoc-client.h | 18 mongolite-0.6/mongolite/src/mongoc/mongoc-cluster-private.h | 188 mongolite-0.6/mongolite/src/mongoc/mongoc-cluster.c | 3074 +++------- mongolite-0.6/mongolite/src/mongoc/mongoc-collection.c | 352 - mongolite-0.6/mongolite/src/mongoc/mongoc-config.h | 13 mongolite-0.6/mongolite/src/mongoc/mongoc-counters-private.h | 1 mongolite-0.6/mongolite/src/mongoc/mongoc-counters.c | 12 mongolite-0.6/mongolite/src/mongoc/mongoc-cursor-array.c | 16 mongolite-0.6/mongolite/src/mongoc/mongoc-cursor-cursorid-private.h | 9 mongolite-0.6/mongolite/src/mongoc/mongoc-cursor-cursorid.c | 15 mongolite-0.6/mongolite/src/mongoc/mongoc-cursor-private.h | 15 mongolite-0.6/mongolite/src/mongoc/mongoc-cursor-transform.c | 8 mongolite-0.6/mongolite/src/mongoc/mongoc-cursor.c | 386 - mongolite-0.6/mongolite/src/mongoc/mongoc-database.c | 47 mongolite-0.6/mongolite/src/mongoc/mongoc-error.h | 6 mongolite-0.6/mongolite/src/mongoc/mongoc-gridfs-file-list.c | 2 mongolite-0.6/mongolite/src/mongoc/mongoc-gridfs-file-page-private.h | 2 mongolite-0.6/mongolite/src/mongoc/mongoc-gridfs-file-page.c | 64 mongolite-0.6/mongolite/src/mongoc/mongoc-gridfs-file-private.h | 1 mongolite-0.6/mongolite/src/mongoc/mongoc-gridfs-file.c | 237 mongolite-0.6/mongolite/src/mongoc/mongoc-gridfs-file.h | 68 mongolite-0.6/mongolite/src/mongoc/mongoc-gridfs.c | 17 mongolite-0.6/mongolite/src/mongoc/mongoc-host-list.c |only mongolite-0.6/mongolite/src/mongoc/mongoc-host-list.h | 4 mongolite-0.6/mongolite/src/mongoc/mongoc-index.c | 41 mongolite-0.6/mongolite/src/mongoc/mongoc-index.h | 9 mongolite-0.6/mongolite/src/mongoc/mongoc-init.c | 10 mongolite-0.6/mongolite/src/mongoc/mongoc-iovec.h | 10 mongolite-0.6/mongolite/src/mongoc/mongoc-list.c | 12 mongolite-0.6/mongolite/src/mongoc/mongoc-log-private.h |only mongolite-0.6/mongolite/src/mongoc/mongoc-log.c | 163 mongolite-0.6/mongolite/src/mongoc/mongoc-matcher-op-private.h | 2 mongolite-0.6/mongolite/src/mongoc/mongoc-matcher-op.c | 45 mongolite-0.6/mongolite/src/mongoc/mongoc-matcher.c | 2 mongolite-0.6/mongolite/src/mongoc/mongoc-memcmp-private.h |only mongolite-0.6/mongolite/src/mongoc/mongoc-memcmp.c |only mongolite-0.6/mongolite/src/mongoc/mongoc-opcode-private.h |only mongolite-0.6/mongolite/src/mongoc/mongoc-opcode.c |only mongolite-0.6/mongolite/src/mongoc/mongoc-queue.c | 18 mongolite-0.6/mongolite/src/mongoc/mongoc-read-prefs-private.h | 21 mongolite-0.6/mongolite/src/mongoc/mongoc-read-prefs.c | 359 - mongolite-0.6/mongolite/src/mongoc/mongoc-rpc-private.h | 30 mongolite-0.6/mongolite/src/mongoc/mongoc-rpc.c | 229 mongolite-0.6/mongolite/src/mongoc/mongoc-sasl-private.h | 2 mongolite-0.6/mongolite/src/mongoc/mongoc-sasl.c | 32 mongolite-0.6/mongolite/src/mongoc/mongoc-scram.c | 19 mongolite-0.6/mongolite/src/mongoc/mongoc-server-description-private.h |only mongolite-0.6/mongolite/src/mongoc/mongoc-server-description.c |only mongolite-0.6/mongolite/src/mongoc/mongoc-server-description.h |only mongolite-0.6/mongolite/src/mongoc/mongoc-server-stream-private.h |only mongolite-0.6/mongolite/src/mongoc/mongoc-server-stream.c |only mongolite-0.6/mongolite/src/mongoc/mongoc-set-private.h |only mongolite-0.6/mongolite/src/mongoc/mongoc-set.c |only mongolite-0.6/mongolite/src/mongoc/mongoc-socket-private.h |only mongolite-0.6/mongolite/src/mongoc/mongoc-socket.c | 378 - mongolite-0.6/mongolite/src/mongoc/mongoc-socket.h | 9 mongolite-0.6/mongolite/src/mongoc/mongoc-ssl.c | 15 mongolite-0.6/mongolite/src/mongoc/mongoc-stream-buffered.c | 44 mongolite-0.6/mongolite/src/mongoc/mongoc-stream-file.c | 24 mongolite-0.6/mongolite/src/mongoc/mongoc-stream-gridfs.c | 14 mongolite-0.6/mongolite/src/mongoc/mongoc-stream-private.h | 11 mongolite-0.6/mongolite/src/mongoc/mongoc-stream-socket.c | 74 mongolite-0.6/mongolite/src/mongoc/mongoc-stream-tls.c | 162 mongolite-0.6/mongolite/src/mongoc/mongoc-stream-tls.h | 3 mongolite-0.6/mongolite/src/mongoc/mongoc-stream.c | 253 mongolite-0.6/mongolite/src/mongoc/mongoc-stream.h | 15 mongolite-0.6/mongolite/src/mongoc/mongoc-thread-private.h | 41 mongolite-0.6/mongolite/src/mongoc/mongoc-topology-description-private.h |only mongolite-0.6/mongolite/src/mongoc/mongoc-topology-description.c |only mongolite-0.6/mongolite/src/mongoc/mongoc-topology-private.h |only mongolite-0.6/mongolite/src/mongoc/mongoc-topology-scanner-private.h |only mongolite-0.6/mongolite/src/mongoc/mongoc-topology-scanner.c |only mongolite-0.6/mongolite/src/mongoc/mongoc-topology.c |only mongolite-0.6/mongolite/src/mongoc/mongoc-trace.h | 105 mongolite-0.6/mongolite/src/mongoc/mongoc-uri-private.h | 58 mongolite-0.6/mongolite/src/mongoc/mongoc-uri.c | 655 +- mongolite-0.6/mongolite/src/mongoc/mongoc-uri.h | 6 mongolite-0.6/mongolite/src/mongoc/mongoc-util-private.h | 24 mongolite-0.6/mongolite/src/mongoc/mongoc-util.c | 21 mongolite-0.6/mongolite/src/mongoc/mongoc-version-functions.c |only mongolite-0.6/mongolite/src/mongoc/mongoc-version-functions.h |only mongolite-0.6/mongolite/src/mongoc/mongoc-version.h | 9 mongolite-0.6/mongolite/src/mongoc/mongoc-write-command-private.h | 49 mongolite-0.6/mongolite/src/mongoc/mongoc-write-command.c | 969 +-- mongolite-0.6/mongolite/src/mongoc/mongoc-write-concern.c | 57 mongolite-0.6/mongolite/src/mongoc/mongoc-write-concern.h | 2 mongolite-0.6/mongolite/src/mongoc/mongoc.h | 1 mongolite-0.6/mongolite/src/mongoc/utlist.h |only mongolite-0.6/mongolite/src/tests/has_sasl_client_done.c | 3 mongolite-0.6/mongolite/src/win32/ipv6.c | 7 mongolite-0.6/mongolite/tools/winlibs.R | 2 147 files changed, 5825 insertions(+), 4932 deletions(-)
Title: Meta-Analysis using Structural Equation Modeling
Description: A collection of functions for conducting meta-analysis using a
structural equation modeling (SEM) approach via the 'OpenMx' package.
It also implements the two-stage SEM approach to conduct meta-analytic
structural equation modeling on correlation and covariance matrices.
Author: Mike W.-L. Cheung <mikewlcheung@nus.edu.sg>
Maintainer: Mike W.-L. Cheung <mikewlcheung@nus.edu.sg>
Diff between metaSEM versions 0.9.4 dated 2015-06-08 and 0.9.6 dated 2015-10-31
DESCRIPTION | 12 - MD5 | 94 ++++---- NAMESPACE | 10 NEWS | 27 ++ R/asyCov.R | 26 ++ R/hidden.R | 90 +------- R/meta2semPlot.R | 2 R/plot.meta.R | 6 R/summary.R | 64 ++++- R/tssem.R | 526 +++++++++++++++++++++++++------------------------ R/zzz.R | 6 data/Aloe14.rda |binary data/BCG.rda |binary data/Becker09.rda |binary data/Becker83.rda |binary data/Becker92.rda |binary data/Becker94.rda |binary data/Berkey98.rda |binary data/Bornmann07.rda |binary data/Cheung00.rda |binary data/Cheung09.rda |binary data/Cooper03.rda |binary data/Digman97.rda |binary data/HedgesOlkin85.rda |binary data/Hox02.rda |binary data/Hunter83.rda |binary data/Jaramillo05.rda |binary data/Mak09.rda |binary data/Norton13.rda |only data/Roorda11.rda |only data/issp05.rda |binary data/issp89.rda |binary data/wvs94a.rda |binary data/wvs94b.rda |binary inst/doc/metaSEM.pdf |binary man/Becker92.Rd | 2 man/Cheung00.Rd | 4 man/Hunter83.Rd | 4 man/Norton13.Rd |only man/Roorda11.Rd |only man/anova.Rd | 8 man/asyCov.Rd | 10 man/issp05.Rd | 1 man/metaSEM-package.Rd | 21 + man/plot.meta.Rd | 2 man/readData.Rd | 3 man/rerun.Rd | 9 man/tssem1.Rd | 40 ++- man/wls.Rd | 6 man/wvs94b.Rd | 4 50 files changed, 537 insertions(+), 440 deletions(-)
Title: Exact Test from the Combinations of Mutually Exclusive
Alterations (CoMEt) Algorithm
Description: An algorithm for identifying combinations of mutually exclusive alterations in cancer genomes. CoMEt represents the mutations in a set M of k genes with a 2^k dimensional contingency table, and then computes the tail probability of observing T(M) exclusive alterations using an exact statistical test.
Author: Max Leiserson [aut, cre],
Hsin-Ta Wu [aut],
Fabio Vandin [ctb],
Vivian Hsiao [ctb],
Benjamin Raphael [ctb]
Maintainer: Max Leiserson <mdml@cs.brown.edu>
Diff between cometExactTest versions 0.1.2 dated 2015-06-24 and 0.1.3 dated 2015-10-31
DESCRIPTION | 9 +-- MD5 | 10 ++- NAMESPACE | 6 +- R/cometexacttest.R | 146 +++++++++++++++++++++++++++++++++++++++++++++++++++-- man/comet.Rd | 20 ++++++- man/figures |only 6 files changed, 176 insertions(+), 15 deletions(-)
More information about cometExactTest at CRAN
Permanent link
Title: Extending R's Dendrogram Functionality
Description: Offers a set of functions for extending
dendrogram objects in R, letting you visualize and compare trees of
hierarchical clusterings. You can (1) Adjust a tree's graphical parameters
- the color, size, type, etc of its branches, nodes and labels. (2)
Visually and statistically compare different dendrograms to one another.
Author: Tal Galili [aut, cre, cph] (http://www.r-statistics.com),
Gavin Simpson [ctb],
Gregory Jefferis [ctb] (imported code from his dendroextras package),
Marco Gallotta [ctb] (a.k.a: marcog),
Johan Renaudie [ctb] (https://github.com/plannapus),
The R Core Team [ctb] (Thanks for the Infastructure, and code in the
examples),
Kurt Hornik [ctb],
Uwe Ligges [ctb],
Andrej-Nikolai Spiess [ctb],
Steve Horvath [ctb],
Peter Langfelder [ctb],
skullkey [ctb],
Mark Van Der Loo [ctb] (https://github.com/markvanderloo d3dendrogram),
Andrie de Vries [ctb] (ggdendro author),
Zuguang Gu [ctb] (circlize author),
Yoav Benjamini [ths]
Maintainer: Tal Galili <tal.galili@gmail.com>
Diff between dendextend versions 1.1.0 dated 2015-07-30 and 1.1.2 dated 2015-10-31
dendextend-1.1.0/dendextend/inst/doc/dendextend-tutorial.pdf |only dendextend-1.1.2/dendextend/ChangeLog | 71 ++ dendextend-1.1.2/dendextend/DESCRIPTION | 12 dendextend-1.1.2/dendextend/MD5 | 53 - dendextend-1.1.2/dendextend/NAMESPACE | 2 dendextend-1.1.2/dendextend/NEWS | 17 dendextend-1.1.2/dendextend/R/ggdend.R | 16 dendextend-1.1.2/dendextend/R/labels.R | 129 +--- dendextend-1.1.2/dendextend/R/prune.R | 5 dendextend-1.1.2/dendextend/R/rect.dendrogram.R | 28 - dendextend-1.1.2/dendextend/R/zzz.R | 2 dendextend-1.1.2/dendextend/README.md | 2 dendextend-1.1.2/dendextend/build/vignette.rds |binary dendextend-1.1.2/dendextend/inst/CITATION | 4 dendextend-1.1.2/dendextend/inst/doc/Cluster_Analysis.R | 44 - dendextend-1.1.2/dendextend/inst/doc/Cluster_Analysis.html | 175 +++--- dendextend-1.1.2/dendextend/inst/doc/FAQ.R | 18 dendextend-1.1.2/dendextend/inst/doc/FAQ.html | 78 +- dendextend-1.1.2/dendextend/inst/doc/Quick_Introduction.R | 2 dendextend-1.1.2/dendextend/inst/doc/Quick_Introduction.html | 51 + dendextend-1.1.2/dendextend/inst/doc/introduction.R | 94 +-- dendextend-1.1.2/dendextend/inst/doc/introduction.html | 304 +++++------ dendextend-1.1.2/dendextend/inst/tests/test-ggdend.R | 29 + dendextend-1.1.2/dendextend/inst/tests/test-labels-assign.R | 47 - dendextend-1.1.2/dendextend/man/ggdend.Rd | 8 dendextend-1.1.2/dendextend/man/identify.dendrogram.Rd | 6 dendextend-1.1.2/dendextend/man/labels-assign.Rd | 24 dendextend-1.1.2/dendextend/man/rect.dendrogram.Rd | 7 28 files changed, 709 insertions(+), 519 deletions(-)
Title: Laplace Deconvolution with Noisy Discrete Non-Equally Spaced
Observations on a Finite Time Interval
Description: Solves the problem of Laplace deconvolution with noisy discrete
non-equally spaced observations on a finite time interval based on expansions
of the convolution kernel, the unknown function and the observed signal over
Laguerre functions basis. It implements the methodology proposed in the paper
"Laplace deconvolution on the basis of time domain data and its application to
Dynamic Contrast Enhanced imaging" by F. Comte, C-A. Cuenod, M. Pensky and Y.
Rozenholc in ArXiv (http://arxiv.org/abs/1405.7107).
Author: Yves Rozenholc (University Paris Descartes), Marianna Pensky (University
of Central Florida)
Maintainer: Yves Rozenholc <yves.rozenholc@parisdescartes.fr>
Diff between LaplaceDeconv versions 1.0.2 dated 2015-10-29 and 1.0.3 dated 2015-10-31
DESCRIPTION | 18 +++++++++++++----- MD5 | 22 +++++++++++----------- NAMESPACE | 7 +------ R/LagLaplaceDeconvolution.R | 5 +++++ data/EX_DCEMRI_t0.rda |binary data/EX_DCEMRI_t1.rda |binary man/BuildLaguerreSystem.Rd | 14 +++++++------- man/EX_DCEMRI_t0.rda-EX_DCEMRI_t1.rda.Rd | 2 +- man/LagLaplDeconv.Rd | 4 ++-- man/LaguerreLaplaceConvolution.Rd | 12 ++++++------ man/LaplaceConvolution.Rd | 10 +++++----- man/MakeLaguerreMatrix.Rd | 6 +++--- 12 files changed, 54 insertions(+), 46 deletions(-)
Title: Regression Estimation Based on the Compound Covariate Method
Under the Cox Proportional Hazard Model
Description: Calculate regression coefficients and their standard deviations under the Cox proportional hazard model with a large number of covariates. A shrinkage type estimation based on the compound covariate method (Emura, Chen & Chen, 2012 PLoS ONE) and a univariate gene selection method under dependent censoring (Emura & Chen, 2014 Statistical Methods in Medical Research) are implemented. Algorithms for simulating gene expressions in these references are also given.
Author: Takeshi Emura & Yi-Hau Chen
Maintainer: Takeshi Emura <takeshiemura@gmail.com>
Diff between compound.Cox versions 1.4 dated 2014-04-13 and 2.0 dated 2015-10-31
DESCRIPTION | 16 ++++++++-------- MD5 | 16 ++++++++++------ NAMESPACE | 4 +++- R/X.pathway.R |only R/X.tag.R |only man/X.pathway.Rd |only man/X.tag.Rd |only man/cindex.CV.Rd | 35 ++++++++++++++++++++--------------- man/compound.Cox-package.Rd | 19 ++++++++++--------- man/dependCox.reg.CV.Rd | 4 ++-- man/dependCox.reg.Rd | 9 ++++++--- 11 files changed, 59 insertions(+), 44 deletions(-)
Title: Simple Network of Workstations
Description: Support for simple parallel computing in R.
Author: Luke Tierney, A. J. Rossini, Na Li, H. Sevcikova
Maintainer: Luke Tierney <luke-tierney@uiowa.edu>
Diff between snow versions 0.3-13 dated 2013-09-27 and 0.4-1 dated 2015-10-31
snow-0.3-13/snow/R/pvm.R |only snow-0.4-1/snow/DESCRIPTION | 12 +-- snow-0.4-1/snow/MD5 | 21 +++--- snow-0.4-1/snow/NAMESPACE | 29 +++++++++ snow-0.4-1/snow/R/mpi.R | 44 ++++++------- snow-0.4-1/snow/R/nws.R | 28 ++++---- snow-0.4-1/snow/R/snow.R | 107 ++++++++++++++++++---------------- snow-0.4-1/snow/README | 40 +++++------- snow-0.4-1/snow/inst/RMPISNOW | 2 snow-0.4-1/snow/man/snow-internal.Rd | 26 ++++---- snow-0.4-1/snow/man/snow-rand.Rd | 1 snow-0.4-1/snow/man/snow-startstop.Rd | 20 +++--- 12 files changed, 185 insertions(+), 145 deletions(-)
Title: Solvers for Large Scale Eigenvalue and SVD Problems
Description: An R wrapper of the 'ARPACK' library
<http://www.caam.rice.edu/software/ARPACK/> to solve large scale
eigenvalue/vector problems. It is typically used to compute a few
eigenvalues/vectors of an n by n matrix, e.g., the k largest eigenvalues,
which is usually more efficient than eigen() if k << n. This package
provides the 'eigs()' function which does the similar job as in 'Matlab',
'Octave', 'Python SciPy' and 'Julia'. It also provides the 'svds()' function
to calculate the largest k singular values and corresponding
singular vectors of a real matrix. Matrices can be given in either dense
or sparse form.
Author: Yixuan Qiu, Jiali Mei and authors of the ARPACK library. See file
AUTHORS for details.
Maintainer: Yixuan Qiu <yixuan.qiu@cos.name>
Diff between rARPACK versions 0.7-0 dated 2014-11-02 and 0.8-0 dated 2015-10-31
rARPACK-0.7-0/rARPACK/AUTHORS |only rARPACK-0.7-0/rARPACK/COPYRIGHTS |only rARPACK-0.7-0/rARPACK/NEWS |only rARPACK-0.7-0/rARPACK/R/25_eigs_function.R |only rARPACK-0.7-0/rARPACK/inst/LICENSE |only rARPACK-0.7-0/rARPACK/src/ARPACK |only rARPACK-0.7-0/rARPACK/src/ARPACK.h |only rARPACK-0.7-0/rARPACK/src/Eigs.cpp |only rARPACK-0.7-0/rARPACK/src/Eigs.h |only rARPACK-0.7-0/rARPACK/src/EigsGen.cpp |only rARPACK-0.7-0/rARPACK/src/EigsGen.h |only rARPACK-0.7-0/rARPACK/src/EigsSym.cpp |only rARPACK-0.7-0/rARPACK/src/EigsSym.h |only rARPACK-0.7-0/rARPACK/src/MatOp.h |only rARPACK-0.7-0/rARPACK/src/MatOp_dgeMatrix.h |only rARPACK-0.7-0/rARPACK/src/MatOp_dsyMatrix.h |only rARPACK-0.7-0/rARPACK/src/MatOp_function.cpp |only rARPACK-0.7-0/rARPACK/src/MatOp_function.h |only rARPACK-0.7-0/rARPACK/src/MatOp_matrix.cpp |only rARPACK-0.7-0/rARPACK/src/MatOp_matrix.h |only rARPACK-0.7-0/rARPACK/src/MatOp_sparseMatrix.h |only rARPACK-0.7-0/rARPACK/src/MatOp_symmatrix.cpp |only rARPACK-0.7-0/rARPACK/src/MatOp_symmatrix.h |only rARPACK-0.7-0/rARPACK/src/MatTypes.h |only rARPACK-0.7-0/rARPACK/src/SVDsGen.cpp |only rARPACK-0.7-0/rARPACK/src/SVDsGen.h |only rARPACK-0.7-0/rARPACK/src/SVDsSym.cpp |only rARPACK-0.7-0/rARPACK/src/SVDsSym.h |only rARPACK-0.7-0/rARPACK/src/eigs_funs.cpp |only rARPACK-0.7-0/rARPACK/src/message.cpp |only rARPACK-0.7-0/rARPACK/src/rARPACK-win.def |only rARPACK-0.7-0/rARPACK/src/svds_funs.cpp |only rARPACK-0.7-0/rARPACK/src/wrapper.f |only rARPACK-0.8-0/rARPACK/DESCRIPTION | 22 +- rARPACK-0.8-0/rARPACK/LICENSE | 2 rARPACK-0.8-0/rARPACK/MD5 | 194 +++++++------------------ rARPACK-0.8-0/rARPACK/NAMESPACE | 6 rARPACK-0.8-0/rARPACK/R/00_eigs.R | 112 ++++++++++---- rARPACK-0.8-0/rARPACK/R/10_eigs_real_gen.R | 104 ++++++------- rARPACK-0.8-0/rARPACK/R/20_eigs_real_sym.R | 62 ++++--- rARPACK-0.8-0/rARPACK/R/30_svds.R | 22 +- rARPACK-0.8-0/rARPACK/R/40_svds_real_gen.R | 32 ++-- rARPACK-0.8-0/rARPACK/R/50_svds_real_sym.R | 28 ++- rARPACK-0.8-0/rARPACK/inst/AUTHORS | 22 ++ rARPACK-0.8-0/rARPACK/inst/COPYRIGHTS | 5 rARPACK-0.8-0/rARPACK/inst/NEWS.Rd |only rARPACK-0.8-0/rARPACK/inst/include |only rARPACK-0.8-0/rARPACK/man/eigs.Rd | 30 ++- rARPACK-0.8-0/rARPACK/man/svds.Rd | 7 rARPACK-0.8-0/rARPACK/src/Makevars | 13 - rARPACK-0.8-0/rARPACK/src/Makevars.win | 13 - rARPACK-0.8-0/rARPACK/src/c_interface.c |only rARPACK-0.8-0/rARPACK/src/c_interface.h |only rARPACK-0.8-0/rARPACK/src/eigs_gen.cpp |only rARPACK-0.8-0/rARPACK/src/eigs_sym.cpp |only rARPACK-0.8-0/rARPACK/src/matops.cpp |only rARPACK-0.8-0/rARPACK/src/matops.h |only rARPACK-0.8-0/rARPACK/src/svds.cpp |only 58 files changed, 341 insertions(+), 333 deletions(-)
Title: Mixed GAM Computation Vehicle with GCV/AIC/REML Smoothness
Estimation
Description: GAMs, GAMMs and other generalized ridge regression with
multiple smoothing parameter estimation by GCV, REML or UBRE/AIC.
Includes a gam() function, a wide variety of smoothers, JAGS
support and distributions beyond the exponential family.
Author: Simon Wood <simon.wood@r-project.org>
Maintainer: Simon Wood <simon.wood@r-project.org>
Diff between mgcv versions 1.8-8 dated 2015-10-24 and 1.8-9 dated 2015-10-31
ChangeLog | 6 ++++++ DESCRIPTION | 6 +++--- MD5 | 16 ++++++++-------- man/gamm.Rd | 18 +++++++++++++++++- man/mgcv-parallel.Rd | 10 +++++++++- man/smooth.construct.gp.smooth.spec.Rd | 6 +++--- src/discrete.c | 33 +++++++++------------------------ src/gdi.c | 2 +- src/mat.c | 2 +- 9 files changed, 57 insertions(+), 42 deletions(-)
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