Title: Easily Harvest (Scrape) Web Pages
Description: Wrappers around the 'xml2' and 'httr' packages to make it easy to
download, then manipulate, HTML and XML.
Author: Hadley Wickham [aut, cre],
RStudion [cph]
Maintainer: Hadley Wickham <hadley@rstudio.com>
Diff between rvest versions 0.3.0 dated 2015-09-22 and 0.3.1 dated 2015-11-11
DESCRIPTION | 7 +++--- MD5 | 50 +++++++++++++++++++++---------------------- NAMESPACE | 2 - R/encoding.R | 2 - R/form.R | 8 +++--- R/session.R | 2 - R/table.R | 2 - inst/doc/selectorgadget.html | 4 +-- man/encoding.Rd | 4 +-- man/google_form.Rd | 2 - man/html.Rd | 2 - man/html_form.Rd | 2 - man/html_nodes.Rd | 4 +-- man/html_session.Rd | 2 - man/html_table.Rd | 4 +-- man/html_tag.Rd | 2 - man/html_text.Rd | 2 - man/jump_to.Rd | 2 - man/minimal_html.Rd | 2 - man/pipe.Rd | 2 - man/pluck.Rd | 2 - man/session_history.Rd | 2 - man/set_values.Rd | 2 - man/submit_form.Rd | 2 - man/xml.Rd | 2 - tests/testthat/test-forms.R | 11 +++++++++ 26 files changed, 70 insertions(+), 58 deletions(-)
Title: (Robust) Canonical Correlation Analysis via Projection Pursuit
Description: Canonical correlation analysis and maximum correlation via
projection pursuit, as well as fast implementations of correlation
estimators, with a focus on robust and nonparametric methods.
Author: Andreas Alfons [aut, cre],
David Simcha [ctb]
Maintainer: Andreas Alfons <alfons@ese.eur.nl>
Diff between ccaPP versions 0.3.0 dated 2013-11-01 and 0.3.1 dated 2015-11-11
DESCRIPTION | 18 +-- MD5 | 45 ++++---- NAMESPACE | 6 - NEWS | 18 ++- R/cca.R | 38 ++---- R/cor.R | 11 - R/fastMAD.R | 5 R/fastMedian.R | 3 R/maxCor.R | 32 +---- R/permTest.R | 20 +-- R/print.R | 10 - build |only data |only man/ccaGrid.Rd | 282 ++++++++++++++++++++++----------------------------- man/ccaPP-package.Rd | 45 +------- man/ccaProj.Rd | 180 ++++++++++++++------------------ man/corFunctions.Rd | 116 +++++++++----------- man/diabetes.Rd |only man/fastMAD.Rd | 30 ++--- man/fastMedian.Rd | 17 +-- man/maxCorGrid.Rd | 236 ++++++++++++++++++------------------------ man/maxCorProj.Rd | 139 +++++++++++-------------- man/permTest.Rd | 118 +++++++++------------ src/Makevars.win | 6 - src/cca.cpp | 2 25 files changed, 602 insertions(+), 775 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2013-12-11 0.1-2
2013-09-09 0.1-1
2012-12-26 0.0.1
Title: Wrap Around Time Series Graphics
Description: Wrap-around Time Series (WATS) plots for interrupted time series
designs with seasonal patterns.
Author: Will Beasley [aut, cre], Joe Rodgers [aut], Matthew Schuelke [ctb],
Ronnie Coleman [ctb], Mark Joseph Lachowicz [ctb]
Maintainer: Will Beasley <wibeasley@hotmail.com>
Diff between Wats versions 0.10.1 dated 2015-08-26 and 0.10.3 dated 2015-11-11
DESCRIPTION | 13 +- MD5 | 60 ++++----- NAMESPACE | 2 NEWS | 10 + R/AnnotateData.R | 1 R/CartesianPeriodic.R | 19 +-- R/CartesianRolling.R | 3 R/PolarPeriodic.R | 5 R/PolarizeCartesian.R | 1 README.md | 6 inst/doc/MbrFigures.html | 60 ++++----- inst/doc/OkFertilityWithIntercensalEstimates.html | 63 ++++------ man/AnnotateData.Rd | 2 man/AugmentCycleData.Rd | 5 man/CartesianPeriodic.Rd | 2 man/CartesianRolling.Rd | 12 - man/CountyMonthBirthRate.Rd | 46 +++---- man/PolarPeriodic.Rd | 40 +++--- man/PolarizeCartesian.Rd | 20 +-- man/Wats-package.Rd | 36 ++--- vignettes/figure_mbr_rmd/Figure2IndividualBasic-1.png |binary vignettes/figure_mbr_rmd/Figure2Stylized-1.png |binary vignettes/figure_mbr_rmd/Figure4Basic-1.png |binary vignettes/figure_mbr_rmd/Figure4Stylized-1.png |binary vignettes/figure_mbr_rmd/Figure6-1.png |binary vignettes/figure_mbr_rmd/Figure7-1.png |binary vignettes/figure_mbr_rmd/Figure7AllCounties-1.png |binary vignettes/figure_mbr_rmd/Figure8-1.png |binary vignettes/figure_okc_fertility_intercensal_rmd/CartesianPeriodic-1.png |binary vignettes/figure_okc_fertility_intercensal_rmd/CartesianRolling-1.png |binary vignettes/figure_okc_fertility_intercensal_rmd/PolarPeriodic-1.png |binary 31 files changed, 199 insertions(+), 207 deletions(-)
Title: n-Gram Text Regression, aka Concise Comparative Summarization
Description: Function for sparse regression on raw text, regressing a labeling
vector onto a feature space consisting of all possible phrases.
Author: Luke Miratrix
Maintainer: Luke Miratrix <lmiratrix@stat.harvard.edu>
Diff between textreg versions 0.1.2 dated 2015-02-06 and 0.1.3 dated 2015-11-11
textreg-0.1.2/textreg/inst/testthat |only textreg-0.1.2/textreg/src/RcppExports.cpp |only textreg-0.1.2/textreg/vignettes/bathtub_vignette-concordance.tex |only textreg-0.1.2/textreg/vignettes/figure |only textreg-0.1.3/textreg/DESCRIPTION | 12 textreg-0.1.3/textreg/MD5 | 134 - textreg-0.1.3/textreg/NAMESPACE | 8 textreg-0.1.3/textreg/R/cross_validation_code.R | 330 ++-- textreg-0.1.3/textreg/R/make_word_lists.R | 226 ++- textreg-0.1.3/textreg/R/stempp.R | 2 textreg-0.1.3/textreg/R/text_searching.R | 3 textreg-0.1.3/textreg/R/textreg.R | 651 ++++---- textreg-0.1.3/textreg/R/vizualize_phrases.R | 2 textreg-0.1.3/textreg/build/vignette.rds |binary textreg-0.1.3/textreg/data/bathtub.RData |binary textreg-0.1.3/textreg/data/dirtyBathtub.RData |binary textreg-0.1.3/textreg/data/testCorpora.RData |binary textreg-0.1.3/textreg/inst/doc/bathtub_vignette.Rnw | 732 ++++------ textreg-0.1.3/textreg/man/bathtub.Rd | 3 textreg-0.1.3/textreg/man/build.corpus.Rd | 3 textreg-0.1.3/textreg/man/calc.loss.Rd | 3 textreg-0.1.3/textreg/man/clean.text.Rd | 3 textreg-0.1.3/textreg/man/cluster.phrases.Rd | 3 textreg-0.1.3/textreg/man/convert.tm.to.character.Rd | 3 textreg-0.1.3/textreg/man/cpp_build.corpus.Rd | 3 textreg-0.1.3/textreg/man/cpp_textreg.Rd | 3 textreg-0.1.3/textreg/man/dirtyBathtub.Rd | 3 textreg-0.1.3/textreg/man/find.CV.C.Rd | 7 textreg-0.1.3/textreg/man/find.threshold.C.Rd | 11 textreg-0.1.3/textreg/man/grab.fragments.Rd | 3 textreg-0.1.3/textreg/man/is.fragment.sample.Rd | 3 textreg-0.1.3/textreg/man/is.textreg.corpus.Rd | 3 textreg-0.1.3/textreg/man/is.textreg.result.Rd | 3 textreg-0.1.3/textreg/man/list.table.chart.Rd | 14 textreg-0.1.3/textreg/man/make.CV.chart.Rd | 16 textreg-0.1.3/textreg/man/make.appearance.matrix.Rd | 3 textreg-0.1.3/textreg/man/make.count.table.Rd | 3 textreg-0.1.3/textreg/man/make.list.table.Rd | 6 textreg-0.1.3/textreg/man/make.path.matrix.Rd | 3 textreg-0.1.3/textreg/man/make.phrase.correlation.chart.Rd | 3 textreg-0.1.3/textreg/man/make.phrase.matrix.Rd | 3 textreg-0.1.3/textreg/man/make.similarity.matrix.Rd | 3 textreg-0.1.3/textreg/man/make_search_phrases.Rd | 3 textreg-0.1.3/textreg/man/path.matrix.chart.Rd | 3 textreg-0.1.3/textreg/man/phrase.count.Rd | 3 textreg-0.1.3/textreg/man/phrase.matrix.Rd | 3 textreg-0.1.3/textreg/man/plot.textreg.result.Rd | 3 textreg-0.1.3/textreg/man/predict.textreg.result.Rd | 3 textreg-0.1.3/textreg/man/print.fragment.sample.Rd | 3 textreg-0.1.3/textreg/man/print.textreg.corpus.Rd | 3 textreg-0.1.3/textreg/man/print.textreg.result.Rd | 3 textreg-0.1.3/textreg/man/reformat.textreg.model.Rd | 3 textreg-0.1.3/textreg/man/sample.fragments.Rd | 3 textreg-0.1.3/textreg/man/save.corpus.to.files.Rd | 3 textreg-0.1.3/textreg/man/stem.corpus.Rd | 3 textreg-0.1.3/textreg/man/testCorpora.Rd | 3 textreg-0.1.3/textreg/man/textreg-package.Rd | 3 textreg-0.1.3/textreg/man/textreg.Rd | 12 textreg-0.1.3/textreg/man/tm_gregexpr.Rd | 3 textreg-0.1.3/textreg/src/textreg.cpp | 20 60 files changed, 1244 insertions(+), 1047 deletions(-)
Title: Qt-Based Painting Infrastructure
Description: Low-level interface to functionality in Qt for efficiently drawing
dynamic graphics and handling basic user input.
Author: Michael Lawrence, Deepayan Sarkar
Maintainer: Michael Lawrence <michafla@gene.com>
Diff between qtpaint versions 0.9.0 dated 2012-03-03 and 0.9.1 dated 2015-11-11
qtpaint-0.9.0/qtpaint/.gitignore |only qtpaint-0.9.0/qtpaint/NOTES |only qtpaint-0.9.0/qtpaint/inst/profiling/.Rhistory |only qtpaint-0.9.0/qtpaint/kdebindings |only qtpaint-0.9.0/qtpaint/vignettes/.gitignore |only qtpaint-0.9.1/qtpaint/DESCRIPTION | 17 ++--- qtpaint-0.9.1/qtpaint/MD5 | 45 +++++++------- qtpaint-0.9.1/qtpaint/NAMESPACE | 4 + qtpaint-0.9.1/qtpaint/R/layer.R | 45 +++++++++++++- qtpaint-0.9.1/qtpaint/build |only qtpaint-0.9.1/qtpaint/demo/canvas.R | 76 ++++++++++++------------- qtpaint-0.9.1/qtpaint/inst/NOTES |only qtpaint-0.9.1/qtpaint/inst/doc/intro.R |only qtpaint-0.9.1/qtpaint/inst/doc/intro.pdf |binary qtpaint-0.9.1/qtpaint/man/qlayer.Rd | 27 ++++++-- qtpaint-0.9.1/qtpaint/src/CMakeLists.txt | 47 ++++++++++----- qtpaint-0.9.1/qtpaint/src/Makefile | 26 -------- qtpaint-0.9.1/qtpaint/src/Makefile.common |only qtpaint-0.9.1/qtpaint/src/Makefile.win | 32 +--------- qtpaint-0.9.1/qtpaint/src/OpenGLPainter.cpp | 22 ++++++- qtpaint-0.9.1/qtpaint/src/PainterWrappers.cpp | 4 - qtpaint-0.9.1/qtpaint/src/PlotView.cpp | 4 - qtpaint-0.9.1/qtpaint/src/PlotView.hpp | 2 qtpaint-0.9.1/qtpaint/src/TestWidget.cpp | 14 ++-- qtpaint-0.9.1/qtpaint/src/kdebindings |only 25 files changed, 206 insertions(+), 159 deletions(-)
Title: A Framework for Coalescent Simulation
Description: Coalescent simulators can rapidly simulate biological sequences
evolving according to a given model of evolution.
This package allows to specify such models, transparently calls a suitable
simulator, parses the results and calculates additional summary statistics.
It supports the simulators 'ms', 'msms' and 'scrm' and can simulate
finite-sites mutation models by combining the simulators with the program
'seq-gen'.
Author: Paul Staab [aut, cre, cph],
Dirk Metzler [ths]
Maintainer: Paul Staab <develop@paulstaab.de>
Diff between coala versions 0.1.1 dated 2015-07-17 and 0.2.0 dated 2015-11-11
coala-0.1.1/coala/NEWS |only coala-0.1.1/coala/R/sumstat_nsl.R |only coala-0.1.1/coala/R/sumstat_omegaprime.R |only coala-0.1.1/coala/inst/doc/abc.R |only coala-0.1.1/coala/inst/doc/abc.Rmd |only coala-0.1.1/coala/inst/doc/abc.html |only coala-0.1.1/coala/inst/doc/installation.Rmd |only coala-0.1.1/coala/inst/doc/installation.html |only coala-0.1.1/coala/inst/doc/introduction.R |only coala-0.1.1/coala/inst/doc/introduction.Rmd |only coala-0.1.1/coala/inst/doc/introduction.html |only coala-0.1.1/coala/man/sumstat_nSL.Rd |only coala-0.1.1/coala/man/sumstat_omegaprime.Rd |only coala-0.1.1/coala/src/seg_sites.h |only coala-0.1.1/coala/src/stat_omegaprime.cpp |only coala-0.1.1/coala/tests/testthat/test-sumstat-nSL.R |only coala-0.1.1/coala/tests/testthat/test-sumstat-omegaprime.R |only coala-0.1.1/coala/vignettes/abc.Rmd |only coala-0.1.1/coala/vignettes/installation.Rmd |only coala-0.1.1/coala/vignettes/introduction.Rmd |only coala-0.2.0/coala/DESCRIPTION | 28 coala-0.2.0/coala/MD5 | 250 +++--- coala-0.2.0/coala/NAMESPACE | 13 coala-0.2.0/coala/NEWS.md |only coala-0.2.0/coala/R/RcppExports.R | 46 - coala-0.2.0/coala/R/feature.R | 8 coala-0.2.0/coala/R/feature_growth.R | 7 coala-0.2.0/coala/R/feature_mutation.R | 36 coala-0.2.0/coala/R/feature_outgroup.R | 7 coala-0.2.0/coala/R/feature_sample.R | 39 - coala-0.2.0/coala/R/feature_size_change.R | 25 coala-0.2.0/coala/R/feature_unphased.R | 39 - coala-0.2.0/coala/R/locus.R | 2 coala-0.2.0/coala/R/model.R | 35 coala-0.2.0/coala/R/model_build.R | 3 coala-0.2.0/coala/R/model_getters.R | 35 coala-0.2.0/coala/R/model_simulate.R | 17 coala-0.2.0/coala/R/par_zero_inflation.R | 23 coala-0.2.0/coala/R/parameter.R | 3 coala-0.2.0/coala/R/search_executable.R | 14 coala-0.2.0/coala/R/segsites.R |only coala-0.2.0/coala/R/simulator_class.R | 13 coala-0.2.0/coala/R/simulator_scrm.R | 4 coala-0.2.0/coala/R/simulator_seqgen.R | 91 +- coala-0.2.0/coala/R/sumstat.R | 37 - coala-0.2.0/coala/R/sumstat_dna.R | 19 coala-0.2.0/coala/R/sumstat_file.R | 4 coala-0.2.0/coala/R/sumstat_four_gamete.R | 12 coala-0.2.0/coala/R/sumstat_ihh.R | 156 ++-- coala-0.2.0/coala/R/sumstat_jsfs.R | 33 coala-0.2.0/coala/R/sumstat_mcmf.R |only coala-0.2.0/coala/R/sumstat_nucleotide_div.R | 9 coala-0.2.0/coala/R/sumstat_omega.R |only coala-0.2.0/coala/R/sumstat_seg_sites.R | 23 coala-0.2.0/coala/R/sumstat_sfs.R | 15 coala-0.2.0/coala/R/sumstat_tajimas_d.R | 9 coala-0.2.0/coala/R/sumstat_trees.R | 4 coala-0.2.0/coala/build/vignette.rds |binary coala-0.2.0/coala/inst/doc/coala-abc.R |only coala-0.2.0/coala/inst/doc/coala-abc.Rmd |only coala-0.2.0/coala/inst/doc/coala-abc.html |only coala-0.2.0/coala/inst/doc/coala-extend.R |only coala-0.2.0/coala/inst/doc/coala-extend.Rmd |only coala-0.2.0/coala/inst/doc/coala-extend.html |only coala-0.2.0/coala/inst/doc/coala-install.Rmd |only coala-0.2.0/coala/inst/doc/coala-install.html |only coala-0.2.0/coala/inst/doc/coala-intro.R |only coala-0.2.0/coala/inst/doc/coala-intro.Rmd |only coala-0.2.0/coala/inst/doc/coala-intro.html |only coala-0.2.0/coala/inst/include |only coala-0.2.0/coala/man/activate_ms.Rd | 2 coala-0.2.0/coala/man/activate_msms.Rd | 2 coala-0.2.0/coala/man/activate_seqgen.Rd | 2 coala-0.2.0/coala/man/calc_jsfs.Rd | 6 coala-0.2.0/coala/man/check_model.Rd | 2 coala-0.2.0/coala/man/coal_model.Rd | 13 coala-0.2.0/coala/man/coala.Rd | 2 coala-0.2.0/coala/man/conv_to_ms_arg.Rd | 2 coala-0.2.0/coala/man/feat_growth.Rd | 9 coala-0.2.0/coala/man/feat_migration.Rd | 2 coala-0.2.0/coala/man/feat_mutation.Rd | 8 coala-0.2.0/coala/man/feat_outgroup.Rd | 2 coala-0.2.0/coala/man/feat_pop_merge.Rd | 2 coala-0.2.0/coala/man/feat_recombination.Rd | 2 coala-0.2.0/coala/man/feat_sample.Rd | 9 coala-0.2.0/coala/man/feat_selection.Rd | 3 coala-0.2.0/coala/man/feat_size_change.Rd | 10 coala-0.2.0/coala/man/feat_unphased.Rd | 9 coala-0.2.0/coala/man/get_features.Rd | 15 coala-0.2.0/coala/man/list_simulators.Rd | 2 coala-0.2.0/coala/man/locus_single.Rd | 4 coala-0.2.0/coala/man/locus_trio.Rd | 2 coala-0.2.0/coala/man/par_expr.Rd | 18 coala-0.2.0/coala/man/par_variation.Rd | 2 coala-0.2.0/coala/man/par_zero_inflation.Rd | 11 coala-0.2.0/coala/man/plus-.coalmodel.Rd | 2 coala-0.2.0/coala/man/scale_model.Rd | 2 coala-0.2.0/coala/man/search_executable.Rd | 2 coala-0.2.0/coala/man/simulate.coalmodel.Rd | 10 coala-0.2.0/coala/man/sumstat_class.Rd |only coala-0.2.0/coala/man/sumstat_dna.Rd | 8 coala-0.2.0/coala/man/sumstat_file.Rd | 2 coala-0.2.0/coala/man/sumstat_four_gamete.Rd | 9 coala-0.2.0/coala/man/sumstat_ihh.Rd | 70 + coala-0.2.0/coala/man/sumstat_jsfs.Rd | 13 coala-0.2.0/coala/man/sumstat_mcmf.Rd |only coala-0.2.0/coala/man/sumstat_nucleotide_div.Rd | 9 coala-0.2.0/coala/man/sumstat_omega.Rd |only coala-0.2.0/coala/man/sumstat_seg_sites.Rd | 8 coala-0.2.0/coala/man/sumstat_sfs.Rd | 8 coala-0.2.0/coala/man/sumstat_tajimas_d.Rd | 9 coala-0.2.0/coala/man/sumstat_trees.Rd | 2 coala-0.2.0/coala/src/RcppExports.cpp | 130 ++- coala-0.2.0/coala/src/parse_ms_output.cpp | 21 coala-0.2.0/coala/src/parse_seqgen_output.cpp | 259 ++----- coala-0.2.0/coala/src/seg_sites.cpp |only coala-0.2.0/coala/src/stat_fpc.cpp | 21 coala-0.2.0/coala/src/stat_jsfs.cpp | 25 coala-0.2.0/coala/src/stat_mcmf.cpp |only coala-0.2.0/coala/src/stat_nucleotide_div.cpp | 5 coala-0.2.0/coala/src/unphase_segsites.cpp | 52 - coala-0.2.0/coala/tests/testthat/test-feature-mutation.R | 32 coala-0.2.0/coala/tests/testthat/test-feature-outgroup.R | 2 coala-0.2.0/coala/tests/testthat/test-feature-samples.R | 8 coala-0.2.0/coala/tests/testthat/test-feature-size-change.R | 23 coala-0.2.0/coala/tests/testthat/test-feature-unphased.R | 81 +- coala-0.2.0/coala/tests/testthat/test-locus.R | 7 coala-0.2.0/coala/tests/testthat/test-model-class.R | 50 - coala-0.2.0/coala/tests/testthat/test-model-simulation.R | 17 coala-0.2.0/coala/tests/testthat/test-parameter-zero-inflation.R | 23 coala-0.2.0/coala/tests/testthat/test-search-executables.R |only coala-0.2.0/coala/tests/testthat/test-segsites-class.R |only coala-0.2.0/coala/tests/testthat/test-simulator-class.R | 2 coala-0.2.0/coala/tests/testthat/test-simulator-ms.R | 47 - coala-0.2.0/coala/tests/testthat/test-simulator-msms.R | 54 + coala-0.2.0/coala/tests/testthat/test-simulator-scrm.R | 17 coala-0.2.0/coala/tests/testthat/test-simulator-seqgen.R | 367 ++++------ coala-0.2.0/coala/tests/testthat/test-sumstat-class.R | 44 - coala-0.2.0/coala/tests/testthat/test-sumstat-dna.R | 53 - coala-0.2.0/coala/tests/testthat/test-sumstat-fpc.R | 62 - coala-0.2.0/coala/tests/testthat/test-sumstat-iHH.R | 156 +++- coala-0.2.0/coala/tests/testthat/test-sumstat-jsfs.R | 194 +++-- coala-0.2.0/coala/tests/testthat/test-sumstat-mcmf.R |only coala-0.2.0/coala/tests/testthat/test-sumstat-omega.R |only coala-0.2.0/coala/tests/testthat/test-sumstat-segsites.R | 28 coala-0.2.0/coala/tests/testthat/test-sumstat-sfs.R | 47 - coala-0.2.0/coala/tests/testthat/test-travis-setup.R |only coala-0.2.0/coala/vignettes/coala-abc.Rmd |only coala-0.2.0/coala/vignettes/coala-extend.Rmd |only coala-0.2.0/coala/vignettes/coala-install.Rmd |only coala-0.2.0/coala/vignettes/coala-intro.Rmd |only 151 files changed, 1872 insertions(+), 1309 deletions(-)
Title: R Client for the MTurk Requester API
Description: Provides programmatic access to the Amazon Mechanical Turk (MTurk) Requester API.
Author: Thomas J. Leeper [aut, cre],
Solomon Messing [ctb],
Sean Murphy [ctb],
Jonathan Chang [ctb]
Maintainer: Thomas J. Leeper <thosjleeper@gmail.com>
Diff between MTurkR versions 0.6.5.1 dated 2015-05-23 and 0.6.17 dated 2015-11-11
MTurkR-0.6.17/MTurkR/DESCRIPTION | 10 - MTurkR-0.6.17/MTurkR/MD5 | 102 +++++------ MTurkR-0.6.17/MTurkR/NAMESPACE | 14 + MTurkR-0.6.17/MTurkR/NEWS | 27 ++ MTurkR-0.6.17/MTurkR/R/ApproveAllAssignments.R | 2 MTurkR-0.6.17/MTurkR/R/ApproveAssignment.R | 4 MTurkR-0.6.17/MTurkR/R/BlockWorker.R | 2 MTurkR-0.6.17/MTurkR/R/BulkCreate.R | 8 MTurkR-0.6.17/MTurkR/R/ContactWorker.R | 16 - MTurkR-0.6.17/MTurkR/R/CreateHIT.R | 17 - MTurkR-0.6.17/MTurkR/R/CreateQualificationType.R | 10 - MTurkR-0.6.17/MTurkR/R/DisableHIT.R | 5 MTurkR-0.6.17/MTurkR/R/ExtendHIT.R | 4 MTurkR-0.6.17/MTurkR/R/GenerateAnswerKey.R | 2 MTurkR-0.6.17/MTurkR/R/GenerateExternalQuestion.R | 2 MTurkR-0.6.17/MTurkR/R/GenerateHITLayoutParameter.R | 2 MTurkR-0.6.17/MTurkR/R/GenerateHTMLQuestion.R | 2 MTurkR-0.6.17/MTurkR/R/GenerateQualificationRequirement.R | 10 - MTurkR-0.6.17/MTurkR/R/GenerateReviewPolicy.R | 4 MTurkR-0.6.17/MTurkR/R/GetAssignment.R | 5 MTurkR-0.6.17/MTurkR/R/GetFileUpload.R | 4 MTurkR-0.6.17/MTurkR/R/GetHIT.R | 9 MTurkR-0.6.17/MTurkR/R/GetHITsForQualificationType.R | 3 MTurkR-0.6.17/MTurkR/R/GetReviewResultsForHIT.R | 24 +- MTurkR-0.6.17/MTurkR/R/GetReviewableHITs.R | 2 MTurkR-0.6.17/MTurkR/R/GrantBonus.R | 6 MTurkR-0.6.17/MTurkR/R/HITStatus.R | 40 ++-- MTurkR-0.6.17/MTurkR/R/RegisterHITType.R | 12 - MTurkR-0.6.17/MTurkR/R/RejectAssignment.R | 4 MTurkR-0.6.17/MTurkR/R/RejectQualification.R | 2 MTurkR-0.6.17/MTurkR/R/RevokeQualification.R | 2 MTurkR-0.6.17/MTurkR/R/SearchHITs.R | 9 MTurkR-0.6.17/MTurkR/R/SearchQualificationTypes.R | 2 MTurkR-0.6.17/MTurkR/R/SufficientFunds.R | 9 MTurkR-0.6.17/MTurkR/R/UnblockWorker.R | 2 MTurkR-0.6.17/MTurkR/R/UpdateQualificationType.R | 6 MTurkR-0.6.17/MTurkR/R/makeGETparameters.R | 2 MTurkR-0.6.17/MTurkR/R/request.R | 30 +-- MTurkR-0.6.17/MTurkR/R/wizard.R | 25 +- MTurkR-0.6.17/MTurkR/R/wizardsimple.R | 4 MTurkR-0.6.17/MTurkR/README.md | 32 ++- MTurkR-0.6.17/MTurkR/inst/templates/categorization1.xml |only MTurkR-0.6.17/MTurkR/inst/templates/htmlquestion1.xml | 3 MTurkR-0.6.17/MTurkR/inst/templates/htmlquestion2.xml | 3 MTurkR-0.6.17/MTurkR/inst/templates/htmlquestion3.xml |only MTurkR-0.6.17/MTurkR/inst/templates/sentiment1.xml |only MTurkR-0.6.17/MTurkR/inst/templates/surveylink.xml | 20 +- MTurkR-0.6.17/MTurkR/man/AccountBalance.Rd | 10 - MTurkR-0.6.17/MTurkR/man/BulkCreate.Rd | 6 MTurkR-0.6.17/MTurkR/man/GenerateHTMLQuestion.Rd | 5 MTurkR-0.6.17/MTurkR/man/GenerateQualificationRequirement.Rd | 11 - MTurkR-0.6.17/MTurkR/man/GenerateReviewPolicy.Rd | 43 +++- MTurkR-0.6.17/MTurkR/man/MTurkR-package.Rd | 12 - MTurkR-0.6.5.1/MTurkR/R/authenticate.R |only 54 files changed, 346 insertions(+), 244 deletions(-)
Title: Create "Table 1" to Describe Baseline Characteristics
Description: Creates "Table 1", i.e., description of baseline patient
characteristics, which is essential in every medical research.
Supports both continuous and categorical variables, as well as
p-values and standardized mean differences. Weighted data are
supported via the survey package. See github for a screencast.
tableone was inspired by descriptive statistics functions in
Deducer , a Java-based GUI package by Ian Fellows. This package
does not require GUI or Java, and intended for command-line users.
Author: Kazuki Yoshida, Justin Bohn.
Maintainer: Kazuki Yoshida <kazukiyoshida@mail.harvard.edu>
Diff between tableone versions 0.7.2 dated 2015-10-25 and 0.7.3 dated 2015-11-11
DESCRIPTION | 9 - MD5 | 52 ++++---- NAMESPACE | 2 NEWS | 8 + inst/doc/smd.R | 6 inst/doc/smd.Rmd | 6 inst/doc/smd.html | 272 ++++++++++++++++++++++---------------------- man/CreateCatTable.Rd | 4 man/CreateContTable.Rd | 4 man/CreateTableOne.Rd | 4 man/ExtractSmd.Rd | 4 man/ShowRegTable.Rd | 4 man/print.CatTable.Rd | 4 man/print.ContTable.Rd | 4 man/print.TableOne.Rd | 4 man/print.svyCatTable.Rd | 4 man/print.svyContTable.Rd | 4 man/summary.CatTable.Rd | 4 man/summary.ContTable.Rd | 4 man/summary.TableOne.Rd | 4 man/summary.svyCatTable.Rd | 4 man/summary.svyContTable.Rd | 4 man/svyCreateCatTable.Rd | 4 man/svyCreateContTable.Rd | 4 man/svyCreateTableOne.Rd | 4 man/tableone-package.Rd | 4 vignettes/smd.Rmd | 6 27 files changed, 242 insertions(+), 195 deletions(-)
Title: Sparklines and Graphical Tables for TeX and HTML
Description: Create sparklines and graphical tables for documents and websites.
Author: Alexander Kowarik, Bernhard Meindl, Matthias Templ
Maintainer: Alexander Kowarik <alexander.kowarik@statistik.gv.at>
Diff between sparkTable versions 1.0.0 dated 2015-04-20 and 1.1.0 dated 2015-11-11
DESCRIPTION | 12 +++--- MD5 | 12 +++--- NAMESPACE | 5 ++ R/auxFunctions.r | 95 +++++++++++++++++++++++++++++++++++------------------ R/checkerplot.R | 13 ++++--- R/methods.r | 15 ++++---- man/checkerplot.Rd | 4 +- 7 files changed, 98 insertions(+), 58 deletions(-)
Title: The Skew-Normal and Skew-t Distributions
Description: Build and manipulate probability distributions of the skew-normal
family and some related ones, notably the skew-t family, and provide related
statistical methods for data fitting and diagnostics, in the univariate and
the multivariate case.
Author: Adelchi Azzalini <adelchi.azzalini@unipd.it>
Maintainer: Adelchi Azzalini <adelchi.azzalini@unipd.it>
Diff between sn versions 1.2-4 dated 2015-08-25 and 1.3-0 dated 2015-11-11
DESCRIPTION | 11 - MD5 | 30 ++- NAMESPACE | 33 +--- NEWS | 9 + R/sn-funct.R | 396 ++++++++++++++++++++++++++++++++++++++++++++-------- data/ais.rda |binary data/barolo.rda |binary data/frontier.rda |binary data/wines.rda |binary inst/CITATION | 4 inst/doc |only man/dmsn.Rd | 22 +- man/dp2cp.Rd | 62 ++++---- man/dst.Rd | 6 man/profile.selm.Rd |only man/sn-package.Rd | 20 ++ man/wines.Rd | 10 - 17 files changed, 461 insertions(+), 142 deletions(-)
Title: R Commander
Description:
A platform-independent basic-statistics GUI (graphical user interface) for R, based on the tcltk package.
Author: John Fox [aut, cre],
Milan Bouchet-Valat [aut],
Liviu Andronic [ctb],
Michael Ash [ctb],
Theophilius Boye [ctb],
Stefano Calza [ctb],
Andy Chang [ctb],
Philippe Grosjean [ctb],
Richard Heiberger [ctb],
Kosar Karimi Pour [ctb],
G. Jay Kerns [ctb],
Renaud Lancelot [ctb],
Matthieu Lesnoff [ctb],
Uwe Ligges [ctb],
Samir Messad [ctb],
Martin Maechler [ctb],
Robert Muenchen [ctb],
Duncan Murdoch [ctb],
Erich Neuwirth [ctb],
Dan Putler [ctb],
Brian Ripley [ctb],
Miroslav Ristic [ctb],
Peter Wolf [ctb],
Kevin Wright [ctb]
Maintainer: John Fox <jfox@mcmaster.ca>
Diff between Rcmdr versions 2.2-2 dated 2015-10-19 and 2.2-3 dated 2015-11-11
DESCRIPTION | 8 MD5 | 12 NEWS | 771 +-- inst/po/fr/LC_MESSAGES/R-Rcmdr.mo |binary inst/po/sl/LC_MESSAGES/R-Rcmdr.mo |binary man/Rcmdr-package.Rd | 136 po/R-sl.po | 9577 ++++++++++++++++++-------------------- 7 files changed, 5237 insertions(+), 5267 deletions(-)
Title: Nonparametric Interaction Tests for Factorial Designs with
Repeated Measures
Description: Returns nonparametric aligned rank tests for the interaction in two-way factorial designs, on R data sets with repeated measures in 'wide' format. Five ANOVAs tables are reported. A PARAMETRIC one on the original data, one for a CHECK upon the interaction alignments, and three aligned rank tests: one on the aligned REGULAR, one on the FRIEDMAN, and one on the KOCH ranks. In these rank tests, only the resulting values for the interaction are relevant.
Author: Jos Feys
Maintainer: Jos Feys <jos.feys@faber.kuleuven.be>
Diff between npIntFactRep versions 1.3 dated 2015-09-28 and 1.4 dated 2015-11-11
DESCRIPTION | 10 - MD5 | 6 - R/npIntFactRep.R | 310 ++++++++++++++++++++++++++-------------------------- man/npIntFactRep.Rd | 37 ++---- 4 files changed, 179 insertions(+), 184 deletions(-)
Title: A Few GPU Enabled Functions
Description: Provides R interfaces to a handful of common
functions implemented using the Nvidia CUDA toolkit. Some of the
functions require at least GPU Compute Capability 1.3.
Thanks to Craig Stark at UC Irvine for donating time on his lab's Mac.
Author: Josh Buckner [aut, cre],
Mark Seligman [aut],
Justin Wilson [ctb]
Maintainer: Josh Buckner <nullsatz@gmail.com>
Diff between gputools versions 0.28 dated 2013-05-09 and 1.0 dated 2015-11-11
gputools-0.28/gputools/src/Makefile |only gputools-0.28/gputools/src/config.mk |only gputools-1.0/gputools/DESCRIPTION | 29 ++-- gputools-1.0/gputools/INSTALL | 34 ++--- gputools-1.0/gputools/MD5 | 34 +++-- gputools-1.0/gputools/NAMESPACE | 13 ++ gputools-1.0/gputools/NEWS | 3 gputools-1.0/gputools/R/gpuMatMult.R | 2 gputools-1.0/gputools/cleanup | 1 gputools-1.0/gputools/configure |only gputools-1.0/gputools/configure.ac |only gputools-1.0/gputools/man/gpuLsfit.Rd | 6 gputools-1.0/gputools/src/Makefile.in |only gputools-1.0/gputools/src/cuseful.cu | 22 --- gputools-1.0/gputools/src/cuseful.h | 5 gputools-1.0/gputools/src/matmult.cu | 197 ++++++++++++-------------------- gputools-1.0/gputools/src/matmult.h | 1 gputools-1.0/gputools/src/rinterface.cu | 1 gputools-1.0/gputools/tools |only 19 files changed, 155 insertions(+), 193 deletions(-)
Title: Fit the GamBin Model to Species Abundance Distributions
Description: Fits the gambin distribution to species-abundance distributions from
ecological data. 'gambin' is short for 'gamma-binomial'. The main function is
fitGambin, which estimates the 'alpha' parameter of the gambin distribution using
maximum likelihood. Functions are also provided to generate the gambin distribution
and for calculating likelihood statistics.
Author: Michael Krabbe Borregaard, Thomas Matthews & Karl Ugland
Maintainer: Michael Krabbe Borregaard <mkborregaard@snm.ku.dk>
Diff between gambin versions 1.1 dated 2014-05-17 and 1.3 dated 2015-11-11
DESCRIPTION | 20 ++++++++++---------- MD5 | 14 +++++++------- NAMESPACE | 1 + R/dgambin.R | 28 ++++++++++------------------ inst/CITATION | 14 +++++++------- man/dgambin.Rd | 4 ++-- man/fitGambin.Rd | 4 ++-- man/gambin-package.Rd | 6 +++--- 8 files changed, 42 insertions(+), 49 deletions(-)
Title: Augments the Use of 'Asreml' in Fitting Mixed Models
Description: Assists in automating the testing of terms in mixed models when 'asreml' is used
to fit the models. The content falls into the following natural groupings: (i) Data, (ii) Object
manipulation functions, (iii) Model modification functions, (iv) Model testing functions,
(v) Model diagnostics functions, (vi) Prediction production and presentation functions,
(vii) Response transformation functions, and (viii) Miscellaneous functions. A history of the
fitting of a sequence of models is kept in a data frame. Procedures are available for choosing
models that conform to the hierarchy or marginality principle and for displaying predictions
for significant terms in tables and graphs. The package 'asreml' provides a computationally
efficient algorithm for fitting mixed models using Residual Maximum Likelihood. It can be
purchased from 'VSNi' (http://www.vsni.co.uk/) as 'asreml-R', who will supply a zip file for
local installation/updating.
Author: Chris Brien <Chris.Brien@unisa.edu.au>.
Maintainer: Chris Brien <Chris.Brien@unisa.edu.au>
Diff between asremlPlus versions 2.0-2 dated 2015-10-29 and 2.0-3 dated 2015-11-11
asremlPlus-2.0-2/asremlPlus/R/reml.v19.r |only asremlPlus-2.0-3/asremlPlus/DESCRIPTION | 8 +++---- asremlPlus-2.0-3/asremlPlus/MD5 | 14 ++++++------- asremlPlus-2.0-3/asremlPlus/R/reml.v20.r |only asremlPlus-2.0-3/asremlPlus/build/partial.rdb |binary asremlPlus-2.0-3/asremlPlus/inst/NEWS.Rd | 5 ++++ asremlPlus-2.0-3/asremlPlus/inst/doc/asremlPlus-manual.pdf |binary asremlPlus-2.0-3/asremlPlus/man/pred.present.asreml.Rd | 2 - asremlPlus-2.0-3/asremlPlus/man/predictionplot.asreml.Rd | 2 - 9 files changed, 18 insertions(+), 13 deletions(-)