Title: Pedometric Tools and Techniques
Description: Functions to employ many of the tools and techniques used in the
field of pedometrics.
Author: Alessandro Samuel-Rosa [aut, cre],
Lúcia Anjos [ths],
Gustavo Vasques [ths],
Gerard Heuvelink [ths],
Tony Olsen [ctb],
Tom Kincaid [ctb],
Juan Carlos Ruiz Cuetos [ctb],
Maria Eugenia Polo Garcia [ctb],
Pablo Garcia Rodriguez [ctb],
Joshua French [ctb],
Ken Kleinman [ctb],
Dick Brus [ctb],
Frank Harrell Jr [ctb],
Ruo Xu [ctb]
Maintainer: Alessandro Samuel-Rosa <alessandrosamuelrosa@gmail.com>
Diff between pedometrics versions 0.6-3 dated 2015-07-29 and 0.6-4 dated 2015-11-28
DESCRIPTION | 38 +++++-------- MD5 | 90 +++++++++++++++++--------------- NAMESPACE | 9 ++- R/AAAA.R | 12 +++- R/adjR2.R | 2 R/buildMS.R | 4 - R/cdfPlot.R | 2 R/cdfStats.R | 4 - R/cdfTable.R | 8 +- R/checkGMU.R |only R/coordenadas.R | 2 R/cramer.R | 2 R/gcpDiff.R | 4 - R/gcpVector.R | 17 ------ R/optimRandomForest.R |only R/pedometrics.R | 32 ++++++----- R/plotESDA.R | 4 - R/plotHD.R | 4 - R/plotMS.R | 4 - R/statsMS.R | 4 - R/stepVIF.R | 2 R/trend.R | 4 - R/vgmICP.R |only R/vgmLags.R | 124 +++++++++++++++++++++++++++++++-------------- R/vgmSCV.R |only man/adjR2.Rd | 6 +- man/bbox2sp.Rd | 2 man/buildMS.Rd | 50 +++++++++--------- man/cdfPlot.Rd | 6 +- man/cdfStats.Rd | 8 +- man/cdfTable.Rd | 12 ++-- man/checkGMU.Rd |only man/cont2cat.Rd | 9 +-- man/coordenadas.Rd | 8 +- man/cramer.Rd | 10 ++- man/gcpDiff.Rd | 10 ++- man/gcpVector.Rd | 4 + man/numint.Rd | 2 man/optimRandomForest.Rd |only man/pedometrics-package.Rd | 38 +++++++------ man/plotESDA.Rd | 31 +++++------ man/plotHD.Rd | 45 ++++++++-------- man/plotMS.Rd | 117 +++++++++++++++++++++--------------------- man/rowMinCpp.Rd | 2 man/statsMS.Rd | 77 ++++++++++++++------------- man/stepVIF.Rd | 67 ++++++++++++------------ man/trend.Rd | 2 man/vgmICP.Rd |only man/vgmLags.Rd | 60 +++++++++++---------- man/vgmSCV.Rd |only 50 files changed, 510 insertions(+), 428 deletions(-)
Title: Continuous-Time Movement Modeling
Description: Functions for identifying, fitting, and applying continuous-space, continuous-time stochastic movement models to animal tracking data.
Author: Chris H. Fleming and J. M. Calabrese
Maintainer: C. H. Fleming <flemingc@si.edu>
Diff between ctmm versions 0.2.9 dated 2015-10-14 and 0.3.0 dated 2015-11-28
ctmm-0.2.9/ctmm/man/summary.akde.Rd |only ctmm-0.3.0/ctmm/DESCRIPTION | 10 ctmm-0.3.0/ctmm/MD5 | 72 +- ctmm-0.3.0/ctmm/NAMESPACE | 14 ctmm-0.3.0/ctmm/NEWS | 19 ctmm-0.3.0/ctmm/R/generic.R | 28 - ctmm-0.3.0/ctmm/R/kde.R | 67 +- ctmm-0.3.0/ctmm/R/krige.R | 215 ++++---- ctmm-0.3.0/ctmm/R/likelihood.R | 825 +++++++++++++++++++++++--------- ctmm-0.3.0/ctmm/R/periodogram.R | 17 ctmm-0.3.0/ctmm/R/telemetry.R | 267 ++++++---- ctmm-0.3.0/ctmm/R/variogram.R | 30 - ctmm-0.3.0/ctmm/TODO | 31 - ctmm-0.3.0/ctmm/inst/doc/akde.R | 15 ctmm-0.3.0/ctmm/inst/doc/akde.Rmd | 21 ctmm-0.3.0/ctmm/inst/doc/akde.html | 35 - ctmm-0.3.0/ctmm/inst/doc/variogram.R | 52 +- ctmm-0.3.0/ctmm/inst/doc/variogram.Rmd | 78 +-- ctmm-0.3.0/ctmm/inst/doc/variogram.html | 107 ++-- ctmm-0.3.0/ctmm/man/akde.Rd | 22 ctmm-0.3.0/ctmm/man/akde.bandwidth.Rd | 6 ctmm-0.3.0/ctmm/man/as.telemetry.Rd | 15 ctmm-0.3.0/ctmm/man/ctmm-package.Rd | 11 ctmm-0.3.0/ctmm/man/ctmm.fit.Rd | 47 + ctmm-0.3.0/ctmm/man/ctmm.loglike.Rd | 3 ctmm-0.3.0/ctmm/man/export.Rd | 28 - ctmm-0.3.0/ctmm/man/homerange.Rd |only ctmm-0.3.0/ctmm/man/mean.variogram.Rd | 8 ctmm-0.3.0/ctmm/man/occurrence.Rd |only ctmm-0.3.0/ctmm/man/periodogram.Rd | 7 ctmm-0.3.0/ctmm/man/plot.telemetry.Rd | 29 - ctmm-0.3.0/ctmm/man/plot.variogram.Rd | 8 ctmm-0.3.0/ctmm/man/simulate.ctmm.Rd | 6 ctmm-0.3.0/ctmm/man/summary.UD.Rd |only ctmm-0.3.0/ctmm/man/summary.ctmm.Rd | 21 ctmm-0.3.0/ctmm/man/variogram.Rd | 18 ctmm-0.3.0/ctmm/man/variogram.fit.Rd | 4 ctmm-0.3.0/ctmm/vignettes/akde.Rmd | 21 ctmm-0.3.0/ctmm/vignettes/variogram.Rmd | 78 +-- 39 files changed, 1418 insertions(+), 817 deletions(-)
Title: Radiomic Image Processing Toolbox
Description: Functions to extract first and second order statistics from
images.
Author: Joel Carlson
Maintainer: Joel Carlson <jnkcarlson@gmail.com>
Diff between radiomics versions 0.1.0 dated 2015-11-22 and 0.1.1 dated 2015-11-28
radiomics-0.1.0/radiomics/man/glcm-class.Rd |only radiomics-0.1.0/radiomics/man/glrlm-class.Rd |only radiomics-0.1.0/radiomics/man/glszm-class.Rd |only radiomics-0.1.0/radiomics/man/mglszm-class.Rd |only radiomics-0.1.1/radiomics/DESCRIPTION | 8 +- radiomics-0.1.1/radiomics/MD5 | 37 +++++----- radiomics-0.1.1/radiomics/NAMESPACE | 8 +- radiomics-0.1.1/radiomics/R/GLCM.R | 53 ++++++--------- radiomics-0.1.1/radiomics/R/GLRLM.R | 29 +++++--- radiomics-0.1.1/radiomics/R/GLSZM.R | 25 ++++--- radiomics-0.1.1/radiomics/R/ImageQuantize.R | 25 ++++--- radiomics-0.1.1/radiomics/R/MGLSZM.R | 21 ++++-- radiomics-0.1.1/radiomics/R/startupMessage.R |only radiomics-0.1.1/radiomics/README.md | 31 +++++---- radiomics-0.1.1/radiomics/build/vignette.rds |binary radiomics-0.1.1/radiomics/inst/doc/TextureAnalysis.R | 17 ++-- radiomics-0.1.1/radiomics/inst/doc/TextureAnalysis.Rmd | 49 +++++++++----- radiomics-0.1.1/radiomics/inst/doc/TextureAnalysis.html | 55 +++++++++------- radiomics-0.1.1/radiomics/man/discretizeImage.Rd | 4 - radiomics-0.1.1/radiomics/man/glcm.Rd |only radiomics-0.1.1/radiomics/man/glrlm.Rd |only radiomics-0.1.1/radiomics/man/glszm.Rd |only radiomics-0.1.1/radiomics/man/mglszm.Rd |only radiomics-0.1.1/radiomics/vignettes/TextureAnalysis.Rmd | 49 +++++++++----- 24 files changed, 243 insertions(+), 168 deletions(-)
More information about rPowerSampleSize at CRAN
Permanent link
Title: Sparse and Dense Matrix Classes and Methods
Description: Classes and methods for dense and sparse matrices and
operations on them using 'LAPACK' and 'SuiteSparse'.
Author: Douglas Bates <bates@stat.wisc.edu> and Martin Maechler
Maintainer: Martin Maechler <mmaechler+Matrix@gmail.com>
Diff between Matrix versions 1.2-2 dated 2015-07-08 and 1.2-3 dated 2015-11-28
DESCRIPTION | 8 - MD5 | 141 ++++++++++---------- NAMESPACE | 5 R/Auxiliaries.R | 39 +++-- R/Csparse.R | 8 - R/Math.R | 2 R/Matrix.R | 4 R/abIndex.R | 6 R/bind2.R | 16 +- R/dgCMatrix.R | 8 - R/dgeMatrix.R | 4 R/diagMatrix.R | 4 R/dsCMatrix.R | 4 R/dspMatrix.R | 13 - R/dtrMatrix.R | 2 R/kronecker.R | 4 R/ldenseMatrix.R | 14 -- R/ndenseMatrix.R | 14 -- R/sparseMatrix.R | 111 ++++++++++----- R/sparseVector.R | 5 TODO | 8 - build/vignette.rds |binary inst/NEWS.Rd | 31 ++++ inst/doc/Comparisons.pdf |binary inst/doc/Design-issues.pdf |binary inst/doc/Intro2Matrix.pdf |binary inst/doc/Introduction.pdf |binary inst/doc/sparseModels.pdf |binary inst/include/Matrix.h | 28 +++- inst/include/Matrix_stubs.c | 18 +- inst/po/en@quot/LC_MESSAGES/Matrix.mo |binary inst/po/en@quot/LC_MESSAGES/R-Matrix.mo |binary inst/po/ko/LC_MESSAGES/R-Matrix.mo |binary inst/test-tools-Matrix.R | 8 - man/Matrix-class.Rd | 2 man/MatrixClass.Rd |only man/SparseM-conv.Rd | 9 - man/abIndex-class.Rd | 3 man/dgCMatrix-class.Rd | 2 man/dgeMatrix-class.Rd | 2 man/diagonalMatrix-class.Rd | 2 man/dsCMatrix-class.Rd | 2 man/externalFormats.Rd | 4 man/formatSparseM.Rd | 10 + man/graph2T.Rd | 4 man/ldenseMatrix-class.Rd | 2 man/lgeMatrix-class.Rd | 2 man/ndenseMatrix-class.Rd | 2 man/ngeMatrix-class.Rd | 2 man/printSpMatrix.Rd | 26 ++- man/sparseMatrix.Rd | 3 man/sparseVector-class.Rd | 3 po/Matrix.pot | 4 po/R-Matrix.pot | 4 po/R-ko.po | 61 +++++--- po/ko.po | 224 +++++++++++++++++--------------- po/update-me.sh | 7 - src/Csparse.c | 37 +++-- src/Mutils.c | 4 src/Mutils.h | 41 ++++- src/Tsparse.c | 2 src/chm_common.c | 10 - src/chm_common.h | 2 src/cs_utils.c | 4 src/dgCMatrix.c | 4 src/dgeMatrix.c | 3 src/t_Csparse_subassign.c | 4 tests/Class+Meth.R | 11 + tests/Simple.R | 6 tests/bind.R | 12 + tests/bind.Rout.save | 34 ++-- tests/indexing.Rout.save | 64 ++++----- 72 files changed, 643 insertions(+), 480 deletions(-)
Title: Imprecise Inferential Framework for Poisson Sampling Model
Description: A collection of tools for conducting an imprecise inference is provided. Imprecise prior is used for this inference, and imprecise probability theory introduced by Peter Walley (1991) is its underlying theoretical foundation. The package is developed based on the PhD thesis work of Lee (2014). Poisson and zero-truncated Poisson sampling models are mainly studied with two types of prior distributions.
Author: Chel Hee Lee [aut, cre, cph], Mikelis Bickis [aut, ths, cph]
Maintainer: Chel Hee Lee <chl948@mail.usask.ca>
Diff between imPois versions 0.0.6.4 dated 2015-11-21 and 0.0.7.5 dated 2015-11-28
imPois-0.0.6.4/imPois/R/visualize.R |only imPois-0.0.6.4/imPois/TODO |only imPois-0.0.6.4/imPois/inst |only imPois-0.0.6.4/imPois/man/BL.dist.Rd |only imPois-0.0.6.4/imPois/man/cgf.Rd |only imPois-0.0.6.4/imPois/man/evfn.Rd |only imPois-0.0.6.4/imPois/man/ipeglim.Rd |only imPois-0.0.6.4/imPois/man/iprior.Rd |only imPois-0.0.6.4/imPois/man/kcpm.Rd |only imPois-0.0.6.4/imPois/man/summary.impinf.Rd |only imPois-0.0.6.4/imPois/man/update.impinf.Rd |only imPois-0.0.7.5/imPois/ChangeLog | 5 imPois-0.0.7.5/imPois/DESCRIPTION | 14 - imPois-0.0.7.5/imPois/MD5 | 46 ++- imPois-0.0.7.5/imPois/NAMESPACE | 14 + imPois-0.0.7.5/imPois/R/graphics.R |only imPois-0.0.7.5/imPois/R/imPois.R | 120 +++++----- imPois-0.0.7.5/imPois/R/optim.R |only imPois-0.0.7.5/imPois/R/tools.R |only imPois-0.0.7.5/imPois/R/ztrunc.R |only imPois-0.0.7.5/imPois/demo/00Index | 4 imPois-0.0.7.5/imPois/demo/convh.R |only imPois-0.0.7.5/imPois/demo/focus.R |only imPois-0.0.7.5/imPois/demo/levels.R | 64 ++--- imPois-0.0.7.5/imPois/demo/optim.R |only imPois-0.0.7.5/imPois/demo/trans.R | 24 +- imPois-0.0.7.5/imPois/demo/ztrunc.R |only imPois-0.0.7.5/imPois/man/characterize_imprecise_prior.Rd |only imPois-0.0.7.5/imPois/man/expected_value_of_imprecise_distribution.Rd |only imPois-0.0.7.5/imPois/man/hyperpara_optim.Rd |only imPois-0.0.7.5/imPois/man/imPois.Rd |only imPois-0.0.7.5/imPois/man/imprecise_distribution.Rd |only imPois-0.0.7.5/imPois/man/imprecise_learning_from_observation.Rd |only imPois-0.0.7.5/imPois/man/kernel_of_imprecise_prob_measure.Rd |only imPois-0.0.7.5/imPois/man/normalize_imprecise_prob_measure.Rd |only imPois-0.0.7.5/imPois/man/plot_imprecise_object.Rd |only imPois-0.0.7.5/imPois/man/print_imprecise_objects.Rd |only imPois-0.0.7.5/imPois/man/summary_imprecise_object.Rd |only 38 files changed, 160 insertions(+), 131 deletions(-)
Title: Competing Risks Regression Models with Covariate-Adjusted
Censoring Weights
Description: Estimation and regression modeling of subdistribution functions for competing risks data with adjustment for covariate-dependent censoring, as described in He et al. (2015).
Author: Peng He
Maintainer: Peng He <saturnhp@gmail.com>
Diff between wtcrsk versions 1.4 dated 2015-09-22 and 1.5 dated 2015-11-28
DESCRIPTION | 10 +++++----- MD5 | 6 +++--- R/wrap.R | 8 ++++++-- man/wtcrsk-package.Rd | 4 ++-- 4 files changed, 16 insertions(+), 12 deletions(-)
Title: Tools for Remote Sensing Data Analysis
Description: Toolbox for remote sensing image processing and analysis such as
calculating spectral indices, principal component transformation, unsupervised
and supervised classification or fractional cover analyses.
Author: Benjamin Leutner [cre, aut],
Ned Horning [aut]
Maintainer: Benjamin Leutner <benjamin.leutner@uni-wuerzburg.de>
Diff between RStoolbox versions 0.1.2 dated 2015-11-03 and 0.1.3 dated 2015-11-28
RStoolbox-0.1.2/RStoolbox/inst/external/training.rds |only RStoolbox-0.1.3/RStoolbox/DESCRIPTION | 15 RStoolbox-0.1.3/RStoolbox/MD5 | 122 ++-- RStoolbox-0.1.3/RStoolbox/NAMESPACE | 3 RStoolbox-0.1.3/RStoolbox/NEWS | 13 RStoolbox-0.1.3/RStoolbox/R/classifyQA.R | 2 RStoolbox-0.1.3/RStoolbox/R/encodeQA.R | 2 RStoolbox-0.1.3/RStoolbox/R/histMatch.R | 8 RStoolbox-0.1.3/RStoolbox/R/internalFunctions.R | 4 RStoolbox-0.1.3/RStoolbox/R/mlc.R | 13 RStoolbox-0.1.3/RStoolbox/R/panSharpen.R | 4 RStoolbox-0.1.3/RStoolbox/R/readMeta.R | 2 RStoolbox-0.1.3/RStoolbox/R/saveRSTBX.R | 45 + RStoolbox-0.1.3/RStoolbox/R/stackMeta.R | 2 RStoolbox-0.1.3/RStoolbox/R/superClass.R | 246 ++++++---- RStoolbox-0.1.3/RStoolbox/R/unsuperClass.R | 5 RStoolbox-0.1.3/RStoolbox/README.md | 2 RStoolbox-0.1.3/RStoolbox/inst/external/trainingPoints.rds |only RStoolbox-0.1.3/RStoolbox/inst/external/trainingPolygons.rds |only RStoolbox-0.1.3/RStoolbox/man/ImageMetaData.Rd | 2 RStoolbox-0.1.3/RStoolbox/man/RStoolbox.Rd | 4 RStoolbox-0.1.3/RStoolbox/man/classifyQA.Rd | 8 RStoolbox-0.1.3/RStoolbox/man/cloudMask.Rd | 15 RStoolbox-0.1.3/RStoolbox/man/cloudShadowMask.Rd | 15 RStoolbox-0.1.3/RStoolbox/man/coregisterImages.Rd | 18 RStoolbox-0.1.3/RStoolbox/man/decodeQA.Rd | 2 RStoolbox-0.1.3/RStoolbox/man/encodeQA.Rd | 4 RStoolbox-0.1.3/RStoolbox/man/estimateHaze.Rd | 12 RStoolbox-0.1.3/RStoolbox/man/fCover.Rd | 32 - RStoolbox-0.1.3/RStoolbox/man/fortify.raster.Rd | 3 RStoolbox-0.1.3/RStoolbox/man/getMeta.Rd | 7 RStoolbox-0.1.3/RStoolbox/man/ggR.Rd | 22 RStoolbox-0.1.3/RStoolbox/man/ggRGB.Rd | 13 RStoolbox-0.1.3/RStoolbox/man/histMatch.Rd | 8 RStoolbox-0.1.3/RStoolbox/man/lsat.Rd | 2 RStoolbox-0.1.3/RStoolbox/man/normImage.Rd | 2 RStoolbox-0.1.3/RStoolbox/man/panSharpen.Rd | 15 RStoolbox-0.1.3/RStoolbox/man/pifMatch.Rd | 12 RStoolbox-0.1.3/RStoolbox/man/predict.superClass.Rd |only RStoolbox-0.1.3/RStoolbox/man/radCor.Rd | 16 RStoolbox-0.1.3/RStoolbox/man/rasterCVA.Rd | 10 RStoolbox-0.1.3/RStoolbox/man/rasterEntropy.Rd | 2 RStoolbox-0.1.3/RStoolbox/man/rasterPCA.Rd | 5 RStoolbox-0.1.3/RStoolbox/man/readEE.Rd | 7 RStoolbox-0.1.3/RStoolbox/man/readMeta.Rd | 3 RStoolbox-0.1.3/RStoolbox/man/readSLI.Rd | 4 RStoolbox-0.1.3/RStoolbox/man/rescaleImage.Rd | 2 RStoolbox-0.1.3/RStoolbox/man/rlogo.Rd | 2 RStoolbox-0.1.3/RStoolbox/man/rsOpts.Rd | 3 RStoolbox-0.1.3/RStoolbox/man/sam.Rd | 8 RStoolbox-0.1.3/RStoolbox/man/saveRSTBX.Rd | 14 RStoolbox-0.1.3/RStoolbox/man/spectralIndices.Rd | 8 RStoolbox-0.1.3/RStoolbox/man/srtm.Rd | 2 RStoolbox-0.1.3/RStoolbox/man/stackMeta.Rd | 6 RStoolbox-0.1.3/RStoolbox/man/superClass.Rd | 24 RStoolbox-0.1.3/RStoolbox/man/tasseledCap.Rd | 2 RStoolbox-0.1.3/RStoolbox/man/topCor.Rd | 9 RStoolbox-0.1.3/RStoolbox/man/unsuperClass.Rd | 10 RStoolbox-0.1.3/RStoolbox/man/writeSLI.Rd | 4 RStoolbox-0.1.3/RStoolbox/src/gainOffsetRescale.cpp | 2 RStoolbox-0.1.3/RStoolbox/src/predictKmeans.cpp | 2 RStoolbox-0.1.3/RStoolbox/tests/testthat/test-ggplot.R | 6 RStoolbox-0.1.3/RStoolbox/tests/testthat/test-histMatch.R |only RStoolbox-0.1.3/RStoolbox/tests/testthat/test-panSharpen.R |only RStoolbox-0.1.3/RStoolbox/tests/testthat/test-saveReadRSTBX.R |only RStoolbox-0.1.3/RStoolbox/tests/testthat/test-superClass.R |only 66 files changed, 484 insertions(+), 351 deletions(-)
Title: A Robust, High Performance JSON Parser and Generator for R
Description: A fast JSON parser and generator optimized for statistical data
and the web. Started out as a fork of 'RJSONIO', but has been completely
rewritten in recent versions. The package offers flexible, robust, high
performance tools for working with JSON in R and is particularly powerful
for building pipelines and interacting with a web API. The implementation is
based on the mapping described in the vignette (Ooms, 2014). In addition to
converting JSON data from/to R objects, 'jsonlite' contains functions to
stream, validate, and prettify JSON data. The unit tests included with the
package verify that all edge cases are encoded and decoded consistently for
use with dynamic data in systems and applications.
Author: Jeroen Ooms, Duncan Temple Lang, Lloyd Hilaiel
Maintainer: Jeroen Ooms <jeroen.ooms@stat.ucla.edu>
Diff between jsonlite versions 0.9.18 dated 2015-11-25 and 0.9.19 dated 2015-11-28
jsonlite-0.9.18/jsonlite/R/onLoad.R |only jsonlite-0.9.19/jsonlite/DESCRIPTION | 6 +++--- jsonlite-0.9.19/jsonlite/MD5 | 15 +++++++-------- jsonlite-0.9.19/jsonlite/NAMESPACE | 1 - jsonlite-0.9.19/jsonlite/NEWS | 4 ++++ jsonlite-0.9.19/jsonlite/R/fromJSON.R | 4 ++-- jsonlite-0.9.19/jsonlite/R/toJSON.R | 10 ---------- jsonlite-0.9.19/jsonlite/inst/doc/json-mapping.pdf |binary jsonlite-0.9.19/jsonlite/man/fromJSON.Rd | 1 - 9 files changed, 16 insertions(+), 25 deletions(-)