Wed, 02 Dec 2015

Package rtson updated to version 1.1 with previous version 1.0 dated 2015-11-25

Title: Typed JSON
Description: TSON, short for Typed JSON, is a binary-encoded serialization of JSON like document that support JavaScript typed data (https://github.com/amaurel/TSON).
Author: Alexandre Maurel
Maintainer: Alexandre Maurel <alexandre.maurel@gmail.com>

Diff between rtson versions 1.0 dated 2015-11-25 and 1.1 dated 2015-12-02

 DESCRIPTION                 |    6 +++---
 MD5                         |   13 +++++++------
 NAMESPACE                   |    1 +
 R/deserializer.R            |   19 ++++++++++++++-----
 R/utils.R                   |   16 ++++++++++++++++
 README.md                   |    8 ++++++++
 man/tson.scalar.Rd          |only
 tests/testthat/test_rtson.R |   21 ++++++++++++++++-----
 8 files changed, 65 insertions(+), 19 deletions(-)

More information about rtson at CRAN
Permanent link

Package paleotree updated to version 2.6 with previous version 2.5 dated 2015-09-21

Title: Paleontological and Phylogenetic Analyses of Evolution
Description: Provides tools for transforming, time-scaling, and modifying phylogenies containing extinct (i.e. fossil) lineages. In particular, most users are interested in the functions timePaleoPhy, bin_timePaleoPhy, cal3TimePaleoPhy and bin_cal3TimePaleoPhy, which time-scale cladograms of fossil taxa into dated phylogenies. This package also contains a large number of likelihood functions for estimating sampling and diversification rates from different types of data available from the fossil record (e.g. range data, occurrence data, etc). paleotree users can also simulate diversification and sampling in the fossil record using the function simFossilRecord, which is a detailed simulator for branching birth-death-sampling processes composed of discrete taxonomic units arranged in ancestor-descendant relationships. Users can use simFossilRecord to simulate diversification in incompletely sampled fossil records, under various models of morphological differentiation (i.e. the various patterns by which morphotaxa originate from one another), and with time-dependent, longevity-dependent and/or diversity-dependent rates of diversification, extinction and sampling. Additional functions allow users to translate simulated ancestor-descendant data from simFossilRecord into standard time-scaled phylogenies or unscaled cladograms that reflect the relationships among taxon units.
Author: David W. Bapst
Maintainer: David W. Bapst <dwbapst@gmail.com>

Diff between paleotree versions 2.5 dated 2015-09-21 and 2.6 dated 2015-12-02

 paleotree-2.5/paleotree/R/getSampProbDisc.R             |only
 paleotree-2.5/paleotree/R/getSampRateCont.R             |only
 paleotree-2.5/paleotree/R/simFossilTaxa.R               |only
 paleotree-2.5/paleotree/R/simFossilTaxa_SRCond.R        |only
 paleotree-2.5/paleotree/R/simPaleoTrees.R               |only
 paleotree-2.5/paleotree/man/getSampProbDisc.Rd          |only
 paleotree-2.5/paleotree/man/getSampRateCont.Rd          |only
 paleotree-2.5/paleotree/man/simFossilTaxa.Rd            |only
 paleotree-2.5/paleotree/man/simFossilTaxa_SRCond.Rd     |only
 paleotree-2.5/paleotree/man/simPaleoTrees.Rd            |only
 paleotree-2.6/paleotree/CHANGELOG                       |   15 +
 paleotree-2.6/paleotree/DESCRIPTION                     |   31 +-
 paleotree-2.6/paleotree/MD5                             |  215 +++++++---------
 paleotree-2.6/paleotree/NAMESPACE                       |    7 
 paleotree-2.6/paleotree/R/DiversityCurves.R             |   23 +
 paleotree-2.6/paleotree/R/SamplingConv.R                |    4 
 paleotree-2.6/paleotree/R/binTimeData.R                 |   12 
 paleotree-2.6/paleotree/R/branchClasses.R               |    6 
 paleotree-2.6/paleotree/R/cal3TimePaleoPhy.R            |   80 +++--
 paleotree-2.6/paleotree/R/cladogeneticTraitCont.R       |   33 +-
 paleotree-2.6/paleotree/R/compareTimescaling.R          |   12 
 paleotree-2.6/paleotree/R/constrainParPaleo.R           |    4 
 paleotree-2.6/paleotree/R/dateNodes.R                   |    8 
 paleotree-2.6/paleotree/R/depthRainbow.R                |    2 
 paleotree-2.6/paleotree/R/divCurveFossilRecordSim.R     |   33 ++
 paleotree-2.6/paleotree/R/durationFreq.R                |   24 +
 paleotree-2.6/paleotree/R/freqRat.R                     |   66 +++-
 paleotree-2.6/paleotree/R/horizonSampRate.R             |    5 
 paleotree-2.6/paleotree/R/inverseSurv.R                 |    9 
 paleotree-2.6/paleotree/R/macroperforateForam.R         |   10 
 paleotree-2.6/paleotree/R/minBranchLength.R             |   10 
 paleotree-2.6/paleotree/R/modelMethods.R                |    4 
 paleotree-2.6/paleotree/R/modifyTerminalBranches.R      |   30 +-
 paleotree-2.6/paleotree/R/multiDiv.R                    |   43 +--
 paleotree-2.6/paleotree/R/paleotree-package.R           |    6 
 paleotree-2.6/paleotree/R/parentChild2taxonTree.R       |    6 
 paleotree-2.6/paleotree/R/perCapitaRates.R              |    9 
 paleotree-2.6/paleotree/R/plotTraitgram.R               |    6 
 paleotree-2.6/paleotree/R/sampleRanges.R                |   22 +
 paleotree-2.6/paleotree/R/seqTimeList.R                 |   12 
 paleotree-2.6/paleotree/R/simFossilRecord.R             |   23 +
 paleotree-2.6/paleotree/R/simFossilRecordInternal.R     |    5 
 paleotree-2.6/paleotree/R/simFossilRecordMethods.R      |   15 -
 paleotree-2.6/paleotree/R/taxa2cladogram.R              |   32 +-
 paleotree-2.6/paleotree/R/taxa2phylo.R                  |   36 +-
 paleotree-2.6/paleotree/R/taxonSortPBDBocc.R            |   17 -
 paleotree-2.6/paleotree/R/termTaxa.R                    |   97 ++++---
 paleotree-2.6/paleotree/R/timeLadderTree.R              |    4 
 paleotree-2.6/paleotree/R/timePaleoPhy.R                |   14 -
 paleotree-2.6/paleotree/R/timeSliceTree.R               |   26 +
 paleotree-2.6/paleotree/README                          |    6 
 paleotree-2.6/paleotree/man/DiversityCurves.Rd          |   41 +--
 paleotree-2.6/paleotree/man/SamplingConv.Rd             |    9 
 paleotree-2.6/paleotree/man/SongZhangDicrano.Rd         |   11 
 paleotree-2.6/paleotree/man/binTimeData.Rd              |   16 -
 paleotree-2.6/paleotree/man/branchClasses.Rd            |   22 -
 paleotree-2.6/paleotree/man/cal3TimePaleoPhy.Rd         |  100 ++++---
 paleotree-2.6/paleotree/man/cladogeneticTraitCont.Rd    |   27 +-
 paleotree-2.6/paleotree/man/communityEcology.Rd         |    7 
 paleotree-2.6/paleotree/man/compareTimescaling.Rd       |    8 
 paleotree-2.6/paleotree/man/constrainParPaleo.Rd        |   23 -
 paleotree-2.6/paleotree/man/createMrBayesConstraints.Rd |    6 
 paleotree-2.6/paleotree/man/dateNodes.Rd                |   10 
 paleotree-2.6/paleotree/man/degradeTree.Rd              |   14 -
 paleotree-2.6/paleotree/man/depthRainbow.Rd             |    4 
 paleotree-2.6/paleotree/man/divCurveFossilRecordSim.Rd  |    7 
 paleotree-2.6/paleotree/man/durationFreq.Rd             |   35 +-
 paleotree-2.6/paleotree/man/equation2function.Rd        |    2 
 paleotree-2.6/paleotree/man/expandTaxonTree.Rd          |    4 
 paleotree-2.6/paleotree/man/footeValues.Rd              |   44 +--
 paleotree-2.6/paleotree/man/freqRat.Rd                  |   68 +++--
 paleotree-2.6/paleotree/man/graptDisparity.Rd           |   16 -
 paleotree-2.6/paleotree/man/graptPBDB.Rd                |    6 
 paleotree-2.6/paleotree/man/horizonSampRate.Rd          |    9 
 paleotree-2.6/paleotree/man/inverseSurv.Rd              |   39 +-
 paleotree-2.6/paleotree/man/kanto.Rd                    |    7 
 paleotree-2.6/paleotree/man/macroperforateForam.Rd      |   34 +-
 paleotree-2.6/paleotree/man/makePBDBtaxonTree.Rd        |   15 -
 paleotree-2.6/paleotree/man/minBranchLength.Rd          |    9 
 paleotree-2.6/paleotree/man/minCharChange.Rd            |   29 +-
 paleotree-2.6/paleotree/man/modelMethods.Rd             |    9 
 paleotree-2.6/paleotree/man/modifyTerminalBranches.Rd   |   22 +
 paleotree-2.6/paleotree/man/multiDiv.Rd                 |   52 ++-
 paleotree-2.6/paleotree/man/nearestNeighborDist.Rd      |   17 -
 paleotree-2.6/paleotree/man/occData2timeList.Rd         |   10 
 paleotree-2.6/paleotree/man/optimPaleo.Rd               |    5 
 paleotree-2.6/paleotree/man/paleotree-package.Rd        |   12 
 paleotree-2.6/paleotree/man/parentChild2taxonTree.Rd    |   14 -
 paleotree-2.6/paleotree/man/perCapitaRates.Rd           |   31 +-
 paleotree-2.6/paleotree/man/perfectParsCharTree.Rd      |    8 
 paleotree-2.6/paleotree/man/plotOccData.Rd              |    9 
 paleotree-2.6/paleotree/man/plotTraitgram.Rd            |    4 
 paleotree-2.6/paleotree/man/pqr2Ps.Rd                   |    4 
 paleotree-2.6/paleotree/man/probAnc.Rd                  |   27 +-
 paleotree-2.6/paleotree/man/resolveTreeChar.Rd          |   20 -
 paleotree-2.6/paleotree/man/retiolitinae.Rd             |   11 
 paleotree-2.6/paleotree/man/reverseList.Rd              |    4 
 paleotree-2.6/paleotree/man/rootSplit.Rd                |    4 
 paleotree-2.6/paleotree/man/sampleRanges.Rd             |   26 +
 paleotree-2.6/paleotree/man/seqTimeList.Rd              |   22 -
 paleotree-2.6/paleotree/man/simFossilRecord.Rd          |   77 +++--
 paleotree-2.6/paleotree/man/simFossilRecordMethods.Rd   |   14 -
 paleotree-2.6/paleotree/man/taxa2cladogram.Rd           |   29 +-
 paleotree-2.6/paleotree/man/taxa2phylo.Rd               |   29 +-
 paleotree-2.6/paleotree/man/taxonSortPBDBocc.Rd         |   32 +-
 paleotree-2.6/paleotree/man/taxonTable2taxonTree.Rd     |    4 
 paleotree-2.6/paleotree/man/termTaxa.Rd                 |   63 ++--
 paleotree-2.6/paleotree/man/testEdgeMat.Rd              |    3 
 paleotree-2.6/paleotree/man/timeLadderTree.Rd           |   10 
 paleotree-2.6/paleotree/man/timeList2fourDate.Rd        |    3 
 paleotree-2.6/paleotree/man/timePaleoPhy.Rd             |   46 +--
 paleotree-2.6/paleotree/man/timeSliceTree.Rd            |   20 -
 paleotree-2.6/paleotree/man/unitLengthTree.Rd           |    4 
 paleotree-2.6/paleotree/tests                           |only
 114 files changed, 1367 insertions(+), 922 deletions(-)

More information about paleotree at CRAN
Permanent link

Package ndtv updated to version 0.8.0 with previous version 0.7.0 dated 2015-10-15

Title: Network Dynamic Temporal Visualizations
Description: Renders dynamic network data from 'networkDynamic' objects as movies, interactive animations, or other representations of changing relational structures and attributes.
Author: Skye Bender-deMoll [cre, aut], Martina Morris [ctb]
Maintainer: Skye Bender-deMoll <skyebend@uw.edu>

Diff between ndtv versions 0.7.0 dated 2015-10-15 and 0.8.0 dated 2015-12-02

 ChangeLog                               |    6 +++++-
 DESCRIPTION                             |    8 ++++----
 MD5                                     |   15 ++++++++-------
 NAMESPACE                               |    5 ++++-
 R/ndtvAnimationWidget.R                 |    5 ++++-
 inst/doc/ndtv.pdf                       |binary
 inst/htmlwidgets/ndtvAnimationWidget.js |   19 +++++++++++++++----
 man/ndtvAnimationWidget.Rd              |only
 man/stergm.sim.1.Rd                     |    4 +++-
 9 files changed, 43 insertions(+), 19 deletions(-)

More information about ndtv at CRAN
Permanent link

Package moveHMM updated to version 1.1 with previous version 1.0 dated 2015-10-23

Title: Animal Movement Modelling using Hidden Markov Models
Description: Provides tools for animal movement modelling using hidden Markov models. These include processing of tracking data, fitting HMMs to movement data, visualization of data and fitted model, decoding of the state process...
Author: Theo Michelot, Roland Langrock, Toby Patterson, Eric Rexstad
Maintainer: Theo Michelot <theo.michelot@insa-rouen.fr>

Diff between moveHMM versions 1.0 dated 2015-10-23 and 1.1 dated 2015-12-02

 moveHMM-1.0/moveHMM/inst/doc/moveHMM-guide.pdf.asis  |only
 moveHMM-1.0/moveHMM/vignettes/moveHMM-guide.pdf.asis |only
 moveHMM-1.1/moveHMM/DESCRIPTION                      |   19 +-
 moveHMM-1.1/moveHMM/MD5                              |  133 +++++++++----------
 moveHMM-1.1/moveHMM/NAMESPACE                        |    3 
 moveHMM-1.1/moveHMM/R/CI.R                           |   24 +++
 moveHMM-1.1/moveHMM/R/angleCI.R                      |    3 
 moveHMM-1.1/moveHMM/R/exGen.R                        |    2 
 moveHMM-1.1/moveHMM/R/fitHMM.R                       |   46 +++++-
 moveHMM-1.1/moveHMM/R/logAlpha.R                     |    4 
 moveHMM-1.1/moveHMM/R/logBeta.R                      |    4 
 moveHMM-1.1/moveHMM/R/moveHMM.R                      |   11 -
 moveHMM-1.1/moveHMM/R/parDef.R                       |   19 +-
 moveHMM-1.1/moveHMM/R/plotPR.R                       |   21 ++-
 moveHMM-1.1/moveHMM/R/plotStates.R                   |    4 
 moveHMM-1.1/moveHMM/R/plot_moveData.R                |    1 
 moveHMM-1.1/moveHMM/R/plot_moveHMM.R                 |   53 ++++---
 moveHMM-1.1/moveHMM/R/prepData.R                     |    1 
 moveHMM-1.1/moveHMM/R/print_moveHMM.R                |   30 ----
 moveHMM-1.1/moveHMM/R/pseudoRes.R                    |    9 -
 moveHMM-1.1/moveHMM/R/simData.R                      |  127 ++++++++++++++----
 moveHMM-1.1/moveHMM/R/summary_moveData.R             |    5 
 moveHMM-1.1/moveHMM/R/viterbi.R                      |    4 
 moveHMM-1.1/moveHMM/README.md                        |only
 moveHMM-1.1/moveHMM/build/vignette.rds               |binary
 moveHMM-1.1/moveHMM/data/example.RData               |binary
 moveHMM-1.1/moveHMM/inst/doc/moveHMM-guide.R         |only
 moveHMM-1.1/moveHMM/inst/doc/moveHMM-guide.Rnw       |only
 moveHMM-1.1/moveHMM/inst/doc/moveHMM-guide.pdf       |binary
 moveHMM-1.1/moveHMM/man/AIC.moveHMM.Rd               |    3 
 moveHMM-1.1/moveHMM/man/CI.Rd                        |    3 
 moveHMM-1.1/moveHMM/man/allProbs.Rd                  |    2 
 moveHMM-1.1/moveHMM/man/angleCI.Rd                   |    2 
 moveHMM-1.1/moveHMM/man/dexp_rcpp.Rd                 |    2 
 moveHMM-1.1/moveHMM/man/dgamma_rcpp.Rd               |    2 
 moveHMM-1.1/moveHMM/man/dlnorm_rcpp.Rd               |    2 
 moveHMM-1.1/moveHMM/man/dvm_rcpp.Rd                  |    2 
 moveHMM-1.1/moveHMM/man/dweibull_rcpp.Rd             |    2 
 moveHMM-1.1/moveHMM/man/dwrpcauchy_rcpp.Rd           |    2 
 moveHMM-1.1/moveHMM/man/exGen.Rd                     |    2 
 moveHMM-1.1/moveHMM/man/example.Rd                   |    2 
 moveHMM-1.1/moveHMM/man/fitHMM.Rd                    |    7 -
 moveHMM-1.1/moveHMM/man/is.moveData.Rd               |    2 
 moveHMM-1.1/moveHMM/man/is.moveHMM.Rd                |    2 
 moveHMM-1.1/moveHMM/man/logAlpha.Rd                  |    2 
 moveHMM-1.1/moveHMM/man/logBeta.Rd                   |    2 
 moveHMM-1.1/moveHMM/man/moveData.Rd                  |    2 
 moveHMM-1.1/moveHMM/man/moveHMM.Rd                   |   10 -
 moveHMM-1.1/moveHMM/man/n2w.Rd                       |    3 
 moveHMM-1.1/moveHMM/man/nLogLike.Rd                  |    3 
 moveHMM-1.1/moveHMM/man/nLogLike_rcpp.Rd             |    2 
 moveHMM-1.1/moveHMM/man/parDef.Rd                    |    5 
 moveHMM-1.1/moveHMM/man/plot.moveData.Rd             |    3 
 moveHMM-1.1/moveHMM/man/plot.moveHMM.Rd              |    9 +
 moveHMM-1.1/moveHMM/man/plotPR.Rd                    |   12 +
 moveHMM-1.1/moveHMM/man/plotStates.Rd                |    3 
 moveHMM-1.1/moveHMM/man/prepData.Rd                  |    3 
 moveHMM-1.1/moveHMM/man/print.moveHMM.Rd             |    3 
 moveHMM-1.1/moveHMM/man/pseudoRes.Rd                 |    5 
 moveHMM-1.1/moveHMM/man/simData.Rd                   |   49 ++++---
 moveHMM-1.1/moveHMM/man/stateProbs.Rd                |    3 
 moveHMM-1.1/moveHMM/man/summary.moveData.Rd          |    3 
 moveHMM-1.1/moveHMM/man/trMatrix_rcpp.Rd             |    2 
 moveHMM-1.1/moveHMM/man/turnAngle.Rd                 |    2 
 moveHMM-1.1/moveHMM/man/viterbi.Rd                   |    3 
 moveHMM-1.1/moveHMM/man/w2n.Rd                       |    4 
 moveHMM-1.1/moveHMM/tests/testthat/test_fitHMM.R     |    1 
 moveHMM-1.1/moveHMM/tests/testthat/test_parDef.R     |    4 
 moveHMM-1.1/moveHMM/vignettes/models.RData           |only
 moveHMM-1.1/moveHMM/vignettes/moveHMM-guide.Rnw      |only
 moveHMM-1.1/moveHMM/vignettes/step_angle_figure.pdf  |only
 moveHMM-1.1/moveHMM/vignettes/struct.pdf             |only
 72 files changed, 433 insertions(+), 265 deletions(-)

More information about moveHMM at CRAN
Permanent link

Package lubridate updated to version 1.5.0 with previous version 1.3.3 dated 2013-12-31

Title: Make Dealing with Dates a Little Easier
Description: Functions to work with date-times and timespans: fast and user friendly parsing of date-time data, extraction and updating of components of a date-time (years, months, days, hours, minutes, and seconds), algebraic manipulation on date-time and timespan objects. The 'lubridate' package has a consistent and memorable syntax that makes working with dates easy and fun.
Author: Garrett Grolemund [aut], Vitalie Spinu [aut, cre], Hadley Wickham [aut], Jan Lyttle [ctb], Imanuel Constigan [ctb], Jason Law [ctb], Doug Mitarotonda [ctb], Joseph Larmarange [ctb], Jonathan Boiser [ctb], Chel Hee Lee [ctb]
Maintainer: Vitalie Spinu <spinuvit@gmail.com>

Diff between lubridate versions 1.3.3 dated 2013-12-31 and 1.5.0 dated 2015-12-02

 lubridate-1.3.3/lubridate/NEWS                     |only
 lubridate-1.3.3/lubridate/inst/tests               |only
 lubridate-1.3.3/lubridate/man/ceiling_date.Rd      |only
 lubridate-1.3.3/lubridate/man/dseconds.Rd          |only
 lubridate-1.3.3/lubridate/man/floor_date.Rd        |only
 lubridate-1.3.3/lubridate/man/is.duration.Rd       |only
 lubridate-1.3.3/lubridate/man/is.interval.Rd       |only
 lubridate-1.3.3/lubridate/man/is.period.Rd         |only
 lubridate-1.3.3/lubridate/man/lubridate.Rd         |only
 lubridate-1.3.3/lubridate/man/lubridate_formats.Rd |only
 lubridate-1.3.3/lubridate/man/new_difftime.Rd      |only
 lubridate-1.3.3/lubridate/man/new_duration.Rd      |only
 lubridate-1.3.3/lubridate/man/new_interval.Rd      |only
 lubridate-1.3.3/lubridate/man/new_period.Rd        |only
 lubridate-1.3.3/lubridate/man/seconds.Rd           |only
 lubridate-1.3.3/lubridate/man/seconds_to_period.Rd |only
 lubridate-1.3.3/lubridate/man/sundays.Rd           |only
 lubridate-1.3.3/lubridate/man/wday.Rd              |only
 lubridate-1.3.3/lubridate/man/yday.Rd              |only
 lubridate-1.3.3/lubridate/tests/test-all.R         |only
 lubridate-1.5.0/lubridate/DESCRIPTION              |   81 +--
 lubridate-1.5.0/lubridate/MD5                      |  298 ++++++-------
 lubridate-1.5.0/lubridate/NAMESPACE                |   50 +-
 lubridate-1.5.0/lubridate/NEWS.md                  |only
 lubridate-1.5.0/lubridate/R/POSIXt.r               |   16 
 lubridate-1.5.0/lubridate/R/accessors-day.r        |  143 +++---
 lubridate-1.5.0/lubridate/R/accessors-dst.r        |    6 
 lubridate-1.5.0/lubridate/R/accessors-hour.r       |   11 
 lubridate-1.5.0/lubridate/R/accessors-minute.r     |    9 
 lubridate-1.5.0/lubridate/R/accessors-month.r      |   69 ++-
 lubridate-1.5.0/lubridate/R/accessors-second.r     |    7 
 lubridate-1.5.0/lubridate/R/accessors-tz.r         |   11 
 lubridate-1.5.0/lubridate/R/accessors-week.r       |   30 -
 lubridate-1.5.0/lubridate/R/accessors-year.r       |   21 
 lubridate-1.5.0/lubridate/R/coercion.r             |  293 ++++++++-----
 lubridate-1.5.0/lubridate/R/constants.r            |only
 lubridate-1.5.0/lubridate/R/decimal-dates.r        |   60 +-
 lubridate-1.5.0/lubridate/R/deprecated.r           |only
 lubridate-1.5.0/lubridate/R/difftimes.r            |  117 +++--
 lubridate-1.5.0/lubridate/R/durations.r            |  389 ++++++++----------
 lubridate-1.5.0/lubridate/R/epochs.r               |   16 
 lubridate-1.5.0/lubridate/R/guess.r                |  322 ++++++--------
 lubridate-1.5.0/lubridate/R/help.r                 |   13 
 lubridate-1.5.0/lubridate/R/instants.r             |    2 
 lubridate-1.5.0/lubridate/R/intervals.r            |  217 +++++-----
 lubridate-1.5.0/lubridate/R/ops-%m+%.r             |  169 ++++---
 lubridate-1.5.0/lubridate/R/ops-addition.r         |   22 -
 lubridate-1.5.0/lubridate/R/ops-division.r         |   35 -
 lubridate-1.5.0/lubridate/R/ops-modulo.r           |   27 -
 lubridate-1.5.0/lubridate/R/parse.r                |  176 ++++----
 lubridate-1.5.0/lubridate/R/periods.r              |  452 +++++++++------------
 lubridate-1.5.0/lubridate/R/pretty.r               |   62 +-
 lubridate-1.5.0/lubridate/R/round.r                |  208 ++++-----
 lubridate-1.5.0/lubridate/R/stamp.r                |   13 
 lubridate-1.5.0/lubridate/R/timespans.r            |   51 ++
 lubridate-1.5.0/lubridate/R/update.r               |  216 +++++-----
 lubridate-1.5.0/lubridate/R/util.r                 |    2 
 lubridate-1.5.0/lubridate/README.md                |only
 lubridate-1.5.0/lubridate/build/vignette.rds       |binary
 lubridate-1.5.0/lubridate/inst/doc/lubridate.R     |   25 -
 lubridate-1.5.0/lubridate/inst/doc/lubridate.Rmd   |    6 
 lubridate-1.5.0/lubridate/inst/doc/lubridate.html  |  180 ++++----
 lubridate-1.5.0/lubridate/man/DateCoercion.Rd      |    5 
 lubridate-1.5.0/lubridate/man/DateUpdate.Rd        |   64 --
 lubridate-1.5.0/lubridate/man/Deprecated.Rd        |only
 lubridate-1.5.0/lubridate/man/Duration-class.Rd    |   37 -
 lubridate-1.5.0/lubridate/man/Interval-class.Rd    |   50 +-
 lubridate-1.5.0/lubridate/man/Period-class.Rd      |  130 +++---
 lubridate-1.5.0/lubridate/man/Timespan-class.Rd    |   10 
 lubridate-1.5.0/lubridate/man/add_epoch_to_date.Rd |   17 
 lubridate-1.5.0/lubridate/man/am.Rd                |   15 
 lubridate-1.5.0/lubridate/man/as.duration.Rd       |   50 +-
 lubridate-1.5.0/lubridate/man/as.interval.Rd       |   46 +-
 lubridate-1.5.0/lubridate/man/as.period.Rd         |  106 ++--
 lubridate-1.5.0/lubridate/man/date_decimal.Rd      |   19 
 lubridate-1.5.0/lubridate/man/day.Rd               |only
 lubridate-1.5.0/lubridate/man/days_in_month.Rd     |   14 
 lubridate-1.5.0/lubridate/man/decimal_date.Rd      |   11 
 lubridate-1.5.0/lubridate/man/dst.Rd               |   21 
 lubridate-1.5.0/lubridate/man/duration.Rd          |   89 ++--
 lubridate-1.5.0/lubridate/man/fit_to_timeline.Rd   |   75 ++-
 lubridate-1.5.0/lubridate/man/force_tz.Rd          |   34 -
 lubridate-1.5.0/lubridate/man/guess_formats.Rd     |   34 -
 lubridate-1.5.0/lubridate/man/here.Rd              |   10 
 lubridate-1.5.0/lubridate/man/hm.Rd                |   32 -
 lubridate-1.5.0/lubridate/man/hms.Rd               |   36 -
 lubridate-1.5.0/lubridate/man/hour.Rd              |   15 
 lubridate-1.5.0/lubridate/man/int_aligns.Rd        |   26 -
 lubridate-1.5.0/lubridate/man/int_diff.Rd          |   19 
 lubridate-1.5.0/lubridate/man/int_end.Rd           |   20 
 lubridate-1.5.0/lubridate/man/int_flip.Rd          |   21 
 lubridate-1.5.0/lubridate/man/int_length.Rd        |   17 
 lubridate-1.5.0/lubridate/man/int_overlaps.Rd      |   19 
 lubridate-1.5.0/lubridate/man/int_shift.Rd         |   26 -
 lubridate-1.5.0/lubridate/man/int_standardize.Rd   |   12 
 lubridate-1.5.0/lubridate/man/int_start.Rd         |   20 
 lubridate-1.5.0/lubridate/man/interval.Rd          |only
 lubridate-1.5.0/lubridate/man/is.Date.Rd           |   13 
 lubridate-1.5.0/lubridate/man/is.POSIXt.Rd         |   14 
 lubridate-1.5.0/lubridate/man/is.difftime.Rd       |   16 
 lubridate-1.5.0/lubridate/man/is.instant.Rd        |   17 
 lubridate-1.5.0/lubridate/man/is.timespan.Rd       |   15 
 lubridate-1.5.0/lubridate/man/lakers.Rd            |   22 -
 lubridate-1.5.0/lubridate/man/leap_year.Rd         |   15 
 lubridate-1.5.0/lubridate/man/lubridate-package.Rd |only
 lubridate-1.5.0/lubridate/man/make_difftime.Rd     |   54 ++
 lubridate-1.5.0/lubridate/man/minute.Rd            |   15 
 lubridate-1.5.0/lubridate/man/month.Rd             |   40 -
 lubridate-1.5.0/lubridate/man/mplus.Rd             |   75 ++-
 lubridate-1.5.0/lubridate/man/ms.Rd                |   33 -
 lubridate-1.5.0/lubridate/man/new_epoch.Rd         |   17 
 lubridate-1.5.0/lubridate/man/now.Rd               |   19 
 lubridate-1.5.0/lubridate/man/olson_time_zones.Rd  |   22 -
 lubridate-1.5.0/lubridate/man/origin.Rd            |   13 
 lubridate-1.5.0/lubridate/man/parse_date_time.Rd   |  357 ++++++++--------
 lubridate-1.5.0/lubridate/man/period.Rd            |   92 ++--
 lubridate-1.5.0/lubridate/man/period_to_seconds.Rd |   21 
 lubridate-1.5.0/lubridate/man/pretty_dates.Rd      |   32 -
 lubridate-1.5.0/lubridate/man/quarter.Rd           |   26 -
 lubridate-1.5.0/lubridate/man/quick_durations.Rd   |only
 lubridate-1.5.0/lubridate/man/quick_epochs.Rd      |only
 lubridate-1.5.0/lubridate/man/quick_periods.Rd     |only
 lubridate-1.5.0/lubridate/man/reclass_date.Rd      |    6 
 lubridate-1.5.0/lubridate/man/reclass_timespan.Rd  |   11 
 lubridate-1.5.0/lubridate/man/rollback.Rd          |   50 +-
 lubridate-1.5.0/lubridate/man/round_date.Rd        |   90 +++-
 lubridate-1.5.0/lubridate/man/second.Rd            |   15 
 lubridate-1.5.0/lubridate/man/stamp.Rd             |   85 +--
 lubridate-1.5.0/lubridate/man/time_length.Rd       |only
 lubridate-1.5.0/lubridate/man/timespan.Rd          |  135 ++----
 lubridate-1.5.0/lubridate/man/today.Rd             |   14 
 lubridate-1.5.0/lubridate/man/tz.Rd                |   65 +--
 lubridate-1.5.0/lubridate/man/week.Rd              |   33 -
 lubridate-1.5.0/lubridate/man/with_tz.Rd           |   29 -
 lubridate-1.5.0/lubridate/man/within-interval.Rd   |   20 
 lubridate-1.5.0/lubridate/man/year.Rd              |   26 -
 lubridate-1.5.0/lubridate/man/ymd.Rd               |   83 +--
 lubridate-1.5.0/lubridate/man/ymd_hms.Rd           |   85 +--
 lubridate-1.5.0/lubridate/src/tparse.c             |  138 +++---
 lubridate-1.5.0/lubridate/tests/testthat           |only
 lubridate-1.5.0/lubridate/tests/testthat.R         |only
 lubridate-1.5.0/lubridate/vignettes/lubridate.Rmd  |    8 
 142 files changed, 3605 insertions(+), 3141 deletions(-)

More information about lubridate at CRAN
Permanent link

Package georob updated to version 0.2-2 with previous version 0.2-1 dated 2015-09-02

Title: Robust Geostatistical Analysis of Spatial Data
Description: The georob package provides functions for efficiently fitting linear models with spatially correlated errors by robust and Gaussian (Restricted) Maximum Likelihood and for computing robust and customary point and block external-drift kriging predictions, along with utility functions for variogram modelling in ad-hoc geostatistical analyses, model building, model evaluation by cross-validation and for unbiased back-transformation of kriging predictions of log-transformed data.
Author: Andreas Papritz [cre, aut], Cornelia Schwierz [ctb]
Maintainer: Andreas Papritz <andreas.papritz@env.ethz.ch>

Diff between georob versions 0.2-1 dated 2015-09-02 and 0.2-2 dated 2015-12-02

 ChangeLog                     |   12 +
 DESCRIPTION                   |   10 
 MD5                           |   47 ++--
 NAMESPACE                     |   10 
 NEWS                          |    2 
 R/georob.S3methods.R          |    2 
 R/georob.cv.R                 |  158 +++++++++-----
 R/georob.exported.functions.R |   86 ++++++--
 R/georob.predict.R            |  136 +++++++-----
 R/georob.private.functions.R  |   76 +++++--
 R/variogram.R                 |  447 ++++++++++++++++++++++++++++++++++--------
 man/S3methods.georob.Rd       |   10 
 man/compress.Rd               |    4 
 man/control.georob.Rd         |   20 -
 man/cv.georob.Rd              |   10 
 man/fit.variogram.model.Rd    |   62 ++---
 man/georob.Rd                 |  123 ++++++-----
 man/georobModelBuilding.Rd    |    2 
 man/lgnpp.Rd                  |    6 
 man/param.defaults.Rd         |only
 man/plot.georob.Rd            |   81 +++++--
 man/predict.georob.Rd         |    6 
 man/profilelogLik.Rd          |   15 -
 man/sample.variogram.Rd       |   72 +++++-
 man/validate.predictions.Rd   |   27 +-
 25 files changed, 991 insertions(+), 433 deletions(-)

More information about georob at CRAN
Permanent link

Package bapred updated to version 0.2 with previous version 0.1 dated 2015-09-04

Title: Batch Effect Removal (in Phenotype Prediction using Gene Data)
Description: Various tools dealing with batch effects, in particular enabling the removal of discrepancies between training and test sets in prediction scenarios. The following batch effect removal methods are implemented: FAbatch, ComBat, (f)SVA, mean-centering, standardization, Ratio-A and Ratio-G. For each of these we provide an additional function which enables a posteriori ('addon') batch effect removal in independent batches ('test data'). Here, the (already batch effect adjusted) training data is not altered. For evaluating the success of batch effect adjustment several metrics are provided. Moreover, the package implements a plot for the visualization of batch effects using principal component analysis. The main functions of the package are ba() and baaddon() which enable batch effect removal and addon batch effect removal, respectively, with one of the seven methods mentioned above. Another important function is bametric() which is a wrapper function for all implemented methods for evaluating the success of batch effect removal.
Author: Roman Hornung, David Causeur
Maintainer: Roman Hornung <hornung@ibe.med.uni-muenchen.de>

Diff between bapred versions 0.1 dated 2015-09-04 and 0.2 dated 2015-12-02

 DESCRIPTION    |    6 +++---
 MD5            |    6 +++---
 R/svaba.R      |   41 ++++++++++++++++++++++++++++-------------
 R/svabaaddon.R |   12 ++++++++----
 4 files changed, 42 insertions(+), 23 deletions(-)

More information about bapred at CRAN
Permanent link

New package svdvis with initial version 0.1
Package: svdvis
Type: Package
Title: Singular Value Decomposition Visualization
Version: 0.1
Date: 2015-12-02
Author: Neo Christopher Chung
Maintainer: Neo Christopher Chung <nchchung@gmail.com>
Description: Visualize singular value decompositions (SVD), principal component analysis (PCA), factor analysis (FA) and related methods.
Imports: ggplot2, GGally, gridExtra, scales, reshape2, RColorBrewer, grDevices
License: GPL-2
LazyData: TRUE
RoxygenNote: 5.0.0
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2015-12-02 14:28:21 UTC; nc
Repository: CRAN
Date/Publication: 2015-12-02 17:54:19

More information about svdvis at CRAN
Permanent link

New package RODBCDBI with initial version 0.1
Package: RODBCDBI
Type: Package
Version: 0.1
Title: Provides Access to Databases Through the ODBC Interface
Author: teramonagi
Maintainer: Nagi Teramo <teramonagi@gmail.com>
Description: An implementation of R's DBI interface using ODBC package as a back-end. This allows R to connect to any DBMS that has a ODBC driver.
License: MIT + file LICENSE
Imports: methods, DBI, RODBC
Suggests: testthat
Collate: 'RODBCDBI.R' 'ODBCConnection.R' 'ODBCDriver.R' 'ODBCResult.R'
NeedsCompilation: no
Packaged: 2015-12-02 14:11:13 UTC; stakaya
Repository: CRAN
Date/Publication: 2015-12-02 17:54:16

More information about RODBCDBI at CRAN
Permanent link

Package pnea updated to version 1.2.1 with previous version 1.2.0 dated 2015-11-23

Title: Parametric Network Enrichment Analysis
Description: Includes functions and examples for Parametric Network Enrichment Analysis.
Author: Mirko Signorelli, Veronica Vinciotti and Ernst C. Wit
Maintainer: Mirko Signorelli <m.signorelli@rug.nl>

Diff between pnea versions 1.2.0 dated 2015-11-23 and 1.2.1 dated 2015-12-02

 DESCRIPTION |   10 +++++-----
 MD5         |    6 +++---
 R/pnea.R    |   10 ++++++++--
 man/pnea.Rd |   10 +++-------
 4 files changed, 19 insertions(+), 17 deletions(-)

More information about pnea at CRAN
Permanent link

New package LW1949 with initial version 1.0.0
Package: LW1949
Version: 1.0.0
Date: 2015-12-01
Title: An Automated Approach to Evaluating Dose-Effect Experiments Following Litchfield and Wilcoxon (1949)
Authors@R: person(given="Jean V.", family="Adams", email="jvadams@usgs.gov", role=c("aut", "cre"))
Author: Jean V. Adams [aut, cre]
Maintainer: Jean V. Adams <jvadams@usgs.gov>
Depends: R (>= 3.2.2)
Imports: MASS, mgcv, plotrix, tcltk, grDevices, graphics, stats, utils
Suggests: magrittr, testthat, knitr
Description: The manual approach of Litchfield and Wilcoxon (1949) <http://jpet.aspetjournals.org/content/96/2/99.abstract> for evaluating dose-effect experiments is automated so that the computer can do the work.
License: GPL
URL: https://github.com/JVAdams/LW1949
BugReports: https://github.com/JVAdams/LW1949/issues
LazyData: TRUE
VignetteBuilder: knitr
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2015-12-02 14:33:26 UTC; jvadams
Repository: CRAN
Date/Publication: 2015-12-02 17:54:14

More information about LW1949 at CRAN
Permanent link

New package kriens with initial version 0.1
Package: kriens
Type: Package
Title: Continuation Passing Style Development
Version: 0.1
Date: 2015-11-30
Author: Matteo Provenzano
Maintainer: Matteo Provenzano <matteo.provenzano@alephdue.com>
Description: Provides basic functions for Continuation-Passing Style development.
License: BSD_3_clause + file LICENSE
URL: http://www.alephdue.com
LazyData: TRUE
Suggests: testthat
NeedsCompilation: no
Packaged: 2015-12-02 13:54:21 UTC; matteo
Repository: CRAN
Date/Publication: 2015-12-02 15:10:26

More information about kriens at CRAN
Permanent link

Package RcppCCTZ updated to version 0.0.2 with previous version 0.0.1 dated 2015-12-01

Title: 'Rcpp' Bindings for the 'CCTZ' Library
Description: 'Rcpp' Access to the 'CCTZ' timezone library is provided. 'CCTZ' is a C++ library for translating between absolute and civil times using the rules of a time zone. The 'CCTZ' source code, released under the Apache 2.0 License, is included in this package. See <https://github.com/google/cctz> for more details.
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel <edd@debian.org>

Diff between RcppCCTZ versions 0.0.1 dated 2015-12-01 and 0.0.2 dated 2015-12-02

 ChangeLog                    |   11 +++++++++++
 DESCRIPTION                  |    8 ++++----
 MD5                          |   13 +++++++------
 README.md                    |    6 ++++--
 inst/NEWS.Rd                 |only
 inst/include/src/cctz_libc.h |    4 ++++
 src/cctz_if.cc               |    4 +++-
 src/cctz_libc.cc             |    4 ++++
 8 files changed, 37 insertions(+), 13 deletions(-)

More information about RcppCCTZ at CRAN
Permanent link

New package QCSIS with initial version 0.1
Package: QCSIS
Type: Package
Title: Sure Independence Screening via Quantile Correlation and Composite Quantile Correlation
Version: 0.1
Date: 2015-12-02
Author: Xuejun Ma, Jingxiao Zhang, Jingke Zhou
Maintainer: Xuejun Ma <yinuoyumi@163.com>
Description: Quantile correlation-sure independence screening (QC-SIS) and composite quantile correlation-sure independence screening (CQC-SIS) for ultrahigh-dimensional data.
License: GPL-2
URL: http://www.r-project.org
NeedsCompilation: no
Packaged: 2015-12-02 11:38:00 UTC; yinuo
Repository: CRAN
Date/Publication: 2015-12-02 14:22:26

More information about QCSIS at CRAN
Permanent link

New package properties with initial version 0.0-8
Package: properties
Type: Package
Title: Parse Java Properties Files for R Service Bus Applications
Version: 0.0-8
Date: 2015-12-02
Author: Tobias Verbeke, based on read.dcf by R Core Development Team
Maintainer: Tobias Verbeke <tobias.verbeke@openanalytics.eu>
Description: The properties package allows to parse Java properties files in the context of R Service Bus applications.
URL: http://www.openanalytics.eu/r-service-bus
License: GPL-2
Collate: 'read.properties.R'
NeedsCompilation: no
Packaged: 2015-12-02 11:03:19 UTC; tverbeke
Repository: CRAN
Date/Publication: 2015-12-02 14:22:33

More information about properties at CRAN
Permanent link

Package PowerTOST updated to version 1.3-02 with previous version 1.3-01 dated 2015-09-30

Title: Power and Sample Size Based on Two One-Sided t-Tests (TOST) for (Bio)Equivalence Studies
Description: Contains functions to calculate power and sample size for various study designs used for bioequivalence studies. See function known.designs() for study designs covered. Moreover the package contains functions for power and sample size based on 'expected' power in case of uncertain (estimated) variability. ----- Added are functions for the power and sample size for the ratio of two means with normally distributed data on the original scale (based on Fieller's confidence ('fiducial') interval). ----- Contains further functions for power and sample size calculations based on non-inferiority t-test. This is not a TOST procedure but eventually useful if the question of 'non-superiority' must be evaluated. The power and sample size calculations based on non-inferiority test may also performed via 'expected' power in case of uncertain (estimated) variability. ----- Contains functions power.scABEL() and sampleN.scABEL() to calculate power and sample size for the BE decision via scaled (widened) BE acceptance limits (EMA recommended) based on simulations. Contains further functions power.RSABE() and sampleN.RSABE() to calculate power and sample size for the BE decision via reference scaled ABE criterion according to the FDA procedure based on simulations. Contains further functions power.NTIDFDA() and sampleN.NTIDFDA() to calculate power and sample size for the BE decision via the FDA procedure for NTID's based on simulations. Contains further functions power.HVNTID() and sampleN.HVNTID() to calculate power and sample size for the BE decision via the FDA procedure for highly variable NTID's (see FDA Dabigatran / rivaroxaban guidances) ----- Contains functions for power analysis of a sample size plan for ABE (pa.ABE()), scaled ABE (pa.scABE()) and scaled ABE for NTID's (pa.NTIDFDA()) analysing power if deviating from assumptions of the plan. ----- Contains further functions for power calculations / sample size estimation for dose proportionality studies using the Power model.
Author: Detlew Labes [aut, cre], Helmut Schuetz [aut], Benjamin Lang [aut]
Maintainer: Detlew Labes <DetlewLabes@gmx.de>

Diff between PowerTOST versions 1.3-01 dated 2015-09-30 and 1.3-02 dated 2015-12-02

 DESCRIPTION             |   13 +++++++------
 MD5                     |   21 ++++++++++++++-------
 NAMESPACE               |    5 ++++-
 NEWS                    |    4 ++++
 R/SampleSize.R          |    8 ++++----
 R/power_RSABE_pure.R    |only
 R/power_scABEL.R        |    4 ++--
 R/power_scABEL_pure.R   |only
 R/power_type1_2TOST.R   |only
 R/sampleN_2TOST.R       |only
 man/power.2TOST.Rd      |only
 man/power.NTIDFDA.Rd    |   19 ++++++++++++++++++-
 man/sampleN.2TOST.Rd    |only
 man/sampleN.NTIDFDA.Rd  |   14 +++++++++++++-
 man/type1error.2TOST.Rd |only
 15 files changed, 66 insertions(+), 22 deletions(-)

More information about PowerTOST at CRAN
Permanent link

New package OData with initial version 0.3
Package: OData
Type: Package
Title: R Helper for OData Web Services
Version: 0.3
Imports: XML, RJSONIO, utils
Date: 2015-11-23
Author: Patrick Beaucamp, Kevin Monnery, Sebastien Vigroux, BPM-Conseil
Maintainer: Sebastien Vigroux <sebastien.vigroux@bpm-conseil.com>
Description: Helper methods for accessing data from web service based on OData Protocol. It provides several helper methods to access the service metadata, the data from datasets and to download some file resources (it only support CSV for now). For more information about OData go to http://www.odata.org/documentation/.
License: GPL-2
LazyData: TRUE
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2015-12-02 10:09:24 UTC; svi
Repository: CRAN
Date/Publication: 2015-12-02 14:22:21

More information about OData at CRAN
Permanent link

Package meta updated to version 4.3-2 with previous version 4.3-1 dated 2015-11-16

Title: General Package for Meta-Analysis
Description: User-friendly general package providing standard methods for meta-analysis: - fixed effect and random effects meta-analysis; - several plots (forest, funnel, Galbraith / radial, L'Abbe, Baujat, bubble); - statistical tests and trim-and-fill method to evaluate bias in meta-analysis; - import data from RevMan 5; - prediction interval, Hartung-Knapp and Paule-Mandel method for random effects model; - cumulative meta-analysis and leave-one-out meta-analysis; - meta-regression (if R package 'metafor' is installed).
Author: Guido Schwarzer [cre, aut]
Maintainer: Guido Schwarzer <sc@imbi.uni-freiburg.de>

Diff between meta versions 4.3-1 dated 2015-11-16 and 4.3-2 dated 2015-12-02

 DESCRIPTION  |    8 ++++----
 MD5          |    8 ++++----
 NEWS         |   12 ++++++++++++
 R/metacont.R |   12 ++++--------
 R/metaprop.R |    2 +-
 5 files changed, 25 insertions(+), 17 deletions(-)

More information about meta at CRAN
Permanent link

Package HelpersMG updated to version 1.3.2 with previous version 1.2.3 dated 2015-10-09

Title: Tools for Earth Meteorological Analysis
Description: Contains many functions useful for managing 'NetCDF' files (see http://en.wikipedia.org/wiki/NetCDF), get tide levels on any point of the globe, get moon phase and time for sun rise and fall, analyse and reconstruct periodic time series of temperature with irregular sinusoidal pattern, show scales and wind rose in plot with change of color of text, Metropolis-Hastings algorithm for Bayesian MCMC analysis, plot graphs or boxplot with error bars, search files in disk by there names or their content, read the contents of all files from a folder at one time.
Author: Marc Girondot
Maintainer: Marc Girondot <marc.girondot@u-psud.fr>

Diff between HelpersMG versions 1.2.3 dated 2015-10-09 and 1.3.2 dated 2015-12-02

 HelpersMG-1.2.3/HelpersMG/R/compassRose2.R             |only
 HelpersMG-1.2.3/HelpersMG/R/map.scale2.R               |only
 HelpersMG-1.2.3/HelpersMG/man/compassRose2.Rd          |only
 HelpersMG-1.2.3/HelpersMG/man/map.scale2.Rd            |only
 HelpersMG-1.3.2/HelpersMG/DESCRIPTION                  |   10 -
 HelpersMG-1.3.2/HelpersMG/MD5                          |   96 ++++++++---------
 HelpersMG-1.3.2/HelpersMG/NAMESPACE                    |    6 -
 HelpersMG-1.3.2/HelpersMG/NEWS                         |    7 +
 HelpersMG-1.3.2/HelpersMG/R/BinomialConfidence.R       |    2 
 HelpersMG-1.3.2/HelpersMG/R/HelpersMG-package.R        |    4 
 HelpersMG-1.3.2/HelpersMG/R/MHalgoGen.R                |   29 ++---
 HelpersMG-1.3.2/HelpersMG/R/ind_long_lat.R             |   31 ++---
 HelpersMG-1.3.2/HelpersMG/R/local.search.R             |    2 
 HelpersMG-1.3.2/HelpersMG/R/newcompassRose.R           |only
 HelpersMG-1.3.2/HelpersMG/R/newmap.scale.R             |only
 HelpersMG-1.3.2/HelpersMG/R/plot.mcmcComposite.R       |    7 -
 HelpersMG-1.3.2/HelpersMG/R/similar.R                  |    2 
 HelpersMG-1.3.2/HelpersMG/R/wget.R                     |    2 
 HelpersMG-1.3.2/HelpersMG/man/ChangeCoordinate.Rd      |    2 
 HelpersMG-1.3.2/HelpersMG/man/HelpersMG-package.Rd     |   38 +++---
 HelpersMG-1.3.2/HelpersMG/man/LD50.Rd                  |    6 -
 HelpersMG-1.3.2/HelpersMG/man/MHalgoGen.Rd             |   28 ++--
 HelpersMG-1.3.2/HelpersMG/man/ScalePreviousPlot.Rd     |   10 -
 HelpersMG-1.3.2/HelpersMG/man/as.mcmc.mcmcComposite.Rd |   26 ++--
 HelpersMG-1.3.2/HelpersMG/man/as.parameters.Rd         |   26 ++--
 HelpersMG-1.3.2/HelpersMG/man/asc.Rd                   |    2 
 HelpersMG-1.3.2/HelpersMG/man/barplot_errbar.Rd        |   22 +--
 HelpersMG-1.3.2/HelpersMG/man/chr.Rd                   |    2 
 HelpersMG-1.3.2/HelpersMG/man/clean.knitr.Rd           |    4 
 HelpersMG-1.3.2/HelpersMG/man/compare_AIC.Rd           |    2 
 HelpersMG-1.3.2/HelpersMG/man/convert.tz.Rd            |    2 
 HelpersMG-1.3.2/HelpersMG/man/growlnotify.Rd           |    2 
 HelpersMG-1.3.2/HelpersMG/man/ind_long_lat.Rd          |   11 +
 HelpersMG-1.3.2/HelpersMG/man/index.periodic.Rd        |   20 +--
 HelpersMG-1.3.2/HelpersMG/man/inside.search.Rd         |    2 
 HelpersMG-1.3.2/HelpersMG/man/local.search.Rd          |    4 
 HelpersMG-1.3.2/HelpersMG/man/logLik.LD50.Rd           |    6 -
 HelpersMG-1.3.2/HelpersMG/man/merge.mcmcComposite.Rd   |   28 ++--
 HelpersMG-1.3.2/HelpersMG/man/minmax.periodic.Rd       |   22 +--
 HelpersMG-1.3.2/HelpersMG/man/moon.info.Rd             |   14 +-
 HelpersMG-1.3.2/HelpersMG/man/newcompassRose.Rd        |only
 HelpersMG-1.3.2/HelpersMG/man/newmap.scale.Rd          |only
 HelpersMG-1.3.2/HelpersMG/man/plot.LD50.Rd             |    6 -
 HelpersMG-1.3.2/HelpersMG/man/plot.mcmcComposite.Rd    |   26 ++--
 HelpersMG-1.3.2/HelpersMG/man/plot_add.Rd              |    8 -
 HelpersMG-1.3.2/HelpersMG/man/plot_errbar.Rd           |   26 ++--
 HelpersMG-1.3.2/HelpersMG/man/predict.LD50.Rd          |    6 -
 HelpersMG-1.3.2/HelpersMG/man/read_folder.Rd           |    2 
 HelpersMG-1.3.2/HelpersMG/man/similar.Rd               |    2 
 HelpersMG-1.3.2/HelpersMG/man/summary.mcmcComposite.Rd |   26 ++--
 HelpersMG-1.3.2/HelpersMG/man/sun.info.Rd              |   10 -
 HelpersMG-1.3.2/HelpersMG/man/tide.info.Rd             |   10 -
 HelpersMG-1.3.2/HelpersMG/man/wget.Rd                  |    4 
 53 files changed, 304 insertions(+), 299 deletions(-)

More information about HelpersMG at CRAN
Permanent link

Package gsl updated to version 1.9-10.1 with previous version 1.9-10 dated 2013-12-10

Title: wrapper for the Gnu Scientific Library
Description: An R wrapper for the special functions and quasi random number generators of the Gnu Scientific Library (http://www.gnu.org/software/gsl/). See gsl-package.Rd for details of overall package organization, and Misc.Rd for some functions that are widely used in the package, and some tips on installation.
Author: Robin K. S. Hankin; qrng functions by Duncan Murdoch and multimin by Andrew Clausen
Maintainer: Robin K. S. Hankin <hankin.robin@gmail.com>

Diff between gsl versions 1.9-10 dated 2013-12-10 and 1.9-10.1 dated 2015-12-02

 DESCRIPTION    |    8 ++++----
 MD5            |   10 +++++-----
 configure      |    2 +-
 configure.ac   |    2 +-
 src/ellint.c   |    5 +++++
 src/legendre.c |    6 ++++++
 6 files changed, 22 insertions(+), 11 deletions(-)

More information about gsl at CRAN
Permanent link

Package ZeligChoice updated to version 0.9-0 with previous version 0.8-1 dated 2013-09-23

Title: Zelig Choice Models
Description: Add-on package for Zelig 5. Enables the use of a variety of logit and probit regressions.
Author: Christine Choirat, James Honaker, Kosuke Imai, Gary King, Olivia Lau
Maintainer: James Honaker <zelig-zee@iq.harvard.edu>

Diff between ZeligChoice versions 0.8-1 dated 2013-09-23 and 0.9-0 dated 2015-12-02

 ZeligChoice-0.8-1/ZeligChoice/R/ZeligChoice-package.R       |only
 ZeligChoice-0.8-1/ZeligChoice/R/blogit.R                    |only
 ZeligChoice-0.8-1/ZeligChoice/R/bprobit.R                   |only
 ZeligChoice-0.8-1/ZeligChoice/R/common-methods.R            |only
 ZeligChoice-0.8-1/ZeligChoice/R/describe.R                  |only
 ZeligChoice-0.8-1/ZeligChoice/R/param.blogit.R              |only
 ZeligChoice-0.8-1/ZeligChoice/R/param.bprobit.R             |only
 ZeligChoice-0.8-1/ZeligChoice/R/param.mlogit.R              |only
 ZeligChoice-0.8-1/ZeligChoice/R/param.ologit.R              |only
 ZeligChoice-0.8-1/ZeligChoice/R/param.oprobit.R             |only
 ZeligChoice-0.8-1/ZeligChoice/R/plot.sim.blogit.R           |only
 ZeligChoice-0.8-1/ZeligChoice/R/plot.sim.bprobit.R          |only
 ZeligChoice-0.8-1/ZeligChoice/R/plot.sim.mlogit.R           |only
 ZeligChoice-0.8-1/ZeligChoice/R/plot.sim.ologit.R           |only
 ZeligChoice-0.8-1/ZeligChoice/R/plot.sim.oprobit.R          |only
 ZeligChoice-0.8-1/ZeligChoice/R/qi.blogit.R                 |only
 ZeligChoice-0.8-1/ZeligChoice/R/qi.bprobit.R                |only
 ZeligChoice-0.8-1/ZeligChoice/R/qi.mlogit.R                 |only
 ZeligChoice-0.8-1/ZeligChoice/R/qi.ologit.R                 |only
 ZeligChoice-0.8-1/ZeligChoice/R/qi.oprobit.R                |only
 ZeligChoice-0.8-1/ZeligChoice/R/summarize.ologit.R          |only
 ZeligChoice-0.8-1/ZeligChoice/R/summarize.oprobit.R         |only
 ZeligChoice-0.8-1/ZeligChoice/R/zelig2blogit.R              |only
 ZeligChoice-0.8-1/ZeligChoice/R/zelig2bprobit.R             |only
 ZeligChoice-0.8-1/ZeligChoice/R/zelig2mlogit.R              |only
 ZeligChoice-0.8-1/ZeligChoice/R/zelig2ologit.R              |only
 ZeligChoice-0.8-1/ZeligChoice/R/zelig2oprobit.R             |only
 ZeligChoice-0.8-1/ZeligChoice/build                         |only
 ZeligChoice-0.8-1/ZeligChoice/demo/blogit.R                 |only
 ZeligChoice-0.8-1/ZeligChoice/demo/bprobit.R                |only
 ZeligChoice-0.8-1/ZeligChoice/demo/mlogit.R                 |only
 ZeligChoice-0.8-1/ZeligChoice/demo/ologit.R                 |only
 ZeligChoice-0.8-1/ZeligChoice/demo/oprobit.R                |only
 ZeligChoice-0.8-1/ZeligChoice/inst/doc                      |only
 ZeligChoice-0.8-1/ZeligChoice/man/ZeligChoice-package.R.Rd  |only
 ZeligChoice-0.8-1/ZeligChoice/man/blogit.Rd                 |only
 ZeligChoice-0.8-1/ZeligChoice/man/bprobit.Rd                |only
 ZeligChoice-0.8-1/ZeligChoice/man/describe.blogit.Rd        |only
 ZeligChoice-0.8-1/ZeligChoice/man/describe.bprobit.Rd       |only
 ZeligChoice-0.8-1/ZeligChoice/man/describe.mlogit.Rd        |only
 ZeligChoice-0.8-1/ZeligChoice/man/summarize.ologit.Rd       |only
 ZeligChoice-0.8-1/ZeligChoice/man/summarize.oprobit.Rd      |only
 ZeligChoice-0.8-1/ZeligChoice/man/zelig2blogit.Rd           |only
 ZeligChoice-0.8-1/ZeligChoice/man/zelig2bprobit.Rd          |only
 ZeligChoice-0.8-1/ZeligChoice/man/zelig2mlogit.Rd           |only
 ZeligChoice-0.8-1/ZeligChoice/man/zelig2ologit.Rd           |only
 ZeligChoice-0.8-1/ZeligChoice/man/zelig2oprobit.Rd          |only
 ZeligChoice-0.8-1/ZeligChoice/tests/tests.R                 |only
 ZeligChoice-0.8-1/ZeligChoice/vignettes                     |only
 ZeligChoice-0.9-0/ZeligChoice/DESCRIPTION                   |   30 +---
 ZeligChoice-0.9-0/ZeligChoice/MD5                           |   89 ++++--------
 ZeligChoice-0.9-0/ZeligChoice/NAMESPACE                     |   54 ++-----
 ZeligChoice-0.9-0/ZeligChoice/R/create-json.R               |only
 ZeligChoice-0.9-0/ZeligChoice/R/model-bbinchoice.R          |only
 ZeligChoice-0.9-0/ZeligChoice/R/model-blogit.R              |only
 ZeligChoice-0.9-0/ZeligChoice/R/model-bprobit.R             |only
 ZeligChoice-0.9-0/ZeligChoice/R/model-mlogit.R              |only
 ZeligChoice-0.9-0/ZeligChoice/R/model-obinchoice.R          |only
 ZeligChoice-0.9-0/ZeligChoice/R/model-ologit.R              |only
 ZeligChoice-0.9-0/ZeligChoice/R/model-oprobit.R             |only
 ZeligChoice-0.9-0/ZeligChoice/demo/00Index                  |   10 -
 ZeligChoice-0.9-0/ZeligChoice/demo/demo-blogit.R            |only
 ZeligChoice-0.9-0/ZeligChoice/demo/demo-bprobit.R           |only
 ZeligChoice-0.9-0/ZeligChoice/demo/demo-mlogit.R            |only
 ZeligChoice-0.9-0/ZeligChoice/demo/demo-ologit.R            |only
 ZeligChoice-0.9-0/ZeligChoice/demo/demo-oprobit.R           |only
 ZeligChoice-0.9-0/ZeligChoice/inst/JSON                     |only
 ZeligChoice-0.9-0/ZeligChoice/man/Zelig-bbinchoice-class.Rd |only
 ZeligChoice-0.9-0/ZeligChoice/man/Zelig-blogit-class.Rd     |only
 ZeligChoice-0.9-0/ZeligChoice/man/Zelig-bprobit-class.Rd    |only
 ZeligChoice-0.9-0/ZeligChoice/man/Zelig-mlogit-class.Rd     |only
 ZeligChoice-0.9-0/ZeligChoice/man/Zelig-obinchoice-class.Rd |only
 ZeligChoice-0.9-0/ZeligChoice/man/Zelig-ologit-class.Rd     |only
 ZeligChoice-0.9-0/ZeligChoice/man/Zelig-oprobit-class.Rd    |only
 ZeligChoice-0.9-0/ZeligChoice/man/construct.v.Rd            |only
 ZeligChoice-0.9-0/ZeligChoice/man/createJSONzeligchoice.Rd  |only
 ZeligChoice-0.9-0/ZeligChoice/man/ev.mlogit.Rd              |only
 ZeligChoice-0.9-0/ZeligChoice/man/pv.mlogit.Rd              |only
 ZeligChoice-0.9-0/ZeligChoice/tests/testthat                |only
 ZeligChoice-0.9-0/ZeligChoice/tests/testthat.R              |only
 80 files changed, 67 insertions(+), 116 deletions(-)

More information about ZeligChoice at CRAN
Permanent link

New package wakefield with initial version 0.2.0
Package: wakefield
Title: Generate Random Data Sets
Version: 0.2.0
Authors@R: c(person("Tyler", "Rinker", email = "tyler.rinker@gmail.com", role = c("aut", "cre")), person("Josh", "O'Brien", role = "ctb"), person("Ananda", "Mahto", role = "ctb"), person("MAtthew", "Sigal", role = "ctb"))
Maintainer: Tyler Rinker <tyler.rinker@gmail.com>
Description: Generates random data sets including: data.frames, lists, and vectors.
Depends: R (>= 3.1.2)
Imports: chron, ggplot2, dplyr, stringi
Suggests: testthat
Date: 2015-12-01
License: GPL-2
LazyData: TRUE
Collate: 'utils.R' 'r_sample.R' 'age.R' 'r_sample_factor.R' 'animal.R' 'r_sample_binary.R' 'answer.R' 'area.R' 'as_integer.R' 'car.R' 'children.R' 'coin.R' 'color.R' 'date_stamp.R' 'r_sample_logical.R' 'death.R' 'dice.R' 'dna.R' 'dob.R' 'dummy.R' 'education.R' 'employment.R' 'eye.R' 'grade.R' 'grade_level.R' 'group.R' 'hair.R' 'normal.R' 'height.R' 'hour.R' 'id.R' 'income.R' 'internet_browser.R' 'interval.R' 'iq.R' 'language.R' 'level.R' 'r_sample_ordered.R' 'likert.R' 'lorem_ipsum.R' 'marital.R' 'military.R' 'minute.R' 'month.R' 'wakefield-package.R' 'r_sample_replace.R' 'name.R' 'peek.R' 'political.R' 'probs.R' 'r_data.R' 'r_data_frame.R' 'r_dummy.R' 'seriesname.R' 'r_insert.R' 'r_list.R' 'r_na.R' 'r_sample_integer.R' 'r_series.R' 'race.R' 'relate.R' 'religion.R' 'sat.R' 'second.R' 'sentence.R' 'sex.R' 'sex_inclusive.R' 'smokes.R' 'speed.R' 'state.R' 'string.R' 'table_heat.R' 'time_stamp.R' 'upper.R' 'valid.R' 'variables.R' 'varname.R' 'year.R' 'zip_code.R'
NeedsCompilation: no
Packaged: 2015-12-02 03:38:45 UTC; Tyler
Author: Tyler Rinker [aut, cre], Josh O'Brien [ctb], Ananda Mahto [ctb], MAtthew Sigal [ctb]
Repository: CRAN
Date/Publication: 2015-12-02 09:17:23

More information about wakefield at CRAN
Permanent link

Package rvertnet updated to version 0.4.1 with previous version 0.4.0 dated 2015-11-26

Title: Search 'Vertnet', a 'Database' of Vertebrate Specimen Records
Description: Retrieve, map and summarize data from the 'VertNet.org' archives. Functions allow searching by many parameters, including 'taxonomic' names, places, and dates. In addition, there is an interface for conducting spatially delimited searches, and another for requesting large 'datasets' via email.
Author: Scott Chamberlain [aut, cre], Chris Ray [aut], Vijay Barve [aut]
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>

Diff between rvertnet versions 0.4.0 dated 2015-11-26 and 0.4.1 dated 2015-12-02

 DESCRIPTION                   |    6 +++---
 MD5                           |   20 +++++++++++---------
 R/bigsearch.R                 |   32 +++++++++++++++++---------------
 R/searchbyterm.R              |   14 +++++++-------
 R/vert_id.R                   |   12 +++++++-----
 R/vertmap.R                   |    3 ++-
 build/vignette.rds            |binary
 man/bigsearch.Rd              |    2 +-
 man/vert_id.Rd                |   13 +++++++++----
 tests/testthat/test-dump.R    |only
 tests/testthat/test-vert_id.R |only
 tests/testthat/test-vertmap.R |   14 ++++++++++++++
 12 files changed, 71 insertions(+), 45 deletions(-)

More information about rvertnet at CRAN
Permanent link

Package rnoaa updated to version 0.5.0 with previous version 0.4.2 dated 2015-07-07

Title: 'NOAA' Weather Data from R
Description: Client for many 'NOAA' data sources including the 'NCDC' climate 'API' at http://www.ncdc.noaa.gov/cdo-web/webservices/v2, with functions for each of the 'API' 'endpoints': data, data categories, data sets, data types, locations, location categories, and stations. In addition, we have an interface for 'NOAA' sea ice data, the 'NOAA' severe weather inventory, 'NOAA' Historical Observing 'Metadata' Repository ('HOMR') data, 'NOAA' storm data via 'IBTrACS', tornado data via the 'NOAA' storm prediction center, and more.
Author: Hart Edmund [ctb], Scott Chamberlain [aut, cre], Karthik Ram [ctb], Adam Erickson [ctb], Nicholas Potter [ctb]
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>

Diff between rnoaa versions 0.4.2 dated 2015-07-07 and 0.5.0 dated 2015-12-02

 DESCRIPTION                        |   31 +++--
 MD5                                |  154 +++++++++++++++-------------
 NAMESPACE                          |   26 ++++
 R/buoy.R                           |   78 +++++---------
 R/ersst.R                          |only
 R/gefs.R                           |only
 R/ghcnd.R                          |   39 +++++--
 R/homr_definitions.R               |    1 
 R/isd.R                            |  202 ++++++++++++++++++++++++++-----------
 R/isd_stations.R                   |only
 R/ncdc.r                           |    2 
 R/ncdc_plot.r                      |   38 +++---
 R/ncdc_stations.r                  |    1 
 R/rnoaa-package.r                  |   45 +++++---
 R/seaice.r                         |    5 
 R/swdi.r                           |    7 -
 R/zzz.r                            |   12 ++
 README.md                          |  191 +++++++++++++---------------------
 build/vignette.rds                 |binary
 inst/isd_stations.rds              |only
 inst/js/LICENSE-turf-buffer        |only
 inst/js/LICENSE-turf-extent        |only
 man/buoy.Rd                        |   17 ++-
 man/caching.Rd                     |    2 
 man/check_response.Rd              |    2 
 man/check_response_swdi.Rd         |    2 
 man/erddap_clear_cache-defunct.Rd  |    2 
 man/erddap_data-defunct.Rd         |    2 
 man/erddap_datasets-defunct.Rd     |    2 
 man/erddap_grid-defunct.Rd         |    2 
 man/erddap_info-defunct.Rd         |    2 
 man/erddap_search-defunct.Rd       |    2 
 man/erddap_table-defunct.Rd        |    2 
 man/ersst.Rd                       |only
 man/fipscodes.Rd                   |    2 
 man/gefs.Rd                        |only
 man/ghcnd.Rd                       |    4 
 man/homr.Rd                        |    4 
 man/homr_definitions.Rd            |    2 
 man/is.ncdc_data.Rd                |    2 
 man/isd.Rd                         |   63 +++++++++--
 man/isd_stations.Rd                |only
 man/ncdc.Rd                        |   16 +-
 man/ncdc_combine.Rd                |    2 
 man/ncdc_datacats.Rd               |    2 
 man/ncdc_datasets.Rd               |   14 +-
 man/ncdc_datatypes.Rd              |   16 +-
 man/ncdc_leg_data-defunct.Rd       |    2 
 man/ncdc_leg_site_info-defunct.Rd  |    2 
 man/ncdc_leg_sites-defunct.Rd      |    2 
 man/ncdc_leg_variables-defunct.Rd  |    2 
 man/ncdc_locs.Rd                   |    2 
 man/ncdc_locs_cats.Rd              |    2 
 man/ncdc_plot.Rd                   |    2 
 man/ncdc_stations.Rd               |   26 ++--
 man/ncdc_theme.Rd                  |    2 
 man/noaa-defunct.Rd                |    2 
 man/noaa_combine-defunct.Rd        |    2 
 man/noaa_datacats-defunct.Rd       |    2 
 man/noaa_datasets-defunct.Rd       |    2 
 man/noaa_datatypes-defunct.Rd      |    2 
 man/noaa_locs-defunct.Rd           |    2 
 man/noaa_locs_cats-defunct.Rd      |    2 
 man/noaa_plot-defunct.Rd           |    2 
 man/noaa_seaice-defunct.Rd         |    2 
 man/noaa_stations-defunct.Rd       |    2 
 man/readshpfile.Rd                 |    2 
 man/rnoaa-defunct.Rd               |    4 
 man/rnoaa-package.Rd               |   31 ++---
 man/seaice.Rd                      |    2 
 man/seaiceeurls.Rd                 |    2 
 man/storm_columns.Rd               |    2 
 man/storm_names.Rd                 |    2 
 man/storms.Rd                      |    2 
 man/swdi.Rd                        |    6 -
 man/theme_ice.Rd                   |    2 
 man/tornadoes.Rd                   |    2 
 man/type_summ.Rd                   |    2 
 tests/testthat/plot_data.Rds       |only
 tests/testthat/test-buoy.R         |   51 +++++++--
 tests/testthat/test-gefs.R         |only
 tests/testthat/test-isd.R          |   12 --
 tests/testthat/test-isd_stations.R |only
 tests/testthat/test-ncdc_plot.r    |   13 +-
 84 files changed, 687 insertions(+), 506 deletions(-)

More information about rnoaa at CRAN
Permanent link

Package mma updated to version 2.0-1 with previous version 2.0-0 dated 2015-04-24

Title: Multiple Mediation Analysis
Description: Used for general multiple mediation analysis. The analysis method is described in Yu et al. 2014, "General Multiple Mediation Analysis With an Application to Explore Racial Disparity in Breast Cancer Survival", published on Journal of Biometrics & Biostatistics, 5(2):189.
Author: Qingzhao Yu
Maintainer: Qingzhao Yu <qyu@lsuhsc.edu>

Diff between mma versions 2.0-0 dated 2015-04-24 and 2.0-1 dated 2015-12-02

 DESCRIPTION           |    8 ++++----
 MD5                   |   14 +++++++-------
 NAMESPACE             |    6 ++++++
 R/mma.r               |   37 +++++++++++++++++++++++++------------
 man/boot.med.binx.Rd  |   14 +++++++++-----
 man/boot.med.contx.Rd |    9 ++++++---
 man/mma-package.Rd    |    7 ++++---
 man/mma.Rd            |   19 ++++++++++++-------
 8 files changed, 73 insertions(+), 41 deletions(-)

More information about mma at CRAN
Permanent link

Package mixtox updated to version 1.2 with previous version 1.1 dated 2015-10-19

Title: Curve Fitting and Mixture Toxicity Assessment
Description: Curve Fitting for monotonic(sigmoidal) & non-monotonic(J-shaped) concentration-response data. Toxicity prediction of chemical mixtures using reference models such as 'concentration addition' and 'independent action' (Backhaus, T., Faust, M., Environmental Science and Technology. 2012, 46, 2564-2573. doi:10.1021/es2034125).
Author: Xiangwei Zhu
Maintainer: Xiangwei Zhu <xwzhunc@gmail.com>

Diff between mixtox versions 1.1 dated 2015-10-19 and 1.2 dated 2015-12-02

 DESCRIPTION           |   17 ++--
 MD5                   |   58 +++++++------
 NAMESPACE             |    2 
 R/CEx.R               |   36 +++++++-
 R/ECx.R               |   21 ++++-
 R/NOEC.R              |    3 
 R/curveFit.R          |  209 ++++++++++++++++++++++++++++++++++++++++----------
 R/ecaPred.R           |    7 +
 R/eiaPred.R           |    5 -
 R/gcaHill.R           |    4 
 R/gcaPred.R           |    7 +
 R/iaPred.R            |    5 -
 R/nmECx.R             |only
 R/showEq.R            |   45 ++++++++--
 data/antibiotox.rda   |only
 data/hormesis.rda     |only
 man/CEx.Rd            |   43 +++-------
 man/ECx.Rd            |   49 ++++++-----
 man/NOEC.Rd           |    8 -
 man/antibiotox.Rd     |only
 man/caPred.Rd         |   17 +---
 man/curveFit.Rd       |  199 +++++++++++++++++++++++++++++++++--------------
 man/cytotox.Rd        |   20 ++--
 man/ecaPred.Rd        |   19 ++--
 man/eiaPred.Rd        |   33 ++++++-
 man/gcaHill.Rd        |   25 +++--
 man/gcaPred.Rd        |   27 ++----
 man/hormesis.Rd       |only
 man/iaPred.Rd         |   38 ++++-----
 man/mixtox-package.Rd |   30 ++++---
 man/nmECx.Rd          |only
 man/showEq.Rd         |   49 +++++++----
 man/unidTab.Rd        |    2 
 33 files changed, 662 insertions(+), 316 deletions(-)

More information about mixtox at CRAN
Permanent link


Built and running on Debian GNU/Linux using R, littler and blosxom. Styled with Bootstrap.