Title: Data Exchange Between R and LabKey Server
Description: Allow a user to discover, query and modify data from a LabKey Server.
Author: Peter Hussey
Maintainer: Cory Nathe <cnathe@labkey.com>
Diff between Rlabkey versions 2.1.128 dated 2015-09-22 and 2.1.129 dated 2015-12-15
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ NEWS | 3 +++ R/labkey.selectRows.R | 10 ++++++++-- R/schemaObjects.R | 2 +- man/Rlabkey-package.Rd | 4 ++-- man/labkey.selectRows.Rd | 3 ++- 7 files changed, 26 insertions(+), 16 deletions(-)
Title: Just Let it Simmer
Description: Discrete-Event Simulation (DES) package for R.
Author: Bart Smeets [aut],
Iñaki Ucar [aut, cre]
Maintainer: Iñaki Ucar <i.ucar86@gmail.com>
Diff between simmer versions 3.0.1 dated 2015-11-17 and 3.1.0 dated 2015-12-15
simmer-3.0.1/simmer/src/entitiy.cpp |only simmer-3.0.1/simmer/src/simulator.cpp |only simmer-3.0.1/simmer/tests/testthat/test-activity.R |only simmer-3.0.1/simmer/tests/testthat/test-branch.R |only simmer-3.0.1/simmer/tests/testthat/test-generator.R |only simmer-3.0.1/simmer/tests/testthat/test-resource.R |only simmer-3.1.0/simmer/DESCRIPTION | 10 simmer-3.1.0/simmer/MD5 | 143 +++--- simmer-3.1.0/simmer/NAMESPACE | 10 simmer-3.1.0/simmer/R/RcppExports.R | 68 ++- simmer-3.1.0/simmer/R/activity.R |only simmer-3.1.0/simmer/R/convenience_funcs.R |only simmer-3.1.0/simmer/R/plot.R | 59 ++ simmer-3.1.0/simmer/R/simulator.R | 218 +++++++--- simmer-3.1.0/simmer/R/trajectory.R | 180 +++++--- simmer-3.1.0/simmer/R/utils.R | 12 simmer-3.1.0/simmer/R/wrap.R | 81 +++ simmer-3.1.0/simmer/TODO | 16 simmer-3.1.0/simmer/build/vignette.rds |binary simmer-3.1.0/simmer/inst/doc/introduction.R | 1 simmer-3.1.0/simmer/inst/doc/introduction.Rmd | 1 simmer-3.1.0/simmer/inst/doc/introduction.html | 60 +- simmer-3.1.0/simmer/inst/doc/terminology.R |only simmer-3.1.0/simmer/inst/doc/terminology.Rmd |only simmer-3.1.0/simmer/inst/doc/terminology.html |only simmer-3.1.0/simmer/inst/doc/trajectories.R |only simmer-3.1.0/simmer/inst/doc/trajectories.Rmd |only simmer-3.1.0/simmer/inst/doc/trajectories.html |only simmer-3.1.0/simmer/man/add_generator.Rd | 11 simmer-3.1.0/simmer/man/add_resource.Rd | 7 simmer-3.1.0/simmer/man/at.Rd |only simmer-3.1.0/simmer/man/branch.Rd | 13 simmer-3.1.0/simmer/man/create_trajectory.Rd | 9 simmer-3.1.0/simmer/man/from.Rd |only simmer-3.1.0/simmer/man/get_capacity.Rd | 7 simmer-3.1.0/simmer/man/get_head.Rd | 5 simmer-3.1.0/simmer/man/get_mon_arrivals.Rd | 7 simmer-3.1.0/simmer/man/get_mon_attributes.Rd |only simmer-3.1.0/simmer/man/get_mon_resources.Rd | 7 simmer-3.1.0/simmer/man/get_n_activities.Rd | 5 simmer-3.1.0/simmer/man/get_n_generated.Rd |only simmer-3.1.0/simmer/man/get_next_activity.Rd | 5 simmer-3.1.0/simmer/man/get_prev_activity.Rd |only simmer-3.1.0/simmer/man/get_queue_count.Rd | 7 simmer-3.1.0/simmer/man/get_queue_size.Rd | 7 simmer-3.1.0/simmer/man/get_server_count.Rd | 7 simmer-3.1.0/simmer/man/get_tail.Rd | 5 simmer-3.1.0/simmer/man/needs_attrs.Rd |only simmer-3.1.0/simmer/man/now.Rd | 5 simmer-3.1.0/simmer/man/onestep.Rd | 5 simmer-3.1.0/simmer/man/peek.Rd | 5 simmer-3.1.0/simmer/man/plot_attributes.Rd |only simmer-3.1.0/simmer/man/print_activity.Rd |only simmer-3.1.0/simmer/man/release.Rd | 7 simmer-3.1.0/simmer/man/reset.Rd | 5 simmer-3.1.0/simmer/man/rollback.Rd |only simmer-3.1.0/simmer/man/run.Rd | 5 simmer-3.1.0/simmer/man/seize.Rd | 9 simmer-3.1.0/simmer/man/set_attribute.Rd |only simmer-3.1.0/simmer/man/show_activity.Rd | 7 simmer-3.1.0/simmer/man/show_trajectory.Rd | 5 simmer-3.1.0/simmer/man/simmer.Rd | 5 simmer-3.1.0/simmer/man/timeout.Rd | 11 simmer-3.1.0/simmer/man/wrap.Rd | 5 simmer-3.1.0/simmer/src/Makevars |only simmer-3.1.0/simmer/src/RcppExports.cpp | 186 +++++++- simmer-3.1.0/simmer/src/activity.cpp | 138 ++++++ simmer-3.1.0/simmer/src/activity.h | 159 ++++--- simmer-3.1.0/simmer/src/entity.cpp |only simmer-3.1.0/simmer/src/entity.h | 210 +++++---- simmer-3.1.0/simmer/src/simmer.h |only simmer-3.1.0/simmer/src/simmer_rcpp.cpp | 153 +++++-- simmer-3.1.0/simmer/src/simulator.h | 145 ++---- simmer-3.1.0/simmer/src/stats.h |only simmer-3.1.0/simmer/tests/testthat/test-chaining.R | 1 simmer-3.1.0/simmer/tests/testthat/test-plot.R | 15 simmer-3.1.0/simmer/tests/testthat/test-simmer-generator.R |only simmer-3.1.0/simmer/tests/testthat/test-simmer-resource.R |only simmer-3.1.0/simmer/tests/testthat/test-simmer.R | 18 simmer-3.1.0/simmer/tests/testthat/test-simulation-1.R | 8 simmer-3.1.0/simmer/tests/testthat/test-simulation-2.R |only simmer-3.1.0/simmer/tests/testthat/test-trajectory-branch.R |only simmer-3.1.0/simmer/tests/testthat/test-trajectory-rollback.R |only simmer-3.1.0/simmer/tests/testthat/test-trajectory-seize-release.R |only simmer-3.1.0/simmer/tests/testthat/test-trajectory-setattribute.R |only simmer-3.1.0/simmer/tests/testthat/test-trajectory-timeout.R |only simmer-3.1.0/simmer/tests/testthat/test-trajectory.R | 97 +++- simmer-3.1.0/simmer/tests/testthat/test-util-funcs.R |only simmer-3.1.0/simmer/tests/testthat/test-wrap.R | 21 simmer-3.1.0/simmer/vignettes/introduction.Rmd | 1 simmer-3.1.0/simmer/vignettes/terminology.Rmd |only simmer-3.1.0/simmer/vignettes/trajectories.Rmd |only 92 files changed, 1547 insertions(+), 640 deletions(-)
Title: R Code for Mark Analysis
Description: An interface to the software package MARK that constructs input
files for MARK and extracts the output. MARK was developed by Gary White
and is freely available at (http://www.phidot.org/software/mark/downloads/)
but is not open source.
Author: Jeff Laake <jeff.laake@noaa.gov> with code contributions from Eldar
Rakhimberdiev, Ben Augustine and Daniel Turek, and example data and
analysis from Bret Collier, Jay Rotella, David Pavlacky,Andrew Paul and Luke Eberhart-Phillips.
Maintainer: Jeff Laake <Jeff.Laake@noaa.gov>
Diff between RMark versions 2.1.13 dated 2015-06-04 and 2.1.14 dated 2015-12-15
DESCRIPTION | 10 +- MD5 | 37 ++++---- NAMESPACE | 19 ++++ NEWS | 20 ++++ R/RMark-package.R | 182 +++++++++++++++++++++++++++++++++++++++++++ R/compute.design.data.R | 1 R/compute.real.R | 17 +++- R/covariate.predictions.r | 2 R/get.real.R | 49 ++++++++--- R/mark.R | 4 R/process.data.R | 4 R/var.components.reml.r | 3 inst/DerivedPar.txt | 11 ++ inst/MarkModels.pdf |binary inst/extdata/skagit.txt |only inst/models.txt | 8 + inst/parameters.txt | 49 +++++++++++ man/Burnham.Rd |only man/covariate.predictions.Rd | 2 man/get.real.Rd | 7 + man/skagit.Rd |only 21 files changed, 380 insertions(+), 45 deletions(-)
Title: Handling Missing Values with Multivariate Data Analysis
Description: Imputation of incomplete continuous or categorical datasets; Missing values are imputed with a principal component analysis (PCA), a multiple correspondence analysis (MCA) model or a multiple factor analysis (MFA) model; Perform multiple imputation with and in PCA.
Author: Francois Husson, Julie Josse
Maintainer: Francois Husson <husson@agrocampus-ouest.fr>
Diff between missMDA versions 1.8.2 dated 2015-07-01 and 1.9 dated 2015-12-15
missMDA-1.8.2/missMDA/R/MIPCA.R |only missMDA-1.9/missMDA/DESCRIPTION | 14 missMDA-1.9/missMDA/MD5 | 34 +- missMDA-1.9/missMDA/NAMESPACE | 11 missMDA-1.9/missMDA/R/MIMCA.r |only missMDA-1.9/missMDA/R/MIPCA.r |only missMDA-1.9/missMDA/R/Overimpute.r |only missMDA-1.9/missMDA/R/estim_ncpFAMD.R |only missMDA-1.9/missMDA/R/estim_ncpMCA.R | 165 +++++---- missMDA-1.9/missMDA/R/estim_ncpPCA.R | 6 missMDA-1.9/missMDA/R/imputeMFA.R | 519 ++++++++++++++++++------------- missMDA-1.9/missMDA/R/plot.MIPCA.R | 6 missMDA-1.9/missMDA/R/prelim.R |only missMDA-1.9/missMDA/data/TitanicNA.rda |only missMDA-1.9/missMDA/man/MIMCA.Rd |only missMDA-1.9/missMDA/man/MIPCA.Rd | 53 ++- missMDA-1.9/missMDA/man/Overimpute.Rd |only missMDA-1.9/missMDA/man/TitanicNA.Rd |only missMDA-1.9/missMDA/man/estim_ncpFAMD.Rd |only missMDA-1.9/missMDA/man/estim_ncpMCA.Rd | 80 ++-- missMDA-1.9/missMDA/man/imputeMCA.Rd | 2 missMDA-1.9/missMDA/man/imputePCA.Rd | 2 missMDA-1.9/missMDA/man/prelim.Rd |only missMDA-1.9/missMDA/man/vnf.Rd | 2 24 files changed, 531 insertions(+), 363 deletions(-)
Title: Statistical Analysis and Data Display: Heiberger and Holland
Description: Support software for Statistical Analysis and Data Display (Second Edition, Springer, ISBN 978-1-4939-2121-8, anticipated 2015) and (First Edition, Springer, ISBN 0-387-40270-5, 2004) by Richard M. Heiberger and Burt Holland. This contemporary presentation of statistical methods features extensive use of graphical displays for exploring data and for displaying the analysis. The second edition includes redesigned graphics and additional chapters. The authors emphasize how to construct and interpret graphs, discuss principles of graphical design, and show how accompanying traditional tabular results are used to confirm the visual impressions derived directly from the graphs. Many of the graphical formats are novel and appear here for the first time in print. All chapters have exercises. All functions introduced in the book are in the package. R code for all examples, both graphs and tables, in the book is included in the scripts directory of the package.
Author: Richard M. Heiberger
Maintainer: Richard M. Heiberger <rmh@temple.edu>
Diff between HH versions 3.1-23 dated 2015-11-09 and 3.1-24 dated 2015-12-15
HH-3.1-23/HH/R/formatHex.R |only HH-3.1-23/HH/R/showHex.R |only HH-3.1-23/HH/man/formatHex.Rd |only HH-3.1-23/HH/man/showHex.Rd |only HH-3.1-24/HH/DESCRIPTION | 12 ++--- HH-3.1-24/HH/MD5 | 27 +++++------- HH-3.1-24/HH/NAMESPACE | 13 ++--- HH-3.1-24/HH/NEWS | 17 +++++++ HH-3.1-24/HH/R/normal.and.t.R | 2 HH-3.1-24/HH/R/normal.and.t.shiny2.R |only HH-3.1-24/HH/inst/scripts/hh2/RApx.R | 24 +++++----- HH-3.1-24/HH/inst/scripts/hh2/dsgntwo.R | 7 --- HH-3.1-24/HH/inst/scripts/hh2/iinf.R | 28 ++++++------ HH-3.1-24/HH/inst/scripts/hh2/tway.R | 58 +++++++++++++------------- HH-3.1-24/HH/man/LikertPercentCountColumns.Rd | 1 HH-3.1-24/HH/man/print.TwoTrellisColumns.Rd | 1 HH-3.1-24/HH/man/pyramidLikert.Rd | 2 17 files changed, 98 insertions(+), 94 deletions(-)
Title: Fungible Coefficients and Monte Carlo Functions
Description: Functions for computing fungible coefficients and Monte Carlo data.
Author: Niels G. Waller <nwaller@umn.edu> and Jeff Jones <jeff.jones@kornferry.com>
Maintainer: Niels G. Waller <nwaller@umn.edu>
Diff between fungible versions 1.1 dated 2015-10-02 and 1.2 dated 2015-12-15
DESCRIPTION | 11 - MD5 | 12 - NAMESPACE | 5 R/fungibleL.R | 341 +++++++++++++++++++++++++++++++------------ inst/CITATION | 4 inst/doc/fungible-manual.pdf |binary man/fungibleL.Rd | 7 7 files changed, 276 insertions(+), 104 deletions(-)
Title: Functions For Statistics Classes At Carleton College
Description: Includes commands for bootstrapping and permutation tests, a command for created grouped bar plots, and a demo of the quantile-normal plot for data drawn from different distributions.
Author: Laura Chihara
Maintainer: Laura Chihara <lchihara@carleton.edu>
Diff between CarletonStats versions 1.1 dated 2014-07-03 and 1.2 dated 2015-12-15
CarletonStats-1.1/CarletonStats/man/Carleton-package.Rd |only CarletonStats-1.2/CarletonStats/DESCRIPTION | 8 CarletonStats-1.2/CarletonStats/MD5 | 15 CarletonStats-1.2/CarletonStats/NAMESPACE | 8 CarletonStats-1.2/CarletonStats/R/CarletonStats-internal.R | 255 ++++++------- CarletonStats-1.2/CarletonStats/R/corDemo.R | 27 - CarletonStats-1.2/CarletonStats/R/groupedBar.default.R | 78 ++- CarletonStats-1.2/CarletonStats/R/permTest.default.R | 35 - CarletonStats-1.2/CarletonStats/R/permTest.formula.R | 14 9 files changed, 222 insertions(+), 218 deletions(-)
Title: Create Waffle Chart Visualizations in R
Description: Square pie charts (a.k.a. waffle charts) can be used
to communicate parts of a whole for categorical quantities. To emulate the
percentage view of a pie chart, a 10x10 grid should be used with each square
representing 1% of the total. Modern uses of waffle charts do not
necessarily adhere to this rule and can be created with a grid of any
rectangular shape. Best practices suggest keeping the number of categories
small, just as should be done when creating pie charts. Tools are provided
to create waffle charts as well as stitch them together, and to use glyphs
for isotype pictogram creation.
Author: Bob Rudis <bob@rudis.net>
Maintainer: Bob Rudis <bob@rudis.net>
Diff between waffle versions 0.3.1 dated 2015-03-23 and 0.5.0 dated 2015-12-15
DESCRIPTION | 19 ++++++----- MD5 | 22 +++++++++---- NAMESPACE | 39 +++++++++++++++++++++--- R/fontawesome.R |only R/iron.R | 9 ++--- R/waffle-package.R | 21 +++++++++++-- R/waffle.R | 80 +++++++++++++++++++++++++++++++++++++++++--------- inst |only man/fa_grep.Rd |only man/fa_list.Rd |only man/iron.Rd | 2 - man/waffle-package.Rd |only man/waffle.Rd | 32 +++++++++++++++----- 13 files changed, 174 insertions(+), 50 deletions(-)
Title: Propensity Score Matching of Non-Binary Treatments
Description: Propensity score matching for non-binary treatments.
Author: Jason Bryer <jason@bryer.org>
Maintainer: Jason Bryer <jason@bryer.org>
Diff between TriMatch versions 0.9.4 dated 2015-04-07 and 0.9.6 dated 2015-12-15
DESCRIPTION | 9 ++-- MD5 | 76 ++++++++++++++++++++-------------------- NAMESPACE | 20 ++++++++-- R/TriMatch-package.R | 6 ++- demo/tutoring.R | 1 man/OneToN.Rd | 2 - man/TriMatch-package.Rd | 2 - man/as.data.frame.list.Rd | 14 +++---- man/balance.plot.Rd | 4 +- man/boxdiff.plot.Rd | 2 - man/covariateBalance.Rd | 24 ++++++------ man/distance.euclid.Rd | 4 +- man/distances.plot.Rd | 2 - man/loess3.plot.Rd | 8 ++-- man/maximumTreat.Rd | 2 - man/merge.triangle.matches.Rd | 2 - man/merge.triangle.psa.Rd | 2 - man/multibalance.plot.Rd | 4 +- man/nmes.Rd | 26 ++++++------- man/parallel.plot.Rd | 2 - man/perpPt.Rd | 2 - man/plot.balance.plots.Rd | 2 - man/plot.triangle.matches.Rd | 4 +- man/plot.triangle.psa.Rd | 2 - man/print.balance.plots.Rd | 2 - man/print.triangle.plot.Rd | 6 +-- man/print.trimatch.summary.Rd | 4 +- man/segment1.Rd | 2 - man/segment2.Rd | 2 - man/star.Rd | 2 - man/summary.balance.plots.Rd | 2 - man/summary.triangle.matches.Rd | 4 +- man/summary.triangle.psa.Rd | 2 - man/summary.unmatched.Rd | 2 - man/trimatch.Rd | 14 +++---- man/trimatch.apply2.Rd | 10 ++--- man/trips.Rd | 2 - man/tutoring.Rd | 2 - man/unmatched.Rd | 2 - 39 files changed, 149 insertions(+), 131 deletions(-)
Title: Centre of Mass Assessment and Consolidation of Trees
Description: The centre of mass is a crucial data for arborists in order to
consolidate a tree using steel or dynamic cables. Given field-recorded data
on branchiness of a tree, the package: (i) computes and plots the centre of
mass of the tree itself, (ii) computes branches slenderness coefficient in
order to aid the arborist identify potentially dangerous branches, and
(iii) computes the force acting on a ground plinth and its best position
relating to the tree centre of mass, should the tree need to be stabilized
by a steel cable.
Author: Marco Bascietto <marco.bascietto@entecra.it>
Maintainer: Marco Bascietto <marco.bascietto@entecra.it>
Diff between treecm versions 1.2.1 dated 2014-05-22 and 1.2.2 dated 2015-12-15
DESCRIPTION | 17 +++--- MD5 | 104 ++++++++++++++++++++--------------------- NAMESPACE | 12 ++++ R/CM.R | 4 + R/SC.R | 5 + R/moment.R | 2 R/stabilization.R | 4 - R/treecm.R | 6 +- R/vectors.R | 4 + build/vignette.rds |binary inst/doc/treecm.R | 2 inst/doc/treecm.Rnw | 44 ++++++++++------- inst/doc/treecm.pdf |binary man/Dst.Rd | 4 + man/allometryABDC.Rd | 21 ++++---- man/allometryAsca2011.Rd | 17 +++--- man/allometryCutini2009.Rd | 19 +++---- man/allometryPorte2002.Rd | 17 +++--- man/anchorRange.Rd | 11 ++-- man/branchSR.Rd | 7 +- man/buildMomentObject.Rd | 7 +- man/buildTreeMomentObject.Rd | 7 +- man/calcMoment.Rd | 7 +- man/centreOfMass.Rd | 3 - man/centreOfMassAngle.Rd | 14 ++--- man/centreOfMassModulus.Rd | 11 ++-- man/getCoordinatesAndMoment.Rd | 19 +++---- man/getMoment.Rd | 7 +- man/getPlinthForce.Rd | 11 ++-- man/importFieldData.Rd | 5 + man/logBiomass.Rd | 21 ++++---- man/logPathSelection.Rd | 11 ++-- man/plot.CM.Rd | 3 - man/plot.SR.Rd | 7 +- man/plot.vector.Rd | 3 - man/plotPolarSegment.Rd | 3 - man/powerEquation.Rd | 17 +++--- man/print.CM.Rd | 3 - man/pureQuadraticEquation.Rd | 15 +++-- man/setBranchesCM.Rd | 3 - man/stonePine1FieldData.Rd | 7 +- man/stonePine1TreeData.Rd | 7 +- man/stonePine2FieldData.Rd | 7 +- man/summary.CM.Rd | 3 - man/toCartesianXY.Rd | 9 +-- man/toCartesianXYZ.Rd | 11 ++-- man/toPolar.Rd | 3 - man/treeBiomass.Rd | 15 +++-- man/treeSR.Rd | 9 +-- man/treeTotalBiomass.Rd | 15 +++-- man/treeVectors.Rd | 3 - man/treecm-package.Rd | 9 +-- vignettes/treecm.Rnw | 44 ++++++++++------- 53 files changed, 352 insertions(+), 267 deletions(-)
Title: Multilevel Joint Modelling Multiple Imputation
Description: Similarly to Schafer's package pan, jomo is a package for multilevel joint modelling multiple imputation.
Novel aspects of jomo are the possibility of handling binary and categorical data through latent normal variables and the option to use cluster-specific covariance matrices.
Author: Matteo Quartagno, James Carpenter
Maintainer: Matteo Quartagno <matteo.quartagno@lshtm.ac.uk>
Diff between jomo versions 1.2-3 dated 2015-11-23 and 1.3-0 dated 2015-12-15
DESCRIPTION | 8 +- MD5 | 100 ++++++++++++------------- R/jomo.MCMCchain.R | 6 - R/jomo.R | 6 - R/jomo1.MCMCchain.R | 42 +++++----- R/jomo1.R | 42 +++++----- R/jomo1cat.MCMCchain.R | 55 +++++++------ R/jomo1cat.R | 71 +++++++++-------- R/jomo1con.MCMCchain.R | 22 ++--- R/jomo1con.R | 36 ++++----- R/jomo1mix.MCMCchain.R | 71 +++++++++-------- R/jomo1mix.R | 89 +++++++++++----------- R/jomo1ran.MCMCchain.R | 162 ++++++++++++++++++++--------------------- R/jomo1ran.R | 162 ++++++++++++++++++++--------------------- R/jomo1rancat.MCMCchain.R | 76 ++++++++++--------- R/jomo1rancat.R | 104 +++++++++++++------------- R/jomo1rancathr.MCMCchain.R | 78 ++++++++++--------- R/jomo1rancathr.R | 108 ++++++++++++++------------- R/jomo1rancon.MCMCchain.R | 45 ++++++----- R/jomo1rancon.R | 71 +++++++++-------- R/jomo1ranconhr.MCMCchain.R | 47 ++++++----- R/jomo1ranconhr.R | 75 +++++++++--------- R/jomo1ranmix.MCMCchain.R | 95 ++++++++++++------------ R/jomo1ranmix.R | 125 ++++++++++++++++--------------- R/jomo1ranmixhr.MCMCchain.R | 97 +++++++++++++----------- R/jomo1ranmixhr.R | 129 +++++++++++++++++--------------- man/jomo-package.Rd | 4 - man/jomo.MCMCchain.Rd | 21 ++--- man/jomo.Rd | 18 ++-- man/jomo1.MCMCchain.Rd | 8 +- man/jomo1.Rd | 8 +- man/jomo1cat.MCMCchain.Rd | 29 +++---- man/jomo1cat.Rd | 32 ++++---- man/jomo1con.MCMCchain.Rd | 18 ++-- man/jomo1con.Rd | 22 +++-- man/jomo1mix.MCMCchain.Rd | 33 ++++---- man/jomo1mix.Rd | 36 ++++----- man/jomo1ran.MCMCchain.Rd | 18 ++-- man/jomo1ran.Rd | 18 ++-- man/jomo1rancat.MCMCchain.Rd | 49 ++++++------ man/jomo1rancat.Rd | 54 +++++++------ man/jomo1rancathr.MCMCchain.Rd | 54 +++++++------ man/jomo1rancathr.Rd | 58 +++++++------- man/jomo1rancon.MCMCchain.Rd | 35 ++++---- man/jomo1rancon.Rd | 37 +++++---- man/jomo1ranconhr.MCMCchain.Rd | 42 +++++----- man/jomo1ranconhr.Rd | 48 ++++++------ man/jomo1ranmix.MCMCchain.Rd | 53 +++++++------ man/jomo1ranmix.Rd | 54 +++++++------ man/jomo1ranmixhr.MCMCchain.Rd | 58 +++++++------- man/jomo1ranmixhr.Rd | 59 ++++++++------ 51 files changed, 1452 insertions(+), 1336 deletions(-)
Title: Joint Mean-Covariance Models using 'Armadillo' and S4
Description: Fit joint mean-covariance models for longitudinal data. The models
and their components are represented using S4 classes and methods. The core
computational algorithms are implemented using the 'Armadillo' C++ library
for numerical linear algebra and 'RcppArmadillo' glue.
Author: Jianxin Pan [aut, cre],
Yi Pan [aut]
Maintainer: Jianxin Pan <Jianxin.Pan@manchester.ac.uk>
Diff between jmcm versions 0.1.0.0 dated 2015-12-15 and 0.1.1.0 dated 2015-12-15
DESCRIPTION | 10 +- MD5 | 48 +++++++------- NAMESPACE | 44 ++++++------ R/RcppExports.R | 108 +++++++++++++++---------------- man/ACD-class.Rd | 22 +++--- man/HPC-class.Rd | 22 +++--- man/MCD-class.Rd | 22 +++--- man/acd_estimation.Rd | 72 ++++++++++----------- man/aids.Rd | 50 +++++++------- man/bootcurve.Rd | 58 ++++++++-------- man/cash-ACD-method.Rd | 36 +++++----- man/cash-HPC-method.Rd | 36 +++++----- man/cash-MCD-method.Rd | 36 +++++----- man/cattle.Rd | 58 ++++++++-------- man/getJMCM.Rd | 154 ++++++++++++++++++++++----------------------- man/hpc_estimation.Rd | 72 ++++++++++----------- man/jmcm.Rd | 86 ++++++++++++------------- man/jmcmControl.Rd | 44 ++++++------ man/jmcmMod-class.Rd | 54 +++++++-------- man/mcd_estimation.Rd | 72 ++++++++++----------- man/meanplot.Rd | 46 ++++++------- man/modular.Rd | 124 ++++++++++++++++++------------------ man/regressogram.Rd | 54 +++++++-------- man/show-jmcmMod-method.Rd | 34 ++++----- src/mcd.cpp | 84 ++++++++++++------------ 25 files changed, 723 insertions(+), 723 deletions(-)
Title: Utilities for the Simulation and Analysis of Random Fields
Description: Various utilities are provided that might be used in spatial statistics and elsewhere. It delivers a method for solving linear equations that checks the sparsity of the matrix before any algorithm is used. Furthermore, it includes the Struve functions.
Author: Martin Schlather [aut, cre], Reinhard Furrer [ctb], Martin Kroll [ctb]
Maintainer: Martin Schlather <schlather@math.uni-mannheim.de>
Diff between RandomFieldsUtils versions 0.0.12 dated 2015-11-05 and 0.0.14 dated 2015-12-15
DESCRIPTION | 6 - MD5 | 25 +++--- inst/include/Basic_utils.h | 2 inst/include/Error_utils.h | 40 ++++++---- inst/include/Solve.h | 64 +++++++++++++---- inst/include/utils.h | 6 - src/Basic_utils.h | 2 src/Error_utils.h | 40 ++++++---- src/R_init.cc | 3 src/R_init.h | 3 src/Solve.h | 64 +++++++++++++---- src/solve.cc | 169 +++++++++++++++++++++++++-------------------- src/sqrt.cc |only src/utils.h | 6 - 14 files changed, 272 insertions(+), 158 deletions(-)
More information about RandomFieldsUtils at CRAN
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Title: Simulation and Analysis of Random Fields
Description: Methods for the inference on and the simulation of Gaussian fields are provided, as well as methods for the simulation of extreme value random fields.
Author: Martin Schlather [aut, cre], Alexander Malinowski [aut], Marco Oesting [aut], Daphne Boecker [aut], Kirstin Strokorb [aut], Sebastian Engelke [aut], Johannes Martini [aut], Felix Ballani [aut], Olga Moreva [aut], Christoph Berreth [ctr], Peter Menck [ctr], Sebastian Gross [ctr], Ulrike Ober [ctb], Katharina Burmeister [ctb], Juliane Manitz [ctb], Paulo Ribeiro [ctb], Richard Singleton [ctb], Ben Pfaff [ctb], R Core Team [ctb]
Maintainer: Martin Schlather <schlather@math.uni-mannheim.de>
Diff between RandomFields versions 3.1.3 dated 2015-11-05 and 3.1.4 dated 2015-12-15
DESCRIPTION | 6 MD5 | 90 +++++++------- NAMESPACE | 2 R/Methods-aux.R | 2 R/RC_GLOBALS.R | 17 ++ R/RCauto.R | 25 ---- R/RFfit.R | 4 R/RFgui.R | 1 R/RMmodels.R | 18 +- R/fitgauss.R | 17 +- R/getNset.R | 90 +++++++++++++- R/helmholz.R |only man/Bayesian.Rd | 2 man/GaussianFields.Rd | 81 ++++++++++++- man/RFgetModel.Rd |only man/RFgetModelInfo.Rd | 225 +++++++++++++++++++----------------- man/RFoptions.Rd | 112 +++++++++--------- man/RMplus.Rd | 2 man/RPcirculant.Rd | 2 man/RPcoin.Rd | 3 man/RPhyperplane.Rd | 7 - man/RPnugget.Rd | 2 man/RPsequential.Rd | 42 ++---- man/RPspecific.Rd | 8 - man/RPspectral.Rd | 6 man/RPtbm.Rd | 3 src/AutoRandomFields.cc | 12 + src/AutoRandomFields.h | 20 --- src/KeyInfo.cc | 16 +- src/MLE.cc | 19 +-- src/Operator.h | 1 src/RF.h | 46 +++++-- src/Userinterfaces.h | 24 +-- src/circulant.cc | 32 ++--- src/direct.cc | 298 ++++-------------------------------------------- src/extremes.cc | 2 src/gauss.cc | 54 +++++--- src/gausslikeli.cc | 9 - src/getNset.cc | 8 - src/initNerror.cc | 28 +++- src/operator.cc | 5 src/plusmalS.cc | 2 src/rf_interfaces.cc | 12 + src/sequential.cc | 11 + src/userinterfaces.cc | 165 +++++++++++++------------- src/xport.cc | 7 + src/xport.h | 6 47 files changed, 763 insertions(+), 781 deletions(-)
Title: Tools for Simulating and Plotting Quantities of Interest
Estimated from Cox Proportional Hazards Models
Description: Simulates and plots quantities of interest (relative
hazards, first differences, and hazard ratios) for linear coefficients,
multiplicative interactions, polynomials, penalised splines, and
non-proportional hazards, as well as stratified survival curves from Cox
Proportional Hazard models. It also simulates and plots marginal effects
for multiplicative interactions.
Author: Christopher Gandrud [aut, cre]
Maintainer: Christopher Gandrud <christopher.gandrud@gmail.com>
Diff between simPH versions 1.3.4 dated 2015-09-21 and 1.3.5 dated 2015-12-15
DESCRIPTION | 9 ++-- MD5 | 60 ++++++++++++++--------------- NAMESPACE | 2 NEWS | 22 +++++++--- R/ggfitStrata.R | 90 +++++++++++++++++++++++--------------------- R/simGG.siminteract.R | 12 ++--- R/simGG.simlinear.R | 12 ++--- R/simGG.simpoly.R | 12 ++--- R/simGG.simspline.R | 10 ++-- R/simGG.simtvc.R | 10 ++-- README.md | 2 man/CarpenterFdaData.Rd | 8 +-- man/GolubEUPData.Rd | 8 +-- man/MinMaxLines.Rd | 3 - man/SurvExpand.Rd | 3 - man/as.data.frame.coxsim.Rd | 2 man/coxsimInteract.Rd | 3 - man/coxsimLinear.Rd | 3 - man/coxsimPoly.Rd | 3 - man/coxsimSpline.Rd | 3 - man/coxsimtvc.Rd | 3 - man/ggfitStrata.Rd | 29 ++++++++------ man/setXl.Rd | 2 man/simGG.Rd | 3 - man/simGG.siminteract.Rd | 15 +++---- man/simGG.simlinear.Rd | 16 ++++--- man/simGG.simpoly.Rd | 15 +++---- man/simGG.simspline.Rd | 13 +++--- man/simGG.simtvc.Rd | 13 +++--- man/simPH.Rd | 2 man/tvc.Rd | 3 - 31 files changed, 215 insertions(+), 176 deletions(-)
Title: Manipulations of Triangular Meshes Based on the 'VCGLIB' API
Description: Operations on triangular meshes based on 'VCGLIB'. This package
integrates nicely with the R-package 'rgl' to render the meshes processed by
'Rvcg'. The Visualization and Computer Graphics Library (VCG for short) is
an open source portable C++ templated library for manipulation, processing
and displaying with OpenGL of triangle and tetrahedral meshes. The library,
composed by more than 100k lines of code, is released under the GPL license,
and it is the base of most of the software tools of the Visual Computing Lab of
the Italian National Research Council Institute ISTI (http://vcg.isti.cnr.it),
like 'metro' and 'MeshLab'. The 'VCGLIB' source is pulled from trunk (svn://
svn.code.sf.net/p/vcg/code/trunk/vcglib) and patched to work with options
determined by the configure script as well as to work with the header files
included by 'RcppEigen'.
Author: Stefan Schlager; the authors of VCGLIB for the included version of the
code
Maintainer: Stefan Schlager <zarquon42@gmail.com>
Diff between Rvcg versions 0.12.2 dated 2015-06-26 and 0.13.0 dated 2015-12-15
DESCRIPTION | 31 MD5 | 125 NAMESPACE | 15 R/Rvcg-package.R | 5 R/normorient.r |only R/vcgClost.r | 5 R/vcgClostKD.r | 10 R/vcgIsosurface.r | 81 R/vcgKDtree.r | 7 R/vcgPlatonic.r |only R/vcgPlyWrite.r | 16 R/vcgSample.r | 2 R/vcgUpdateNormals.r | 4 inst/NEWS.Rd | 25 man/Rvcg-package.Rd | 6 man/dummyhead.Rd | 2 man/humface.Rd | 2 man/meshintegrity.Rd | 2 man/setRays.Rd | 2 man/vcgBary.Rd | 2 man/vcgBorder.Rd | 3 man/vcgClean.Rd | 2 man/vcgClost.Rd | 8 man/vcgClostKD.Rd | 14 man/vcgCurve.Rd | 3 man/vcgGetEdge.Rd | 2 man/vcgImport.Rd | 2 man/vcgIsolated.Rd | 5 man/vcgIsosurface.Rd | 8 man/vcgKDtree.Rd | 10 man/vcgMeshres.Rd | 2 man/vcgNonBorderEdge.Rd | 3 man/vcgPlatonic.Rd |only man/vcgPlyRead.Rd | 2 man/vcgPlyWrite.Rd | 9 man/vcgQEdecim.Rd | 8 man/vcgRaySearch.Rd | 3 man/vcgSample.Rd | 3 man/vcgSmooth.Rd | 4 man/vcgStlWrite.Rd | 2 man/vcgUniformRemesh.Rd | 2 man/vcgUpdateNormals.Rd | 2 man/vcgVFadj.Rd | 2 src/Makevars.in | 8 src/Makevars.win | 7 src/Rclost.cpp | 12 src/Rexport.cpp | 45 src/Rintersect.cpp | 46 src/Rkdtree.cpp | 40 src/Rplatonic.cpp |only src/Rsample.cpp | 4 src/Rsmooth.cpp | 2 src/RvcgIO.h | 113 src/RvcgKD.h | 74 src/checkListNames.cpp |only src/checkListNames.h |only src/vcglib/vcg/complex/algorithms/parametrization/tangent_field_operators.h | 562 +++ src/vcglib/vcg/complex/algorithms/parametrization/uv_utils.h | 8 src/vcglib/vcg/complex/algorithms/update/quality.h | 2 src/vcglib/vcg/math/base.h | 1 src/vcglib/vcg/simplex/face/pos.h | 32 src/vcglib/vcg/simplex/face/topology.h | 4 src/vcglib/vcg/space/index/kdtree/kdtree.h | 42 src/vcglib/wrap/gl/gl_mesh_attributes_feeder.h |only src/vcglib/wrap/gl/trimesh.h | 1709 +++++----- src/vcglib/wrap/igl/miq_parametrization.h | 10 src/vcglib/wrap/io_trimesh/import_stl.h | 5 67 files changed, 2023 insertions(+), 1144 deletions(-)
Title: Calculations and Visualisations Related to Geometric
Morphometrics
Description: A toolset for Geometric Morphometrics and mesh processing. This
includes (among other stuff) mesh deformations based on reference points,
permutation tests, detection of outliers, processing of sliding
semi-landmarks and semi-automated surface landmark placement.
Author: Stefan Schlager [aut, cre, cph],
Gregory Jefferis [ctb]
Maintainer: Stefan Schlager <stefan.schlager@uniklinik-freiburg.de>
Diff between Morpho versions 2.3.0 dated 2015-06-23 and 2.3.1 dated 2015-12-15
DESCRIPTION | 17 +- MD5 | 285 +++++++++++++++++++++-------------------- NAMESPACE | 14 +- R/CVA.r | 15 +- R/ComputeTransform.r | 13 + R/Morpho-package.R | 6 R/ProcGPA.r | 105 +++++++-------- R/angleTest.r |only R/applyTransform.r | 26 +++ R/asymPermu.r | 6 R/classify.r | 9 + R/cutSpace.r | 1 R/deformGrid2d.r | 2 R/meshDist.r | 33 +++- R/meshDistMatrix.r | 19 +- R/meshPlaneIntersect.r | 14 +- R/permudist.r | 2 R/place.patch.r | 14 +- R/pls2B.r | 16 +- R/points2plane.r | 37 +++++ R/qqmat.r | 2 R/relwarps.r | 146 ++++++++++----------- R/rotonto.r | 31 +++- R/typprob.r | 6 inst/NEWS.Rd | 29 ++++ inst/extdata/landmarks.pts | 4 man/CAC.Rd | 2 man/CVA.Rd | 32 +++- man/CreateL.Rd | 5 man/Morpho-deprecated.Rd | 2 man/Morpho-package.Rd | 6 man/NNshapeReg.Rd | 5 man/PCdist.Rd | 5 man/ProcGPA.Rd | 4 man/RegScore.Rd | 3 man/angle.calc.Rd | 4 man/angleTest.Rd |only man/anonymize.Rd | 5 man/applyTransform.Rd | 5 man/areaSphere.Rd |only man/areaSpherePart.Rd |only man/armaGinv.Rd | 2 man/arrMean3.Rd | 2 man/asymPermute.Rd | 8 - man/barycenter.Rd | 3 man/bindArr.Rd | 6 man/boneData.Rd | 2 man/cExtract.Rd | 2 man/cSize.Rd | 4 man/checkLM.Rd | 4 man/classify.Rd | 2 man/closemeshKD.Rd | 4 man/colors.Rd | 2 man/computeTransform.Rd | 5 man/covDist.Rd | 9 + man/covW.Rd | 2 man/createAtlas.Rd | 4 man/createMissingList.Rd | 2 man/cutMeshPlane.Rd | 2 man/cutSpace.Rd | 2 man/deformGrid2d.Rd | 5 man/deformGrid3d.Rd | 2 man/exVar.Rd | 3 man/find.outliers.Rd | 6 man/fixLMmirror.Rd | 2 man/fixLMtps.Rd | 3 man/getFaces.Rd | 2 man/getMeaningfulPCs.Rd | 2 man/getPCtol.Rd | 4 man/getPLSfromScores.Rd | 2 man/getPLSscores.Rd | 2 man/getTrafo4x4.Rd | 2 man/getTrafoRotaxis.Rd | 2 man/groupPCA.Rd | 5 man/histGroup.Rd | 7 - man/icpmat.Rd | 2 man/invertFaces.Rd | 3 man/kendalldist.Rd | 4 man/line2plane.Rd | 2 man/lineplot.Rd | 4 man/list2array.Rd | 2 man/mcNNindex.Rd | 4 man/mergeMeshes.Rd | 4 man/mesh2grey.Rd | 2 man/mesh2ply.Rd | 3 man/meshDist.Rd | 10 + man/meshPlaneIntersect.Rd | 6 man/meshcube.Rd | 4 man/meshres.Rd | 5 man/mirror.Rd | 2 man/mirror2plane.Rd |only man/name2factor.Rd | 6 man/nose.Rd | 2 man/pcAlign.Rd | 2 man/pcaplot3d.Rd | 3 man/permudist.Rd | 7 - man/permuvec.Rd | 4 man/placePatch.Rd | 3 man/plotAtlas.Rd | 3 man/plotNormals.Rd | 4 man/pls2B.Rd | 5 man/plsCoVar.Rd | 7 - man/ply2mesh.Rd | 3 man/points2plane.Rd | 2 man/predictPLSfromData.Rd | 2 man/predictPLSfromScores.Rd | 2 man/predictShape.lm.Rd | 5 man/proc.weight.Rd | 4 man/procAOVsym.Rd | 4 man/procSym.Rd | 5 man/projRead.Rd | 7 - man/qqmat.Rd | 6 man/quad2trimesh.Rd | 5 man/r2morphoj.Rd | 4 man/ray2mesh.Rd | 2 man/read.csv.folder.Rd | 2 man/read.lmdta.Rd | 2 man/read.mpp.Rd | 2 man/read.pts.Rd | 4 man/readLandmarks.csv.Rd | 2 man/readallTPS.Rd | 2 man/regdist.Rd | 4 man/relWarps.Rd | 22 ++- man/relaxLM.Rd | 7 - man/render.Rd | 8 - man/retroDeform3d.Rd | 2 man/retroDeformMesh.Rd | 2 man/rotaxis3d.Rd | 3 man/rotaxisMat.Rd | 2 man/rotmesh.onto.Rd | 4 man/rotonmat.Rd | 4 man/rotonto.Rd | 10 + man/scalemesh.Rd | 4 man/showPC.Rd | 4 man/slider3d.Rd | 3 man/solutionSpace.Rd | 2 man/symmetrize.Rd | 2 man/tangentPlane.Rd | 3 man/tps3d.Rd | 3 man/typprob.Rd | 5 man/updateNormals.Rd | 3 man/vecx.Rd | 5 man/vertex.Rd | 4 man/warpmovie3d.Rd | 5 man/write.pts.Rd | 4 tests/testthat/test-relWarps.r |only tests/testthat/testdata/rW.rds |only 147 files changed, 849 insertions(+), 480 deletions(-)
Title: Functions that Apply to Rows and Columns of Matrices (and to
Vectors)
Description: High-performing functions operating on rows and columns of matrices, e.g. col / rowMedians(), col / rowRanks(), and col / rowSds(). Functions optimized per data type and for subsetted calculations such that both memory usage and processing time is minimized. There are also optimized vector-based methods, e.g. binMeans(), madDiff() and weightedMedians().
Author: Henrik Bengtsson [aut, cre, cph], Hector Corrada Bravo [ctb], Robert Gentleman [ctb], Ola Hossjer [ctb], Harris Jaffee [ctb], Dongcan Jiang [ctb], Peter Langfelder [ctb]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Diff between matrixStats versions 0.50.0 dated 2015-12-13 and 0.50.1 dated 2015-12-15
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ NEWS | 7 +++++++ build/vignette.rds |binary inst/doc/matrixStats-methods.html | 4 ++-- man/matrixStats-package.Rd | 2 +- src/validateIndices.c | 8 ++++++-- 7 files changed, 26 insertions(+), 15 deletions(-)
Title: Functions to Analyze and Visualize Likert Type Items
Description: Functions to analyze and visualize likert type items.
Author: Jason Bryer <jason@bryer.org>, Kimberly Speerschneider
<kimkspeer@gmail.com>
Maintainer: Jason Bryer <jason@bryer.org>
Diff between likert versions 1.3.1 dated 2015-11-03 and 1.3.3 dated 2015-12-15
DESCRIPTION | 12 ++++++------ MD5 | 38 +++++++++++++++++++------------------- NAMESPACE | 18 +++++++++++++++--- NEWS | 11 +++++++++++ R/align.R | 30 ++++++++++++++---------------- R/likert-package.R | 12 ++++++++++-- R/plot.histogram.R | 4 ++-- R/plot.likert.bar.r | 2 +- R/plot.likert.r | 11 +++++++++++ R/shinyLikert.R | 1 - build/vignette.rds |binary demo/RecodeFactors.R | 4 ++-- demo/UnusedLevels.R | 12 ++++++++++++ demo/likert.R | 4 ++-- inst/doc/likert-xtable.R | 24 ++++++++++++------------ inst/doc/likert-xtable.Rnw | 24 ++++++++++++------------ inst/doc/likert-xtable.pdf |binary inst/shiny/server.R | 24 ++++++++++++------------ man/plot.likert.Rd | 5 ++++- vignettes/likert-xtable.Rnw | 24 ++++++++++++------------ 20 files changed, 157 insertions(+), 103 deletions(-)
Title: Plots (Slightly Extended) Bland-Altman Plots
Description: Bland-Altman Plots using either base graphics or ggplot2,
augmented with confidence intervals, with detailed return values and
a sunflowerplot option for data with ties.
Author: Bernhard Lehnert
Maintainer: Bernhard Lehnert <bernhard.lehnert@uni-greifswald.de>
Diff between BlandAltmanLeh versions 0.1.0 dated 2014-08-13 and 0.2.1 dated 2015-12-15
BlandAltmanLeh-0.1.0/BlandAltmanLeh/R/BlandAltmanLeh.R |only BlandAltmanLeh-0.2.1/BlandAltmanLeh/DESCRIPTION | 15 +- BlandAltmanLeh-0.2.1/BlandAltmanLeh/MD5 | 25 +-- BlandAltmanLeh-0.2.1/BlandAltmanLeh/NAMESPACE | 8 - BlandAltmanLeh-0.2.1/BlandAltmanLeh/R/bland.altman.R | 19 +- BlandAltmanLeh-0.2.1/BlandAltmanLeh/build/vignette.rds |binary BlandAltmanLeh-0.2.1/BlandAltmanLeh/inst/doc/Intro.R | 21 +- BlandAltmanLeh-0.2.1/BlandAltmanLeh/inst/doc/Intro.Rmd | 72 ++++++---- BlandAltmanLeh-0.2.1/BlandAltmanLeh/inst/doc/Intro.html | 71 +++++---- BlandAltmanLeh-0.2.1/BlandAltmanLeh/man/BlandAltmanLeh-package.Rd | 8 - BlandAltmanLeh-0.2.1/BlandAltmanLeh/man/bland.altman.PEFR.Rd | 16 -- BlandAltmanLeh-0.2.1/BlandAltmanLeh/man/bland.altman.plot.Rd | 39 +++-- BlandAltmanLeh-0.2.1/BlandAltmanLeh/man/bland.altman.stats.Rd | 29 ++-- BlandAltmanLeh-0.2.1/BlandAltmanLeh/vignettes/Intro.Rmd | 72 ++++++---- 14 files changed, 230 insertions(+), 165 deletions(-)
More information about BlandAltmanLeh at CRAN
Permanent link
Title: Bayesian Estimation of the GARCH(1,1) Model with Student-t
Innovations
Description: Provides the bayesGARCH function which performs the
Bayesian estimation of the GARCH(1,1) model with Student's t innovations.
Author: David Ardia [aut, cre]
Maintainer: David Ardia <david.ardia@fsa.ulaval.ca>
Diff between bayesGARCH versions 2.0.1 dated 2014-01-07 and 2.0.2 dated 2015-12-15
bayesGARCH-2.0.1/bayesGARCH/build |only bayesGARCH-2.0.1/bayesGARCH/demo |only bayesGARCH-2.0.1/bayesGARCH/inst/doc |only bayesGARCH-2.0.1/bayesGARCH/vignettes |only bayesGARCH-2.0.2/bayesGARCH/DESCRIPTION | 18 +++++++------ bayesGARCH-2.0.2/bayesGARCH/MD5 | 27 +++++++------------- bayesGARCH-2.0.2/bayesGARCH/NAMESPACE | 5 +++ bayesGARCH-2.0.2/bayesGARCH/NEWS | 9 ++++++ bayesGARCH-2.0.2/bayesGARCH/R/sampler.R | 8 +++--- bayesGARCH-2.0.2/bayesGARCH/THANKS | 2 - bayesGARCH-2.0.2/bayesGARCH/inst/CITATION | 22 +--------------- bayesGARCH-2.0.2/bayesGARCH/inst/COPYRIGHTS | 2 - bayesGARCH-2.0.2/bayesGARCH/man/bayesGARCH.Rd | 34 ++++++++++++++------------ bayesGARCH-2.0.2/bayesGARCH/man/dem2gbp.Rd | 2 - bayesGARCH-2.0.2/bayesGARCH/man/formSmpl.Rd | 9 +++--- 15 files changed, 65 insertions(+), 73 deletions(-)