Thu, 24 Dec 2015

New package telegram with initial version 0.1
Package: telegram
Title: R Wrapper Around the Telegram Bot API
Version: 0.1
Authors@R: person("Luca", "Braglia", email = "lbraglia@gmail.com", role = c("aut", "cre"))
Description: R wrapper around the Telegram Bot API (http://core.telegram.org/bots/api) to access Telegram's messaging facilities with ease (eg you send messages, images, files from R to your smartphone).
URL: http://github.com/lbraglia/telegram
BugReports: http://github.com/lbraglia/telegram/issues
Imports: R6, httr
Depends: R (>= 3.2.3)
License: GPL-3
LazyData: true
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2015-12-24 13:15:41 UTC; l
Author: Luca Braglia [aut, cre]
Maintainer: Luca Braglia <lbraglia@gmail.com>
Repository: CRAN
Date/Publication: 2015-12-24 14:45:31

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New package shock with initial version 1.0
Package: shock
Type: Package
Title: Slope Heuristic for Block-Diagonal Covariance Selection in High Dimensional Gaussian Graphical Models
Version: 1.0
Date: 2015-12-24
Author: Emilie Devijver, Melina Gallopin
Maintainer: Melina Gallopin <melina.gallopin@gmail.com>
Description: Block-diagonal covariance selection for high dimensional Gaussian graphical models. The selection procedure is based on the slope heuristics.
License: GPL (>= 3)
Imports: glasso, mvtnorm, capushe, GGMselect, igraph, stats
Packaged: 2015-12-24 12:24:32 UTC; gallopin
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-12-24 14:45:29

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New package r.jive with initial version 1.2
Package: r.jive
Type: Package
Title: Perform JIVE Decompositions for Multi-Source Data
Version: 1.2
Date: 2015-12-15
Author: Michael J. O'Connell and Eric F. Lock
Maintainer: Michael J. O'Connell <oconn725@umn.edu>
Description: Performs the JIVE decompositions on a list of data sets when the data share a dimension, returning low-rank matrices that capture the joint and individual structure of the data. It provides two methods of rank selection when the rank is unknown, a permutation test and a BIC selection algorithm. Also included in the package are three plotting functions for visualizing the variance attributed to each data source: a bar plot that shows the percentages of the variability attributable to joint and individual structure, a heatmap that shows the structure of the variability, and principal component plots.
License: GPL-3
Imports: SpatioTemporal, gplots, graphics, stats
Suggests: knitr, rmarkdown
Depends: R(>= 2.10.0)
VignetteBuilder: knitr
Packaged: 2015-12-24 05:47:56 UTC; Eric
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2015-12-24 13:46:48

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Package randomForestSRC updated to version 2.0.5 with previous version 2.0.0 dated 2015-12-07

Title: Random Forests for Survival, Regression and Classification (RF-SRC)
Description: A unified treatment of Breiman's random forests for survival, regression and classification problems based on Ishwaran and Kogalur's random survival forests (RSF) package. The package runs in both serial and parallel (OpenMP) modes. Now extended to include multivariate and unsupervised forests.
Author: Hemant Ishwaran <hemant.ishwaran@gmail.com>, Udaya B. Kogalur <ubk@kogalur.com>
Maintainer: Udaya B. Kogalur <ubk@kogalur.com>

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Package plotKML updated to version 0.5-4 with previous version 0.5-3 dated 2015-07-09

Title: Visualization of Spatial and Spatio-Temporal Objects in Google Earth
Description: Writes sp-class, spacetime-class, raster-class and similar spatial and spatio-temporal objects to KML following some basic cartographic rules.
Author: Tomislav Hengl [cre, aut], Pierre Roudier [ctb], Dylan Beaudette [ctb], Edzer Pebesma [ctb], Michael Blaschek [ctb]
Maintainer: Tomislav Hengl <tom.hengl@isric.org>

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New package multifwf with initial version 0.2.2
Package: multifwf
Type: Package
Title: Read Fixed Width Format Files Containing Lines of Different Type
Version: 0.2.2
Date: 2015-12-23
Author: Panos Rontogiannis
Maintainer: Panos Rontogiannis <p.g.ronto@gmail.com>
Description: Read a table of fixed width formatted data of different types into a data.frame for each type.
Depends: R (>= 3.1.1)
License: GPL (>= 2)
URL: https://github.com/prontog/multifwf
BugReports: https://github.com/prontog/multifwf/issues
RoxygenNote: 5.0.1
Imports: utils
Suggests: testthat
NeedsCompilation: no
Packaged: 2015-12-24 11:55:11 UTC; p.rontogiannis
Repository: CRAN
Date/Publication: 2015-12-24 13:46:32

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New package MediaK with initial version 1.0
Package: MediaK
Type: Package
Date: 2015-12-23
Title: Calculate MeDiA_K Distance
Version: 1.0
Author: Zizhuo Ren, Hesen Peng, Tianwei Yu
Maintainer: Zizhuo Ren<zizhuoren@gmail.com>
Description: Calculates MeDiA_K (means Mean Distance Association by K-nearest neighbor) in order to detect nonlinear associations.
License: GPL
LazyData: TRUE
Imports: Rcpp (>= 0.11.3)
LinkingTo: Rcpp, RcppEigen
Packaged: 2015-12-24 09:33:04 UTC; renzizhuo
NeedsCompilation: yes
Repository: CRAN
Date/Publication: 2015-12-24 13:46:16

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Package dynRB updated to version 0.5 with previous version 0.4 dated 2015-08-11

Title: Dynamic Range Boxes
Description: Improves the concept of multivariate range boxes, which is highly susceptible for outliers and does not consider the distribution of the data. The package uses dynamic range boxes to overcome these problems.
Author: Manuela Schreyer <manuelalarissa.schreyer@sbg.ac.at>, Wolfgang Trutschnig <Wolfgang.Trutschnig@sbg.ac.at>, Robert R. Junker <Robert.Junker@sbg.ac.at>, Jonas Kuppler <Jonas.Kuppler@uni-duesseldorf.de>, Arne Bathke <Arne.Bathke@sbg.ac.at>
Maintainer: Manuela Schreyer <manuelalarissa.schreyer@sbg.ac.at>

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Package DataCombine updated to version 0.2.18 with previous version 0.2.9 dated 2015-02-11

Title: Tools for Easily Combining and Cleaning Data Sets
Description: Tools for combining and cleaning data sets, particularly with grouped and time series data.
Author: Christopher Gandrud [aut, cre]
Maintainer: Christopher Gandrud <christopher.gandrud@gmail.com>

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Package apcluster updated to version 1.4.2 with previous version 1.4.1 dated 2014-12-09

Title: Affinity Propagation Clustering
Description: The 'apcluster' package implements Frey's and Dueck's Affinity Propagation clustering in R. The algorithms are largely analogous to the 'Matlab' code published by Frey and Dueck. The package further provides leveraged affinity propagation and an algorithm for exemplar-based agglomerative clustering that can also be used to join clusters obtained from affinity propagation. Various plotting functions are available for analyzing clustering results.
Author: Ulrich Bodenhofer, Johannes Palme, Chrats Melkonian, Andreas Kothmeier
Maintainer: Ulrich Bodenhofer <bodenhofer@bioinf.jku.at>

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Package XNomial updated to version 1.0.4 with previous version 1.0.1 dated 2014-02-08

Title: Exact Goodness-of-Fit Test for Multinomial Data with Fixed Probabilities
Description: Tests whether a set of counts fit a given expected ratio. For example, a genetic cross might be expected to produce four types in the relative frequencies of 9:3:3:1. To see whether a set of observed counts fits this expectation, one can examine all possible outcomes with xmulti() or a random sample of them with xmonte() and find the probability of an observation deviating from the expectation by at least as much as the observed. As a measure of deviation from the expected, one can use the log-likelihood ratio, the multinomial probability, or the classic chi-square statistic. A histogram of the test statistic can also be plotted and compared with the asymptotic curve.
Author: Bill Engels <wrengels@wisc.edu>
Maintainer: Bill Engels <wrengels@wisc.edu>

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Package ss3sim updated to version 0.9.0 with previous version 0.8.2 dated 2014-03-09

Title: Fisheries Stock Assessment Simulation Testing with Stock Synthesis
Description: The ss3sim package develops a framework for fisheries stock assessment simulation testing with Stock Synthesis 3 (SS3).
Author: Sean Anderson [aut, cre], Cole Monnahan [aut], Kelli Johnson [aut], Kotaro Ono [aut], Juan Valero [aut], Curry Cunningham [aut], Allan Hicks [aut], Felipe Hurtado-Ferro [aut], Peter Kuriyama [aut], Roberto Licandeo [aut], Carey McGilliard [aut], Melissa Muradian [ctb], Merrill Rudd [aut], Christine Stawitz [aut], Cody Szuwalski [aut], Ian Taylor [aut], Katyana Vert-pre [aut], Athol Whitten [aut]
Maintainer: Sean Anderson <sean@seananderson.ca>

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Permanent link

Package SchemaOnRead updated to version 1.0.2 with previous version 1.0.1 dated 2015-11-03

Title: Automated Schema on Read
Description: Provides schema-on-read tools including a single function call (e.g., schemaOnRead('filename')) that reads text ('TXT'), comma separated value ('CSV'), raster image ('BMP', 'PNG', 'GIF', 'TIFF', and 'JPG'), R data ('RDS'), HDF5 ('H5'), NetCDF ('CS'), spreadsheet ('XLS', 'XLSX', 'ODS', and 'DIF'), Weka Attribute-Relation File Format ('ARFF'), Epi Info ('REC'), SPSS ('SAV'), Systat ('SYS'), and Stata ('DTA') files. It also recursively reads folders (e.g., schemaOnRead('folder')), returning a nested list of the contained elements.
Author: Michael North [aut, cre]
Maintainer: Michael North <north@anl.gov>

Diff between SchemaOnRead versions 1.0.1 dated 2015-11-03 and 1.0.2 dated 2015-12-24

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More information about SchemaOnRead at CRAN
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New package cffdrs with initial version 1.7
Package: cffdrs
Type: Package
Title: Canadian Forest Fire Danger Rating System
Version: 1.7
Date: 2015-12-22
Author: Xianli Wang, Alan Cantin, Marc-Andre Parisien, Mike Wotton, Kerry Anderson, Brett Moore, and Mike Flannigan
Maintainer: Alan Cantin <Alan.Cantin@Canada.ca>
Depends: R(>= 3.2.2), rgdal, raster, foreach, data.table, spatial.tools
Imports: doParallel
Description: This project provides a group of new functions to calculate the outputs of the two main components of the Canadian Forest Fire Danger Rating System (CFFDRS) at various time scales: the Fire Weather Index (FWI) System and the Fire Behaviour Prediction (FBP) System. Some functions have two versions, table and raster based.
License: GPL-2
URL: https://r-forge.r-project.org/projects/cffdrs/
BugReports: https://r-forge.r-project.org/tracker/?func=browse&group_id=1970&atid=5372
Repository: CRAN
Repository/R-Forge/Project: cffdrs
Repository/R-Forge/Revision: 54
Repository/R-Forge/DateTimeStamp: 2015-12-23 18:11:16
Date/Publication: 2015-12-24 08:19:07
NeedsCompilation: no
Packaged: 2015-12-23 18:25:36 UTC; rforge

More information about cffdrs at CRAN
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Package brainGraph updated to version 0.55.0 with previous version 0.48.0 dated 2015-12-09

Title: Graph Theory Analysis of Brain MRI Data
Description: A set of tools for performing graph theory analysis of brain MRI data. It is best suited to data from a Freesurfer analysis (cortical thickness, volumes, local gyrification index, surface area), but also works with e.g., tractography data from FSL. It contains a graphical user interface for graph visualization and data exploration.
Author: Christopher G. Watson <cgwatson@bu.edu>
Maintainer: Christopher G. Watson <cgwatson@bu.edu>

Diff between brainGraph versions 0.48.0 dated 2015-12-09 and 0.55.0 dated 2015-12-24

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More information about brainGraph at CRAN
Permanent link


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