Title: Tools for Post-Selection Inference
Description: New tools for post-selection inference, for use
with forward stepwise regression, least angle regression, the
lasso, and the many means problem.
Author: Ryan Tibshirani, Rob Tibshirani, Jonathan Taylor,
Joshua Loftus, Stephen Reid
Maintainer: Rob Tibshirani <tibs@stanford.edu>
Diff between selectiveInference versions 1.1.1 dated 2015-09-30 and 1.1.2 dated 2015-12-27
selectiveInference-1.1.1/selectiveInference/man/estimateLambda.Rd |only selectiveInference-1.1.2/selectiveInference/DESCRIPTION | 20 selectiveInference-1.1.2/selectiveInference/MD5 | 50 selectiveInference-1.1.2/selectiveInference/NAMESPACE | 8 selectiveInference-1.1.2/selectiveInference/R/funs.fixed.R | 26 selectiveInference-1.1.2/selectiveInference/R/funs.fs.R | 171 +-- selectiveInference-1.1.2/selectiveInference/R/funs.groupfs.R | 554 +++++++--- selectiveInference-1.1.2/selectiveInference/R/funs.lar.R | 25 selectiveInference-1.1.2/selectiveInference/R/funs.quadratic.R | 267 ++-- selectiveInference-1.1.2/selectiveInference/man/estimateSigma.Rd | 40 selectiveInference-1.1.2/selectiveInference/man/factorDesign.Rd | 2 selectiveInference-1.1.2/selectiveInference/man/fixedLassoInf.Rd | 68 - selectiveInference-1.1.2/selectiveInference/man/forwardStop.Rd | 34 selectiveInference-1.1.2/selectiveInference/man/fs.Rd | 56 - selectiveInference-1.1.2/selectiveInference/man/fsInf.Rd | 64 - selectiveInference-1.1.2/selectiveInference/man/groupfs.Rd | 20 selectiveInference-1.1.2/selectiveInference/man/groupfsInf.Rd | 34 selectiveInference-1.1.2/selectiveInference/man/lar.Rd | 33 selectiveInference-1.1.2/selectiveInference/man/larInf.Rd | 53 selectiveInference-1.1.2/selectiveInference/man/manyMeans.Rd | 16 selectiveInference-1.1.2/selectiveInference/man/plot.fs.Rd | 25 selectiveInference-1.1.2/selectiveInference/man/plot.lar.Rd | 25 selectiveInference-1.1.2/selectiveInference/man/predict.fs.Rd | 25 selectiveInference-1.1.2/selectiveInference/man/predict.groupfs.Rd |only selectiveInference-1.1.2/selectiveInference/man/predict.lar.Rd | 25 selectiveInference-1.1.2/selectiveInference/man/scaleGroups.Rd | 12 selectiveInference-1.1.2/selectiveInference/man/selectiveInference.Rd | 201 +-- 27 files changed, 1068 insertions(+), 786 deletions(-)
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Title: SA Counterparty Credit Risk under Basel III
Description: Computes the Exposure-At-Default based on standardized approach of
the Basel III Regulatory framework (SA-CCR). It also includes an object-oriented
solution for the generation of the trades.
Author: Tasos Grivas
Maintainer: Tasos Grivas <info@openriskcalculator.com>
Diff between SACCR versions 1.0 dated 2015-10-11 and 1.1 dated 2015-12-27
DESCRIPTION | 21 +++++++++++---------- MD5 | 30 +++++++++++++++++------------- NAMESPACE | 3 ++- R/CSA.R |only R/CalcAddon.R | 24 +++++++++++++++++++++--- R/CalcRC.R | 20 ++++++++++++++++---- R/ExampleIRD.R | 1 + R/ExampleIRDCommMargined.R |only man/CSA-class.Rd |only man/CalcAddon.Rd | 4 +++- man/CalcRC.Rd | 6 +++++- man/Commodity-class.Rd | 1 + man/CreditIndex-class.Rd | 1 + man/CreditSingle-class.Rd | 1 + man/ExampleIRDCommMargined.Rd |only man/FXSwap-class.Rd | 1 + man/IRDSwap-class.Rd | 1 + man/IRDSwaption-class.Rd | 1 + 18 files changed, 82 insertions(+), 33 deletions(-)
Title: Work with QIIME Output Files in R
Description: Open QIIME output files in R, compute statistics, and
create plots from the data.
Author: Kyle Bittinger <kylebittinger@gmail.com>
Maintainer: Kyle Bittinger <kylebittinger@gmail.com>
Diff between qiimer versions 0.9.2 dated 2014-01-02 and 0.9.4 dated 2015-12-27
DESCRIPTION | 14 ++++----- MD5 | 60 ++++++++++++++++++++--------------------- NAMESPACE | 5 +++ R/biom.R | 2 - R/otu_table.R | 44 +++++++++++++----------------- R/qiimer.R | 3 ++ man/biom_raw_data.Rd | 36 +++++++++++------------- man/biom_taxonomy.Rd | 44 +++++++++++++----------------- man/dist_get.Rd | 13 ++++---- man/dist_groups.Rd | 20 ++++++------- man/dist_subset.Rd | 13 ++++---- man/make_otu_table.Rd | 14 ++++----- man/otu_heatmap.Rd | 53 +++++++++++++++++------------------- man/qiimer.Rd | 4 ++ man/rarefaction_stats.Rd | 15 ++++------ man/read_blast_table.Rd | 10 ++++-- man/read_qiime_distmat.Rd | 10 ++++-- man/read_qiime_mapping_file.Rd | 19 ++++++------ man/read_qiime_otu_mapping.Rd | 13 ++++---- man/read_qiime_otu_table.Rd | 31 +++++++++++---------- man/read_qiime_rarefaction.Rd | 12 ++++---- man/relmbeta.Rd | 43 +++++++++++++---------------- man/relmbeta_alpha.Rd | 19 ++++++------ man/relmbeta_assignments.Rd | 18 ++++++------ man/relmbeta_biom.Rd | 21 ++++++-------- man/relmbeta_counts.Rd | 21 ++++++-------- man/relmbeta_dist.Rd | 19 ++++++------ man/saturated_rainbow.Rd | 47 +++++++++++++++----------------- man/simplify_assignments.Rd | 20 ++++++------- man/split_assignments.Rd | 24 +++++++--------- man/taxonomic_ranks.Rd | 8 +++-- 31 files changed, 335 insertions(+), 340 deletions(-)
Title: Environments Behaving (Almost) as Lists
Description: List environments are environments that have list-like properties. For instance, the elements of a list environment are ordered and can be accessed and iterated over using index subsetting, e.g. 'x <- listenv(a=1, b=2); for (i in seq_along(x)) x[[i]] <- x[[i]]^2; y <- as.list(x)'.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Diff between listenv versions 0.5.0 dated 2015-10-30 and 0.6.0 dated 2015-12-27
DESCRIPTION | 11 MD5 | 50 ++- NAMESPACE | 9 NEWS | 9 R/get_variable.R | 36 ++ R/listenv.R | 485 ++++++++++++++++++++++++++++++------ R/parse_env_subset.R | 257 ++++++++++++++----- R/undim.R |only R/utils.R | 2 build/vignette.rds |binary inst/doc/listenv.html | 463 +++++++++++++++++++++++++++------- inst/doc/listenv.md.rsp | 422 +++++++++++++++++++++++-------- man/as.list.listenv.Rd | 2 man/cash-.listenv.Rd | 2 man/cash-set-.listenv.Rd | 2 man/get_variable.Rd | 2 man/length.listenv.Rd | 2 man/listenv.Rd | 2 man/map.Rd | 40 +- man/names.listenv.Rd | 2 man/parse_env_subset.Rd | 48 +-- man/undim.Rd |only tests/get_variable,dimensions.R |only tests/listenv,dimensions.R |only tests/listenv.R | 70 +++++ tests/parse_env_subset,dimensions.R |only tests/parse_env_subset.R | 76 +++++ tests/undim.R |only vignettes/listenv.md.rsp | 422 +++++++++++++++++++++++-------- 29 files changed, 1878 insertions(+), 536 deletions(-)
Title: Less Code, More Results
Description: Each function accomplishes the work of several or more standard R functions. For example, two function calls, Read() and CountAll(), read the data and generate summary statistics for all variables in the data frame, plus histograms and bar charts as appropriate. Other functions provide for descriptive statistics, a comprehensive regression analysis, analysis of variance and t-test, plotting, bar chart, histogram, box plot, density curves, calibrated power curve, reading multiple data formats with the same function, variable labels, color themes, and a built-in help system. A confirmatory factor analysis of multiple indicator measurement models is also available as are pedagogical routines for data simulation such as for the Central Limit Theorem. Compatible with 'RStudio' and 'knitr' including generation of 'knitr' instructions for interpretative output.
Author: David W. Gerbing, School of Business Administration, Portland State University
Maintainer: David W. Gerbing <gerbing@pdx.edu>
Diff between lessR versions 3.3.6 dated 2015-11-05 and 3.4 dated 2015-12-27
DESCRIPTION | 14 - MD5 | 99 +++++++------- NAMESPACE | 7 NEWS | 125 ++++++++++++++++- R/ANOVAz1.R | 2 R/BarChart.R | 4 R/Help.R | 296 +++++++++++++++++++++--------------------- R/Histogram.R | 15 +- R/Logit.R | 51 +++---- R/Merge.R | 2 R/Read.R | 158 +++++++++++++--------- R/Regression.R | 51 +------ R/ScatterPlot.R | 49 +++++- R/SummaryStats.R | 100 +++++--------- R/VariableLabels.R |only R/bc.data.frame.R | 5 R/bc.zmain.R | 159 +++++++++------------- R/details.R | 118 ++++++++-------- R/dist.zknitr.R | 24 ++- R/hst.zmain.R | 10 - R/logit.z4Pred.R | 2 R/pc.zmain.R | 40 +++-- R/plt.zmain.R | 134 +++++++++++-------- R/reg.z2Relations.R | 46 +++--- R/reg.z3resfitResidual.R | 3 R/reg.z5Plot.R | 5 R/set.R | 24 +-- R/ss.zdata.frame.R | 14 + R/ss.zfactor.R | 58 ++++++-- R/tt.z1group.R | 2 R/tt.z2group.R | 5 R/tt.zformula.R | 4 R/ttest.R | 330 +++-------------------------------------------- R/ttp2zgraph.R | 3 R/vl.R |only R/zzz.R | 209 ++++++++++++++++++++++++----- data/dataEmployee.rda |binary data/dataMach4.rda |binary man/BarChart.Rd | 5 man/Histogram.Rd | 3 man/Nest.Rd | 5 man/Read.Rd | 19 +- man/Recode.Rd | 2 man/Regression.Rd | 6 man/ScatterPlot.Rd | 19 +- man/Transform.Rd | 11 - man/VariableLabels.Rd |only man/Write.Rd | 4 man/dataEmployee.Rd | 6 man/dataMach4.Rd | 40 ++--- man/label.Rd | 4 man/ttest.Rd | 3 52 files changed, 1179 insertions(+), 1116 deletions(-)
Title: Learning Algorithms for Dynamic Treatment Regimes
Description: Dynamic treatment regimens (DTRs) are sequential decision rules tailored at each stage by time-varying subject-specific features and intermediate outcomes observed in previous stages. This package implements three methods: O-learning (Zhao et. al. 2012,2014), Q-learning (Murphy et. al. 2007; Zhao et.al. 2009) and P-learning (Liu et. al. 2014, 2015) to estimate the optimal DTRs.
Author: Ying Liu, Yuanjia Wang, Donglin Zeng
Maintainer: Ying Liu <yl2802@cumc.columbia.edu>
Diff between DTRlearn versions 1.1 dated 2015-10-28 and 1.2 dated 2015-12-27
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- NAMESPACE | 3 ++- 3 files changed, 8 insertions(+), 7 deletions(-)
Title: Calculate and Analyze Blau Status for Measuring Social Distance
Description: An integrated set of tools to calculate and analyze Blau statuses quantifying social distance between individuals belonging to organizations. Relational (network) data may be incorporated for additional analyses.
Author: Cheng Wang*, Michael Genkin*, George Berry, Liyuan Chen, Matthew Brashears *Both authors contributed equally to this work and their names are randomly ordered
Maintainer: Cheng Wang <cwang3@nd.edu>
Diff between Blaunet versions 1.0.1 dated 2014-04-14 and 2.0.1 dated 2015-12-27
DESCRIPTION | 16 ++--- MD5 | 38 ++++++++---- NAMESPACE | 2 R/calc.dyadic.R | 110 +++++++++++++++++------------------ R/calc.niches.R | 153 ++++++++++++++++++++++++------------------------- R/ecology.summary.R | 97 ++++++++++++++++--------------- R/niche.summary.R | 94 ++++++++++++++++-------------- data/TwoCities.rda |binary data/gss74_87.rda |only data/schlattr.rda |only data/schlnet.rda |only inst |only man/BSANet.Rd | 5 - man/TwoCities.Rd | 6 - man/blaunet-package.Rd | 24 ++++--- man/gss74_87.Rd |only man/schlattr.Rd |only man/schlnet.Rd |only 18 files changed, 293 insertions(+), 252 deletions(-)
Title: A GUI for Missing Data Exploration
Description: Provides numeric and graphical
summaries for the missing values from both categorical
and quantitative variables. A variety of imputation
methods are applied, including the univariate imputations
like fixed or random values, multivariate imputations
like the nearest neighbors and multiple imputations,
and imputations conditioned on a categorical variable.
Author: Xiaoyue Cheng, Dianne Cook, Heike Hofmann
Maintainer: Xiaoyue Cheng <xycheng@unomaha.edu>
Diff between MissingDataGUI versions 0.2-2 dated 2014-09-14 and 0.2-4 dated 2015-12-27
DESCRIPTION | 17 ++-- MD5 | 43 +++++----- NAMESPACE | 20 ++++- NEWS | 12 +++ R/MissingDataGUI-package.r | 9 +- R/MissingDataGUI.r | 4 - R/WatchMissingValues.r | 166 +++++++++++++++++++++--------------------- R/imputation.r | 82 +++++++++----------- R/utils.r | 48 ++++++------ build/vignette.rds |binary inst/CITATION |only inst/doc/introduction.Rnw | 2 inst/doc/introduction.pdf |binary man/MissingDataGUI-package.Rd | 9 +- man/MissingDataGUI.Rd | 20 ++--- man/WatchMissingValues.Rd | 20 ++--- man/brfss.Rd | 10 +- man/compute_missing_pct.Rd | 6 - man/imputation.Rd | 10 +- man/scale_colour_discrete.Rd | 3 man/scale_fill_discrete.Rd | 3 man/tao.Rd | 8 +- vignettes/introduction.Rnw | 2 23 files changed, 262 insertions(+), 232 deletions(-)
More information about MissingDataGUI at CRAN
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Title: A Google Analytics API Client
Description: Provides functions for accessing and retrieving data from the
Google Analytics APIs (https://developers.google.com/analytics/). Supports
OAuth 2.0 authorization. Package provides access to the Management, Core
Reporting, Multi-Channel Funnels Reporting, Real Time Reporting and
Metadata APIs. Access to all the Google Analytics accounts which the user
has access to. Auto-pagination to return more than 10,000 rows of the
results by combining multiple data requests. Also package provides
shiny app to explore the core reporting API dimensions and metrics.
Author: Artem Klevtsov [aut, cre],
Philipp Upravitelev [ctb],
Olga Shramko [ctb]
Maintainer: Artem Klevtsov <a.a.klevtsov@gmail.com>
Diff between RGA versions 0.3.1 dated 2015-12-01 and 0.3.2 dated 2015-12-27
DESCRIPTION | 8 ++++---- MD5 | 32 ++++++++++++++++---------------- R/auth.R | 6 +++--- R/date-ranges.R | 29 ++++++++++++++++++----------- R/ga.R | 8 +++----- R/mcf.R | 8 +++----- R/realtime.R | 3 ++- R/report.R | 12 +++++++++--- build/vignette.rds |binary data/ga.rda |binary inst/NEWS.Rd | 9 +++++++++ man/authorize.Rd | 4 ++-- man/get_ga.Rd | 10 +++++----- man/get_mcf.Rd | 2 +- man/get_profile.Rd | 3 ++- man/get_realtime.Rd | 6 +++--- man/list_profiles.Rd | 3 ++- 17 files changed, 82 insertions(+), 61 deletions(-)
Title: Numerical Weather Predictions
Description: Access to several Numerical Weather Prediction services both in raster format and as a time series for a location. Currently it works with GFS, MeteoGalicia, NAM, and RAP.
Author: Oscar Perpinan Lamigueiro [cre, aut],
Marcelo Pinho Almeida [ctb]
Maintainer: Oscar Perpinan Lamigueiro <oscar.perpinan@gmail.com>
Diff between meteoForecast versions 0.48 dated 2015-10-22 and 0.49 dated 2015-12-27
ChangeLog | 15 +++++++++++---- DESCRIPTION | 12 ++++++------ MD5 | 18 +++++++++--------- NAMESPACE | 5 ----- R/composeURL.R | 18 +++++++++--------- R/misc.R | 41 ++++++++++++++++++++++++++++++----------- R/pointMeteoGalicia.R | 2 +- man/getPoint.Rd | 23 +++++++++++++++-------- man/getRaster.Rd | 22 +++++++++++++--------- man/vars.Rd | 10 +++++----- 10 files changed, 99 insertions(+), 67 deletions(-)