Title: Quantitative Analysis Made Accessible
Description: Contains a number of functions that serve
two goals: first, make R more accessible to people migrating from
SPSS by adding a number of functions that behave roughly like their
SPSS equivalents; and second, make a number of slightly more
advanced functions more user friendly to relatively novice users.
Author: Gjalt-Jorn Peters
Maintainer: Gjalt-Jorn Peters <gjalt-jorn@userfriendlyscience.com>
Diff between userfriendlyscience versions 0.3-0 dated 2015-04-20 and 0.4-0 dated 2016-01-21
userfriendlyscience-0.3-0/userfriendlyscience/R/associationMatrix.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/basicSPSStranslationFunctions.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/confIntV.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/convert.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/crossTab.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/didacticPlot.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/dlvPlot.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/freq.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/itemInspection.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/meanDiff.multi.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/meanDiff.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/normalityAssessment.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/oddsratio.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/oneway.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/posthocTGH.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/powerHist.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/rMatrix.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/regr.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/rnwString.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/scaleDiagnosis.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/scaleDiagnosisToPDF.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/scaleInspection.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/scaleStructure.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/scatterMatrix.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/testRetestAlpha.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/testRetestCES.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/testRetestReliability.r |only userfriendlyscience-0.3-0/userfriendlyscience/R/userfriendlyscience.r |only 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userfriendlyscience-0.4-0/userfriendlyscience/R/safeRequire.R |only userfriendlyscience-0.4-0/userfriendlyscience/R/scaleDiagnosis.R |only userfriendlyscience-0.4-0/userfriendlyscience/R/scaleDiagnosisToPDF.R |only userfriendlyscience-0.4-0/userfriendlyscience/R/scaleInspection.R |only userfriendlyscience-0.4-0/userfriendlyscience/R/scaleStructure.R |only userfriendlyscience-0.4-0/userfriendlyscience/R/scatterMatrix.R |only userfriendlyscience-0.4-0/userfriendlyscience/R/sort.associationMatrix.R |only userfriendlyscience-0.4-0/userfriendlyscience/R/testRetestAlpha.R |only userfriendlyscience-0.4-0/userfriendlyscience/R/testRetestCES.R |only userfriendlyscience-0.4-0/userfriendlyscience/R/testRetestReliability.R |only userfriendlyscience-0.4-0/userfriendlyscience/R/therapyMonitor.R |only userfriendlyscience-0.4-0/userfriendlyscience/R/therapyMonitor.multi.R |only userfriendlyscience-0.4-0/userfriendlyscience/R/trim.R |only 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More information about userfriendlyscience at CRAN
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Title: Wrapper for MUMPS Library
Description: Exported class can be used for storing sparse matrix
and solving corresponding linear system with one or many right
hand sides. There is a possibility to do separately symbolic analysis,
LU factorization and system solving.
Author: Serguei Sokol
Maintainer: Serguei Sokol <sokol@insa-toulouse.fr>
Diff between rmumps versions 5.0.1.6 dated 2016-01-21 and 5.0.1.7 dated 2016-01-21
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- NEWS | 8 +++++--- man/rmumps-package.Rd | 2 +- src/rmumps_module.cpp | 22 +++++++++++++++++++--- 5 files changed, 33 insertions(+), 15 deletions(-)
Title: Feature-Based Landscape Analysis of Continuous and Constraint
Optimization Problems
Description: Contains tools and features, which can be used for an exploratory
landscape analysis of continuous optimization problems. Those are able to
quantify rather complex properties, such as the global structure,
separability, etc., of continuous optimization problems.
Author: Pascal Kerschke [aut, cre],
Jan Dagefoerde [aut]
Maintainer: Pascal Kerschke <kerschke@uni-muenster.de>
Diff between flacco versions 1.1 dated 2015-11-26 and 1.2 dated 2016-01-21
DESCRIPTION | 8 +++---- MD5 | 12 +++++----- NEWS | 3 ++ R/feature_ela_local_search.R | 6 ++--- tests/testthat/Rplots.pdf |binary tests/testthat/test-calculateFeatures.R | 36 ++++++++++++++++---------------- tests/testthat/test-ela-Levelset.R | 2 - 7 files changed, 35 insertions(+), 32 deletions(-)
Title: Write Formatted Tables in Excel Workbooks
Description: Some functions are included in this package for writing tables in Excel format suitable for distribution.
Author: Jesus Maria Rodriguez Rodriguez
Maintainer: Jesus Maria Rodriguez Rodriguez <jesusmro@ono.com>
Diff between tablaxlsx versions 1.0.3 dated 2015-12-05 and 1.0.4 dated 2016-01-21
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- R/reducir.R | 3 +++ 3 files changed, 9 insertions(+), 6 deletions(-)
Title: Mixed Models, Particularly Spatial GLMMs
Description: Inference in mixed models, including GLMMs with spatial correlations and models with non-Gaussian random effects (e.g., Beta Binomial, or negative-binomial mixed models). Heteroskedasticity can further be fitted by a linear model. The algorithms are currently various Laplace approximations methods for ML or REML, in particular h-likelihood and penalized-likelihood methods.
Author: François Rousset [aut, cre, cph],
Jean-Baptiste Ferdy [aut, cph],
Alexandre Courtiol [ctb],
GSL authors [ctb] (src/gsl_bessel.*)
Maintainer: François Rousset <francois.rousset@univ-montp2.fr>
Diff between spaMM versions 1.6.2 dated 2015-11-01 and 1.7.1 dated 2016-01-21
DESCRIPTION | 10 MD5 | 100 ++++----- NAMESPACE | 5 R/HLCor.R | 14 - R/HLFactorList.R | 2 R/HLfit.R | 316 +++++++++++++++++------------- R/HLfit_Internals.R | 338 +++++++++++++++++--------------- R/HLframes.R | 131 +++++++----- R/LevenbergMstep.R | 4 R/MakeCovEst.R | 8 R/SEMbetalambda.R | 22 +- R/auglinmodfit.R | 11 - R/calc.p_v.R | 8 R/corrHLfit.R | 86 ++++++-- R/corrMM.LRT.R | 24 +- R/correlationFns.R | 120 ++++------- R/dispGammaGLM.R |only R/extractors.R | 59 ++++- R/generateName.R | 30 +- R/is.diagonal.R | 19 + R/iterateSmooth.R | 183 ++++++++++------- R/locoptim.R | 7 R/migraineLike.R | 190 +++++++++++++++++- R/multinomial.R | 24 +- R/predict.R | 399 +++++++++++++++++++++++++------------- R/preprocess.R | 48 +++- R/simulate.HL.R | 2 R/summary.HL.R | 144 +++++++------ data/Loaloa.RData |binary data/blackcap.RData |binary data/salamander.RData |binary data/scotlip.RData |binary data/seeds.RData |binary data/wafers.RData |binary data/welding.RData |binary inst/NEWS.Rd | 24 ++ man/HLCor.Rd | 7 man/HLfit.Rd | 2 man/autoregressive.Rd | 7 man/corrHLfit.Rd | 4 man/extractors.Rd | 4 man/multinomial.Rd | 4 man/predict.Rd | 16 - man/raster.Rd | 1 man/spaMM-internal.Rd | 20 + src/RcppExports.cpp | 1 src/spaMM_linear.cpp | 20 + tests/testthat/test-Nugget.R | 2 tests/testthat/test-corrHLfit.txt |only tests/testthat/test-fixedLRT.R | 2 tests/testthat/test-predVar.R | 37 +++ tests/testthat/test-sp-nsp.R | 9 52 files changed, 1571 insertions(+), 893 deletions(-)
Title: Statistical Toolbox for Sedimentary Provenance Analysis
Description: Bundles a number of established statistical methods to facilitate
the visual interpretation of large datasets in sedimentary geology. Includes
functionality for adaptive kernel density estimation, multidimensional scaling,
generalised procrustes analysis and individual differences scaling using a
variety of dissimilarity measures. Univariate provenance proxies, such as
single-grain ages or (isotopic) compositions are compared with the Kolmogorov-
Smirnov dissimilarity and Sircombe-Hazelton L2-norm. Categorical provenance
proxies, such as mineralogical, petrographic or chemical compositions are
compared with the Aitchison and Bray-Curtis distances. Also included are tools
to plot compositional data on ternary diagrams, to calculate the sample size
required for specified levels of statistical precision, and to assess the
effects of hydraulic sorting on detrital compositions. Includes an intuitive
query-based user interface for users who are not proficient in R.
Author: Pieter Vermeesch [aut, cre]
Maintainer: Pieter Vermeesch <p.vermeesch@ucl.ac.uk>
Diff between provenance versions 1.1 dated 2016-01-03 and 1.2 dated 2016-01-21
DESCRIPTION | 8 +-- MD5 | 16 ++++--- NAMESPACE | 2 R/gui.R | 116 +++++++++++++++++++++++++++++++++++++----------------- R/indscal.R |only R/plot.R | 4 - R/provenance.R | 89 ++++++++++++++--------------------------- man/combine.Rd |only man/indscal.Rd | 4 - man/provenance.Rd | 6 +- 10 files changed, 132 insertions(+), 113 deletions(-)
Title: A Powerful Tool to Quickly Compare Huge Lists and Draw Venn
Diagrams
Description: Compare lists (from 2 to infinite) and plot the results in a Venn diagram if (N<=4) with regulation details. It allows to produce a complete annotated file, merging the annotations of the compared lists. It is also possible to compute an overlaps table to show the overlaps proportions of all the couples of lists and draw proportional Venn diagrams.
Author: Nicolas Cagnard
Maintainer: Nicolas Cagnard <nicolas.cagnard@gmail.com>
Diff between eVenn versions 2.2.2 dated 2015-11-12 and 2.2.3 dated 2016-01-21
DESCRIPTION | 8 MD5 | 14 - R/autoevenn.R | 4 R/evenn.R | 607 +++++++++++++++++++++++++-------------------------- R/man.evenn.R | 18 - man/autoevenn.Rd | 20 + man/eVenn-package.Rd | 4 man/evenn.Rd | 34 ++ 8 files changed, 370 insertions(+), 339 deletions(-)
Title: Structure for Organizing Monte Carlo Simulation Designs
Description: Provides tools to help safely and efficiently organize Monte Carlo simulations in R.
The package controls the structure and back-end of Monte Carlo simulations
by utilizing a general generate-analyse-summarise strategy. The functions provided control
common simulation issues such as re-simulating non-convergent results, support parallel
back-end and MPI distributed computations, save and restore temporary files,
aggregate results across independent nodes, and provide native support for debugging.
Author: Phil Chalmers [aut, cre]
Maintainer: Phil Chalmers <rphilip.chalmers@gmail.com>
Diff between SimDesign versions 0.5 dated 2015-12-22 and 0.6 dated 2016-01-21
SimDesign-0.5/SimDesign/man/check_error.Rd |only SimDesign-0.6/SimDesign/DESCRIPTION | 16 - SimDesign-0.6/SimDesign/MD5 | 19 +- SimDesign-0.6/SimDesign/NAMESPACE | 1 SimDesign-0.6/SimDesign/R/analysis.R | 5 SimDesign-0.6/SimDesign/R/functions.R | 29 +-- SimDesign-0.6/SimDesign/R/runSimulation.R | 165 +++++++++++-------- SimDesign-0.6/SimDesign/R/util.R | 36 ---- SimDesign-0.6/SimDesign/man/analyse.Rd | 21 +- SimDesign-0.6/SimDesign/man/runSimulation.Rd | 113 +++++++------ SimDesign-0.6/SimDesign/tests/tests/test-SimDesign.R | 30 +-- 11 files changed, 228 insertions(+), 207 deletions(-)
Title: Perform Common JavaScript Operations in Shiny Apps using Plain R
Code
Description: Perform common JavaScript operations in Shiny applications without
having to know any JavaScript. Examples include: hiding an element, disabling
an input, resetting an input back to its original value, delaying code execution
by a few seconds, and many more useful functions. 'shinyjs' can also be used to
easily run your own custom JavaScript functions from R.
Author: Dean Attali [aut, cre]
Maintainer: Dean Attali <daattali@gmail.com>
Diff between shinyjs versions 0.3.1 dated 2016-01-06 and 0.4.0 dated 2016-01-21
shinyjs-0.3.1/shinyjs/R/jsFunc-text.R |only shinyjs-0.3.1/shinyjs/man/text.Rd |only shinyjs-0.4.0/shinyjs/DESCRIPTION | 8 - shinyjs-0.4.0/shinyjs/MD5 | 90 +++++++------- shinyjs-0.4.0/shinyjs/NAMESPACE | 2 shinyjs-0.4.0/shinyjs/NEWS.md | 20 +++ shinyjs-0.4.0/shinyjs/R/colourInput.R | 46 +++---- shinyjs-0.4.0/shinyjs/R/delay.R | 9 + shinyjs-0.4.0/shinyjs/R/disabled.R | 14 +- shinyjs-0.4.0/shinyjs/R/hidden.R | 18 +- shinyjs-0.4.0/shinyjs/R/inlineCSS.R | 14 +- shinyjs-0.4.0/shinyjs/R/jsFunc-aaa.R | 26 ++++ shinyjs-0.4.0/shinyjs/R/jsFunc-classFuncs.R | 57 +++++--- shinyjs-0.4.0/shinyjs/R/jsFunc-html.R |only shinyjs-0.4.0/shinyjs/R/jsFunc-messageFuncs.R | 27 ++-- shinyjs-0.4.0/shinyjs/R/jsFunc-runjs.R | 20 +-- shinyjs-0.4.0/shinyjs/R/jsFunc-stateFuncs.R | 63 +++++---- shinyjs-0.4.0/shinyjs/R/jsFunc-visibilityFuncs.R | 69 +++++----- shinyjs-0.4.0/shinyjs/R/onevent.R | 29 +++- shinyjs-0.4.0/shinyjs/R/reset.R | 28 +++- shinyjs-0.4.0/shinyjs/R/useShinyjs.R | 17 +- shinyjs-0.4.0/shinyjs/R/utils.R | 8 - shinyjs-0.4.0/shinyjs/README.md | 37 ++++- shinyjs-0.4.0/shinyjs/inst/doc/overview.Rmd | 22 ++- shinyjs-0.4.0/shinyjs/inst/doc/overview.html | 28 +++- shinyjs-0.4.0/shinyjs/inst/examples/basic/app.R | 2 shinyjs-0.4.0/shinyjs/inst/examples/basic/helper-text.R | 4 shinyjs-0.4.0/shinyjs/inst/examples/demo/helpers.R | 8 - shinyjs-0.4.0/shinyjs/inst/examples/demo/server.R | 6 shinyjs-0.4.0/shinyjs/inst/examples/sandbox/helpers.R | 6 shinyjs-0.4.0/shinyjs/inst/examples/sandbox/server.R | 10 - shinyjs-0.4.0/shinyjs/inst/srcjs/shinyjs-default-funcs.js | 15 +- shinyjs-0.4.0/shinyjs/man/classFuncs.Rd | 48 +++---- shinyjs-0.4.0/shinyjs/man/colourInput.Rd | 24 +-- shinyjs-0.4.0/shinyjs/man/delay.Rd | 1 shinyjs-0.4.0/shinyjs/man/disabled.Rd | 14 +- shinyjs-0.4.0/shinyjs/man/hidden.Rd | 18 +- shinyjs-0.4.0/shinyjs/man/html.Rd |only shinyjs-0.4.0/shinyjs/man/inlineCSS.Rd | 14 +- shinyjs-0.4.0/shinyjs/man/messageFuncs.Rd | 19 +- shinyjs-0.4.0/shinyjs/man/onevent.Rd | 12 + shinyjs-0.4.0/shinyjs/man/reset.Rd | 4 shinyjs-0.4.0/shinyjs/man/runjs.Rd | 16 +- shinyjs-0.4.0/shinyjs/man/stateFuncs.Rd | 51 +++---- shinyjs-0.4.0/shinyjs/man/updateColourInput.Rd | 22 +-- shinyjs-0.4.0/shinyjs/man/useShinyjs.Rd | 19 +- shinyjs-0.4.0/shinyjs/man/visibilityFuncs.Rd | 60 ++++----- shinyjs-0.4.0/shinyjs/vignettes/overview.Rmd | 22 ++- 48 files changed, 619 insertions(+), 428 deletions(-)
Title: Manipulations of Triangular Meshes Based on the 'VCGLIB' API
Description: Operations on triangular meshes based on 'VCGLIB'. This package
integrates nicely with the R-package 'rgl' to render the meshes processed by
'Rvcg'. The Visualization and Computer Graphics Library (VCG for short) is
an open source portable C++ templated library for manipulation, processing
and displaying with OpenGL of triangle and tetrahedral meshes. The library,
composed by more than 100k lines of code, is released under the GPL license,
and it is the base of most of the software tools of the Visual Computing Lab of
the Italian National Research Council Institute ISTI (http://vcg.isti.cnr.it),
like 'metro' and 'MeshLab'. The 'VCGLIB' source is pulled from trunk (svn://
svn.code.sf.net/p/vcg/code/trunk/vcglib) and patched to work with options
determined by the configure script as well as to work with the header files
included by 'RcppEigen'.
Author: Stefan Schlager; the authors of VCGLIB for the included version of the
code
Maintainer: Stefan Schlager <zarquon42@gmail.com>
Diff between Rvcg versions 0.13.1.1 dated 2015-12-31 and 0.13.1.2 dated 2016-01-21
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ R/Rvcg-package.R | 4 ++-- inst/NEWS.Rd | 9 +++++++++ man/Rvcg-package.Rd | 4 ++-- src/Rkdtree.cpp | 4 ++-- src/RvcgKD.h | 4 ++-- 7 files changed, 27 insertions(+), 18 deletions(-)
Title: Response Surface Analysis
Description: Advanced response surface analysis. The main function RSA computes
and compares several nested polynomial regression models (full polynomial,
shifted and rotated squared differences, rising ridge surfaces, basic
squared differences). The package provides plotting functions for 3d
wireframe surfaces, interactive 3d plots, and contour plots. Calculates
many surface parameters (a1 to a4, principal axes, stationary point,
eigenvalues) and provides standard, robust, or bootstrapped standard errors
and confidence intervals for them.
Author: Felix Schönbrodt
Maintainer: Felix Schönbrodt <felix@nicebread.de>
Diff between RSA versions 0.9.8 dated 2015-03-23 and 0.9.9 dated 2016-01-21
DESCRIPTION | 11 ++++++----- MD5 | 49 +++++++++++++++++++++++++------------------------ NAMESPACE | 24 +++++++++++++++++++++++- R/RSA.R | 6 ++++-- R/RSA.ST.R | 18 ++++++++++++++---- R/confint.R | 1 + R/imports.R |only R/modeltree.R | 1 + R/plot.RSA.R | 7 ++++--- inst/CITATION | 4 ++-- inst/NEWS.Rd | 19 +++++++++++++++++++ man/RSA.Rd | 10 ++++++---- man/RSA.ST.Rd | 22 ++++++++++++++++------ man/aictab.Rd | 2 +- man/compare.Rd | 2 +- man/compare2.Rd | 2 +- man/confint.RSA.Rd | 3 ++- man/demoRSA.Rd | 2 +- man/fitted.RSA.Rd | 2 +- man/getPar.Rd | 3 ++- man/modeltree.Rd | 2 +- man/motcon.Rd | 2 +- man/motcon2.Rd | 2 +- man/movieRSA.Rd | 20 ++++++++++---------- man/plotRSA.Rd | 31 +++++++++++++++---------------- man/residuals.RSA.Rd | 2 +- 26 files changed, 159 insertions(+), 88 deletions(-)
Title: Precipitation Intensity, Concentration and Anomaly Analysis
Description: Contains functions to analyze the precipitation
intensity, concentration and anomaly.
Author: Lucas Venezian Povoa [aut, cre],
Jonas Teixeira Nery [ctb]
Maintainer: Lucas Venezian Povoa <lucasvenez@gmail.com>
Diff between precintcon versions 2.1 dated 2015-02-19 and 2.2.1 dated 2016-01-21
precintcon-2.1/precintcon/R/precintcon.trend.test.r |only precintcon-2.1/precintcon/TODO |only precintcon-2.2.1/precintcon/DESCRIPTION | 40 - precintcon-2.2.1/precintcon/MD5 | 202 ++++--- precintcon-2.2.1/precintcon/NAMESPACE | 163 +++--- precintcon-2.2.1/precintcon/R/app.r |only precintcon-2.2.1/precintcon/R/as.annual.r | 71 +- precintcon-2.2.1/precintcon/R/as.daily.r | 197 +++---- precintcon-2.2.1/precintcon/R/as.decade.r | 72 +- precintcon-2.2.1/precintcon/R/as.deciles.r | 86 +-- precintcon-2.2.1/precintcon/R/as.fd.r | 92 +-- precintcon-2.2.1/precintcon/R/as.monthly.r | 64 +- precintcon-2.2.1/precintcon/R/as.precintcon.annual.r | 32 - precintcon-2.2.1/precintcon/R/as.precintcon.daily.r | 44 - precintcon-2.2.1/precintcon/R/as.precintcon.decade.r | 34 - precintcon-2.2.1/precintcon/R/as.precintcon.deciles.r | 28 - precintcon-2.2.1/precintcon/R/as.precintcon.fd.r | 28 - precintcon-2.2.1/precintcon/R/as.precintcon.monthly.r | 46 - precintcon-2.2.1/precintcon/R/as.precintcon.seasonal.r | 45 + precintcon-2.2.1/precintcon/R/as.seasonal.r | 70 +- precintcon-2.2.1/precintcon/R/ci.per.year.r | 68 +- precintcon-2.2.1/precintcon/R/ci.r | 98 +-- precintcon-2.2.1/precintcon/R/cv.r |only precintcon-2.2.1/precintcon/R/deciles.r | 6 precintcon-2.2.1/precintcon/R/ff.index.r |only precintcon-2.2.1/precintcon/R/limits.r | 68 +- precintcon-2.2.1/precintcon/R/pci.r | 67 +- precintcon-2.2.1/precintcon/R/pci.seasonal.r |only precintcon-2.2.1/precintcon/R/pci.supraseasonal.r |only precintcon-2.2.1/precintcon/R/pn.r | 86 +-- precintcon-2.2.1/precintcon/R/pplot.deciles.r | 135 ++--- precintcon-2.2.1/precintcon/R/pplot.histogram.r | 135 ++--- precintcon-2.2.1/precintcon/R/pplot.lorenz.r | 156 +++-- precintcon-2.2.1/precintcon/R/pplot.pci.r | 122 ++-- precintcon-2.2.1/precintcon/R/pplot.pn.r | 139 ++--- precintcon-2.2.1/precintcon/R/pplot.rai.r | 130 ++-- precintcon-2.2.1/precintcon/R/pplot.spi.r | 141 ++--- precintcon-2.2.1/precintcon/R/precintcon.H.r | 42 - precintcon-2.2.1/precintcon/R/precintcon.Z.r | 106 +-- precintcon-2.2.1/precintcon/R/precintcon.b.r | 58 +- precintcon-2.2.1/precintcon/R/precintcon.ci.analysis.r | 106 +-- precintcon-2.2.1/precintcon/R/precintcon.ci.per.year.analysis.r | 60 +- precintcon-2.2.1/precintcon/R/precintcon.classification.r | 104 +-- precintcon-2.2.1/precintcon/R/precintcon.deciles.analysis.r | 72 +- precintcon-2.2.1/precintcon/R/precintcon.fd.r | 206 +++---- precintcon-2.2.1/precintcon/R/precintcon.gamma.r | 108 ++-- precintcon-2.2.1/precintcon/R/precintcon.limits.analysis.r | 58 +- precintcon-2.2.1/precintcon/R/precintcon.ln.a.r | 62 +- precintcon-2.2.1/precintcon/R/precintcon.max.r | 78 +- precintcon-2.2.1/precintcon/R/precintcon.min.r | 80 +-- precintcon-2.2.1/precintcon/R/precintcon.monthly.aggregation.r | 62 +- precintcon-2.2.1/precintcon/R/precintcon.pci.analysis.r | 46 - precintcon-2.2.1/precintcon/R/precintcon.plot.deciles.r | 186 ++---- precintcon-2.2.1/precintcon/R/precintcon.plot.histogram.r | 243 ++++----- precintcon-2.2.1/precintcon/R/precintcon.plot.lorenz.r | 266 +++++----- precintcon-2.2.1/precintcon/R/precintcon.plot.lorenz.ungrouped.r | 132 ++-- precintcon-2.2.1/precintcon/R/precintcon.plot.pci.r | 142 ++--- precintcon-2.2.1/precintcon/R/precintcon.plot.pn.r | 212 +++---- precintcon-2.2.1/precintcon/R/precintcon.plot.rai.r | 216 ++++---- precintcon-2.2.1/precintcon/R/precintcon.plot.spi.r | 186 +++--- precintcon-2.2.1/precintcon/R/precintcon.pn.analysis.r | 34 - precintcon-2.2.1/precintcon/R/precintcon.pn.r | 122 ++-- precintcon-2.2.1/precintcon/R/precintcon.r | 219 ++++---- precintcon-2.2.1/precintcon/R/precintcon.r.squared.r | 44 - precintcon-2.2.1/precintcon/R/precintcon.rai.analysis.r | 82 +-- precintcon-2.2.1/precintcon/R/precintcon.read.data.r | 111 ++-- precintcon-2.2.1/precintcon/R/precintcon.spi.analysis.r | 116 ++-- precintcon-2.2.1/precintcon/R/precintcon.spi.per.year.analysis.r | 44 - precintcon-2.2.1/precintcon/R/precintcon.stat.analysis.r | 150 ++--- precintcon-2.2.1/precintcon/R/rai.r | 69 +- precintcon-2.2.1/precintcon/R/read.data.r | 95 +-- precintcon-2.2.1/precintcon/R/spi.per.year.r | 78 +- precintcon-2.2.1/precintcon/R/spi.r | 74 +- precintcon-2.2.1/precintcon/R/stat.r | 72 +- precintcon-2.2.1/precintcon/R/tii.r |only precintcon-2.2.1/precintcon/R/trend.test.r |only precintcon-2.2.1/precintcon/man/app.Rd |only precintcon-2.2.1/precintcon/man/as.annual.Rd | 92 +-- precintcon-2.2.1/precintcon/man/as.daily.Rd | 218 ++++---- precintcon-2.2.1/precintcon/man/as.decade.Rd | 95 +-- precintcon-2.2.1/precintcon/man/as.deciles.Rd | 106 +-- precintcon-2.2.1/precintcon/man/as.fd.Rd | 118 ++-- precintcon-2.2.1/precintcon/man/as.monthly.Rd | 86 +-- precintcon-2.2.1/precintcon/man/as.seasonal.Rd | 93 +-- precintcon-2.2.1/precintcon/man/ci.Rd | 124 ++-- precintcon-2.2.1/precintcon/man/ci.per.year.Rd | 94 +-- precintcon-2.2.1/precintcon/man/cv.Rd |only precintcon-2.2.1/precintcon/man/daily.Rd | 114 ++-- precintcon-2.2.1/precintcon/man/ff.index.Rd |only precintcon-2.2.1/precintcon/man/limits.Rd | 90 +-- precintcon-2.2.1/precintcon/man/monthly.Rd | 54 +- precintcon-2.2.1/precintcon/man/pci.Rd | 90 +-- precintcon-2.2.1/precintcon/man/pci.seasonal.Rd |only precintcon-2.2.1/precintcon/man/pci.supraseasonal.Rd |only precintcon-2.2.1/precintcon/man/pn.Rd | 108 ++-- precintcon-2.2.1/precintcon/man/pplot.deciles.Rd | 134 ++--- precintcon-2.2.1/precintcon/man/pplot.histogram.Rd | 140 ++--- precintcon-2.2.1/precintcon/man/pplot.lorenz.Rd | 154 ++--- precintcon-2.2.1/precintcon/man/pplot.pci.Rd | 126 ++-- precintcon-2.2.1/precintcon/man/pplot.pn.Rd | 142 ++--- precintcon-2.2.1/precintcon/man/pplot.rai.Rd | 143 ++--- precintcon-2.2.1/precintcon/man/pplot.spi.Rd | 142 ++--- precintcon-2.2.1/precintcon/man/precintcon.Rd | 88 +-- precintcon-2.2.1/precintcon/man/rai.Rd | 99 +-- precintcon-2.2.1/precintcon/man/read.data.Rd | 124 ++-- precintcon-2.2.1/precintcon/man/spi.Rd | 100 +-- precintcon-2.2.1/precintcon/man/spi.per.year.Rd | 104 +-- precintcon-2.2.1/precintcon/man/stat.Rd | 92 +-- precintcon-2.2.1/precintcon/man/tii.Rd |only precintcon-2.2.1/precintcon/man/trend.test.Rd |only 110 files changed, 4959 insertions(+), 4917 deletions(-)
Title: Computerized Adaptive Testing with Multidimensional Item
Response Theory
Description: Provides tools to generate an HTML interface for creating adaptive
and non-adaptive educational and psychological tests using the shiny
package. Suitable for applying unidimensional and multidimensional
computerized adaptive tests using item response theory methodology and for
creating simple questionnaires forms to collect response data directly in R.
Package also contains tools useful for performing Monte Carlo simulations
for studying the behaviour of computerized adaptive test banks.
Author: Phil Chalmers [aut, cre, cph]
Maintainer: Phil Chalmers <rphilip.chalmers@gmail.com>
Diff between mirtCAT versions 0.6.1 dated 2015-11-19 and 0.7 dated 2016-01-21
DESCRIPTION | 13 - MD5 | 50 ++- NAMESPACE | 3 NEWS | 11 R/PersonClass.R | 4 R/ShinyGUIClass.R | 9 R/createShinyGUI.R | 18 + R/getPerson.R |only R/mirtCAT.R | 49 ++- R/mirtCAT_preamble.R | 36 ++ R/run_pattern.R | 6 R/server.R | 27 +- R/updateDesign.R | 3 R/util.R | 29 +- R/zzz-methods.R | 1 man/createShinyGUI.Rd | 23 + man/findNextItem.Rd | 8 man/generate.mirt_object.Rd | 40 +-- man/generate_pattern.Rd | 12 man/getPerson.Rd |only man/mirtCAT-package.Rd | 12 man/mirtCAT.Rd | 468 ++++++++++++++++++------------------- man/mirtCAT_preamble.Rd | 23 + man/updateDesign.Rd | 9 tests/GUI-tests/GUI-tests.R | 24 + tests/tests/test-mirtCAT_ordered.R | 5 tests/tests/test-mirtCAT_uni.R | 5 27 files changed, 519 insertions(+), 369 deletions(-)
Title: Multidimensional Item Response Theory
Description: Analysis of dichotomous and polytomous response data using
unidimensional and multidimensional latent trait models under the Item
Response Theory paradigm. Exploratory and confirmatory models can be
estimated with quadrature (EM) or stochastic (MHRM) methods. Confirmatory
bi-factor and two-tier analyses are available for modeling item testlets.
Multiple group analysis and mixed effects designs also are available for
detecting differential item and test functioning as well as modelling
item and person covariates.
Author: Phil Chalmers [aut, cre, cph],
Joshua Pritikin [ctb],
Alexander Robitzsch [ctb],
Mateusz Zoltak [ctb],
KwonHyun Kim [ctb],
Carl F. Falk [ctb]
Maintainer: Phil Chalmers <rphilip.chalmers@gmail.com>
Diff between mirt versions 1.14 dated 2015-11-19 and 1.15 dated 2016-01-21
DESCRIPTION | 20 +-- MD5 | 148 ++++++++++++----------- NAMESPACE | 2 NEWS | 23 +++ R/02-item_methods.R | 254 +++++++++++++++++++++++++++++++++++++++- R/03-estimation.R | 42 +++++- R/DIF.R | 1 R/M2.R | 3 R/MDIFF.R | 18 ++ R/MDISC.R | 7 - R/MHRM.group.R | 31 ++-- R/Mixed-methods.R | 3 R/PLCI.mirt.R | 2 R/PrepData.R | 88 ++++++++----- R/SE.methods.R | 15 +- R/SIBTEST.R |only R/SingleGroup-methods.R | 2 R/averageMI.R | 2 R/boot.mirt.R | 2 R/createItem.R | 1 R/empirical_plot.R |only R/empirical_rxx.R | 2 R/expand.table.R | 37 +++-- R/expected.item.R | 6 R/expected.test.R | 14 +- R/extract.group.R | 15 +- R/extract.item.R | 6 R/extract.mirt.R | 135 +++++++++++++-------- R/fixef.R | 6 R/fscores.R | 1 R/imputeMissing.R | 30 ++-- R/itemGAM.R | 2 R/itemfit.R | 13 +- R/iteminfo.R | 3 R/itemplot.R | 1 R/key2binary.R | 1 R/marginal_rxx.R | 4 R/mdirt.R | 1 R/mirt.R | 23 +++ R/mirtCluster.R | 1 R/mod2values.R | 2 R/multipleGroup.R | 4 R/personfit.R | 1 R/probtrace.R | 4 R/randef.R | 9 - R/simdata.R | 12 + R/testinfo.R | 4 R/utils.R | 7 - R/wald.R | 10 - man/MDIFF.Rd | 8 - man/MDISC.Rd | 2 man/PLCI.mirt.Rd | 3 man/SIBTEST.Rd |only man/averageMI.Rd | 3 man/boot.mirt.Rd | 3 man/empirical_plot.Rd |only man/empirical_rxx.Rd | 3 man/expand.table.Rd | 17 +- man/expected.item.Rd | 7 - man/extract.group.Rd | 3 man/extract.mirt.Rd | 36 ++++- man/itemGAM.Rd | 3 man/iteminfo.Rd | 5 man/marginal_rxx.Rd | 3 man/mdirt.Rd | 3 man/mirt.Rd | 23 +++ man/mod2values.Rd | 3 man/multipleGroup.Rd | 2 man/probtrace.Rd | 5 man/simdata.Rd | 10 - man/testinfo.Rd | 3 man/wald.Rd | 3 src/dpars.cpp | 241 +++++++++++++++---------------------- tests/tests/test-01-mirtOne.R | 3 tests/tests/test-02-mirtTwo.R | 4 tests/tests/test-07-mixedmirt.R | 14 +- tests/tests/test-12-gpcm_mats.R |only tests/tests/test-13-grsmIRT.R |only 78 files changed, 974 insertions(+), 454 deletions(-)
Title: Geometric Morphometric Analyses of 2D/3D Landmark Data
Description: Read, manipulate, and digitize landmark data, generate shape
variables via Procrustes analysis for points, curves and surfaces, perform
shape analyses, and provide graphical depictions of shapes and patterns of
shape variation.
Author: Dean Adams, Michael Collyer, Emma Sherratt
Maintainer: Dean Adams <dcadams@iastate.edu>
Diff between geomorph versions 2.1.7-1 dated 2015-10-27 and 3.0.0 dated 2016-01-21
geomorph-2.1.7-1/geomorph/R/compare.modular.partitions.r |only geomorph-2.1.7-1/geomorph/R/morphol.integr.r |only geomorph-2.1.7-1/geomorph/R/phylo.pls.R |only geomorph-2.1.7-1/geomorph/R/plotAllometry.r |only geomorph-2.1.7-1/geomorph/R/trajectory.analysis.r |only geomorph-2.1.7-1/geomorph/src |only geomorph-3.0.0/geomorph/DESCRIPTION | 11 geomorph-3.0.0/geomorph/MD5 | 245 - geomorph-3.0.0/geomorph/NAMESPACE | 47 geomorph-3.0.0/geomorph/NEWS | 37 geomorph-3.0.0/geomorph/R/advanced.procD.lm.r | 364 + geomorph-3.0.0/geomorph/R/arrayspecs.r | 8 geomorph-3.0.0/geomorph/R/bilat.symmetry.r | 397 +- geomorph-3.0.0/geomorph/R/compare.evol.rates.r | 172 geomorph-3.0.0/geomorph/R/compare.multi.evol.rates.r | 129 geomorph-3.0.0/geomorph/R/define.links.r | 2 geomorph-3.0.0/geomorph/R/define.modules.r | 8 geomorph-3.0.0/geomorph/R/define.sliders.r | 2 geomorph-3.0.0/geomorph/R/deprecated.defunct.r |only geomorph-3.0.0/geomorph/R/digit.curves.r | 4 geomorph-3.0.0/geomorph/R/digit.fixed.r | 2 geomorph-3.0.0/geomorph/R/digitize2d.r | 22 geomorph-3.0.0/geomorph/R/digitsurface.r | 8 geomorph-3.0.0/geomorph/R/estimate.missing.r | 20 geomorph-3.0.0/geomorph/R/geomorph.data.frame.r |only geomorph-3.0.0/geomorph/R/geomorph.support.code.r | 2470 +++++++++---- geomorph-3.0.0/geomorph/R/geomorph.utils.R |only geomorph-3.0.0/geomorph/R/globalIntegration.r | 3 geomorph-3.0.0/geomorph/R/gpagen.r | 171 geomorph-3.0.0/geomorph/R/gridPar.R | 1 geomorph-3.0.0/geomorph/R/integration.test.R |only geomorph-3.0.0/geomorph/R/modularity.test.R |only geomorph-3.0.0/geomorph/R/morphol.disparity.r | 140 geomorph-3.0.0/geomorph/R/nested.update.R |only geomorph-3.0.0/geomorph/R/phylo.integration.R |only geomorph-3.0.0/geomorph/R/phylo.modularity.R |only geomorph-3.0.0/geomorph/R/physignal.r | 158 geomorph-3.0.0/geomorph/R/plotAllSpecimens.r | 43 geomorph-3.0.0/geomorph/R/plotGMPhyloMorphoSpace.r | 4 geomorph-3.0.0/geomorph/R/plotRefToTarget.r | 17 geomorph-3.0.0/geomorph/R/plotspec.r | 10 geomorph-3.0.0/geomorph/R/procD.allometry.R |only geomorph-3.0.0/geomorph/R/procD.lm.r | 133 geomorph-3.0.0/geomorph/R/procD.pgls.r | 148 geomorph-3.0.0/geomorph/R/readland.nts.r | 8 geomorph-3.0.0/geomorph/R/readland.tps.r | 2 geomorph-3.0.0/geomorph/R/trajectory.analysis.R |only geomorph-3.0.0/geomorph/R/two.b.pls.r | 236 - geomorph-3.0.0/geomorph/R/warpRefMesh.r | 8 geomorph-3.0.0/geomorph/R/warpRefOutline.r | 6 geomorph-3.0.0/geomorph/data/larvalTails.rda |only geomorph-3.0.0/geomorph/man/advanced.procD.lm.Rd | 123 geomorph-3.0.0/geomorph/man/arrayspecs.Rd | 18 geomorph-3.0.0/geomorph/man/bilat.symmetry.Rd | 118 geomorph-3.0.0/geomorph/man/buildtemplate.Rd | 34 geomorph-3.0.0/geomorph/man/compare.evol.rates.Rd | 75 geomorph-3.0.0/geomorph/man/compare.modular.partitions.Rd | 64 geomorph-3.0.0/geomorph/man/compare.multi.evol.rates.Rd | 86 geomorph-3.0.0/geomorph/man/define.links.Rd | 14 geomorph-3.0.0/geomorph/man/define.modules.Rd | 30 geomorph-3.0.0/geomorph/man/define.sliders.Rd | 40 geomorph-3.0.0/geomorph/man/digit.curves.Rd | 6 geomorph-3.0.0/geomorph/man/digit.fixed.Rd | 20 geomorph-3.0.0/geomorph/man/digitize2d.Rd | 48 geomorph-3.0.0/geomorph/man/digitsurface.Rd | 26 geomorph-3.0.0/geomorph/man/editTemplate.Rd | 10 geomorph-3.0.0/geomorph/man/estimate.missing.Rd | 40 geomorph-3.0.0/geomorph/man/findMeanSpec.Rd | 10 geomorph-3.0.0/geomorph/man/fixed.angle.Rd | 8 geomorph-3.0.0/geomorph/man/geomorph-package.Rd | 14 geomorph-3.0.0/geomorph/man/geomorph.data.frame.Rd |only geomorph-3.0.0/geomorph/man/globalIntegration.Rd | 19 geomorph-3.0.0/geomorph/man/gpagen.Rd | 159 geomorph-3.0.0/geomorph/man/gridPar.Rd | 17 geomorph-3.0.0/geomorph/man/hummingbirds.Rd | 6 geomorph-3.0.0/geomorph/man/integration.test.Rd |only geomorph-3.0.0/geomorph/man/larvalTails.Rd |only geomorph-3.0.0/geomorph/man/modularity.test.Rd |only geomorph-3.0.0/geomorph/man/morphol.disparity.Rd | 82 geomorph-3.0.0/geomorph/man/morphol.integr.Rd | 91 geomorph-3.0.0/geomorph/man/mosquito.Rd | 6 geomorph-3.0.0/geomorph/man/motionpaths.Rd | 4 geomorph-3.0.0/geomorph/man/mshape.Rd | 10 geomorph-3.0.0/geomorph/man/nested.update.Rd |only geomorph-3.0.0/geomorph/man/phylo.integration.Rd |only geomorph-3.0.0/geomorph/man/phylo.modularity.Rd |only geomorph-3.0.0/geomorph/man/phylo.pls.Rd | 64 geomorph-3.0.0/geomorph/man/physignal.Rd | 79 geomorph-3.0.0/geomorph/man/plethShapeFood.Rd | 8 geomorph-3.0.0/geomorph/man/plethodon.Rd | 6 geomorph-3.0.0/geomorph/man/plethspecies.Rd | 2 geomorph-3.0.0/geomorph/man/plot.CR.Rd |only geomorph-3.0.0/geomorph/man/plot.CR.phylo.Rd |only geomorph-3.0.0/geomorph/man/plot.advanced.procD.lm.Rd |only geomorph-3.0.0/geomorph/man/plot.bilat.symmetry.Rd |only geomorph-3.0.0/geomorph/man/plot.evolrate.Rd |only geomorph-3.0.0/geomorph/man/plot.gpagen.Rd |only geomorph-3.0.0/geomorph/man/plot.physignal.Rd |only geomorph-3.0.0/geomorph/man/plot.pls.Rd |only geomorph-3.0.0/geomorph/man/plot.procD.allometry.Rd |only geomorph-3.0.0/geomorph/man/plot.procD.lm.Rd |only geomorph-3.0.0/geomorph/man/plot.trajectory.analysis.Rd |only geomorph-3.0.0/geomorph/man/plotAllSpecimens.Rd | 24 geomorph-3.0.0/geomorph/man/plotAllometry.Rd | 104 geomorph-3.0.0/geomorph/man/plotGMPhyloMorphoSpace.Rd | 28 geomorph-3.0.0/geomorph/man/plotOutliers.Rd | 7 geomorph-3.0.0/geomorph/man/plotRefToTarget.Rd | 58 geomorph-3.0.0/geomorph/man/plotTangentSpace.Rd | 32 geomorph-3.0.0/geomorph/man/plotspec.Rd | 16 geomorph-3.0.0/geomorph/man/print.CR.Rd |only geomorph-3.0.0/geomorph/man/print.CR.phylo.Rd |only geomorph-3.0.0/geomorph/man/print.advanced.procD.lm.Rd |only geomorph-3.0.0/geomorph/man/print.bilat.symmetry.Rd |only geomorph-3.0.0/geomorph/man/print.evolrate.Rd |only geomorph-3.0.0/geomorph/man/print.evolrate1.Rd |only geomorph-3.0.0/geomorph/man/print.gpagen.Rd |only geomorph-3.0.0/geomorph/man/print.morphol.disparity.Rd |only geomorph-3.0.0/geomorph/man/print.physignal.Rd |only geomorph-3.0.0/geomorph/man/print.pls.Rd |only geomorph-3.0.0/geomorph/man/print.procD.allometry.Rd |only geomorph-3.0.0/geomorph/man/print.procD.lm.Rd |only geomorph-3.0.0/geomorph/man/print.trajectory.analysis.Rd |only geomorph-3.0.0/geomorph/man/procD.allometry.Rd |only geomorph-3.0.0/geomorph/man/procD.lm.Rd | 131 geomorph-3.0.0/geomorph/man/procD.pgls.Rd | 107 geomorph-3.0.0/geomorph/man/pupfish.Rd | 13 geomorph-3.0.0/geomorph/man/ratland.Rd | 4 geomorph-3.0.0/geomorph/man/read.morphologika.Rd | 14 geomorph-3.0.0/geomorph/man/read.ply.Rd | 8 geomorph-3.0.0/geomorph/man/readland.nts.Rd | 36 geomorph-3.0.0/geomorph/man/readland.tps.Rd | 30 geomorph-3.0.0/geomorph/man/readmulti.nts.Rd | 24 geomorph-3.0.0/geomorph/man/scallopPLY.Rd | 2 geomorph-3.0.0/geomorph/man/scallops.Rd | 2 geomorph-3.0.0/geomorph/man/summary.CR.Rd |only geomorph-3.0.0/geomorph/man/summary.CR.phylo.Rd |only geomorph-3.0.0/geomorph/man/summary.advanced.procD.lm.Rd |only geomorph-3.0.0/geomorph/man/summary.bilat.symmetry.Rd |only geomorph-3.0.0/geomorph/man/summary.evolrate.Rd |only geomorph-3.0.0/geomorph/man/summary.evolrate1.Rd |only geomorph-3.0.0/geomorph/man/summary.gpagen.Rd |only geomorph-3.0.0/geomorph/man/summary.morphol.disparity.Rd |only geomorph-3.0.0/geomorph/man/summary.physignal.Rd |only geomorph-3.0.0/geomorph/man/summary.pls.Rd |only geomorph-3.0.0/geomorph/man/summary.procD.allometry.Rd |only geomorph-3.0.0/geomorph/man/summary.procD.lm.Rd |only geomorph-3.0.0/geomorph/man/summary.trajectory.analysis.Rd |only geomorph-3.0.0/geomorph/man/trajectory.analysis.Rd | 239 - geomorph-3.0.0/geomorph/man/two.b.pls.Rd | 89 geomorph-3.0.0/geomorph/man/two.d.array.Rd | 12 geomorph-3.0.0/geomorph/man/warpRefMesh.Rd | 24 geomorph-3.0.0/geomorph/man/warpRefOutline.Rd | 18 geomorph-3.0.0/geomorph/man/writeland.tps.Rd | 4 153 files changed, 4387 insertions(+), 3012 deletions(-)
Title: Item Focused Trees for the Identification of Items in
Differential Item Functioning
Description: Item focused recursive partitioning for simultaneous selection of
items and variables that induce Differential Item Functioning (DIF) based on the
Rasch Model or the Logistic Regression Approach for DIF detection.
Author: Moritz Berger
Maintainer: Moritz Berger <moritz.berger@stat.uni-muenchen.de>
Diff between DIFtree versions 1.1.0 dated 2015-10-14 and 2.0.1 dated 2016-01-21
DESCRIPTION | 12 MD5 | 38 ++ NAMESPACE | 20 + R/DIFtree-internal.R | 251 +++++++++---------- R/DIFtree.R | 601 ++++++++--------------------------------------- R/DIFtree.default.R |only R/data_sim.R | 9 R/designlists_logistic.R |only R/get_endnodes.R |only R/info_summary.R |only R/infos_summary.R |only R/one_prediction.R |only R/plot.DIFtree.R | 228 ++++++++--------- R/predict.DIFtree.R | 165 +++++++----- R/prepareX.R |only R/ptree.R |only R/summary.DIFtree.R |only R/tree_Logistic.R |only R/tree_Rasch.R |only R/tree_dif.R |only R/tree_nudif.R |only R/tree_udif.R |only R/whole_prediction.R |only man/DIFtree.Rd | 88 ++++-- man/data_sim.Rd | 20 + man/plot.DIFtree.Rd | 48 ++- man/predict.DIFtree.Rd | 43 ++- man/summary.DIFtree.Rd |only 28 files changed, 634 insertions(+), 889 deletions(-)
Title: Wrapper for MUMPS Library
Description: Exported class can be used for storing sparse matrix
and solving corresponding linear system with one or many right
hand sides. There is a possibility to do separately symbolic analysis,
LU factorization and system solving.
Author: Serguei Sokol
Maintainer: Serguei Sokol <sokol@insa-toulouse.fr>
Diff between rmumps versions 5.0.1.4 dated 2015-12-17 and 5.0.1.6 dated 2016-01-21
rmumps-5.0.1.4/rmumps/build |only rmumps-5.0.1.4/rmumps/configure |only rmumps-5.0.1.4/rmumps/inst/MUMPS_5.0.1 |only rmumps-5.0.1.4/rmumps/inst/Makefile |only rmumps-5.0.1.4/rmumps/inst/Makefile.mumps |only rmumps-5.0.1.4/rmumps/inst/Makefile.win |only rmumps-5.0.1.4/rmumps/inst/compiler_options.in |only rmumps-5.0.1.4/rmumps/inst/compiler_options.in.win |only rmumps-5.0.1.4/rmumps/inst/metis-5.1.0 |only rmumps-5.0.1.6/rmumps/DESCRIPTION | 11 rmumps-5.0.1.6/rmumps/MD5 | 865 +++++++++----------- rmumps-5.0.1.6/rmumps/NEWS | 16 rmumps-5.0.1.6/rmumps/cleanup | 6 rmumps-5.0.1.6/rmumps/configure.win | 16 rmumps-5.0.1.6/rmumps/inst/examples/random_matrix.R | 2 rmumps-5.0.1.6/rmumps/man/Rmumps.Rd | 10 rmumps-5.0.1.6/rmumps/man/rmumps-package.Rd | 4 rmumps-5.0.1.6/rmumps/src/Makevars | 13 rmumps-5.0.1.6/rmumps/src/Makevars.win | 7 rmumps-5.0.1.6/rmumps/src/lib |only rmumps-5.0.1.6/rmumps/src/rmumps_module.cpp | 8 21 files changed, 470 insertions(+), 488 deletions(-)
Title: Provides the Standard Distribution Functions for the Triangle
Distribution
Description: Provides the "r, q, p, and d" distribution functions for the triangle distribution.
Author: Rob Carnell
Maintainer: Rob Carnell <bertcarnell@gmail.com>
Diff between triangle versions 0.8 dated 2013-02-22 and 0.10 dated 2016-01-21
ChangeLog | 9 +++++++++ DESCRIPTION | 22 +++++++++------------- MD5 | 9 +++++---- NAMESPACE | 2 ++ man/triangle-package.Rd |only man/triangle.Rd | 4 ++-- 6 files changed, 27 insertions(+), 19 deletions(-)
Title: Classification and Regression Trees
Description: Classification and regression trees.
Author: Brian Ripley [aut, cre]
Maintainer: Brian Ripley <ripley@stats.ox.ac.uk>
Diff between tree versions 1.0-36 dated 2015-06-29 and 1.0-37 dated 2016-01-21
ChangeLog | 4 ++++ DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- src/grow.c | 2 ++ src/treefix.c | 1 + 5 files changed, 15 insertions(+), 8 deletions(-)
Title: Supplementary Distributions
Description: Ten distributions supplementing those built into R.
Inverse Gauss, Kruskal-Wallis, Kendall's Tau, Friedman's chi
squared, Spearman's rho, maximum F ratio, the Pearson product
moment correlation coefficiant, Johnson distributions, normal
scores and generalized hypergeometric distributions. In
addition two random number generators of George Marsaglia are
included.
Author: Bob Wheeler <bwheelerg@gmail.com>
Maintainer: ORPHANED
Diff between SuppDists versions 1.1-9.1 dated 2013-10-30 and 1.1-9.2 dated 2016-01-21
DESCRIPTION | 10 +++++----- MD5 | 6 +++--- NAMESPACE | 2 ++ src/dists.cc | 19 +++++++++++++------ 4 files changed, 23 insertions(+), 14 deletions(-)
Title: Programming with Big Data -- Interface to ZeroMQ
Description: 'ZeroMQ' is a well-known library for high-performance
asynchronous messaging in scalable, distributed applications. This
package provides high level R wrapper functions to easily utilize
'ZeroMQ'. We mainly focus on interactive client/server programming
frameworks. For convenience, a minimal 'ZeroMQ' library (4.1.0 rc1)
is shipped with 'pbdZMQ', which can be used if no system installation
of 'ZeroMQ' is available. A few wrapper functions compatible with
'rzmq' are also provided.
Author: Wei-Chen Chen [aut, cre],
Drew Schmidt [aut],
Christian Heckendorf [aut] (file transfer),
George Ostrouchov [aut] (Mac OSX),
Whit Armstrong [ctb] (some functions are modified from the rzmq package
for backwards compatibility),
Brian Ripley [ctb] (C code of shellexec, and Solaris),
R Core team [ctb] (some functions are modified from the R source code)
Maintainer: Wei-Chen Chen <wccsnow@gmail.com>
Diff between pbdZMQ versions 0.2-0 dated 2015-12-16 and 0.2-1 dated 2016-01-21
ChangeLog | 7 +++ DESCRIPTION | 9 ++-- MD5 | 64 +++++++++++++++++------------- NAMESPACE | 11 ++++- R/111_control.r | 21 +++++++++ R/111_pbd_opt.r |only R/222_export_env.r | 4 - R/222_export_opt.r | 61 +++++++++------------------- R/R_zmq_message.r | 6 +- R/R_zmq_poll.r |only R/R_zmq_sendrecv.r | 6 +- R/R_zmq_sendrecv_multipart.r |only R/R_zmq_socket.r | 34 +++++++++++++++ README.md | 1 demo/00Index | 3 + demo/mpclient.r |only demo/mpserver.r |only demo/mspoller.r |only demo/taskvent.r | 3 - demo/wuserver.r | 1 inst/CITATION | 8 ++- inst/doc/pbdZMQ-guide.pdf |binary man/a0_b_control.Rd | 1 man/a0_b_pbd_opt.Rd |only man/a0_c_options.Rd | 32 ++------------- man/a1_socket.Rd | 11 ++++- man/b0_sendrecv.Rd | 2 man/b2_sendrecv_multipart.Rd |only man/b3_poll.Rd |only man/zz_zmq_control.Rd | 5 ++ src/Makevars.in | 2 src/R_zmq.h | 8 +++ src/R_zmq_poll.c |only src/R_zmq_sendrecv.c | 2 src/R_zmq_socket.c | 39 +++++++++++++++++- src/zzz.c | 7 +++ vignettes/pbdZMQ-include/01-copyright.tex | 2 vignettes/pbdZMQ-include/03-example.tex | 10 ++++ 38 files changed, 240 insertions(+), 120 deletions(-)
Title: Programming with Big Data -- Interface to MPI
Description: An efficient interface to MPI by utilizing S4
classes and methods with a focus on Single Program/Multiple Data ('SPMD')
parallel programming style, which is intended for batch parallel
execution.
Author: Wei-Chen Chen [aut, cre],
George Ostrouchov [aut],
Drew Schmidt [aut],
Pragneshkumar Patel [aut],
Hao Yu [aut],
Christian Heckendorf [ctb] (FreeBSD),
Brian Ripley [ctb] (Windows HPC Pack 2012),
R Core team [ctb] (some functions are modified from the base packages)
Maintainer: Wei-Chen Chen <wccsnow@gmail.com>
Diff between pbdMPI versions 0.3-0 dated 2015-12-18 and 0.3-1 dated 2016-01-21
ChangeLog | 6 +++++ DESCRIPTION | 10 ++++----- MD5 | 18 +++++++++-------- NAMESPACE | 5 +++- R/111_pbd_opt.r |only R/222_export_env.r | 31 ++++++++++++++---------------- inst/doc/pbdMPI-guide.pdf |binary man/11_d_pbd_opt.Rd |only man/ww_comm_as_gbd.Rd | 2 - man/zz_spmd_control.Rd | 2 - vignettes/pbdMPI-include/01-copyright.tex | 2 - 11 files changed, 42 insertions(+), 34 deletions(-)
Title: Client for the Captricity API
Description: Get text from images of text using Captricity Optical Character
Recognition (OCR) API. Captricity allows you to get text from handwritten
forms --- think surveys --- and other structured paper documents. And it can
output data in form a delimited file keeping field information intact. For more
information, read https://shreddr.captricity.com/developer/overview/.
Author: Gaurav Sood [aut, cre]
Maintainer: Gaurav Sood <gsood07@gmail.com>
Diff between captr versions 0.1.3 dated 2015-12-14 and 0.1.4 dated 2016-01-21
DESCRIPTION | 6 +++--- MD5 | 23 ++++++++++++++++------- NAMESPACE | 4 ++++ NEWS | 6 ++++++ R/create_batch.R | 13 ++++++++----- R/list_batch_files.R |only R/list_batches.R |only R/list_docs.R |only R/list_jobs.R |only R/user_profile.R |only build/vignette.rds |binary inst/doc/using_captr.html | 4 ++-- man/create_batch.Rd | 7 +++++-- man/list_batch_files.Rd |only man/list_batches.Rd |only man/list_docs.Rd |only man/list_jobs.Rd |only 17 files changed, 44 insertions(+), 19 deletions(-)