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Title: Send Messages, Images, R Objects and Files to 'Slack'
Channels/Users
Description: 'Slack' <http://slack.com/> provides a service for teams to
collaborate by sharing messages, images, links, files and more. Functions are provided
that make it possible to interact with the 'Slack' platform 'API'. When
you need to share information or data from R, rather than resort to copy/
paste in e-mails or other services like 'Skype' <http://www.skype.com/>, you
can use this package to send well-formatted output from multiple R objects and
expressions to all teammates at the same time with little effort. You can also
send images from the current graphics device, R objects, and upload files.
Author: Bob Rudis [aut, cre], Jay Jacobs [ctb], David Severski [ctb],
Quinn Weber [ctb], Konrad Karczewski [ctb], Shinya Uryu [ctb],
Gregory Jefferis [ctb], Ed Niles [ctb], Rick Saporta [ctb]
Maintainer: Bob Rudis <bob@rudis.net>
Diff between slackr versions 1.4.1 dated 2016-04-27 and 1.4.2 dated 2016-07-20
DESCRIPTION | 9 ++-- MD5 | 17 ++++---- NEWS.md |only R/dev_slackr.R | 8 ++-- R/save_slackr.R | 14 +++---- R/slackr_bot.r | 106 +++++++++++++++++++++++++++++++++++------------------- R/slackr_upload.R | 10 ++--- R/slackr_utils.R | 24 +++++------- README.md | 5 ++ man/dev_slackr.Rd | 2 - 10 files changed, 115 insertions(+), 80 deletions(-)
Title: Client for Various 'CrossRef' 'APIs'
Description: Client for various 'CrossRef' 'APIs', including 'metadata' search
with their old and newer search 'APIs', get 'citations' in various formats
(including 'bibtex', 'citeproc-json', 'rdf-xml', etc.), convert 'DOIs'
to 'PMIDs', and 'vice versa', get citations for 'DOIs', and get links to
full text of articles when available.
Author: Scott Chamberlain [aut, cre],
Carl Boettiger [aut],
Ted Hart [aut],
Karthik Ram [aut]
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>
Diff between rcrossref versions 0.5.2 dated 2016-02-10 and 0.5.4 dated 2016-07-20
DESCRIPTION | 12 ++--- MD5 | 52 +++++++++++----------- NAMESPACE | 1 NEWS.md | 9 +++ R/cr_citation_count.r | 21 ++++----- R/cr_ft_text.R | 12 ++++- R/cr_fundref.r | 88 +++++++++++++++++++------------------- R/cr_journals.r | 19 ++++---- R/cr_licenses.R | 2 R/cr_members.r | 76 ++++++++++++++++---------------- R/cr_prefixes.r | 68 ++++++++++++++--------------- R/cr_r.r | 8 +-- R/cr_types.R | 66 ++++++++++++++-------------- R/cr_works.R | 78 ++++++++++++++++----------------- R/rcrossref-package.R | 46 +++++++++---------- README.md | 2 build/vignette.rds |binary man/cr_citation_count.Rd | 18 ++++--- man/cr_fundref.Rd | 14 +++--- man/cr_members.Rd | 6 +- man/cr_prefixes.Rd | 22 ++++----- man/cr_types.Rd | 8 +-- man/cr_works.Rd | 8 +-- man/rcrossref-package.Rd | 32 ++++++------- tests/testthat/test_cr_cn.R | 4 - tests/testthat/test_cr_journals.R | 2 tests/testthat/test_cr_works.R | 2 27 files changed, 349 insertions(+), 327 deletions(-)
Title: Modeling Animal Movement with Continuous-Time Discrete-Space
Markov Chains
Description: Software to facilitates taking movement data in xyt format and pairing it with raster covariates within a continuous time Markov chain (CTMC) framework. As described in Hanks et al. (2015) <DOI:10.1214/14-AOAS803> , this allows flexible modeling of movement in response to covariates (or covariate gradients) with model fitting possible within a Poisson GLM framework.
Author: Ephraim Hanks
Maintainer: Ephraim Hanks <hanks@psu.edu>
Diff between ctmcmove versions 1.2.4 dated 2016-06-14 and 1.2.5 dated 2016-07-20
ctmcmove-1.2.4/ctmcmove/R/mcmc.fmove.r |only ctmcmove-1.2.5/ctmcmove/DESCRIPTION | 10 +++++----- ctmcmove-1.2.5/ctmcmove/MD5 | 14 +++++++++----- ctmcmove-1.2.5/ctmcmove/R/Pctmc.R | 2 +- ctmcmove-1.2.5/ctmcmove/R/ctmc2glm.R | 7 +++++-- ctmcmove-1.2.5/ctmcmove/R/get.UD.R |only ctmcmove-1.2.5/ctmcmove/R/get.rate.matrix.R |only ctmcmove-1.2.5/ctmcmove/R/mcmc.fmove.R |only ctmcmove-1.2.5/ctmcmove/man/ctmc2glm.Rd | 6 +++++- ctmcmove-1.2.5/ctmcmove/man/get.UD.Rd |only ctmcmove-1.2.5/ctmcmove/man/get.rate.matrix.Rd |only 11 files changed, 25 insertions(+), 14 deletions(-)
Title: Thermal Image Analysis
Description: A collection of functions and routines for inputting thermal
image video files, plotting and converting binary raw data into estimates of
temperature. First published 2015-03-26. Written primarily for research purposes
in biological applications of thermal images. v1 included the base calculations
for converting thermal image binary values to temperatures. v2 included additional
equations for providing heat transfer calculations and an import function for thermal
image files.
Author: Glenn J. Tattersall
Maintainer: Glenn J. Tattersall <gtatters@brocku.ca>
Diff between Thermimage versions 2.1.1 dated 2016-06-24 and 2.2.0 dated 2016-07-20
DESCRIPTION | 22 +++++++++++++--------- MD5 | 9 +++++++-- R/flirsettings.R |only R/readflirJPG.R |only inst |only man/flirsettings.Rd |only man/raw2temp.Rd | 2 +- man/readflirJPG.Rd |only 8 files changed, 21 insertions(+), 12 deletions(-)
Title: 'Shiny' Applications for the R Package 'Luminescence'
Description: A collection of 'shiny' applications for the R package
'Luminescence'. These mainly, but not exclusively, include applications for
plotting chronometric data from e.g. luminescence or radiocarbon dating. It
further provides access to bootstraps tooltip and popover functionality and
contains the 'jscolor.js' library with a custom 'shiny' output binding.
Author: Christoph Burow [aut, cre],
R Luminescence Package Team [ctb],
Jan Odvarko [cph] (jscolor.js in www/jscolor),
AnalytixWare [cph] (ShinySky package)
Maintainer: Christoph Burow <christoph.burow@uni-koeln.de>
Diff between RLumShiny versions 0.1.0 dated 2015-03-31 and 0.1.1 dated 2016-07-20
DESCRIPTION | 32 +- LICENSE.note | 2 MD5 | 56 ++-- NAMESPACE | 4 NEWS | 26 + R/RLumShiny.R | 2 R/app_RLum.R | 6 R/zzz.R | 2 inst/shiny/KDE/server.R | 179 ++++--------- inst/shiny/KDE/ui.R | 144 +++------- inst/shiny/abanico/server.R | 520 ++++++--------------------------------- inst/shiny/abanico/ui.R | 334 ++++++++++++++----------- inst/shiny/cosmicdose/server.R | 32 +- inst/shiny/cosmicdose/ui.R | 18 - inst/shiny/doserecovery/server.R | 59 ++++ inst/shiny/doserecovery/ui.R | 14 - inst/shiny/histogram/server.R | 130 +++------ inst/shiny/histogram/ui.R | 72 +++-- inst/shiny/radialplot/server.R | 271 +++++--------------- inst/shiny/radialplot/ui.R | 15 - inst/shiny/transformCW |only man/RLumShiny-package.Rd | 12 man/app_RLum.Rd | 15 - man/jscolorInput.Rd | 14 - man/popover.Rd | 6 man/tooltip.Rd | 18 - 26 files changed, 744 insertions(+), 1239 deletions(-)
Title: Easy to Use Tools for Common Forms of Random Assignment
Description: Generates random assignments for common experimental
designs: simple, complete, blocked, and clustered.
Author: Alexander Coppock [aut, cre]
Maintainer: Alexander Coppock <acoppock@gmail.com>
Diff between randomizr versions 0.3.0 dated 2015-11-23 and 0.4.0 dated 2016-07-20
randomizr-0.3.0/randomizr/R/ra_probabilities.R |only randomizr-0.3.0/randomizr/tests/testthat/test-assignment-functions.R |only randomizr-0.4.0/randomizr/DESCRIPTION | 10 randomizr-0.4.0/randomizr/MD5 | 70 - randomizr-0.4.0/randomizr/NAMESPACE | 1 randomizr-0.4.0/randomizr/R/block_and_cluster_ra.R | 132 +- randomizr-0.4.0/randomizr/R/block_and_cluster_ra_probabilities.R |only randomizr-0.4.0/randomizr/R/block_ra.R | 288 ++++-- randomizr-0.4.0/randomizr/R/block_ra_probabilities.R |only randomizr-0.4.0/randomizr/R/cluster_ra.R | 88 + randomizr-0.4.0/randomizr/R/cluster_ra_probabilities.R |only randomizr-0.4.0/randomizr/R/complete_ra.R | 291 +++--- randomizr-0.4.0/randomizr/R/complete_ra_probabilities.R |only randomizr-0.4.0/randomizr/R/declare_ra.R | 466 ++++++---- randomizr-0.4.0/randomizr/R/helper_functions.R |only randomizr-0.4.0/randomizr/R/simple_ra.R | 118 +- randomizr-0.4.0/randomizr/R/simple_ra_probabilities.R |only randomizr-0.4.0/randomizr/build/vignette.rds |binary randomizr-0.4.0/randomizr/inst/doc/randomizr_vignette.R | 66 - randomizr-0.4.0/randomizr/inst/doc/randomizr_vignette.Rmd | 79 - randomizr-0.4.0/randomizr/inst/doc/randomizr_vignette.html | 435 ++++----- randomizr-0.4.0/randomizr/man/block_and_cluster_ra.Rd | 61 - randomizr-0.4.0/randomizr/man/block_and_cluster_ra_probabilities.Rd | 50 - randomizr-0.4.0/randomizr/man/block_ra.Rd | 76 + randomizr-0.4.0/randomizr/man/block_ra_probabilities.Rd | 39 randomizr-0.4.0/randomizr/man/cluster_ra.Rd | 37 randomizr-0.4.0/randomizr/man/cluster_ra_probabilities.Rd | 27 randomizr-0.4.0/randomizr/man/complete_ra.Rd | 60 - randomizr-0.4.0/randomizr/man/complete_ra_probabilities.Rd | 24 randomizr-0.4.0/randomizr/man/declare_ra.Rd | 65 - randomizr-0.4.0/randomizr/man/obtain_condition_probabilities.Rd | 6 randomizr-0.4.0/randomizr/man/simple_ra.Rd | 22 randomizr-0.4.0/randomizr/man/simple_ra_probabilities.Rd | 18 randomizr-0.4.0/randomizr/tests/testthat/test-assignment_probabilities.R | 89 + randomizr-0.4.0/randomizr/tests/testthat/test-block_and_cluster_ra.R |only randomizr-0.4.0/randomizr/tests/testthat/test-block_ra.R |only randomizr-0.4.0/randomizr/tests/testthat/test-cleaner-function.R |only randomizr-0.4.0/randomizr/tests/testthat/test-cluster_ra.R |only randomizr-0.4.0/randomizr/tests/testthat/test-complete_ra.R |only randomizr-0.4.0/randomizr/tests/testthat/test-empirical-probabilities.R |only randomizr-0.4.0/randomizr/tests/testthat/test-simple_ra.R |only randomizr-0.4.0/randomizr/tests/testthat/test-tricky-examples.R |only randomizr-0.4.0/randomizr/tests/testthat/test_design_declarations.R | 39 randomizr-0.4.0/randomizr/vignettes/randomizr_vignette.Rmd | 79 - 44 files changed, 1661 insertions(+), 1075 deletions(-)
Title: Multi-Level Vector Autoregression
Description: Estimates the multi-level vector autoregression model on time-series data.
Three network structures are obtained: temporal networks, contemporaneous
networks and between-subjects networks.
Author: Sacha Epskamp, Marie K. Deserno and Laura F. Bringmann
Maintainer: Sacha Epskamp <mail@sachaepskamp.com>
Diff between mlVAR versions 0.3.1 dated 2016-07-04 and 0.3.2 dated 2016-07-20
DESCRIPTION | 8 ++++---- MD5 | 2 +- 2 files changed, 5 insertions(+), 5 deletions(-)
Title: Latent Class Item Response Theory (LC-IRT) Models under
Within-Item Multidimensionality
Description: Framework for the Item Response Theory analysis of dichotomous and ordinal polytomous outcomes under the assumption of within-item multidimensionality and discreteness of the latent traits. The fitting algorithms allow for missing responses and for different item parametrizations and are based on the Expectation-Maximization paradigm. Individual covariates affecting the class weights may be included in the new version together with possibility of constraints on all model parameters.
Author: Francesco Bartolucci, Silvia Bacci - University of Perugia (IT)
Maintainer: Francesco Bartolucci <bart@stat.unipg.it>
Diff between MLCIRTwithin versions 1.1 dated 2016-02-03 and 2.0 dated 2016-07-20
MLCIRTwithin-1.1/MLCIRTwithin/R/est_multi_glob_gen.R |only MLCIRTwithin-1.1/MLCIRTwithin/R/inv_glob.R |only MLCIRTwithin-1.1/MLCIRTwithin/man/est_multi_glob_gen.Rd |only MLCIRTwithin-1.1/MLCIRTwithin/man/inv_glob.Rd |only MLCIRTwithin-2.0/MLCIRTwithin/DESCRIPTION | 10 MLCIRTwithin-2.0/MLCIRTwithin/MD5 | 54 MLCIRTwithin-2.0/MLCIRTwithin/NAMESPACE | 12 MLCIRTwithin-2.0/MLCIRTwithin/R/blkdiag.R |only MLCIRTwithin-2.0/MLCIRTwithin/R/coef.est_multi_poly_between.R |only MLCIRTwithin-2.0/MLCIRTwithin/R/coef.est_multi_poly_within.R |only MLCIRTwithin-2.0/MLCIRTwithin/R/confint.est_multi_poly_between.R |only MLCIRTwithin-2.0/MLCIRTwithin/R/confint.est_multi_poly_within.R |only MLCIRTwithin-2.0/MLCIRTwithin/R/est_multi_glob_genZ.R |only MLCIRTwithin-2.0/MLCIRTwithin/R/est_multi_poly_between.R | 1031 +++--- MLCIRTwithin-2.0/MLCIRTwithin/R/est_multi_poly_within.R | 1644 ++++------ MLCIRTwithin-2.0/MLCIRTwithin/R/lk_obs_score_between.R | 57 MLCIRTwithin-2.0/MLCIRTwithin/R/lk_obs_score_within.R | 134 MLCIRTwithin-2.0/MLCIRTwithin/R/logLik.est_multi_poly_between.R |only MLCIRTwithin-2.0/MLCIRTwithin/R/logLik.est_multi_poly_within.R |only MLCIRTwithin-2.0/MLCIRTwithin/R/search.model_between.R | 18 MLCIRTwithin-2.0/MLCIRTwithin/R/search.model_within.R | 57 MLCIRTwithin-2.0/MLCIRTwithin/R/vcov.est_multi_poly_between.R |only MLCIRTwithin-2.0/MLCIRTwithin/R/vcov.est_multi_poly_within.R |only MLCIRTwithin-2.0/MLCIRTwithin/man/MLCIRTwithin-package.Rd | 22 MLCIRTwithin-2.0/MLCIRTwithin/man/blkdiag.Rd |only MLCIRTwithin-2.0/MLCIRTwithin/man/coef.est_multi_poly_between.Rd |only MLCIRTwithin-2.0/MLCIRTwithin/man/coef.est_multi_poly_within.Rd |only MLCIRTwithin-2.0/MLCIRTwithin/man/confint.est_multi_poly_between.Rd |only MLCIRTwithin-2.0/MLCIRTwithin/man/confint.est_multi_poly_within.Rd |only MLCIRTwithin-2.0/MLCIRTwithin/man/est_multi_glob_genZ.Rd |only MLCIRTwithin-2.0/MLCIRTwithin/man/est_multi_poly_between.Rd | 127 MLCIRTwithin-2.0/MLCIRTwithin/man/est_multi_poly_within.Rd | 210 - MLCIRTwithin-2.0/MLCIRTwithin/man/lk_obs_score_between.Rd | 21 MLCIRTwithin-2.0/MLCIRTwithin/man/lk_obs_score_within.Rd | 29 MLCIRTwithin-2.0/MLCIRTwithin/man/logLik.est_multi_poly_between.Rd |only MLCIRTwithin-2.0/MLCIRTwithin/man/logLik.est_multi_poly_within.Rd |only MLCIRTwithin-2.0/MLCIRTwithin/man/search.model_between.Rd | 21 MLCIRTwithin-2.0/MLCIRTwithin/man/search.model_within.Rd | 30 MLCIRTwithin-2.0/MLCIRTwithin/man/vcov.est_multi_poly_between.Rd |only MLCIRTwithin-2.0/MLCIRTwithin/man/vcov.est_multi_poly_within.Rd |only 40 files changed, 1792 insertions(+), 1685 deletions(-)
Title: Statistical Analysis of Metabolite Profile
Description: An easy to use tool provides a graphical user interface for quality control based signal correction, integration of metabolomic data from multiple batches, and the comprehensive statistic analysis for non-targeted and targeted approaches.
Author: Hemi Luan
Maintainer: Hemi Luan <hemi.luan@gmail.com>
Diff between statTarget versions 1.2.0 dated 2016-07-18 and 1.2.2 dated 2016-07-20
statTarget-1.2.0/statTarget/R/statTarget |only statTarget-1.2.2/statTarget/DESCRIPTION | 18 ++-- statTarget-1.2.2/statTarget/MD5 | 88 ++++---------------- statTarget-1.2.2/statTarget/NAMESPACE | 12 ++ statTarget-1.2.2/statTarget/R/Plot.pca.loading.R | 2 statTarget-1.2.2/statTarget/R/Plot.pca.score.stat.R | 4 statTarget-1.2.2/statTarget/R/Plot.plsda.stat.R | 8 - statTarget-1.2.2/statTarget/R/RandomF.R | 2 statTarget-1.2.2/statTarget/R/cov.trob_sT.R |only statTarget-1.2.2/statTarget/R/dataEllipse_sT.R |only statTarget-1.2.2/statTarget/R/ellipse_sT.R |only statTarget-1.2.2/statTarget/R/flipdim_sT.R |only statTarget-1.2.2/statTarget/R/glog.R |only statTarget-1.2.2/statTarget/R/loplot_v1.R | 4 statTarget-1.2.2/statTarget/R/oplsda.R | 10 +- statTarget-1.2.2/statTarget/R/plsda.stat.R | 8 - statTarget-1.2.2/statTarget/R/showLables_sT.R |only statTarget-1.2.2/statTarget/R/statAnalysis.R | 6 - statTarget-1.2.2/statTarget/R/volcano.R | 4 statTarget-1.2.2/statTarget/R/work.dir.R | 12 ++ statTarget-1.2.2/statTarget/R/zzz.R | 2 statTarget-1.2.2/statTarget/inst/doc/statTarget.pdf |binary 22 files changed, 74 insertions(+), 106 deletions(-)
Title: R Interface for China National Data
Description: R interface for china national data http://data.stats.gov.cn/,
some convenient functions for accessing the national data are provided.
Author: Xuehui YANG
Maintainer: Xuehui YANG <jianghang@bagualu.net>
Diff between rstatscn versions 1.0.2 dated 2016-02-26 and 1.1.1 dated 2016-07-20
DESCRIPTION | 13 +++++++------ MD5 | 13 +++++++++---- NAMESPACE | 1 + NEWS.md | 7 +++++++ R/rstatscn.R | 28 ++++++++++++++++++++++++++++ man/checkHttpStatus.Rd |only man/dataJson2df.Rd |only man/genDfwds.Rd |only man/milSec.Rd |only man/statscnRowNamePrefix.Rd |only 10 files changed, 52 insertions(+), 10 deletions(-)
Title: Extract Data Tables and Comments from Microsoft Word Documents
Description: Microsoft Word docx files provide an XML structure that is fairly
straightforward to navigate, especially when it applies to Word tables and
comments. Tools are provided to determine table count/structure, comment count
and also to extract/clean tables and comments from Microsoft Word docx documents.
Author: Bob Rudis [aut, cre]
Maintainer: Bob Rudis <bob@rudis.net>
Diff between docxtractr versions 0.1.0.9000 dated 2015-08-29 and 0.2.0 dated 2016-07-20
DESCRIPTION | 17 ++++++----- MD5 | 39 ++++++++++++++++----------- NAMESPACE | 15 +++++++++- NEWS.md |only R/aaa.r |only R/describe.r | 38 ++++++++++++++++++++++++++ R/docx_find_tbls.r | 13 +++++++++ R/docxtractr-package.r | 11 ++++--- R/extract_all.r | 60 ++++++++++++++++++++++++++++++++++++++---- R/read_docs.r | 12 +++++++- R/utils.r | 2 - inst/examples/comments.docx |only man/assign_colnames.Rd | 2 - man/docx_cmnt_count.Rd |only man/docx_describe_cmnts.Rd |only man/docx_describe_tbls.Rd | 2 - man/docx_extract_all.Rd | 6 ++-- man/docx_extract_all_cmnts.Rd |only man/docx_extract_all_tbls.Rd |only man/docx_extract_tbl.Rd | 2 - man/docx_tbl_count.Rd | 2 - man/docxtractr.Rd | 7 ++-- man/print.docx.Rd | 2 - man/read_docx.Rd | 4 +- 24 files changed, 183 insertions(+), 51 deletions(-)