Title: Simultaneous Signal Analysis
Description: Procedures for analyzing simultaneous signals, e.g., features that are simultaneously significant in two different studies. Includes methods for detecting simultaneous signals, for identifying them under false discovery rate control, and for leveraging them to improve prediction.
Author: Dave Zhao [aut, cre]
Maintainer: Dave Zhao <sdzhao@illinois.edu>
Diff between ssa versions 1.2.0 dated 2016-06-29 and 1.2.1 dated 2016-07-23
DESCRIPTION | 6 - MD5 | 40 ++++----- NAMESPACE | 2 R/neb.R | 156 +++++++++++++++++------------------ R/nebula.R | 111 +++++++++++++------------ R/npmle.R | 2 R/prs.R | 174 +++++++++++++++++++++++++++++++++++----- man/neb.predict.Rd | 2 man/neb.train.Rd | 9 +- man/nebula.bin.predict.Rd | 6 - man/nebula.bin.train.Rd | 12 +- man/nebula.chisq.bin.predict.Rd | 6 - man/nebula.chisq.bin.train.Rd | 14 +-- man/nebula.chisq.predict.Rd | 6 - man/nebula.chisq.train.Rd | 12 +- man/nebula.predict.Rd | 12 +- man/nebula.train.Rd | 18 ++-- man/prs.predict.Rd | 8 - man/prs.predict.cv.Rd |only man/prs.train.Rd | 14 ++- man/prs.train.cv.Rd |only man/tri.npmle.Rd | 2 22 files changed, 383 insertions(+), 229 deletions(-)
Title: An R SVG Graphics Device with Dynamic Tips and Hyperlinks
Description: A graphics device for R that uses the w3.org xml standard
for Scalable Vector Graphics. This version supports
tooltips with 1 to 3 lines, hyperlinks, and line styles.
Author: Tony Plate <tplate@acm.org>, based on RSvgDevice by T Jake Luciani <jakeluciani@yahoo.com>
Maintainer: Tony Plate <tplate@acm.org>
Diff between RSVGTipsDevice versions 1.0-4 dated 2011-11-27 and 1.0-7 dated 2016-07-23
RSVGTipsDevice-1.0-4/RSVGTipsDevice/DevNotes.txt |only RSVGTipsDevice-1.0-4/RSVGTipsDevice/NOTES.txt |only RSVGTipsDevice-1.0-4/RSVGTipsDevice/TODO.txt |only RSVGTipsDevice-1.0-4/RSVGTipsDevice/oldsrc |only RSVGTipsDevice-1.0-7/RSVGTipsDevice/DESCRIPTION | 11 RSVGTipsDevice-1.0-7/RSVGTipsDevice/MD5 | 21 RSVGTipsDevice-1.0-7/RSVGTipsDevice/NAMESPACE | 1 RSVGTipsDevice-1.0-7/RSVGTipsDevice/NEWS | 8 RSVGTipsDevice-1.0-7/RSVGTipsDevice/R/SVG.R | 4 RSVGTipsDevice-1.0-7/RSVGTipsDevice/man/RSVGTipsDevice.Rd | 42 RSVGTipsDevice-1.0-7/RSVGTipsDevice/man/RSVGTipsDevice.design.Rd | 8 RSVGTipsDevice-1.0-7/RSVGTipsDevice/man/devSVGTips.Rd | 18 RSVGTipsDevice-1.0-7/RSVGTipsDevice/src/devSVG.c | 567 +++++++--- 13 files changed, 479 insertions(+), 201 deletions(-)
More information about RSVGTipsDevice at CRAN
Permanent link
Title: Rigorous - NIfTI + ANALYZE + AFNI : Input / Output
Description: Functions for the input/output and visualization of
medical imaging data that follow either the ANALYZE, NIfTI or AFNI
formats. This package is part of the Rigorous Analytics bundle.
Author: Brandon Whitcher [aut, cre],
Volker Schmid [aut],
Andrew Thornton [aut],
Karsten Tabelow [ctb],
Jon Clayden [ctb],
John Muschelli [ctb]
Maintainer: Brandon Whitcher <bwhitcher@gmail.com>
Diff between oro.nifti versions 0.5.2 dated 2015-05-07 and 0.5.5.2 dated 2016-07-23
DESCRIPTION | 14 + LICENSE | 2 MD5 | 258 +++++++++++++++++----------------- NAMESPACE | 5 R/Operators.R | 1 R/anlz_Operators.R | 1 R/drop_img_dim.R | 8 - R/hotmetal.R | 1 R/voxres.R |only build/vignette.rds |binary inst/doc/nifti.pdf |binary man/afni-class.Rd | 5 man/anlz-class.Rd | 3 man/anlz-nifti-ops.Rd | 6 man/anlz.Rd | 6 man/as.anlz.Rd | 2 man/as.nifti.Rd | 4 man/audit_trail-methods.Rd | 2 man/audit_trail.Rd | 10 - man/aux_file-methods.Rd | 2 man/bitpix-methods.Rd | 2 man/bitwise.Rd | 2 man/blend-methods.Rd | 24 +-- man/cal_img.Rd | 16 +- man/cal_max-methods.Rd | 2 man/cal_min-methods.Rd | 2 man/cal_units-methods.Rd | 2 man/coerce-methods.Rd | 24 +-- man/compressed-methods.Rd | 2 man/convert_afni.Rd | 3 man/convert_anlz.Rd | 8 - man/convert_nifti.Rd | 8 - man/data_type-methods.Rd | 2 man/datatype-methods.Rd | 2 man/db_name-methods.Rd | 2 man/descrip-methods.Rd | 2 man/dim_-methods.Rd | 2 man/dim_info-methods.Rd | 2 man/dim_un0-methods.Rd | 2 man/drop_img_dim.Rd | 13 - man/exp_date-methods.Rd | 2 man/exp_time-methods.Rd | 2 man/extender-methods.Rd | 2 man/extents-methods.Rd | 2 man/field_skip-methods.Rd | 2 man/funused1-methods.Rd | 2 man/funused2-methods.Rd | 2 man/funused3-methods.Rd | 2 man/generated-methods.Rd | 2 man/glmax-methods.Rd | 2 man/glmin-methods.Rd | 2 man/hist_un0-methods.Rd | 2 man/hkey_un0-methods.Rd | 2 man/hotmetal.Rd | 6 man/image-methods.Rd | 2 man/integerTranslation.Rd | 2 man/intent_code-methods.Rd | 2 man/intent_name-methods.Rd | 2 man/intent_p1-methods.Rd | 2 man/intent_p2-methods.Rd | 2 man/intent_p3-methods.Rd | 2 man/is_afni.Rd | 2 man/is_anlz.Rd | 2 man/is_nifti.Rd | 2 man/magic-methods.Rd | 2 man/miscellaneous.Rd | 2 man/nifti-class.Rd | 3 man/nifti.Rd | 3 man/niftiAuditTrail-class.Rd | 4 man/niftiExtension-class.Rd | 2 man/niftiExtensionSection-class.Rd | 3 man/nifti_assign-methods.Rd | 32 ++-- man/niftiops.Rd | 6 man/omax-methods.Rd | 2 man/omin-methods.Rd | 2 man/onefile.Rd | 6 man/orient-methods.Rd | 2 man/orientation-methods.Rd | 3 man/origin-methods.Rd | 2 man/orthographic-methods.Rd | 2 man/overlay-methods.Rd | 16 +- man/patient_id-methods.Rd | 2 man/performPermutation.Rd | 2 man/pixdim-methods.Rd | 2 man/qform_code-methods.Rd | 2 man/qoffset_x-methods.Rd | 2 man/qoffset_y-methods.Rd | 2 man/qoffset_z-methods.Rd | 2 man/quatern_b-methods.Rd | 2 man/quatern_c-methods.Rd | 2 man/quatern_d-methods.Rd | 2 man/quaternion2rotation.Rd | 3 man/read_afni.Rd | 2 man/read_anlz.Rd | 3 man/read_nifti.Rd | 5 man/regular-methods.Rd | 2 man/remove.Rd | 2 man/reorient.Rd | 2 man/scannum-methods.Rd | 2 man/scl_inter-methods.Rd | 2 man/scl_slope-methods.Rd | 2 man/session_error-methods.Rd | 2 man/sform_code-methods.Rd | 2 man/sizeof_hdr-methods.Rd | 2 man/slice_code-methods.Rd | 2 man/slice_duration-methods.Rd | 2 man/slice_end-methods.Rd | 2 man/slice_start-methods.Rd | 2 man/smax-methods.Rd | 2 man/smin-methods.Rd | 2 man/srow_x-methods.Rd | 2 man/srow_y-methods.Rd | 2 man/srow_z-methods.Rd | 2 man/start_field-methods.Rd | 2 man/tim_colors.Rd | 11 - man/toffset-methods.Rd | 2 man/transformCoordinate.Rd | 29 +-- man/unused1-methods.Rd | 2 man/verified-methods.Rd | 2 man/views-methods.Rd | 2 man/vols_added-methods.Rd | 2 man/vox_offset-methods.Rd | 2 man/vox_units-methods.Rd | 2 man/voxdim.Rd | 2 man/voxres.Rd |only man/write_afni-methods.Rd | 23 +-- man/write_anlz.Rd | 3 man/write_nifti.Rd | 3 man/xyzt_units-methods.Rd | 2 man/zero_trans.Rd | 6 tests/Examples/oro.nifti-Ex.Rout.save | 52 +++++- 131 files changed, 441 insertions(+), 371 deletions(-)
Title: A Modern and Flexible Web Client for R
Description: The curl() and curl_download() functions provide highly
configurable drop-in replacements for base url() and download.file() with
better performance, support for encryption (https, ftps), gzip compression,
authentication, and other libcurl goodies. The core of the package implements a
framework for performing fully customized requests where data can be processed
either in memory, on disk, or streaming via the callback or connection
interfaces. Some knowledge of libcurl is recommended; for a more-user-friendly
web client see the 'httr' package which builds on this package with http
specific tools and logic.
Author: Jeroen Ooms [cre, aut],
Hadley Wickham [ctb],
RStudio [cph]
Maintainer: Jeroen Ooms <jeroen.ooms@stat.ucla.edu>
Diff between curl versions 0.9.7 dated 2016-04-10 and 1.0 dated 2016-07-23
curl-0.9.7/curl/src/apple.h |only curl-1.0/curl/DESCRIPTION | 11 +- curl-1.0/curl/MD5 | 31 +++----- curl-1.0/curl/NEWS | 7 + curl-1.0/curl/R/download.R | 3 curl-1.0/curl/R/onload.R | 5 - curl-1.0/curl/build/vignette.rds |binary curl-1.0/curl/inst/doc/intro.html | 89 ++++++++++++++++++----- curl-1.0/curl/src/curl-common.h | 4 - curl-1.0/curl/src/curl.c | 16 +++- curl-1.0/curl/src/download.c | 5 - curl-1.0/curl/src/handle.c | 5 - curl-1.0/curl/src/nslookup.c | 3 curl-1.0/curl/src/version.c | 18 ++++ curl-1.0/curl/tests/testthat/helper-version.R | 1 curl-1.0/curl/tests/testthat/test-certificates.R | 12 +-- curl-1.0/curl/tests/testthat/test-handle.R | 33 +++++--- 17 files changed, 172 insertions(+), 71 deletions(-)
Title: Taxonomic Information from Around the Web
Description: Interacts with a suite of web 'APIs' for taxonomic tasks,
such as verifying species names, and getting taxonomic 'hierarchies'.
Author: Scott Chamberlain [aut, cre],
Eduard Szoecs [aut],
Zachary Foster [aut],
Carl Boettiger [aut],
Karthik Ram [aut],
Ignasi Bartomeus [aut],
John Baumgartner [aut],
James O'Donnell [aut]
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>
Diff between taxize versions 0.7.8 dated 2016-06-17 and 0.7.9 dated 2016-07-23
DESCRIPTION | 12 - MD5 | 133 ++++++------- NAMESPACE | 2 NEWS.md | 39 +++ R/children.R | 2 R/classification.R | 8 R/downstream.R | 2 R/eubon.R | 2 R/get_boldid.R | 78 ++++--- R/get_colid.R | 55 +++-- R/get_eolid.R | 53 +++-- R/get_gbifid.R | 63 +++--- R/get_ids.R | 2 R/get_nbnid.R | 45 ++-- R/get_tpsid.R | 56 +++-- R/get_tsn.R | 98 +++++---- R/get_ubioid.R | 2 R/get_uid.R | 65 +++--- R/gnr_resolve.R | 25 +- R/ion.R | 2 R/ipni_search.R | 2 R/itis.R | 26 +- R/lowest_common.R | 2 R/ping.R | 4 R/synonyms.R | 2 R/taxize-package.R | 17 - R/tpl_get.r | 2 R/upstream.R | 2 R/zzz.R | 22 +- README.md | 78 ++++++- build/vignette.rds |binary inst/CITATION | 4 inst/doc/name_cleaning.Rmd |only inst/doc/name_cleaning.html |only inst/vign/name_cleaning.Rmd |only inst/vign/name_cleaning.md |only inst/vign/taxize_vignette.md | 351 +++++++++++++++++++++-------------- man/children.Rd | 2 man/classification.Rd | 2 man/downstream.Rd | 2 man/get_boldid.Rd | 31 ++- man/get_colid.Rd | 26 ++ man/get_eolid.Rd | 28 ++ man/get_gbifid.Rd | 27 ++ man/get_ids.Rd | 2 man/get_nbnid.Rd | 28 ++ man/get_tpsid.Rd | 29 ++ man/get_tsn.Rd | 38 ++- man/get_ubioid-defunct.Rd | 2 man/get_uid.Rd | 28 ++ man/ion.Rd | 2 man/ipni_search.Rd | 2 man/lowest_common.Rd | 2 man/plantGenusNames.Rd | 4 man/plantNames.Rd | 4 man/synonyms.Rd | 2 man/taxize-package.Rd | 4 man/theplantlist.Rd | 4 man/tpl_get.Rd | 2 man/upstream.Rd | 2 tests/testthat/Rplots.pdf |only tests/testthat/test-classification.R | 13 + tests/testthat/test-fungorum.R | 2 tests/testthat/test-get_gbifid.R |only tests/testthat/test-get_tpsid.R | 2 tests/testthat/test-get_tsn.R | 2 tests/testthat/test-gnr_resolve.R | 12 - tests/testthat/test-ion.R | 46 ++-- tests/testthat/test-ipni_search.R | 86 ++++---- tests/testthat/test-ping.R | 20 - vignettes/name_cleaning.Rmd |only 71 files changed, 1083 insertions(+), 629 deletions(-)
Title: Numerical Integration over Spheres and Balls in n-Dimensions;
Multivariate Polar Coordinates
Description: Provides several methods to integrate functions over the unit
sphere and ball in n-dimensional Euclidean space. Routines for converting to/from
multivariate polar/spherical coordinates are also provided.
Author: John P. Nolan, American University
Maintainer: John P. Nolan <jpnolan@american.edu>
Diff between SphericalCubature versions 1.1 dated 2016-05-17 and 1.2 dated 2016-07-23
DESCRIPTION | 8 ++--- MD5 | 10 +++--- R/SphericalCubature.R | 29 +++++++++++++++++-- demo/SphericalCubature.R | 42 ++++++++++++++++++++++++++++ man/SphericalCubature-package.Rd | 10 ++++-- man/adaptIntegrateSphereTri.Rd | 57 +++++++++++++++++++-------------------- 6 files changed, 112 insertions(+), 44 deletions(-)
More information about SphericalCubature at CRAN
Permanent link
Title: Rosette API
Description: Rosette is an API for multilingual text analysis and information extraction. More information can be found at <https://developer.rosette.com>.
Author: Sam Hausmann
Maintainer: Sam Hausmann <shausmann@basistech.com>
Diff between rosetteApi versions 1.0 dated 2016-05-22 and 1.2.0 dated 2016-07-23
rosetteApi-1.0/rosetteApi/man/check_version.Rd |only rosetteApi-1.2.0/rosetteApi/DESCRIPTION | 10 rosetteApi-1.2.0/rosetteApi/MD5 | 23 - rosetteApi-1.2.0/rosetteApi/NAMESPACE | 3 rosetteApi-1.2.0/rosetteApi/R/Api.R | 140 +++++++---- rosetteApi-1.2.0/rosetteApi/README.md | 6 rosetteApi-1.2.0/rosetteApi/man/api.Rd | 14 + rosetteApi-1.2.0/rosetteApi/man/check_for_multipart.Rd | 4 rosetteApi-1.2.0/rosetteApi/man/get_endpoint.Rd | 4 rosetteApi-1.2.0/rosetteApi/man/mutipart_call.Rd | 4 rosetteApi-1.2.0/rosetteApi/man/post_endpoint.Rd | 4 rosetteApi-1.2.0/rosetteApi/man/serialize_name_parameters.Rd |only rosetteApi-1.2.0/rosetteApi/man/serialize_parameters.Rd |only rosetteApi-1.2.0/rosetteApi/vignettes/my-vignette.Rmd | 2 14 files changed, 150 insertions(+), 64 deletions(-)
Title: Nash Optimal Party Positions
Description: Estimation of party/candidate ideological positions
that correspond to a Nash equilibrium along a
one-dimensional space.
Author: Luigi Curini, Stefano M. Iacus
Maintainer: Stefano M. Iacus <stefano.iacus@unimi.it>
Diff between nopp versions 1.0.6 dated 2015-08-21 and 1.0.8 dated 2016-07-23
DESCRIPTION | 10 +- MD5 | 20 ++--- NAMESPACE | 9 +- R/equilibrium.R | 141 ++++++++++++++++++++++++++++++++++++ R/plot.nash.eq.R | 201 +++++++++++++++++++++++++++++++++++----------------- R/print.nash.eq.R | 59 ++++++++++----- R/set.data.R |only inst/NEWS | 11 +- inst/doc/nopp.pdf |binary man/equilibrium.Rd | 7 + man/plot.nash.eq.Rd | 2 man/set.data.Rd |only 12 files changed, 351 insertions(+), 109 deletions(-)
Title: Linear Mixed Effects Models with Non-Stationary Stochastic
Processes
Description: Contains functions to estimate model parameters and filter, smooth and forecast random effects coefficients for mixed models with stationary and non-stationary stochastic processes under multivariate normal and t response distributions, diagnostic checks, bootstrap standard error calculation, etc.
Author: Ozgur Asar, Peter J. Diggle
Maintainer: Ozgur Asar <ozgur.asar@acibadem.edu.tr>
Diff between lmenssp versions 1.1 dated 2015-07-17 and 1.2 dated 2016-07-23
DESCRIPTION | 10 +++++----- MD5 | 10 +++++----- R/smoothed.heavy.R | 1 + man/lmenssp-package.Rd | 4 ++-- man/lmenssp.heavy.Rd | 5 +++-- man/smoothed.heavy.Rd | 5 +++-- 6 files changed, 19 insertions(+), 16 deletions(-)
Title: Bindings to the CommonMark Reference Implementation
Description: The CommonMark specification defines a rationalized version of markdown
syntax. This package uses the libcmark reference implementation for converting
markdown text into various formats including html, latex and groff man. In
addition it exposes the markdown parse tree in xml format.
Author: Jeroen Ooms [aut, cre],
John MacFarlane [cph] (Author of cmark)
Maintainer: Jeroen Ooms <jeroen.ooms@stat.ucla.edu>
Diff between commonmark versions 0.8 dated 2016-03-30 and 0.9 dated 2016-07-23
DESCRIPTION | 6 MD5 | 62 - NEWS | 3 src/Makevars | 17 src/cmark/blocks.c | 524 +++++------ src/cmark/buffer.c | 77 - src/cmark/buffer.h | 29 src/cmark/chunk.h | 45 src/cmark/cmark.c | 16 src/cmark/cmark.h | 52 + src/cmark/cmark_ctype.c | 2 src/cmark/cmark_ctype.h | 2 src/cmark/cmark_export.h | 7 src/cmark/cmark_version.h | 4 src/cmark/commonmark.c | 71 - src/cmark/html.c | 4 src/cmark/inlines.c | 383 ++++---- src/cmark/inlines.h | 10 src/cmark/iterator.c | 13 src/cmark/iterator.h | 2 src/cmark/latex.c | 18 src/cmark/main.c | 9 src/cmark/man.c | 14 src/cmark/node.c | 64 - src/cmark/node.h | 26 src/cmark/parser.h | 6 src/cmark/references.c | 48 - src/cmark/references.h | 4 src/cmark/render.c | 23 src/cmark/render.h | 4 src/cmark/scanners.c | 2093 +++++++++++++++++++++++----------------------- src/cmark/xml.c | 2 32 files changed, 1863 insertions(+), 1777 deletions(-)
Title: Fast Calculation of Spillover Measures
Description: Functions for computing spillover measures, especially spillover
tables and spillover indices, as well as their average, minimal, and maximal
values.
Author: Stefan Kloessner [aut, cre],
Sven Wagner [aut]
Maintainer: Stefan Kloessner <S.Kloessner@mx.uni-saarland.de>
Diff between fastSOM versions 0.9 dated 2012-10-04 and 1.0.0 dated 2016-07-23
DESCRIPTION | 28 ++++++++++++++---------- MD5 | 39 +++++++++++++++++---------------- NAMESPACE | 8 ++++++ NEWS |only R/Helpers.r | 2 - R/SOI.r | 15 ++++++++++++ R/SOI_avg_est.r | 5 ++-- R/SOI_avg_exact.r | 4 +-- R/SOT.r | 2 - R/SOT_avg_est.r | 4 +-- R/SOT_avg_exact.r | 4 +-- inst/CITATION | 12 +++++----- man/fastSOM-package.Rd | 14 ++++++------ man/soi.Rd | 10 ++++---- man/soi_avg_est.Rd | 10 ++++---- man/soi_avg_exact.Rd | 12 +++++----- man/soi_from_sot.Rd | 12 +++++----- man/sot.Rd | 8 +++--- man/sot_avg_est.Rd | 10 ++++---- man/sot_avg_exact.Rd | 8 +++--- src/SOM.c | 57 ++++++++++++++++++++++++++++++++++++++++++++----- 21 files changed, 170 insertions(+), 94 deletions(-)
Title: Deconvolution of Tumour Profiles
Description: Deconvolution of mixed tumour profiles into normal and cancer for each patient, using
the ISOpure algorithm in Quon et al. Genome Medicine, 2013 5:29. Deconvolution requires
mixed tumour profiles and a set of unmatched "basis" normal profiles.
Author: Gerald Quon [aut], Catalina V Anghel [aut, trl], Syed Haider [aut], Francis Nguyen [aut], Amit G Deshwar [aut], Quaid D
Morris [aut], Paul C Boutros [aut, cre]
Maintainer: Paul C Boutros <Paul.Boutros@oicr.on.ca>
Diff between ISOpureR versions 1.0.18 dated 2015-07-24 and 1.0.20 dated 2016-07-23
DESCRIPTION | 10 +++++----- MD5 | 12 ++++++------ NEWS | 19 +++++++++++++++++++ build/vignette.rds |binary inst/doc/ISOpureRGuide.Rnw | 3 ++- inst/doc/ISOpureRGuide.pdf |binary vignettes/ISOpureRGuide.Rnw | 3 ++- 7 files changed, 34 insertions(+), 13 deletions(-)
Title: Full Text of 'Scholarly' Articles Across Many Data Sources
Description: Provides a single interface to many sources of full text
'scholarly' data, including 'Biomed Central', Public Library of
Science, 'Pubmed Central', 'eLife', 'F1000Research', 'PeerJ',
'Pensoft', 'Hindawi', 'arXiv' 'preprints', and more. Functionality
included for searching for articles, downloading full or partial
text, downloading supplementary materials, converting to various
data formats used in and outside of R.
Author: Scott Chamberlain [aut, cre]
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>
Diff between fulltext versions 0.1.6 dated 2016-01-22 and 0.1.8 dated 2016-07-23
fulltext-0.1.6/fulltext/man/bmc.Rd |only fulltext-0.1.8/fulltext/DESCRIPTION | 12 fulltext-0.1.8/fulltext/MD5 | 79 +++--- fulltext-0.1.8/fulltext/NAMESPACE | 4 fulltext-0.1.8/fulltext/NEWS.md |only fulltext-0.1.8/fulltext/R/bio_utils.R | 8 fulltext-0.1.8/fulltext/R/bmc_utils.R | 123 ++-------- fulltext-0.1.8/fulltext/R/chunks.R | 16 - fulltext-0.1.8/fulltext/R/europe_pmc_utils.R | 6 fulltext-0.1.8/fulltext/R/ft_get.R | 35 +- fulltext-0.1.8/fulltext/R/ft_get_si.R | 71 ++++- fulltext-0.1.8/fulltext/R/ft_get_si_plugins.R | 64 +++-- fulltext-0.1.8/fulltext/R/ft_get_si_utils.R | 24 + fulltext-0.1.8/fulltext/R/ft_search.R | 21 + fulltext-0.1.8/fulltext/R/fulltext-package.R | 2 fulltext-0.1.8/fulltext/R/pdfx.R | 6 fulltext-0.1.8/fulltext/R/plugins_get.R | 7 fulltext-0.1.8/fulltext/R/plugins_get_old.R | 2 fulltext-0.1.8/fulltext/R/plugins_search.R | 14 - fulltext-0.1.8/fulltext/README.md | 86 +++---- fulltext-0.1.8/fulltext/build/vignette.rds |binary fulltext-0.1.8/fulltext/inst/doc/formats.Rmd | 4 fulltext-0.1.8/fulltext/inst/doc/formats.html | 4 fulltext-0.1.8/fulltext/inst/doc/fulltext_vignette.Rmd | 157 +++++++++---- fulltext-0.1.8/fulltext/inst/doc/fulltext_vignette.html | 157 +++++++++---- fulltext-0.1.8/fulltext/inst/doc/getting_fulltext.Rmd | 63 ++--- fulltext-0.1.8/fulltext/inst/doc/getting_fulltext.html | 63 ++--- fulltext-0.1.8/fulltext/inst/ignore/bmc_xml.R |only fulltext-0.1.8/fulltext/inst/vign/formats.Rmd | 4 fulltext-0.1.8/fulltext/inst/vign/formats.md | 4 fulltext-0.1.8/fulltext/inst/vign/fulltext_vignette.md | 157 +++++++++---- fulltext-0.1.8/fulltext/inst/vign/getting_fulltext.md | 63 ++--- fulltext-0.1.8/fulltext/man/bmc_search.Rd | 29 +- fulltext-0.1.8/fulltext/man/ft_get.Rd | 14 - fulltext-0.1.8/fulltext/man/ft_get_si.Rd | 20 + fulltext-0.1.8/fulltext/man/ft_search.Rd | 18 + fulltext-0.1.8/fulltext/tests/testthat/test-ft_get.r | 6 fulltext-0.1.8/fulltext/tests/testthat/test-ft_get_si.r | 23 + fulltext-0.1.8/fulltext/tests/testthat/test-ft_serialize.R | 8 fulltext-0.1.8/fulltext/vignettes/formats.Rmd | 4 fulltext-0.1.8/fulltext/vignettes/fulltext_vignette.Rmd | 157 +++++++++---- fulltext-0.1.8/fulltext/vignettes/getting_fulltext.Rmd | 63 ++--- 42 files changed, 936 insertions(+), 662 deletions(-)
Title: Discrete Global Grids for R
Description: Spatial analyses involving binning require that every bin have the same area, but this is impossible using a rectangular grid laid over the Earth or over any projection of the Earth. Discrete global grids use hexagons, triangles, and diamonds to overcome this issue, overlaying the Earth with equally-sized bins. This package provides utilities for working with discrete global grids, along with utilities to aid in plotting such data.
Author: Richard Barnes [aut, cre], Kevin Sahr [ctb], Gerald Evenden [ctb], Angus Johnson [ctb], Frank Warmerdam [ctb]
Maintainer: Richard Barnes <rbarnes@umn.edu>
Diff between dggridR versions 0.1.5 dated 2016-07-20 and 0.1.7 dated 2016-07-23
dggridR-0.1.5/dggridR/src/lib/proj4lib/include/emess.h |only dggridR-0.1.5/dggridR/src/lib/proj4lib/lib/emess.cpp |only dggridR-0.1.7/dggridR/DESCRIPTION | 9 dggridR-0.1.7/dggridR/MD5 | 202 ++++------ dggridR-0.1.7/dggridR/NEWS | 19 dggridR-0.1.7/dggridR/README.md | 15 dggridR-0.1.7/dggridR/src/Makevars | 12 dggridR-0.1.7/dggridR/src/Makevars.win | 12 dggridR-0.1.7/dggridR/src/apps/appex/Makefile | 18 dggridR-0.1.7/dggridR/src/apps/dggrid/DgHexSF.cpp | 19 dggridR-0.1.7/dggridR/src/apps/dggrid/DgHexSF.h | 5 dggridR-0.1.7/dggridR/src/apps/dggrid/Makefile | 18 dggridR-0.1.7/dggridR/src/apps/dggrid/binvals.cpp | 3 dggridR-0.1.7/dggridR/src/apps/dggrid/dggrid.cpp | 3 dggridR-0.1.7/dggridR/src/apps/dggrid/dggrid.h | 11 dggridR-0.1.7/dggridR/src/apps/dggrid/gridgen.cpp | 23 - dggridR-0.1.7/dggridR/src/apps/dggrid/param.cpp | 22 - dggridR-0.1.7/dggridR/src/apps/dggrid/transform.cpp | 7 dggridR-0.1.7/dggridR/src/lib/clipper/Makefile | 2 dggridR-0.1.7/dggridR/src/lib/clipper/clipper.cpp | 2 dggridR-0.1.7/dggridR/src/lib/clipper/clipper.hpp | 8 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgBoundedHexC2RF2D.h | 6 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgBoundedIDGG.h | 10 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgBoundedIDGGS.h | 6 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgBoundedRF.h | 16 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgBoundedRF2D.h | 12 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgBoundedRFBase.h | 16 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgBoundedRFS2D.h | 6 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgConstants.h | 6 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgContCartRF.h | 6 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgDVec2D.h | 3 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgDVec3D.h | 2 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgDiscRF.h | 30 - dggridR-0.1.7/dggridR/src/lib/dglib/include/DgDiscRF2D.h | 3 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgDiscRFS.h | 19 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgDistance.h | 3 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgDmdD4Grid2D.h | 3 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgDmdD8Grid2D.h | 8 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgEllipsoidRF.h | 27 - dggridR-0.1.7/dggridR/src/lib/dglib/include/DgGeoDatumRF.h | 4 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgGeoProjConverter.h | 6 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgGeoProjRF.h | 5 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgGeoSphRF.h | 2 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgHexC1Grid2D.h | 3 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgHexC2Grid2D.h | 3 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgIDGG.h | 61 +-- dggridR-0.1.7/dggridR/src/lib/dglib/include/DgIVec2D.h | 29 - dggridR-0.1.7/dggridR/src/lib/dglib/include/DgIVec3D.h | 29 - dggridR-0.1.7/dggridR/src/lib/dglib/include/DgParamList.h | 68 +-- dggridR-0.1.7/dggridR/src/lib/dglib/include/DgProjFuller.h | 2 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgProjISEA.h | 2 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgProjTriRF.h | 7 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgRF.h | 5 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgRFBase.h | 3 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgRFNetwork.h | 3 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgRandom.h | 2 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgSqrD4Grid2D.h | 7 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgSqrD8Grid2D.h | 8 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgString.h | 39 - dggridR-0.1.7/dggridR/src/lib/dglib/include/DgTriGrid2D.h | 3 dggridR-0.1.7/dggridR/src/lib/dglib/include/DgUtil.h | 34 - dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgBoundedHexC2RF2D.cpp | 9 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgBoundedIDGG.cpp | 14 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgBoundedIDGGS.cpp | 15 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgBoundedRF.hpp | 8 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgBoundedRF2D.cpp | 11 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgBoundedRFS2D.cpp | 19 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgColor.cpp | 6 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgDVec2D.cpp | 4 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgDVec3D.cpp | 5 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgEllipsoidRF.cpp | 64 +-- dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgGeoSphRF.cpp | 8 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgHexC1Grid2D.cpp | 15 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgHexC2Grid2D.cpp | 7 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgIDGG.cpp | 38 - dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgIDGGS4T.cpp | 9 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgIVec2D.cpp | 13 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgIVec3D.cpp | 15 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgIcosaMap.cpp | 8 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgInAIGenFile.cpp | 2 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgLocVector.cpp | 6 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgProjFuller.cpp | 37 - dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgProjGnomonicRF.cpp | 12 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgProjISEA.cpp | 53 +- dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgProjTriRF.cpp | 40 - dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgRF.hpp | 6 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgRFNetwork.cpp | 14 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgRandom.cpp | 4 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgTriGrid2D.cpp | 11 dggridR-0.1.7/dggridR/src/lib/dglib/lib/DgTriGrid2DS.cpp | 9 dggridR-0.1.7/dggridR/src/lib/dglib/lib/Makefile | 14 dggridR-0.1.7/dggridR/src/lib/proj4lib/include/proj4.h | 25 - dggridR-0.1.7/dggridR/src/lib/proj4lib/lib/Makefile | 23 - dggridR-0.1.7/dggridR/src/lib/proj4lib/lib/adjlon.cpp | 11 dggridR-0.1.7/dggridR/src/lib/proj4lib/lib/hypot.cpp | 9 dggridR-0.1.7/dggridR/src/lib/proj4lib/lib/pj_auth.cpp | 7 dggridR-0.1.7/dggridR/src/lib/proj4lib/lib/pj_mlfn.cpp | 9 dggridR-0.1.7/dggridR/src/lib/proj4lib/lib/pj_msfn.cpp | 5 dggridR-0.1.7/dggridR/src/lib/proj4lib/lib/pj_phi2.cpp | 12 dggridR-0.1.7/dggridR/src/lib/proj4lib/lib/pj_qsfn.cpp | 7 dggridR-0.1.7/dggridR/src/lib/proj4lib/lib/pj_tsfn.cpp | 10 dggridR-0.1.7/dggridR/src/lib/shapelib-1.3.0/dbfadd.c | 4 dggridR-0.1.7/dggridR/src/lib/shapelib-1.3.0/shpopen.c | 5 103 files changed, 780 insertions(+), 740 deletions(-)