Title: Somoclu
Description: Somoclu is a massively parallel implementation of self-organizing maps. It exploits multicore CPUs and it can be accelerated by CUDA. The topology of the map can be planar or toroid and the grid of neurons can be rectangular or hexagonal .
Author: Peter Wittek [aut], Shichao Gao [cre]
Maintainer: Shichao Gao <xgdgsc@gmail.com>
Diff between Rsomoclu versions 1.7.1 dated 2016-10-14 and 1.7.2 dated 2016-11-24
DESCRIPTION | 6 +-- MD5 | 26 ++++++++-------- R/Rsomoclu.R | 5 +-- data/rgbs.txt.gz |binary man/Rsomoclu.kohonen.Rd | 4 +- man/Rsomoclu.train.Rd | 9 +++-- src/Rsomoclu.cpp | 23 +++++++------- src/denseCpuKernels.cpp | 11 +++---- src/denseGpuKernels.cu | 10 +++--- src/mapDistanceFunctions.cpp | 10 +++--- src/somoclu.h | 22 +++++++------- src/sparseCpuKernels.cpp | 11 +++---- src/training.cpp | 66 ++++++++++++++++++++++--------------------- tests/R_interface_test.R | 3 + 14 files changed, 111 insertions(+), 95 deletions(-)
Title: Examples using 'Rcpp' to Interface R and C++
Description: Examples for Seamless R and C++ integration
The 'Rcpp' package contains a C++ library that facilitates the integration of
R and C++ in various ways. This package provides some usage examples.
Note that the documentation in this package currently does not cover all the
features in the package. It is not even close. On the other hand, the site
<http://gallery.rcpp.org> is regrouping a large number of examples for 'Rcpp'.
Author: Dirk Eddelbuettel and Romain Francois
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppExamples versions 0.1.7 dated 2016-01-24 and 0.1.8 dated 2016-11-24
ChangeLog | 22 ++++++++++++++++++++++ DESCRIPTION | 9 +++++---- MD5 | 16 ++++++++-------- R/RcppDateExample.R | 6 ++++++ README.md | 4 ++-- inst/NEWS.Rd | 19 ++++++++++++++----- src/DateExample.cpp | 28 +++++++++++++++++++++------- src/Makevars | 1 + src/Makevars.win | 2 ++ 9 files changed, 81 insertions(+), 26 deletions(-)
Title: Plot a Model's Response and Residuals
Description: Plot model surfaces for a wide variety of models
using partial dependence plots and other techniques.
Also plot model residuals and other information on the model.
Author: Stephen Milborrow
Maintainer: Stephen Milborrow <milbo@sonic.net>
Diff between plotmo versions 3.3.0 dated 2016-11-11 and 3.3.1 dated 2016-11-24
DESCRIPTION | 8 +- MD5 | 46 +++++------ NEWS | 15 +++ R/gbm.R | 1 R/methods.R | 33 ++++++-- R/plot_gbm.R | 24 +++--- R/plotmo.R | 35 +++++++++ R/w1.R | 3 R/xy.R | 6 + inst/doc/modguide.pdf |binary inst/doc/plotmo-notes.pdf |binary inst/doc/plotres-notes.pdf |binary inst/slowtests/test.caret.Rout.save | 30 +++++-- inst/slowtests/test.fac.Rout.save | 3 inst/slowtests/test.gbm.R | 79 ++++++++++---------- inst/slowtests/test.gbm.Rout.save | 83 ++++++++++----------- inst/slowtests/test.non.earth.R | 47 ++++++++---- inst/slowtests/test.non.earth.Rout.save | 116 +++++++++++++++++++++--------- inst/slowtests/test.plotmo.Rout.save | 12 ++- inst/slowtests/test.plotmo.dots.Rout.save | 6 + inst/slowtests/test.plotres.Rout.save | 6 + man/plotmo.Rd | 7 + man/plotres.Rd | 12 ++- tests/test.plotmo.Rout.save | 3 24 files changed, 378 insertions(+), 197 deletions(-)
Title: Visualization and Analysis Tools for Neural Networks
Description: Visualization and analysis tools to aid in the interpretation of
neural network models. Functions are available for plotting,
quantifying variable importance, conducting a sensitivity analysis, and
obtaining a simple list of model weights.
Author: Marcus W. Beck [aut, cre]
Maintainer: Marcus W. Beck <mbafs2012@gmail.com>
Diff between NeuralNetTools versions 1.4.0 dated 2015-12-01 and 1.5.0 dated 2016-11-24
DESCRIPTION | 11 +++--- MD5 | 46 ++++++++++++------------- NAMESPACE | 4 +- R/NeuralNetTools_gar.R | 10 ++--- R/NeuralNetTools_lek.R | 85 +++++++++++++++++++++++++++++------------------ R/NeuralNetTools_old.R | 8 +++- R/NeuralNetTools_plot.R | 35 +++++++++++++------ R/NeuralNetTools_utils.R | 55 ++++++++++++++++++------------ README.md | 16 ++++---- inst/CITATION | 2 - man/bias_lines.Rd | 2 - man/bias_points.Rd | 2 - man/garson.Rd | 21 ++++++----- man/get_ys.Rd | 2 - man/layer_lines.Rd | 2 - man/layer_points.Rd | 2 - man/lekgrps.Rd | 8 +++- man/lekprofile.Rd | 40 +++++++++++++--------- man/neuraldat.Rd | 2 - man/neuralskips.Rd | 8 ++-- man/neuralweights.Rd | 17 ++++----- man/olden.Rd | 17 +++++---- man/plotnet.Rd | 45 ++++++++++++++++-------- man/pred_sens.Rd | 9 ++-- 24 files changed, 269 insertions(+), 180 deletions(-)
More information about NeuralNetTools at CRAN
Permanent link
Title: Design and Analysis of Dose-Finding Studies
Description: Implements a methodology for the design and analysis of dose-response studies that
combines aspects of multiple comparison procedures and modeling approaches
(Bretz, Pinheiro and Branson, 2005, Biometrics 61, 738-748, <doi: 10.1111/j.1541-0420.2005.00344.x>).
The package provides tools for the analysis of dose finding trials as well as a variety
of tools necessary to plan a trial to be conducted with the MCP-Mod methodology.
Please note: The 'MCPMod' package will not be further developed, all future development of
the MCP-Mod methodology will be done in the 'DoseFinding' R-package.
Author: Bjoern Bornkamp, Jose Pinheiro and Frank Bretz
Maintainer: Bjoern Bornkamp <bornkamp@statistik.tu-dortmund.de>
Diff between MCPMod versions 1.0-8 dated 2014-11-26 and 1.0-9 dated 2016-11-24
DESCRIPTION | 25 ++++++++++++------------- MD5 | 12 ++++++------ NAMESPACE | 4 ++++ R/planMCPMod.R | 2 +- inst/doc/MCPMod.pdf |binary man/MCPMod-package.Rd | 4 ++-- man/mvtnorm.control.Rd | 2 +- 7 files changed, 26 insertions(+), 23 deletions(-)
Title: Dynamic Model Averaging with Grid Search
Description: Perform Dynamic Model Averaging with grid search as in Dangl and Halling (2012) <doi:10.1016/j.jfineco.2012.04.003> using parallel computing.
Author: Leopoldo Catania & Nima Nonejad
Maintainer: Leopoldo Catania <leopoldo.catania@uniroma2.it>
Diff between eDMA versions 1.3 dated 2016-11-14 and 1.3-2 dated 2016-11-24
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ build/partial.rdb |binary inst/doc/eDMA_1.1.pdf |binary man/eDMA-package.Rd | 4 ++-- src/Estimate.cpp | 2 +- src/Estimate_par.cpp | 2 +- 7 files changed, 14 insertions(+), 14 deletions(-)
Title: General Purpose Hierarchical Data Structure
Description: Create tree structures from hierarchical data, and traverse the
tree in various orders. Aggregate, cumulate, print, plot, convert to and from
data.frame and more. Useful for decision trees, machine learning, finance,
conversion from and to JSON, and many other applications.
Author: Facundo Munoz [ctb] (improve list conversion),
Markus Wamser [ctb] (fixed some typos),
Pierre Formont [ctb] (additional features),
Kent Russel [ctb] (documentation),
Noam Ross [ctb] (fixes),
Duncan Garmonsway [ctb] (fixes),
Christoph Glur [aut, cre] (R interface)
Maintainer: Christoph Glur <christoph.glur@ipub.com>
Diff between data.tree versions 0.4.0 dated 2016-07-04 and 0.6.2 dated 2016-11-24
data.tree-0.4.0/data.tree/README.md |only data.tree-0.6.2/data.tree/DESCRIPTION | 67 ++- data.tree-0.6.2/data.tree/MD5 | 94 ++-- data.tree-0.6.2/data.tree/NAMESPACE | 1 data.tree-0.6.2/data.tree/NEWS | 19 data.tree-0.6.2/data.tree/R/node.R | 33 - data.tree-0.6.2/data.tree/R/node_actives.R | 20 - data.tree-0.6.2/data.tree/R/node_conversion.R | 2 data.tree-0.6.2/data.tree/R/node_conversion_ape.R | 4 data.tree-0.6.2/data.tree/R/node_conversion_dataframe.R | 29 + data.tree-0.6.2/data.tree/R/node_conversion_list.R | 34 - data.tree-0.6.2/data.tree/R/node_conversion_party.R | 2 data.tree-0.6.2/data.tree/R/node_methods.R | 101 +++-- data.tree-0.6.2/data.tree/R/node_methods_sideeffect.R | 13 data.tree-0.6.2/data.tree/R/node_methods_traversal.R | 11 data.tree-0.6.2/data.tree/R/node_plot.R | 4 data.tree-0.6.2/data.tree/R/util.R | 8 data.tree-0.6.2/data.tree/build/vignette.rds |binary data.tree-0.6.2/data.tree/data/acme.rda |binary data.tree-0.6.2/data.tree/inst/doc/applications.R | 8 data.tree-0.6.2/data.tree/inst/doc/applications.Rmd | 14 data.tree-0.6.2/data.tree/inst/doc/applications.html | 175 ++++---- data.tree-0.6.2/data.tree/inst/doc/data.tree.R | 10 data.tree-0.6.2/data.tree/inst/doc/data.tree.Rmd | 17 data.tree-0.6.2/data.tree/inst/doc/data.tree.html | 198 +++++----- data.tree-0.6.2/data.tree/man/Aggregate.Rd | 2 data.tree-0.6.2/data.tree/man/Climb.Rd | 16 data.tree-0.6.2/data.tree/man/Distance.Rd |only data.tree-0.6.2/data.tree/man/FindNode.Rd | 2 data.tree-0.6.2/data.tree/man/Get.Rd | 7 data.tree-0.6.2/data.tree/man/GetAttribute.Rd | 5 data.tree-0.6.2/data.tree/man/GetPhyloNr.Rd | 4 data.tree-0.6.2/data.tree/man/Navigate.Rd | 5 data.tree-0.6.2/data.tree/man/Node.Rd | 7 data.tree-0.6.2/data.tree/man/Prune.Rd | 3 data.tree-0.6.2/data.tree/man/Revert.Rd | 1 data.tree-0.6.2/data.tree/man/SetFormat.Rd | 2 data.tree-0.6.2/data.tree/man/Sort.Rd | 3 data.tree-0.6.2/data.tree/man/as.Node.BinaryTree.Rd | 2 data.tree-0.6.2/data.tree/man/as.Node.data.frame.Rd | 2 data.tree-0.6.2/data.tree/man/as.data.frame.Node.Rd | 11 data.tree-0.6.2/data.tree/man/as.list.Node.Rd | 11 data.tree-0.6.2/data.tree/tests/testthat/test-treeConstruction.R | 8 data.tree-0.6.2/data.tree/tests/testthat/test-treeConversion.R | 18 data.tree-0.6.2/data.tree/tests/testthat/test-treeConversionDataFrame.R | 18 data.tree-0.6.2/data.tree/tests/testthat/test-treeMethods.R | 145 ++++--- data.tree-0.6.2/data.tree/tests/testthat/test-treeMethodsSideEffect.R | 6 data.tree-0.6.2/data.tree/vignettes/applications.Rmd | 14 data.tree-0.6.2/data.tree/vignettes/data.tree.Rmd | 17 49 files changed, 693 insertions(+), 480 deletions(-)
Title: Time-Course Gene Set Analysis for RNA-Seq Data
Description: Gene set analysis of longitudinal RNA-seq data with variance component
score test accounting for data heteroscedasticity through precision weights.
Author: Denis Agniel [aut],
Boris P. Hejblum [aut, cre]
Maintainer: Boris P. Hejblum <boris.hejblum@u-bordeaux.fr>
Diff between tcgsaseq versions 1.0.1 dated 2016-05-17 and 1.3.1 dated 2016-11-24
tcgsaseq-1.0.1/tcgsaseq/data/baduel_small.RData |only tcgsaseq-1.0.1/tcgsaseq/man/baduel_small.Rd |only tcgsaseq-1.3.1/tcgsaseq/DESCRIPTION | 16 tcgsaseq-1.3.1/tcgsaseq/LICENSE | 678 +++++------ tcgsaseq-1.3.1/tcgsaseq/MD5 | 72 - tcgsaseq-1.3.1/tcgsaseq/NAMESPACE | 15 tcgsaseq-1.3.1/tcgsaseq/NEWS | 17 tcgsaseq-1.3.1/tcgsaseq/R/PBT_gmt.R |only tcgsaseq-1.3.1/tcgsaseq/R/TcGSAseq-package.R | 11 tcgsaseq-1.3.1/tcgsaseq/R/baduel.R | 41 tcgsaseq-1.3.1/tcgsaseq/R/compute_nb_sim.R |only tcgsaseq-1.3.1/tcgsaseq/R/compute_nonlin_gene_sim.R |only tcgsaseq-1.3.1/tcgsaseq/R/compute_nonlin_sim.R |only tcgsaseq-1.3.1/tcgsaseq/R/compute_sim_voomlike.R | 279 ++-- tcgsaseq-1.3.1/tcgsaseq/R/compute_sim_voomlike_genewise.R |only tcgsaseq-1.3.1/tcgsaseq/R/data_sim_voomlike.R | 268 ++-- tcgsaseq-1.3.1/tcgsaseq/R/deseq_fn.R |only tcgsaseq-1.3.1/tcgsaseq/R/qAbundanceDist.R | 76 - tcgsaseq-1.3.1/tcgsaseq/R/sp_weights.R | 146 +- tcgsaseq-1.3.1/tcgsaseq/R/tcgsa_seq.R | 157 +- tcgsaseq-1.3.1/tcgsaseq/R/tcgsaseq_internal.R | 26 tcgsaseq-1.3.1/tcgsaseq/R/vc_score.R | 123 + tcgsaseq-1.3.1/tcgsaseq/R/vc_score_h.R |only tcgsaseq-1.3.1/tcgsaseq/R/vc_test_asym.R | 211 +-- tcgsaseq-1.3.1/tcgsaseq/R/vc_test_perm.R | 73 - tcgsaseq-1.3.1/tcgsaseq/R/voom_weights.R | 8 tcgsaseq-1.3.1/tcgsaseq/README | 3 tcgsaseq-1.3.1/tcgsaseq/data/PBT_gmt.RData |only tcgsaseq-1.3.1/tcgsaseq/data/baduel_5gs.RData |only tcgsaseq-1.3.1/tcgsaseq/data/datalist |only tcgsaseq-1.3.1/tcgsaseq/inst |only tcgsaseq-1.3.1/tcgsaseq/man/PBT_gmt.Rd |only tcgsaseq-1.3.1/tcgsaseq/man/baduel_5gs.Rd |only tcgsaseq-1.3.1/tcgsaseq/man/compute_sim_voomlike.Rd | 18 tcgsaseq-1.3.1/tcgsaseq/man/compute_sim_voomlike_genewise.Rd |only tcgsaseq-1.3.1/tcgsaseq/man/data_sim_voomlike.Rd | 4 tcgsaseq-1.3.1/tcgsaseq/man/deseq_fn.Rd |only tcgsaseq-1.3.1/tcgsaseq/man/nb_sim_fn.Rd |only tcgsaseq-1.3.1/tcgsaseq/man/nonlin_sim_fn.Rd |only tcgsaseq-1.3.1/tcgsaseq/man/sp_weights.Rd | 34 tcgsaseq-1.3.1/tcgsaseq/man/tcgsa_seq.Rd | 66 - tcgsaseq-1.3.1/tcgsaseq/man/tcgsaseq.Rd | 11 tcgsaseq-1.3.1/tcgsaseq/man/vc_score.Rd | 9 tcgsaseq-1.3.1/tcgsaseq/man/vc_score_h.Rd |only tcgsaseq-1.3.1/tcgsaseq/man/vc_test_asym.Rd | 43 tcgsaseq-1.3.1/tcgsaseq/man/vc_test_perm.Rd | 29 tcgsaseq-1.3.1/tcgsaseq/man/voom_weights.Rd | 6 47 files changed, 1426 insertions(+), 1014 deletions(-)
Title: Forecasting Time Series with Robust Exponential Smoothing
Description: We provide an outlier robust alternative of the function ets() in the 'forecast' package of Hyndman and Khandakar (2008)<DOI:10.18637/jss.v027.i03>. For each method of a class of exponential smoothing variants we made a robust alternative. The class includes methods with a damped trend and/or seasonal components. The robust method is developed by robustifying every aspect of the original exponential smoothing variant. We provide robust forecasting equations, robust initial values, robust smoothing parameter estimation and a robust information criterion. The method is described in more detail in Crevits and Croux (2016)<DOI:10.13140/RG.2.2.11791.18080>.
Author: Ruben Crevits [aut, cre]
Maintainer: Ruben Crevits <ruben.crevits@kuleuven.be>
Diff between robets versions 1.0 dated 2016-11-23 and 1.1 dated 2016-11-24
DESCRIPTION | 8 +++---- MD5 | 18 +++++++-------- R/robets.R | 10 ++++---- R/robetsforecast.R | 6 ++--- R/tau2.R | 2 - man/forecast.robets.Rd | 6 ++--- man/robets.Rd | 10 ++++---- man/tau2.Rd | 2 - src/robetsTargetFunction.cpp | 49 ++++++------------------------------------- src/robetsTargetFunction.h | 1 10 files changed, 38 insertions(+), 74 deletions(-)
More information about elasticsearchr at CRAN
Permanent link
Title: 'DBHYDRO' Hydrologic and Water Quality Data
Description: Client for programmatic access to the South Florida Water
Management District's 'DBHYDRO' database at
<http://sfwmd.gov/dbhydro>, with functions
for accessing hydrologic and water quality data.
Author: Joseph Stachelek [aut, cre]
Maintainer: Joseph Stachelek <stachel2@msu.edu>
Diff between dbhydroR versions 0.2-0 dated 2016-09-14 and 0.2-1 dated 2016-11-24
DESCRIPTION | 10 ++-- MD5 | 34 +++++++------- NEWS.md | 10 ++++ R/dbhydoR-package.R |only R/dbhydro_clean.R | 27 ++++++++--- R/dbhydro_get.R | 113 ++++++++++++++++++++++++++++++++---------------- README.md | 110 ++++++++++++++++++++++------------------------ build/vignette.rds |binary inst/CITATION | 2 inst/doc/dbhydroR.R | 38 ++++++++-------- inst/doc/dbhydroR.Rnw | 6 +- inst/doc/dbhydroR.pdf |binary man/clean_hydro.Rd | 5 +- man/clean_wq.Rd | 20 ++++++-- man/dbhydroR-package.Rd |only man/get_dbkey.Rd | 21 ++++++-- man/get_hydro.Rd | 26 ++++++++--- man/get_wq.Rd | 34 +++++++++++--- vignettes/dbhydroR.Rnw | 6 +- 19 files changed, 291 insertions(+), 171 deletions(-)
Title: Simple Features for R
Description: Support for simple features, a standardized way to encode spatial data, in R.
Author: Edzer Pebesma [aut, cre],
Roger Bivand [ctb],
Ian Cook [ctb],
Tim Keitt [ctb],
Michael Sumner [ctb],
Robin Lovelace [ctb],
Hadley Wickham [ctb],
Jeroen Ooms [ctb]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between sf versions 0.2-4 dated 2016-11-22 and 0.2-5 dated 2016-11-24
DESCRIPTION | 8 ++--- MD5 | 40 ++++++++++++------------- NAMESPACE | 1 R/RcppExports.R | 8 +++++ R/geom.R | 24 +++++++-------- R/init.R | 2 + R/sp.R | 4 ++ configure | 4 +- configure.in | 4 +- inst/doc/sf1.html | 9 +++-- inst/doc/sf2.html | 10 +++--- man/geos.Rd | 16 +++++----- src/RcppExports.cpp | 18 +++++++++++ src/geos.cpp | 72 +++++++++++++++++++++++++++++++++++++++------- tests/gdal_geom.R | 2 - tests/gdal_geom.Rout.save | 4 -- tests/pg.R | 2 + tests/pg.Rout.save | 4 +- tests/roundtrip.R | 6 +++ tests/roundtrip.Rout.save | 10 +++++- tests/testthat/test_sfc.R | 3 + 21 files changed, 176 insertions(+), 75 deletions(-)
Title: 'ViennaCL' C++ Header Files
Description: 'ViennaCL' is a free open-source linear algebra library
for computations on many-core architectures (GPUs, MIC) and
multi-core CPUs. The library is written in C++ and supports 'CUDA',
'OpenCL', and 'OpenMP' (including switches at runtime).
I have placed these libraries in this package as a more efficient
distribution system for CRAN. The idea is that you can write a package
that depends on the 'ViennaCL' library and yet you do not need to
distribute a copy of this code with your package.
Author: Charles Determan Jr.
Maintainer: Charles Determan Jr <cdetermanjr@gmail.com>
Diff between RViennaCL versions 1.7.1-1 dated 2016-03-15 and 1.7.1.4 dated 2016-11-24
DESCRIPTION | 19 MD5 | 514 NAMESPACE | 2 README.md | 58 build/partial.rdb |binary inst/NEWS.Rd | 31 inst/include/viennacl/backend/cpu_ram.hpp | 344 inst/include/viennacl/backend/cuda.hpp | 414 inst/include/viennacl/backend/mem_handle.hpp | 502 inst/include/viennacl/backend/memory.hpp | 1258 - inst/include/viennacl/backend/opencl.hpp | 304 inst/include/viennacl/backend/util.hpp | 538 inst/include/viennacl/circulant_matrix.hpp | 720 inst/include/viennacl/compressed_compressed_matrix.hpp | 1240 - inst/include/viennacl/compressed_matrix.hpp | 2410 +-- inst/include/viennacl/context.hpp | 178 inst/include/viennacl/coordinate_matrix.hpp | 1014 - inst/include/viennacl/detail/matrix_def.hpp | 542 inst/include/viennacl/detail/vector_def.hpp | 700 inst/include/viennacl/device_specific/builtin_database/common.hpp | 440 inst/include/viennacl/device_specific/builtin_database/devices/accelerator/fallback.hpp | 172 inst/include/viennacl/device_specific/builtin_database/devices/cpu/fallback.hpp | 170 inst/include/viennacl/device_specific/builtin_database/devices/gpu/amd/ev/cedar.hpp | 130 inst/include/viennacl/device_specific/builtin_database/devices/gpu/amd/ev/cypress.hpp | 132 inst/include/viennacl/device_specific/builtin_database/devices/gpu/amd/ni/barts.hpp | 130 inst/include/viennacl/device_specific/builtin_database/devices/gpu/amd/ni/devastator.hpp | 130 inst/include/viennacl/device_specific/builtin_database/devices/gpu/amd/ni/scrapper.hpp | 130 inst/include/viennacl/device_specific/builtin_database/devices/gpu/amd/si/tahiti.hpp | 170 inst/include/viennacl/device_specific/builtin_database/devices/gpu/amd/vi/hawaii.hpp | 170 inst/include/viennacl/device_specific/builtin_database/devices/gpu/fallback.hpp | 170 inst/include/viennacl/device_specific/builtin_database/devices/gpu/nv/f/ge_gt_540m.hpp | 120 inst/include/viennacl/device_specific/builtin_database/devices/gpu/nv/f/ge_gtx_470.hpp | 168 inst/include/viennacl/device_specific/builtin_database/devices/gpu/nv/f/ge_gtx_580.hpp | 170 inst/include/viennacl/device_specific/builtin_database/devices/gpu/nv/f/tesla_c2050.hpp | 170 inst/include/viennacl/device_specific/builtin_database/devices/gpu/nv/k/tesla_k20m.hpp | 170 inst/include/viennacl/device_specific/builtin_database/devices/gpu/nv/m/ge_gtx_750_ti.hpp | 172 inst/include/viennacl/device_specific/builtin_database/devices/gpu/nv/tesla/ge_gtx_260.hpp | 170 inst/include/viennacl/device_specific/builtin_database/matrix_product.hpp | 490 inst/include/viennacl/device_specific/execute.hpp | 112 inst/include/viennacl/device_specific/execution_handler.hpp | 206 inst/include/viennacl/device_specific/forwards.h | 590 inst/include/viennacl/device_specific/lazy_program_compiler.hpp | 150 inst/include/viennacl/device_specific/mapped_objects.hpp | 1026 - inst/include/viennacl/device_specific/templates/matrix_product_template.hpp | 1720 +- inst/include/viennacl/device_specific/templates/template_base.hpp | 1194 - inst/include/viennacl/device_specific/templates/utils.hpp | 212 inst/include/viennacl/device_specific/tree_parsing.hpp | 1026 - inst/include/viennacl/device_specific/utils.hpp | 1138 - inst/include/viennacl/ell_matrix.hpp | 726 inst/include/viennacl/fft.hpp | 566 inst/include/viennacl/forwards.h | 2066 +- inst/include/viennacl/hankel_matrix.hpp | 688 inst/include/viennacl/hyb_matrix.hpp | 886 - inst/include/viennacl/io/matrix_market.hpp | 882 - inst/include/viennacl/linalg/amg.hpp | 798 - inst/include/viennacl/linalg/amg_operations.hpp | 478 inst/include/viennacl/linalg/bicgstab.hpp | 1198 - inst/include/viennacl/linalg/bisect.hpp | 360 inst/include/viennacl/linalg/bisect_gpu.hpp | 348 inst/include/viennacl/linalg/cg.hpp | 882 - inst/include/viennacl/linalg/circulant_matrix_operations.hpp | 152 inst/include/viennacl/linalg/cuda/amg_operations.hpp | 1646 +- inst/include/viennacl/linalg/cuda/bisect_kernel_calls.hpp | 334 inst/include/viennacl/linalg/cuda/bisect_kernel_large.hpp | 1858 +- inst/include/viennacl/linalg/cuda/bisect_kernel_large_multi.hpp | 556 inst/include/viennacl/linalg/cuda/bisect_kernel_large_onei.hpp | 362 inst/include/viennacl/linalg/cuda/bisect_kernel_small.hpp | 524 inst/include/viennacl/linalg/cuda/bisect_util.hpp | 1228 - inst/include/viennacl/linalg/cuda/common.hpp | 502 inst/include/viennacl/linalg/cuda/direct_solve.hpp | 826 - inst/include/viennacl/linalg/cuda/fft_operations.hpp | 1718 +- inst/include/viennacl/linalg/cuda/ilu_operations.hpp | 1334 - inst/include/viennacl/linalg/cuda/iterative_operations.hpp | 4100 ++--- inst/include/viennacl/linalg/cuda/matrix_operations.hpp | 5452 +++--- inst/include/viennacl/linalg/cuda/matrix_operations_col.hpp | 3696 ++-- inst/include/viennacl/linalg/cuda/matrix_operations_prod.hpp | 5776 +++---- inst/include/viennacl/linalg/cuda/matrix_operations_row.hpp | 2938 +-- inst/include/viennacl/linalg/cuda/misc_operations.hpp | 184 inst/include/viennacl/linalg/cuda/nmf_operations.hpp | 306 inst/include/viennacl/linalg/cuda/scalar_operations.hpp | 752 inst/include/viennacl/linalg/cuda/sparse_matrix_operations.hpp | 5620 +++---- inst/include/viennacl/linalg/cuda/sparse_matrix_operations_solve.hpp | 1524 - inst/include/viennacl/linalg/cuda/spgemm.hpp | 1588 +- inst/include/viennacl/linalg/cuda/spgemm_rmerge.hpp | 1340 - inst/include/viennacl/linalg/cuda/vector_operations.hpp | 6506 ++++---- inst/include/viennacl/linalg/detail/amg/amg_base.hpp | 418 inst/include/viennacl/linalg/detail/bisect/bisect_kernel_calls.hpp | 384 inst/include/viennacl/linalg/detail/bisect/bisect_large.hpp | 286 inst/include/viennacl/linalg/detail/bisect/bisect_small.hpp | 194 inst/include/viennacl/linalg/detail/bisect/config.hpp | 88 inst/include/viennacl/linalg/detail/bisect/gerschgorin.hpp | 190 inst/include/viennacl/linalg/detail/bisect/structs.hpp | 366 inst/include/viennacl/linalg/detail/bisect/util.hpp | 214 inst/include/viennacl/linalg/detail/ilu/block_ilu.hpp | 1236 - inst/include/viennacl/linalg/detail/ilu/chow_patel_ilu.hpp | 634 inst/include/viennacl/linalg/detail/ilu/common.hpp | 528 inst/include/viennacl/linalg/detail/ilu/ilu0.hpp | 760 inst/include/viennacl/linalg/detail/ilu/ilut.hpp | 1196 - inst/include/viennacl/linalg/detail/op_applier.hpp | 208 inst/include/viennacl/linalg/detail/op_executor.hpp | 174 inst/include/viennacl/linalg/detail/spai/block_matrix.hpp | 174 inst/include/viennacl/linalg/detail/spai/block_vector.hpp | 156 inst/include/viennacl/linalg/detail/spai/fspai.hpp | 806 - inst/include/viennacl/linalg/detail/spai/qr.hpp | 996 - inst/include/viennacl/linalg/detail/spai/small_matrix.hpp | 228 inst/include/viennacl/linalg/detail/spai/spai-dynamic.hpp | 1376 - inst/include/viennacl/linalg/detail/spai/spai-static.hpp | 386 inst/include/viennacl/linalg/detail/spai/spai.hpp | 1666 +- inst/include/viennacl/linalg/detail/spai/spai_tag.hpp | 288 inst/include/viennacl/linalg/detail/spai/sparse_vector.hpp | 172 inst/include/viennacl/linalg/direct_solve.hpp | 1162 - inst/include/viennacl/linalg/eig.hpp | 58 inst/include/viennacl/linalg/fft_operations.hpp | 964 - inst/include/viennacl/linalg/gmres.hpp | 1478 - inst/include/viennacl/linalg/hankel_matrix_operations.hpp | 134 inst/include/viennacl/linalg/host_based/amg_operations.hpp | 2701 +-- inst/include/viennacl/linalg/host_based/common.hpp | 300 inst/include/viennacl/linalg/host_based/direct_solve.hpp | 616 inst/include/viennacl/linalg/host_based/fft_operations.hpp | 1714 +- inst/include/viennacl/linalg/host_based/ilu_operations.hpp | 1346 - inst/include/viennacl/linalg/host_based/iterative_operations.hpp | 1827 +- inst/include/viennacl/linalg/host_based/matrix_operations.hpp | 4106 ++--- inst/include/viennacl/linalg/host_based/misc_operations.hpp | 162 inst/include/viennacl/linalg/host_based/nmf_operations.hpp | 496 inst/include/viennacl/linalg/host_based/scalar_operations.hpp | 326 inst/include/viennacl/linalg/host_based/sparse_matrix_operations.hpp | 4208 ++--- inst/include/viennacl/linalg/host_based/spgemm_vector.hpp | 1412 - inst/include/viennacl/linalg/host_based/vector_operations.hpp | 2378 +- inst/include/viennacl/linalg/ichol.hpp | 458 inst/include/viennacl/linalg/ilu.hpp | 66 inst/include/viennacl/linalg/ilu_operations.hpp | 670 inst/include/viennacl/linalg/inner_prod.hpp | 374 inst/include/viennacl/linalg/iterative_operations.hpp | 852 - inst/include/viennacl/linalg/jacobi_precond.hpp | 284 inst/include/viennacl/linalg/lanczos.hpp | 1032 - inst/include/viennacl/linalg/lu.hpp | 456 inst/include/viennacl/linalg/matrix_operations.hpp | 2608 +-- inst/include/viennacl/linalg/maxmin.hpp | 306 inst/include/viennacl/linalg/misc_operations.hpp | 190 inst/include/viennacl/linalg/mixed_precision_cg.hpp | 400 inst/include/viennacl/linalg/nmf.hpp | 184 inst/include/viennacl/linalg/norm_1.hpp | 210 inst/include/viennacl/linalg/norm_2.hpp | 282 inst/include/viennacl/linalg/norm_frobenius.hpp | 148 inst/include/viennacl/linalg/norm_inf.hpp | 218 inst/include/viennacl/linalg/opencl/amg_operations.hpp | 918 - inst/include/viennacl/linalg/opencl/bisect_kernel_calls.hpp | 356 inst/include/viennacl/linalg/opencl/common.hpp | 206 inst/include/viennacl/linalg/opencl/direct_solve.hpp | 308 inst/include/viennacl/linalg/opencl/fft_operations.hpp | 702 inst/include/viennacl/linalg/opencl/ilu_operations.hpp | 522 inst/include/viennacl/linalg/opencl/iterative_operations.hpp | 1892 +- inst/include/viennacl/linalg/opencl/kernels/amg.hpp | 788 inst/include/viennacl/linalg/opencl/kernels/bisect.hpp | 5292 +++--- inst/include/viennacl/linalg/opencl/kernels/compressed_compressed_matrix.hpp | 222 inst/include/viennacl/linalg/opencl/kernels/compressed_matrix.hpp | 3408 ++-- inst/include/viennacl/linalg/opencl/kernels/coordinate_matrix.hpp | 812 - inst/include/viennacl/linalg/opencl/kernels/ell_matrix.hpp | 444 inst/include/viennacl/linalg/opencl/kernels/fft.hpp | 624 inst/include/viennacl/linalg/opencl/kernels/hyb_matrix.hpp | 482 inst/include/viennacl/linalg/opencl/kernels/ilu.hpp | 1012 - inst/include/viennacl/linalg/opencl/kernels/iterative.hpp | 3240 ++-- inst/include/viennacl/linalg/opencl/kernels/matrix.hpp | 2398 +-- inst/include/viennacl/linalg/opencl/kernels/matrix_element.hpp | 278 inst/include/viennacl/linalg/opencl/kernels/matrix_solve.hpp | 362 inst/include/viennacl/linalg/opencl/kernels/nmf.hpp | 200 inst/include/viennacl/linalg/opencl/kernels/scalar.hpp | 568 inst/include/viennacl/linalg/opencl/kernels/scan.hpp | 390 inst/include/viennacl/linalg/opencl/kernels/sliced_ell_matrix.hpp | 272 inst/include/viennacl/linalg/opencl/kernels/spai.hpp | 1264 - inst/include/viennacl/linalg/opencl/kernels/svd.hpp | 1408 - inst/include/viennacl/linalg/opencl/kernels/vector.hpp | 1736 +- inst/include/viennacl/linalg/opencl/kernels/vector_element.hpp | 328 inst/include/viennacl/linalg/opencl/matrix_operations.hpp | 2040 +- inst/include/viennacl/linalg/opencl/misc_operations.hpp | 140 inst/include/viennacl/linalg/opencl/nmf_operations.hpp | 280 inst/include/viennacl/linalg/opencl/scalar_operations.hpp | 412 inst/include/viennacl/linalg/opencl/sparse_matrix_operations.hpp | 2490 +-- inst/include/viennacl/linalg/opencl/vandermonde_matrix_operations.hpp | 138 inst/include/viennacl/linalg/opencl/vector_operations.hpp | 2528 +-- inst/include/viennacl/linalg/power_iter.hpp | 260 inst/include/viennacl/linalg/prod.hpp | 742 inst/include/viennacl/linalg/qr-method-common.hpp | 378 inst/include/viennacl/linalg/qr-method.hpp | 1668 +- inst/include/viennacl/linalg/qr.hpp | 1340 - inst/include/viennacl/linalg/row_scaling.hpp | 410 inst/include/viennacl/linalg/scalar_operations.hpp | 486 inst/include/viennacl/linalg/spai.hpp | 586 inst/include/viennacl/linalg/sparse_matrix_operations.hpp | 844 - inst/include/viennacl/linalg/sum.hpp | 274 inst/include/viennacl/linalg/svd.hpp | 1068 - inst/include/viennacl/linalg/toeplitz_matrix_operations.hpp | 158 inst/include/viennacl/linalg/tql2.hpp | 526 inst/include/viennacl/linalg/vandermonde_matrix_operations.hpp | 144 inst/include/viennacl/linalg/vector_operations.hpp | 2610 +-- inst/include/viennacl/matrix.hpp | 7938 +++++----- inst/include/viennacl/matrix_proxy.hpp | 1192 - inst/include/viennacl/meta/enable_if.hpp | 88 inst/include/viennacl/meta/predicate.hpp | 1070 - inst/include/viennacl/meta/result_of.hpp | 1264 - inst/include/viennacl/meta/tag_of.hpp | 782 inst/include/viennacl/misc/bandwidth_reduction.hpp | 78 inst/include/viennacl/misc/cuthill_mckee.hpp | 1224 - inst/include/viennacl/misc/gibbs_poole_stockmeyer.hpp | 855 - inst/include/viennacl/ocl/backend.hpp | 730 inst/include/viennacl/ocl/command_queue.hpp | 186 inst/include/viennacl/ocl/context.hpp | 1654 +- inst/include/viennacl/ocl/device.hpp | 2994 +-- inst/include/viennacl/ocl/device_utils.hpp | 384 inst/include/viennacl/ocl/enqueue.hpp | 298 inst/include/viennacl/ocl/error.hpp | 1376 - inst/include/viennacl/ocl/forwards.h | 128 inst/include/viennacl/ocl/handle.hpp | 458 inst/include/viennacl/ocl/kernel.hpp | 1612 +- inst/include/viennacl/ocl/local_mem.hpp | 104 inst/include/viennacl/ocl/platform.hpp | 292 inst/include/viennacl/ocl/program.hpp | 174 inst/include/viennacl/ocl/utils.hpp | 172 inst/include/viennacl/range.hpp | 154 inst/include/viennacl/scalar.hpp | 1750 +- inst/include/viennacl/scheduler/execute.hpp | 582 inst/include/viennacl/scheduler/execute_axbx.hpp | 764 inst/include/viennacl/scheduler/execute_elementwise.hpp | 822 - inst/include/viennacl/scheduler/execute_generic_dispatcher.hpp | 270 inst/include/viennacl/scheduler/execute_matrix_dispatcher.hpp | 372 inst/include/viennacl/scheduler/execute_matrix_prod.hpp | 814 - inst/include/viennacl/scheduler/execute_scalar_assign.hpp | 386 inst/include/viennacl/scheduler/execute_scalar_dispatcher.hpp | 264 inst/include/viennacl/scheduler/execute_util.hpp | 650 inst/include/viennacl/scheduler/execute_vector_dispatcher.hpp | 402 inst/include/viennacl/scheduler/forwards.h | 1662 +- inst/include/viennacl/scheduler/io.hpp | 538 inst/include/viennacl/scheduler/preset.hpp | 212 inst/include/viennacl/slice.hpp | 156 inst/include/viennacl/sliced_ell_matrix.hpp | 768 inst/include/viennacl/toeplitz_matrix.hpp | 770 inst/include/viennacl/tools/adapter.hpp | 844 - inst/include/viennacl/tools/entry_proxy.hpp | 470 inst/include/viennacl/tools/matrix_generation.hpp | 294 inst/include/viennacl/tools/matrix_size_deducer.hpp | 410 inst/include/viennacl/tools/random.hpp | 170 inst/include/viennacl/tools/sha1.hpp | 476 inst/include/viennacl/tools/shared_ptr.hpp | 360 inst/include/viennacl/tools/timer.hpp | 250 inst/include/viennacl/tools/tools.hpp | 632 inst/include/viennacl/traits/clear.hpp | 126 inst/include/viennacl/traits/context.hpp | 132 inst/include/viennacl/traits/fill.hpp | 138 inst/include/viennacl/traits/handle.hpp | 542 inst/include/viennacl/traits/row_major.hpp | 102 inst/include/viennacl/traits/size.hpp | 886 - inst/include/viennacl/traits/start.hpp | 206 inst/include/viennacl/traits/stride.hpp | 146 inst/include/viennacl/vandermonde_matrix.hpp | 686 inst/include/viennacl/vector.hpp | 6472 ++++---- inst/include/viennacl/vector_proxy.hpp | 682 inst/include/viennacl/version.hpp | 62 man/RViennaCL-package.Rd | 88 258 files changed, 115416 insertions(+), 114787 deletions(-)
Title: Integrate R with 'RDocumentation.org'
Description: Wraps around the default help functionality in R. Instead of plain documentation files, documentation will now show up as it does on 'RDocumentation.org', a platform that shows R documentation from CRAN, GitHub and Bioconductor, together with informative stats to assess the package quality and possibilities to discuss packages.
Author: Ludovic Vannoorenberghe [cre],
Jonathan Cornelissen [aut],
Hannes Buseyne [ctb],
Filip Schouwenaars [ctb]
Maintainer: Ludovic Vannoorenberghe <ludovic@datacamp.com>
Diff between RDocumentation versions 0.7.1 dated 2016-10-26 and 0.8.0 dated 2016-11-24
RDocumentation-0.7.1/RDocumentation/R/defaults.R |only RDocumentation-0.7.1/RDocumentation/man/view_help.Rd |only RDocumentation-0.8.0/RDocumentation/DESCRIPTION | 6 RDocumentation-0.8.0/RDocumentation/MD5 | 28 +- RDocumentation-0.8.0/RDocumentation/NAMESPACE | 5 RDocumentation-0.8.0/RDocumentation/NEWS.md | 4 RDocumentation-0.8.0/RDocumentation/R/overrides.R | 106 +++------- RDocumentation-0.8.0/RDocumentation/R/rdocs_active.R |only RDocumentation-0.8.0/RDocumentation/R/settings.R |only RDocumentation-0.8.0/RDocumentation/R/utils.R | 50 ++++ RDocumentation-0.8.0/RDocumentation/R/view_help.R | 49 +++- RDocumentation-0.8.0/RDocumentation/R/zzz.R | 9 RDocumentation-0.8.0/RDocumentation/README.md | 19 + RDocumentation-0.8.0/RDocumentation/man/defaults.Rd | 25 +- RDocumentation-0.8.0/RDocumentation/tests/testthat/test-defaults.R | 25 +- RDocumentation-0.8.0/RDocumentation/tests/testthat/test-help.R | 39 ++- RDocumentation-0.8.0/RDocumentation/tests/testthat/test-view-help.R | 3 17 files changed, 223 insertions(+), 145 deletions(-)
More information about RDocumentation at CRAN
Permanent link
Title: Tracking the Progress of Mc*pply with Progress Bar
Description: A light-weight package helps you track and visualize
the progress of parallel version of vectorized R functions (mc*apply).
The package works on *nix (Linux, Unix such as macOS) system only due to
the lack of fork() functionality, which is essential for mc*apply, on Windows.
Author: Kevin Kuang
Maintainer: Kevin kuang <kvn.kuang@mail.utoronto.ca>
Diff between pbmcapply versions 1.1.1 dated 2016-09-10 and 1.1.2 dated 2016-11-24
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- R/pbmclapply.R | 2 +- R/pbmcmapply.R | 2 +- man/pbmclapply.Rd | 2 +- 5 files changed, 11 insertions(+), 11 deletions(-)
Title: Estimation of Multivariate Long-Memory Models Parameters
Description: Computation of an estimation of the long-memory parameters and
the long-run covariance matrix using a multivariate model
(Lobato (1999) <doi:10.1016/S0304-4076(98)00038-4>; Shimotsu (2007) <doi:10.1016/j.jeconom.2006.01.003>). Two semi-parametric methods are
implemented: a Fourier based approach (Shimotsu (2007) <doi:10.1016/j.jeconom.2006.01.003>) and a wavelet based
approach (Achard and Gannaz (2016) <doi:10.1111/jtsa.12170>).
Author: Sophie Achard [aut, cre],
Irene Gannaz [aut]
Maintainer: Sophie Achard <sophie.achard@gipsa-lab.fr>
Diff between multiwave versions 1.1 dated 2016-10-15 and 1.2 dated 2016-11-24
DESCRIPTION | 14 +++++++------- MD5 | 20 +++++++++++--------- R/mww_cov_eval.R | 2 +- R/psi_hat_exact.R | 2 +- data |only man/K_eval.Rd | 2 +- man/brainHCP.Rd |only man/mww_wav.Rd | 2 +- man/mww_wav_cov_eval.Rd | 2 +- man/psi_hat_exact.Rd | 4 ++-- man/varma.Rd | 2 +- man/vfracdiff.Rd | 6 +++--- 12 files changed, 29 insertions(+), 27 deletions(-)
Title: Extra Themes, Scales and Geoms for 'ggplot2'
Description: Some extra themes, geoms, and scales for 'ggplot2'.
Provides 'ggplot2' themes and scales that replicate the look of plots
by Edward Tufte, Stephen Few, 'Fivethirtyeight', 'The Economist', 'Stata',
'Excel', and 'The Wall Street Journal', among others.
Provides 'geoms' for Tufte's box plot and range frame.
Author: Jeffrey B. Arnold [aut, cre],
Gergely Daroczi [ctb],
Bo Werth [ctb],
Brian Weitzner [ctb],
Joshua Kunst [ctb],
Baptise Auguie [ctb],
Bob Rudis [ctb],
Hadley Wickham [ctb, cph] (Code from the ggplot2 package.),
Justin Talbot [ctb] (Code from the labeling package),
Joshua London [ctb]
Maintainer: Jeffrey B. Arnold <jeffrey.arnold@gmail.com>
Diff between ggthemes versions 3.2.0 dated 2016-07-11 and 3.3.0 dated 2016-11-24
DESCRIPTION | 8 +- MD5 | 24 ++++---- NEWS | 7 ++ R/base.R | 8 +- R/economist.R | 4 - R/geom-rangeframe.R | 131 ++++++++++++++++++++++++----------------------- R/geom-tufteboxplot.R | 2 R/stata.R | 4 - R/theme-map.R | 2 build/vignette.rds |binary inst/doc/ggthemes.html | 68 ++++++++++++------------ man/geom_rangeframe.Rd | 18 +++--- man/geom_tufteboxplot.Rd | 6 +- 13 files changed, 149 insertions(+), 133 deletions(-)
Title: Functional Rarity Indices Computation
Description: Computes functional rarity indices as proposed by Violle et al (accepted).
Various indices can be computed using both regional and local information.
Functional Rarity combines both the functional aspect of rarity as well as
the extent aspect of rarity.
Author: Matthias Grenié [aut, cre],
Pierre Denelle [aut],
Caroline Tucker [aut]
Maintainer: Matthias Grenié <matthias.grenie@gmail.com>
Diff between funrar versions 1.0.1 dated 2016-09-27 and 1.0.2 dated 2016-11-24
DESCRIPTION | 6 +++--- MD5 | 17 +++++++++++------ NAMESPACE | 2 ++ NEWS.md |only R/make_relative.R |only README.md | 3 +++ build/vignette.rds |binary inst/doc/rarity_indices.html | 12 ++++++------ inst/doc/sparse_matrices.html | 40 ++++++++++++++++++++-------------------- man/make_absolute.Rd |only man/make_relative.Rd |only tests/testthat/test-rel_abund.R |only 12 files changed, 45 insertions(+), 35 deletions(-)
Title: Transcriptomic Dynamics Models in Field Conditions
Description: Provides functionality for constructing
statistical models of transcriptomic dynamics in field conditions.
It further offers the function to predict expression of a gene given
the attributes of samples and meteorological data.
Author: Koji Iwayama [cre],
Yuri Aisaka [aut]
Maintainer: Koji Iwayama <fieldtranscriptome@gmail.com>
Diff between FIT versions 0.0.2 dated 2016-11-22 and 0.0.3 dated 2016-11-24
DESCRIPTION | 6 MD5 | 22 R/FIT.R | 4 R/Train.R | 1 inst/doc/FIT.R | 8 inst/doc/FIT.Rmd | 8 inst/doc/FIT.html |55193 -------------------------------------- inst/extdata/prediction.attribute | 185 inst/extdata/train.attribute | 681 man/FIT.Rd | 4 src/prep.h | 2 vignettes/FIT.Rmd | 8 12 files changed, 682 insertions(+), 55440 deletions(-)
Title: A Modern and Flexible Web Client for R
Description: The curl() and curl_download() functions provide highly
configurable drop-in replacements for base url() and download.file() with
better performance, support for encryption (https, ftps), gzip compression,
authentication, and other 'libcurl' goodies. The core of the package implements a
framework for performing fully customized requests where data can be processed
either in memory, on disk, or streaming via the callback or connection
interfaces. Some knowledge of 'libcurl' is recommended; for a more-user-friendly
web client see the 'httr' package which builds on this package with http
specific tools and logic.
Author: Jeroen Ooms [cre, aut],
Hadley Wickham [ctb],
RStudio [cph]
Maintainer: Jeroen Ooms <jeroen.ooms@stat.ucla.edu>
Diff between curl versions 2.2 dated 2016-10-21 and 2.3 dated 2016-11-24
DESCRIPTION | 6 - MD5 | 51 ++++++++-------- NEWS | 8 ++ R/curl.R | 7 ++ R/download.R | 2 R/fetch.R | 13 ++-- R/handle.R | 2 build/vignette.rds |binary inst/doc/intro.R | 67 ++++++++++++--------- inst/doc/intro.Rmd | 48 ++++++++++----- inst/doc/intro.html | 119 ++++++++++++++++++++++---------------- man/curl.Rd | 8 ++ man/curl_fetch.Rd | 4 - man/curl_options.Rd | 2 man/handle.Rd | 10 +-- man/ie_proxy.Rd | 2 man/multi.Rd | 4 - man/nslookup.Rd | 2 src/Makevars.win | 4 - src/curl.c | 11 ++- src/init.c | 4 + src/interrupt.c | 9 +- tests/testthat/helper-version.R | 34 ++++++++-- tests/testthat/test-handle.R | 11 +++ tests/testthat/test-nonblocking.R |only tools/winlibs.R | 6 - vignettes/intro.Rmd | 48 ++++++++++----- 27 files changed, 312 insertions(+), 170 deletions(-)
Title: Analyze Fuzzy Time Series
Description: Analyze fuzzy time series by Chen, Singh, Heuristic and Chen-Hsu models. The Abbasov-Mamedova and NFTS models is included as well.
Author: Tran Thi Ngoc Han, Doan Hai Nghi, Mai Thi Hong Diem, Nguyen Thi Diem My, Hong Viet Minh, Vo Van Tai, Pham Minh Truc.
Maintainer: Hong Viet Minh <hongvietminh@gmail.com>
Diff between AnalyzeTS versions 2.1 dated 2016-09-11 and 2.2 dated 2016-11-24
DESCRIPTION | 16 +- MD5 | 76 ++++++---- NAMESPACE | 4 R/CMA.R | 4 R/ChenHsu.bin.R | 13 + R/Compare.Cs.R | 125 ++++++++++++++++- R/DOC.R | 87 +++++++++++- R/Descriptives.R | 25 +-- R/Fitted.arima.R |only R/Frequencies.R | 66 ++++----- R/GChenHsu.bin.R |only R/GDOC.R |only R/Gfuzzy.ts1.R |only R/Gfuzzy.ts2.R |only R/Greg.ts.R |only R/PrintAIC.R | 7 R/av.res.R | 11 + R/forecast.Greg.ts.R |only R/forecastGARCH.R | 12 - R/fuzzy.ts1.R | 337 ++++++++++++++++++++++++++---------------------- R/fuzzy.ts2.R | 187 +++++++++++++------------- R/pmax.R |only R/round2str.R |only build/partial.rdb |binary man/CMA.Rd | 4 man/ChenHsu.bin.Rd | 16 +- man/Compare.Cs.Rd | 21 +- man/DOC.Rd | 48 +++--- man/Descriptives.Rd | 4 man/Dgroup.Rd | 2 man/Fitted.arima.Rd |only man/Frequencies.Rd | 17 -- man/GChenHsu.bin.Rd |only man/GDOC.Rd |only man/Gfuzzy.ts1.Rd |only man/Gfuzzy.ts2.Rd |only man/Greg.ts.Rd |only man/PrintAIC.Rd | 29 ++-- man/SES.Rd | 6 man/av.res.Rd | 90 ++++++++---- man/enrollment.Rd | 1 man/forecast.Greg.ts.Rd |only man/forecastGARCH.Rd | 4 man/fuzzy.ts1.Rd | 58 ++++---- man/fuzzy.ts2.Rd | 86 +++++++----- man/grid.on.Rd | 2 man/pmax.Rd |only man/round2str.Rd |only 48 files changed, 846 insertions(+), 512 deletions(-)
Title: Repulsive Text and Label Geoms for 'ggplot2'
Description:
Provides text and label geoms for 'ggplot2' that help to avoid overlapping
text labels. Labels repel away from each other and away from the data
points.
Author: Kamil Slowikowski [aut, cre],
Jean-Olivier Irisson [ctb]
Maintainer: Kamil Slowikowski <kslowikowski@gmail.com>
Diff between ggrepel versions 0.6.3 dated 2016-10-20 and 0.6.5 dated 2016-11-24
ggrepel-0.6.3/ggrepel/NEWS |only ggrepel-0.6.3/ggrepel/vignettes/figures/ggrepel/geom_label_repel-1.png |only ggrepel-0.6.3/ggrepel/vignettes/figures/ggrepel/geom_text-1.png |only ggrepel-0.6.3/ggrepel/vignettes/figures/ggrepel/geom_text_repel-1.png |only ggrepel-0.6.3/ggrepel/vignettes/figures/ggrepel/geom_text_repel_empty_string-1.png |only ggrepel-0.6.3/ggrepel/vignettes/figures/ggrepel/geom_text_repel_options-1.png |only ggrepel-0.6.3/ggrepel/vignettes/figures/ggrepel/geom_text_repel_point_padding_na-1.png |only ggrepel-0.6.3/ggrepel/vignettes/figures/ggrepel/line_plot-1.png |only ggrepel-0.6.3/ggrepel/vignettes/genes.txt.bz2 |only ggrepel-0.6.5/ggrepel/DESCRIPTION | 19 +-- ggrepel-0.6.5/ggrepel/LICENSE |only ggrepel-0.6.5/ggrepel/MD5 | 36 ++--- ggrepel-0.6.5/ggrepel/NEWS.md |only ggrepel-0.6.5/ggrepel/R/geom-label-repel.R | 31 ++--- ggrepel-0.6.5/ggrepel/R/geom-text-repel.R | 50 ++++---- ggrepel-0.6.5/ggrepel/R/utilities.R |only ggrepel-0.6.5/ggrepel/build/vignette.rds |binary ggrepel-0.6.5/ggrepel/inst/doc/ggrepel.R | 2 ggrepel-0.6.5/ggrepel/inst/doc/ggrepel.Rmd | 32 ++++- ggrepel-0.6.5/ggrepel/inst/doc/ggrepel.html | 61 ++++++---- ggrepel-0.6.5/ggrepel/man/geom_text_repel.Rd | 34 ++--- ggrepel-0.6.5/ggrepel/vignettes/Makefile | 4 ggrepel-0.6.5/ggrepel/vignettes/figures/ggrepel/volcano-1.png |binary ggrepel-0.6.5/ggrepel/vignettes/ggrepel.Rmd | 32 ++++- ggrepel-0.6.5/ggrepel/vignettes/ggrepel.md | 50 ++++++-- 25 files changed, 228 insertions(+), 123 deletions(-)