Title: A Colour Picker Tool for Shiny and for Selecting Colours in
Plots
Description: A colour picker that can be used as an input in Shiny apps
or 'Rmarkdown' documents. A Plot Colour Helper tool is available as an
'RStudio' addin, which helps you pick colours to use in your plots. A more
generic Colour Picker 'RStudio' addin is also provided to let you select
colours for use in your R code.
Author: Dean Attali [aut, cre]
Maintainer: Dean Attali <daattali@gmail.com>
Diff between colourpicker versions 0.2 dated 2016-09-07 and 0.3 dated 2016-12-05
colourpicker-0.2/colourpicker/inst/doc/overview.R |only colourpicker-0.2/colourpicker/inst/doc/overview.Rmd |only colourpicker-0.2/colourpicker/inst/doc/overview.html |only colourpicker-0.2/colourpicker/vignettes/overview.Rmd |only colourpicker-0.3/colourpicker/DESCRIPTION | 21 - colourpicker-0.3/colourpicker/MD5 | 35 + colourpicker-0.3/colourpicker/NAMESPACE | 1 colourpicker-0.3/colourpicker/NEWS.md | 14 colourpicker-0.3/colourpicker/R/colourInput.R | 8 colourpicker-0.3/colourpicker/R/colourPickerGadget.R | 158 ++++++- colourpicker-0.3/colourpicker/R/plotHelper.R |only colourpicker-0.3/colourpicker/README.md | 199 ++++++++-- colourpicker-0.3/colourpicker/build/vignette.rds |binary colourpicker-0.3/colourpicker/inst/doc/colourpicker.R |only colourpicker-0.3/colourpicker/inst/doc/colourpicker.Rmd |only colourpicker-0.3/colourpicker/inst/doc/colourpicker.html |only colourpicker-0.3/colourpicker/inst/gadgets/colourpicker/css/app.css | 26 + colourpicker-0.3/colourpicker/inst/gadgets/colourpicker/css/plotHelper.css |only colourpicker-0.3/colourpicker/inst/gadgets/colourpicker/js/shinyjs-funcs.js | 54 ++ colourpicker-0.3/colourpicker/inst/img/plothelper-demo.gif |only colourpicker-0.3/colourpicker/inst/img/plothelper-demo.png |only colourpicker-0.3/colourpicker/inst/rstudio/addins.dcf | 5 colourpicker-0.3/colourpicker/man/colourPicker.Rd | 10 colourpicker-0.3/colourpicker/man/plotHelper.Rd |only colourpicker-0.3/colourpicker/vignettes/colourpicker.Rmd |only 25 files changed, 442 insertions(+), 89 deletions(-)
Title: Structural Equation Modelling in R with 'OpenMx'
Description: Create, run, and report structural equation and twin models quickly.
If you're just starting out, try typing '?umx'.
Author: Timothy C Bates [aut, cre]
Maintainer: Timothy C Bates <timothy.c.bates@gmail.com>
Diff between umx versions 1.4.5 dated 2016-11-08 and 1.4.9 dated 2016-12-05
DESCRIPTION | 8 +-- MD5 | 80 +++++++++++++++++++-------------------- NEWS | 6 ++ R/build_run_modify.r | 44 ++++++++++----------- R/misc_and_utility.r | 67 ++++++++++++++++---------------- man/loadings.MxModel.Rd | 9 ++-- man/mxSE.Rd | 9 ++-- man/umx.Rd | 11 ++--- man/umxACE.Rd | 2 man/umxACESexLim.Rd | 2 man/umxACEcov.Rd | 2 man/umxAPA.Rd | 9 ++-- man/umxAdd1.Rd | 3 - man/umxCP.Rd | 2 man/umxDrop1.Rd | 5 -- man/umxEquate.Rd | 5 -- man/umxFixAll.Rd | 5 -- man/umxGetParameters.Rd | 12 ++--- man/umxGxE.Rd | 2 man/umxIP.Rd | 2 man/umxLabel.Rd | 2 man/umxLatent.Rd | 2 man/umxMI.Rd | 3 - man/umxMatrix.Rd | 2 man/umxModify.Rd | 2 man/umxPath.Rd | 2 man/umxRAM.Rd | 2 man/umxRAM2Ordinal.Rd | 2 man/umxRun.Rd | 2 man/umxSetParameters.Rd | 5 -- man/umxSummary.Rd | 1 man/umxThresholdMatrix.Rd | 2 man/umxUnexplainedCausalNexus.Rd | 5 -- man/umxValues.Rd | 2 man/umx_APA_pval.Rd | 7 +-- man/umx_aggregate.Rd | 7 +-- man/umx_make_TwinData.Rd | 19 +++++---- man/umx_make_fake_data.Rd | 22 ++++------ man/umx_print.Rd | 7 +-- man/umx_show.Rd | 7 +-- man/umx_time.Rd | 7 +-- 41 files changed, 202 insertions(+), 193 deletions(-)
Title: Phylogenetic Tools for Comparative Biology (and Other Things)
Description: Package contains various functions for phylogenetic analysis.
This functionality is concentrated in the phylogenetic analysis of
comparative data from species. For example, the package includes
functions for Bayesian and ML ancestral state estimation; visual
simulation of trait evolution; fitting models of trait evolution
with multiple Brownian rates and correlations; visualizing
discrete and continuous character evolution using colors or
projections into trait space; identifying the location of a change
in the rate of character evolution on the tree; fast Brownian motion
simulation and simulation under several other models of
continuous trait evolution; fitting a model of correlated binary
trait evolution; locating the position of a fossil or an recently
extinct lineage on a tree using continuous character data with ML;
plotting lineage accumulation through time, including across
multiple trees (such as a Bayesian posterior sample); conducting
an analysis called stochastic character mapping, in which character
histories for a discrete trait are sampled from their posterior
probability distribution under a model; conducting a multiple
(i.e., partial) Mantel test; fitting a phylogenetic regression model
with error in predictor and response variables; conducting a
phylogenetic principal components analysis, a phylogenetic
regression, a reduced major axis regression, a phylogenetic
canonical correlation analysis, and a phylogenetic ANOVA; projecting
a tree onto a geographic map; simulating discrete character
histories on the tree; fitting a model in which a discrete character
evolves under the threshold model; visualization of cospeciation; a
simple statistical test for cospeciation between two trees. In
addition to this phylogenetic comparative method functionality, the
package also contains functions for a wide range of other purposes in
phylogenetic biology. For instance, functionality in this package
includes (but is not restricted to): adding taxa to a tree
(including randomly, everywhere, or automatically to genera);
generating all bi- and multi-furcating trees for a set of taxa;
reducing a phylogeny to its backbone tree; dropping tips or adding
tips to special types of phylogenetic trees; exporting a tree as an
XML file; converting a tree with a mapped character to a tree with
singleton nodes and one character state per edge; estimating a
phylogeny using the least squares method; simulating birth-death
trees under a range of conditions; rerooting trees; computing a
consensus tree under multiple methods, including via minimization
of the distance to other trees in the set; a wide range of
visualizations of trees; and a variety of other manipulations and
analyses that phylogenetic biologists may find useful for their
research.
Author: Liam J. Revell
Maintainer: Liam J. Revell <liam.revell@umb.edu>
Diff between phytools versions 0.5-38 dated 2016-06-24 and 0.5-64 dated 2016-12-05
DESCRIPTION | 35 +++--- MD5 | 55 +++++----- NAMESPACE | 48 ++++++-- R/anc.ML.R | 54 ++++++++- R/backbonePhylo.R | 87 ++++++++++++--- R/collapseTree.R | 38 +++--- R/cophylo.R | 251 +++++++++++++++++++++++++++++++++++++++++----- R/cospeciation.R |only R/fancyTree.R | 65 ++++++++++- R/fitMk.R | 23 +++- R/make.simmap.R | 127 ++++++++++++++++++++++- R/phyl.pca.R | 88 +++++++++------- R/phylo.to.map.R | 18 ++- R/plotBranchbyTrait.R | 51 +++++++-- R/plotSimmap.R | 50 ++++++--- R/plotTree.wBars.R | 91 ++++++++++++++++ R/rateshift.R | 34 ++++++ R/resolveNodes.R |only R/utilities.R | 154 +++++++++++++++++++++++++--- man/aic.w.Rd |only man/bd.Rd |only man/cophylo.Rd | 2 man/cospeciation.Rd |only man/di2multi.simmap.Rd | 6 - man/minRotate.Rd | 2 man/modified.Grafen.Rd |only man/plot.backbonePhylo.Rd | 7 - man/plotSimmap.Rd | 4 man/plotTree.wBars.Rd | 21 ++- man/rateshift.Rd | 12 +- man/resolveNode.Rd |only man/rotateNodes.Rd | 15 ++ 32 files changed, 1093 insertions(+), 245 deletions(-)
Title: Procrustes Application to Cophylogenetic Analysis
Description: Procrustes analyses to infer co-phylogenetic
matching between pairs of (ultrametric) phylogenetic trees.
Author: Juan Antonio Balbuena <j.a.balbuena@uv.es>, Timothee Poisot
<tim@poisotlab.io>, Matthew Hutchinson <matthewhutchinson15@gmail.com>,
Fernando Cagua <fernando@cagua.co>
Maintainer: Matthew Hutchinson <matthewhutchinson15@gmail.com>
Diff between paco versions 0.3.0 dated 2016-10-03 and 0.3.1 dated 2016-12-05
DESCRIPTION | 10 +++++----- MD5 | 4 ++-- R/coordpcoa.r | 24 ++++++++++++------------ 3 files changed, 19 insertions(+), 19 deletions(-)
Title: Nucleome Imaging Toolbox
Description: Tools for 4D nucleome imaging. Quantitative analysis of the 3D nuclear landscape recorded with super-resolved fluorescence microscopy.
Author: Volker Schmid [aut, cre]
Maintainer: Volker Schmid <stats@volkerschmid.de>
Diff between nucim versions 0.5.3 dated 2016-10-15 and 1.0.0 dated 2016-12-05
nucim-0.5.3/nucim/R/extract_spots.R |only nucim-0.5.3/nucim/R/extract_spots_DHS.R |only nucim-0.5.3/nucim/man/extract.spots.DHS.Rd |only nucim-0.5.3/nucim/man/extract.spots.Rd |only nucim-1.0.0/nucim/DESCRIPTION | 26 - nucim-1.0.0/nucim/MD5 | 88 ++-- nucim-1.0.0/nucim/NAMESPACE | 65 +-- nucim-1.0.0/nucim/NEWS |only nucim-1.0.0/nucim/R/barplot_with_ci.R |only nucim-1.0.0/nucim/R/class_neighbours.R | 142 +++--- nucim-1.0.0/nucim/R/classes.R | 200 ++++----- nucim-1.0.0/nucim/R/colorsinclasses.R |only nucim-1.0.0/nucim/R/compute_distance2border.R | 280 ++++++------- nucim-1.0.0/nucim/R/dapimask.R | 195 ++++----- nucim-1.0.0/nucim/R/dapimask_file.R | 57 +- nucim-1.0.0/nucim/R/dapimask_folder.R | 53 +- nucim-1.0.0/nucim/R/find_spots.R | 178 ++++---- nucim-1.0.0/nucim/R/heatmap7.R |only nucim-1.0.0/nucim/R/nearest_class_folder.R |only nucim-1.0.0/nucim/R/onattach.R | 11 nucim-1.0.0/nucim/R/plot_classify_folder.R |only nucim-1.0.0/nucim/R/plot_colors_in_classes.R |only nucim-1.0.0/nucim/R/plot_nearest_class_folder.R |only nucim-1.0.0/nucim/R/splitchannel.R | 102 ++-- nucim-1.0.0/nucim/R/splitchannels.R | 256 ++++++----- nucim-1.0.0/nucim/R/spots_combined.R |only nucim-1.0.0/nucim/R/t_colors_in_classes_folder.R |only nucim-1.0.0/nucim/R/utils.R |only nucim-1.0.0/nucim/README.md |only nucim-1.0.0/nucim/build |only nucim-1.0.0/nucim/inst |only nucim-1.0.0/nucim/man/barplot_with_interval.Rd |only nucim-1.0.0/nucim/man/barplot_with_interval_23.Rd |only nucim-1.0.0/nucim/man/class.neighbours.Rd | 48 +- nucim-1.0.0/nucim/man/class.neighbours.folder.Rd | 46 +- nucim-1.0.0/nucim/man/classify.Rd | 54 +- nucim-1.0.0/nucim/man/classify.folder.Rd | 52 +- nucim-1.0.0/nucim/man/classify.single.Rd |only nucim-1.0.0/nucim/man/classify.table.Rd | 40 - nucim-1.0.0/nucim/man/colors.in.classes.Rd |only nucim-1.0.0/nucim/man/colors.in.classes.folder.Rd |only nucim-1.0.0/nucim/man/compute.distance2border.Rd | 58 +- nucim-1.0.0/nucim/man/dapimask.Rd | 53 +- nucim-1.0.0/nucim/man/dapimask.file.Rd | 56 +- nucim-1.0.0/nucim/man/dapimask.folder.Rd | 54 +- nucim-1.0.0/nucim/man/find.spots.file.Rd | 66 +-- nucim-1.0.0/nucim/man/find.spots.folder.Rd | 58 +- nucim-1.0.0/nucim/man/heatmap.color.Rd |only nucim-1.0.0/nucim/man/heatmap7.Rd |only nucim-1.0.0/nucim/man/nearestClassDistances.folder.Rd |only nucim-1.0.0/nucim/man/plot_classify.folder.Rd |only nucim-1.0.0/nucim/man/plot_colors.in.classes.folder.Rd |only nucim-1.0.0/nucim/man/plot_nearestClassDistances.folder.Rd |only nucim-1.0.0/nucim/man/splitchannel.Rd | 40 - nucim-1.0.0/nucim/man/splitchannels.Rd |only nucim-1.0.0/nucim/man/splitchannels.file.Rd | 46 +- nucim-1.0.0/nucim/man/splitchannels.folder.Rd | 58 +- nucim-1.0.0/nucim/man/spots.combined.Rd |only nucim-1.0.0/nucim/man/spots.combined.file.Rd |only nucim-1.0.0/nucim/man/spots.combined.folder.Rd |only nucim-1.0.0/nucim/man/t_colors.in.classes.folder.Rd |only nucim-1.0.0/nucim/vignettes |only 62 files changed, 1237 insertions(+), 1145 deletions(-)
Title: Multicollinearity Diagnostic Measures
Description: Package computes popular and widely used multicollinearity diagnostic measures. Package also indicates which regressors may be the reason of collinearity among regressors.
Author: Muhammad Imdadullah and Dr. Muhammad Aslam
Maintainer: Muhammad Imdadullah <mimdadasad@gmail.com>
Diff between mctest versions 1.0 dated 2016-06-29 and 1.1 dated 2016-12-05
DESCRIPTION | 11 ++++---- MD5 | 18 +++++++------ R/imcdiag.R | 63 ++++++++++++++++++++++++++++++++++++------------ R/mcdiag.R | 14 +++++----- R/omcdiag.R | 4 +-- inst |only man/imcdiag.Rd | 65 ++++++++++++++++++++++++++++++-------------------- man/mc.plot.Rd | 29 +++++++++++----------- man/mctest-package.Rd |only man/mctest.Rd | 56 ++++++++++++++++++++++++------------------- man/omcdiag.Rd | 46 +++++++++++++++++++---------------- 11 files changed, 184 insertions(+), 122 deletions(-)
Title: Matrix-Based Partial Least Squares Estimation
Description: Partial Least Squares Path Modeling
algorithm and related algorithms. The algorithm implementations aim for
computational efficiency using matrix algebra and covariance data. The
package is designed toward Monte Carlo simulations and includes functions
to perform simple Monte Carlo simulations.
Author: Mikko Rönkkö [aut, cre]
Maintainer: Mikko Rönkkö <mikko.ronkko@aalto.fi>
Diff between matrixpls versions 1.0.1 dated 2016-06-18 and 1.0.2 dated 2016-12-05
DESCRIPTION | 8 +-- MD5 | 38 ++++++++--------- NAMESPACE | 1 R/estimator.R | 45 +++++++++++++++----- R/matrixpls.R | 9 ++++ R/matrixpls.boot.R | 4 - R/matrixpls.plspm.R | 9 ++-- R/matrixpls.postestimation.R | 91 ++++++++++++++++++++++++++++++++---------- R/matrixpls.sim.R | 13 ++++-- R/outerEstim.R | 8 +++ R/paramEstimator.R | 49 +++++++++++++++++++--- R/weightFun.R | 6 +- man/estimator.Rd | 11 +++-- man/fitted.matrixpls.Rd | 2 man/outerEstim.Rd | 5 ++ man/residuals.matrixpls.Rd | 38 +++++++++++++---- man/weightFun.Rd | 8 +-- vignettes/compileVignette.R | 2 vignettes/matrixpls-intro.Rmd | 46 ++++++++++++++++----- vignettes/matrixpls-intro.bib | 12 +++++ 20 files changed, 303 insertions(+), 102 deletions(-)
Title: Variations of Parallel Coordinate Plots for Categorical Data
Description: Create hammock plots, parallel sets, and common angle plots
with 'ggplot2'.
Author: Heike Hofmann [aut, cre],
Marie Vendettuoli [aut]
Maintainer: Heike Hofmann <hofmann@mail.iastate.edu>
Diff between ggparallel versions 0.1.2 dated 2015-08-21 and 0.2.0 dated 2016-12-05
DESCRIPTION | 24 +++++++---- MD5 | 18 ++++---- NAMESPACE | 2 NEWS | 4 + R/parallel.R | 20 +++++---- inst/CITATION |only inst/examples/ggparallel-ex.R | 43 ++++++++++++++++---- inst/new-try.R |only man/genes.Rd | 19 -------- man/ggparallel.Rd | 89 +++++++++++++++++++++++++++++++++++++++++- man/package-ggparallel.Rd | 2 11 files changed, 167 insertions(+), 54 deletions(-)
Title: Download and Aggregate High Frequency Trading Data from Bovespa
Description: Downloads and aggregates high frequency trading data for Brazilian instruments directly from Bovespa ftp site <ftp://ftp.bmf.com.br/MarketData/>.
Author: Marcelo Perlin [aut, cre],
Henrique Ramos [ctb]
Maintainer: Marcelo Perlin <marceloperlin@gmail.com>
Diff between GetHFData versions 1.2.1 dated 2016-11-07 and 1.2.2 dated 2016-12-05
DESCRIPTION | 6 MD5 | 16 - NEWS.md | 7 R/OnAttach.R | 2 build/vignette.rds |binary inst/doc/ghfd-vignette.R | 118 ++++++------ inst/doc/ghfd-vignette.Rmd | 9 inst/doc/ghfd-vignette.html | 414 ++++++++++++++++++++++---------------------- vignettes/ghfd-vignette.Rmd | 9 9 files changed, 295 insertions(+), 286 deletions(-)
Title: Solve Generalized Estimating Equations
Description: GEE estimation of the parameters in mean structures with possible
correlation between the outcomes. User-specified mean link and variance
functions are allowed, along with observation weighting. The "M" in the name
"geeM" is meant to emphasize the use of the Matrix package, which allows for an
implementation based fully in R.
Author: Lee McDaniel [aut, cre],
Nick Henderson [aut],
Melanie Prague [ctb] (Suggested code to fix weighting)
Maintainer: Lee McDaniel <lmcda4@lsuhsc.edu>
Diff between geeM versions 0.9.0 dated 2016-06-17 and 0.10.0 dated 2016-12-05
DESCRIPTION | 20 +++++---- MD5 | 20 +++++---- NAMESPACE | 4 - R/geem.R | 115 +++++++++++++++++++++++++++++++++-------------------- R/print.R | 2 R/updatealpha.R | 58 +++++++++++++++++--------- R/updatematrices.R | 4 + R/utility.R | 4 + inst |only man/geem.Rd | 6 ++ tests |only 11 files changed, 150 insertions(+), 83 deletions(-)
Title: Downloads and Organizes Financial Data for Multiple Tickers
Description: Makes it easy to download a large number of trade data from Yahoo or Google Finance.
Author: Marcelo Perlin [aut, cre]
Maintainer: Marcelo Perlin <marceloperlin@gmail.com>
Diff between BatchGetSymbols versions 1.0 dated 2016-11-06 and 1.1 dated 2016-12-05
BatchGetSymbols-1.0/BatchGetSymbols/inst/extdata |only BatchGetSymbols-1.1/BatchGetSymbols/DESCRIPTION | 9 BatchGetSymbols-1.1/BatchGetSymbols/MD5 | 21 BatchGetSymbols-1.1/BatchGetSymbols/NEWS.md | 7 BatchGetSymbols-1.1/BatchGetSymbols/R/BatchGetSymbols.R | 7 BatchGetSymbols-1.1/BatchGetSymbols/R/OnAttach.R |only BatchGetSymbols-1.1/BatchGetSymbols/build/vignette.rds |binary BatchGetSymbols-1.1/BatchGetSymbols/inst/CITATION |only BatchGetSymbols-1.1/BatchGetSymbols/inst/doc/BatchGetSymbols-vignette.R | 83 +- BatchGetSymbols-1.1/BatchGetSymbols/inst/doc/BatchGetSymbols-vignette.Rmd | 21 BatchGetSymbols-1.1/BatchGetSymbols/inst/doc/BatchGetSymbols-vignette.html | 326 +++++----- BatchGetSymbols-1.1/BatchGetSymbols/man/BatchGetSymbols.Rd | 107 +-- BatchGetSymbols-1.1/BatchGetSymbols/vignettes/BatchGetSymbols-vignette.Rmd | 21 13 files changed, 317 insertions(+), 285 deletions(-)
More information about BatchGetSymbols at CRAN
Permanent link
Title: Most Likely Transformations: Documentation and Regression Tests
Description: Additional documentation, a package vignette and
regression tests for package mlt.
Author: Torsten Hothorn [aut, cre]
Maintainer: Torsten Hothorn <Torsten.Hothorn@R-project.org>
Diff between mlt.docreg versions 0.1-3 dated 2016-12-01 and 0.1-4 dated 2016-12-05
DESCRIPTION | 8 ++++---- MD5 | 16 ++++++++-------- inst/NEWS.Rd | 8 ++++++++ inst/doc/mlt.R | 4 ++-- inst/doc/mlt.Rnw | 8 ++++---- inst/doc/mlt.pdf |binary tests/timedep_covar.R | 37 +++++++++++++++++++++++++------------ tests/timedep_covar.Rout.save | 39 ++++++++++++++++++++++++++------------- vignettes/mlt.Rnw | 8 ++++---- 9 files changed, 81 insertions(+), 47 deletions(-)
Title: Inhomogeneous Self-Exciting Process
Description: Simulate an inhomogeneous self-exciting process (IHSEP), or Hawkes process, with a given (possibly time-varying) baseline intensity and an excitation function. Calculate the likelihood of an IHSEP with given baseline intensity and excitation functions for an (increasing) sequence of event times. Calculate the point process residuals (integral transforms of the original event times). Calculate the mean intensity process.
Author: Feng Chen <feng.chen@unsw.edu.au>
Maintainer: Feng Chen <feng.chen@unsw.edu.au>
Diff between IHSEP versions 0.0 dated 2016-08-18 and 0.1 dated 2016-12-05
DESCRIPTION | 10 +++++----- MD5 | 16 ++++++++-------- R/mloglik1a.R | 2 +- R/mloglik1b.R | 2 +- man/mloglik1a.Rd | 2 +- man/mloglik1b.Rd | 3 ++- src/mloglik1c.cpp | 2 +- src/mloglik1d.cpp | 2 +- src/mloglik1e.cpp | 2 +- 9 files changed, 21 insertions(+), 20 deletions(-)
Title: 'ggplot2' Based Publication Ready Plots
Description: 'ggplot2' is an excellent and flexible package for elegant data
visualization in R. However the default generated plots requires some formatting
before we can send them for publication. Furthermore, to customize a 'ggplot',
the syntax is opaque and this raises the level of difficulty for researchers
with no advanced R programming skills. 'ggpubr' provides some easy-to-use
functions for creating and customizing 'ggplot2'- based publication ready plots.
Author: Alboukadel Kassambara [aut, cre]
Maintainer: Alboukadel Kassambara <alboukadel.kassambara@gmail.com>
Diff between ggpubr versions 0.1.0 dated 2016-07-20 and 0.1.1 dated 2016-12-05
DESCRIPTION | 35 +++--- MD5 | 86 ++++++++------- NAMESPACE | 3 NEWS.md | 31 +++++ R/geom_exec.R |only R/ggbarplot.R | 54 ++++++++-- R/ggboxplot.R | 15 +- R/ggdensity.R | 10 + R/ggdotchart.R | 2 R/ggdotplot.R | 11 +- R/ggecdf.R | 9 + R/ggerrorplot.R | 4 R/gghistogram.R | 18 ++- R/ggline.R | 11 +- R/ggmaplot.R | 8 - R/ggpar.R | 51 +++++---- R/ggpie.R | 38 ++++--- R/ggqqplot.R | 10 + R/ggscatter.R | 94 +++++++++++++++-- R/ggstripchart.R | 11 +- R/ggtext.R |only R/ggviolin.R | 11 +- R/theme_pubr.R | 13 ++ R/utilities.R | 253 ++++++++++++++++++++++++++++++----------------- README.md | 7 + man/geom_exec.Rd |only man/ggbarplot.Rd | 25 +++- man/ggboxplot.Rd | 8 - man/ggdensity.Rd | 6 - man/ggdotchart.Rd | 7 - man/ggdotplot.Rd | 10 - man/ggecdf.Rd | 4 man/ggerrorplot.Rd | 8 - man/gghistogram.Rd | 10 - man/ggline.Rd | 10 - man/ggmaplot.Rd | 22 +--- man/ggpar.Rd | 43 ++++--- man/ggpie.Rd | 30 +++-- man/ggqqplot.Rd | 4 man/ggscatter.Rd | 28 +++-- man/ggstripchart.Rd | 10 - man/ggtext.Rd |only man/ggviolin.Rd | 10 - man/stat_chull.Rd | 4 man/stat_conf_ellipse.Rd | 4 man/theme_pubr.Rd | 4 46 files changed, 690 insertions(+), 342 deletions(-)
Title: Estimation of the Conditional Survival Function for Ordered
Multivariate Failure Time Data
Description: Method to implement some newly developed methods for the
estimation of the conditional survival function.
Author: Luis Meira-Machado and Marta Sestelo
Maintainer: Marta Sestelo <sestelo@uvigo.es>
Diff between condSURV versions 1.0.0 dated 2016-10-29 and 2.0.0 dated 2016-12-05
condSURV-1.0.0/condSURV/man/survIPCW.Rd |only condSURV-2.0.0/condSURV/DESCRIPTION | 10 condSURV-2.0.0/condSURV/MD5 | 48 ++-- condSURV-2.0.0/condSURV/NAMESPACE | 11 condSURV-2.0.0/condSURV/NEWS | 16 + condSURV-2.0.0/condSURV/R/plot.surv.R | 79 +++++-- condSURV-2.0.0/condSURV/R/print.surv.R |only condSURV-2.0.0/condSURV/R/summary.surv.R |only condSURV-2.0.0/condSURV/R/survCOND.R | 207 +++++++++++++++++- condSURV-2.0.0/condSURV/R/survCS.R | 9 condSURV-2.0.0/condSURV/R/survIPCW.R | 268 ++++++++++-------------- condSURV-2.0.0/condSURV/R/survKMW.R | 93 ++------ condSURV-2.0.0/condSURV/R/survLDM.R | 54 ---- condSURV-2.0.0/condSURV/R/survPLDM.R | 52 ---- condSURV-2.0.0/condSURV/build/partial.rdb |binary condSURV-2.0.0/condSURV/man/Beran.Rd | 9 condSURV-2.0.0/condSURV/man/KM.Rd | 3 condSURV-2.0.0/condSURV/man/KMW.Rd | 3 condSURV-2.0.0/condSURV/man/LLW.Rd | 5 condSURV-2.0.0/condSURV/man/NWW.Rd | 5 condSURV-2.0.0/condSURV/man/PKM.Rd | 5 condSURV-2.0.0/condSURV/man/PKMW.Rd | 3 condSURV-2.0.0/condSURV/man/condSURV-package.Rd | 3 condSURV-2.0.0/condSURV/man/plot.surv.Rd | 44 ++- condSURV-2.0.0/condSURV/man/summary.surv.Rd |only condSURV-2.0.0/condSURV/man/survCOND.Rd | 103 ++++++--- condSURV-2.0.0/condSURV/man/survCS.Rd | 21 + 27 files changed, 596 insertions(+), 455 deletions(-)
Title: Optimal and Fast Univariate k-Means Clustering
Description: A dynamic programming algorithm for optimal univariate k-means
clustering. Minimizing the sum of squares of within-cluster distances, the
algorithm guarantees optimality and reproducibility. Its advantage over
heuristic clustering algorithms in efficiency and accuracy is increasingly
pronounced as the number of clusters k increases. With optional weights,
the algorithm can also analyze 1-D signals for segmentation and peak
calling. An auxiliary function can generate adaptive histograms to make
patterns in data stand out. For univariate data analysis, the package
provides a powerful alternative to heuristic clustering algorithms.
Author: Joe Song [aut, cre], Haizhou Wang [aut]
Maintainer: Joe Song <joemsong@cs.nmsu.edu>
Diff between Ckmeans.1d.dp versions 3.4.6-4 dated 2016-10-22 and 3.4.6-5 dated 2016-12-05
DESCRIPTION | 20 ++++++++++++-------- MD5 | 27 ++++++++++++++++++--------- NEWS | 35 ++++++++++++++++++++++++++--------- build |only inst/CITATION | 26 +++++++++++++------------- inst/doc |only man/Ckmeans.1d.dp-package.Rd | 9 +++++---- man/Ckmeans.1d.dp.Rd | 23 +++++++++++++---------- man/ahist.Rd | 36 ++++++++++++++++++------------------ man/plot.Ckmeans.1d.dp.Rd | 2 +- man/print.Ckmeans.1d.dp.Rd | 2 +- src/weighted_opt_uni_kmeans.cpp | 4 ++-- vignettes |only 13 files changed, 109 insertions(+), 75 deletions(-)
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Title: Visual Data Mining Tools for R
Description: This provides web-based visual data-mining tools by adding
interactive functions to 'ggplot2' graphics. Brushing and linking between the
multiple plots is one of the main feature of this package. Currently scatter
plots, histograms, parallel coordinate plots and choropleth maps are supported.
Author: Tomokazu Fujino
Maintainer: Tomokazu Fujino <fujino@fwu.ac.jp>
Diff between vdmR versions 0.2.2 dated 2016-02-27 and 0.2.3 dated 2016-12-05
DESCRIPTION | 12 +- MD5 | 14 +-- R/vcmap.R | 197 +++++++++++++++++++++++----------------------- R/vhist.R | 225 +++++++++++++++++++++++++++-------------------------- build/vignette.rds |binary exec/vdmr_hist.js | 126 +++++++++++++---------------- exec/vdmr_pcp.js | 123 +++++++++++++--------------- exec/vdmr_scat.js | 124 +++++++++++++---------------- 8 files changed, 403 insertions(+), 418 deletions(-)
Title: Dataframe Summaries, Frequency Tables and Descriptive Stats with
Various Output Formats
Description: Built around three key functions: 1) freq() generates
frequency tables reporting counts and proportions (including cumulative) for factors
and other discrete data; 2) descr() gives all common central tendency statistics and
measures of dispersion for numerical data; 3) dfSummary() gives as much information
as possible on a dataframe's columns in a legible table. freq() and
descr() support weights, and all three functions support 'Hmisc' or 'pander' labels.
A variety of output formats are available (plain text, 'rmarkdown' and HTML).
An additional misc function, what.is(), displays all common properties of an object
(its class, type, mode, attributes, etc.) and extends the base is() function,
checking the object against most is.() functions.
Author: Dominic Comtois
Maintainer: Dominic Comtois <dominic.comtois@gmail.com>
Diff between summarytools versions 0.6 dated 2016-11-21 and 0.6.5 dated 2016-12-05
summarytools-0.6.5/summarytools/DESCRIPTION | 10 summarytools-0.6.5/summarytools/MD5 | 29 +- summarytools-0.6.5/summarytools/NEWS | 10 summarytools-0.6.5/summarytools/R/descr.R | 32 +- summarytools-0.6.5/summarytools/R/dfSummary.R | 170 ++++++++----- summarytools-0.6.5/summarytools/R/freq.R | 9 summarytools-0.6.5/summarytools/R/misc.R | 9 summarytools-0.6.5/summarytools/R/print.summarytools.R | 83 +++--- summarytools-0.6.5/summarytools/inst/doc/Introduction.Rmd | 2 summarytools-0.6.5/summarytools/inst/doc/Introduction.html | 60 ++-- summarytools-0.6.5/summarytools/man/descr.Rd | 12 summarytools-0.6.5/summarytools/man/dfSummary.Rd | 8 summarytools-0.6.5/summarytools/man/freq.Rd | 2 summarytools-0.6.5/summarytools/man/print.summarytools.Rd | 15 - summarytools-0.6.5/summarytools/vignettes/Introduction.Rmd | 2 summarytools-0.6/summarytools/man/view.Rd |only 16 files changed, 262 insertions(+), 191 deletions(-)
Title: Tools for Making and Spoiling Sudoku Games
Description: Tools for making, retrieving, displaying and solving sudoku games.
This package is an alternative to the earlier sudoku-solver package,
'sudoku'. The present package uses a slightly different algorithm, has a
simpler coding and presents a few more sugar tools, such as plot and print
methods. Solved sudoku games are of some interest in Experimental Design
as examples of Latin Square designs with additional balance constraints.
Author: Bill Venables <Bill.Venables@gmail.com>
Maintainer: Bill Venables <Bill.Venables@gmail.com>
Diff between sudokuAlt versions 0.1-7 dated 2016-07-04 and 0.1-9 dated 2016-12-05
DESCRIPTION | 9 +++--- MD5 | 32 ++++++++++----------- NAMESPACE | 2 - R/sudokuAlt.R | 7 +--- man/as.sudoku.Rd | 2 - man/as.sudoku.matrix.Rd | 2 - man/as.sudoku.sudoku.Rd | 2 - man/daysAgo.Rd | 4 +- man/fetchAUGame.Rd | 72 ++++++++++++++++++++++++------------------------ man/fetchUKGame.Rd | 9 +----- man/makeGame.Rd | 2 - man/originalGame.Rd | 4 +- man/plot.sudoku.Rd | 2 - man/print.sudoku.Rd | 2 - man/seedGame.Rd | 2 - man/solve.sudoku.Rd | 2 - man/solveGame.Rd | 2 - 17 files changed, 75 insertions(+), 82 deletions(-)
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Title: Read GenAlEx Files Directly from Excel
Description: GenAlEx is a popular Excel macro for genetic analysis and the
'poppr' R package allows import of GenAlEx formatted CSV data for genetic
data analysis in R. This package allows for the import of GenAlEx formatted
Excel files, serving as a small 'poppr' add on for those who have trouble or
simply do not want to export their data into CSV format.
Author: Zhian N. Kamvar [cre, aut],
Niklaus J. Grünwald [ths]
Maintainer: Zhian N. Kamvar <zkamvar@gmail.com>
Diff between popprxl versions 0.1.2 dated 2016-05-25 and 0.1.3 dated 2016-12-05
DESCRIPTION | 21 +++++++++++---------- MD5 | 12 ++++++------ NEWS | 6 ++++++ build/vignette.rds |binary inst/doc/quickstart.Rmd | 4 ++-- inst/doc/quickstart.html | 21 +++++++++------------ vignettes/quickstart.Rmd | 4 ++-- 7 files changed, 36 insertions(+), 32 deletions(-)
Title: Phylogenetic Comparative Methods for High-Dimensional Traits
Description: Tools for studying the evolution of high-dimensional traits
(morphometric, function-valued, etc.) including ancestral state reconstruction,
estimating phylogenetic signal, and assessing correlated trait evolution. Visit
http://www.phylocurve.org for more information.
Author: Eric W. Goolsby
Maintainer: Eric W. Goolsby <eric.goolsby.evolution@gmail.com>
Diff between phylocurve versions 2.0.6 dated 2016-06-15 and 2.0.7 dated 2016-12-05
DESCRIPTION | 18 +++++++----- MD5 | 12 ++++---- NAMESPACE | 1 R/RcppExports.R | 2 - R/phylocurve.R | 29 +++++++++++--------- man/phylocurve-package.Rd | 4 +- src/RcppExports.cpp | 66 +++++++++++++++++++++++----------------------- 7 files changed, 70 insertions(+), 62 deletions(-)
Title: Perceptual Analysis, Visualization and Organization of Spectral
Color Data in R
Description: A cohesive framework for parsing, analyzing and organizing color from spectral data.
Author: Rafael Maia [aut, cre],
Chad Eliason [aut],
Pierre-Paul Bitton [aut],
Thomas White [aut]
Maintainer: Rafael Maia <rm72@zips.uakron.edu>
Diff between pavo versions 0.5-6 dated 2016-10-20 and 1.0.0 dated 2016-12-05
pavo-0.5-6/pavo/R/summary.tcs.R |only pavo-0.5-6/pavo/R/tcs.R |only pavo-0.5-6/pavo/man/summary.tcs.Rd |only pavo-0.5-6/pavo/man/tcs.Rd |only pavo-1.0.0/pavo/DESCRIPTION | 39 -- pavo-1.0.0/pavo/MD5 | 184 ++++++---- pavo-1.0.0/pavo/NAMESPACE | 34 + pavo-1.0.0/pavo/NEWS | 37 +- pavo-1.0.0/pavo/R/aggplot.R | 56 ++- pavo-1.0.0/pavo/R/aggspec.R | 204 +++++------ pavo-1.0.0/pavo/R/as.rspec.r | 15 pavo-1.0.0/pavo/R/axistetra.R |only pavo-1.0.0/pavo/R/categorical.R |only pavo-1.0.0/pavo/R/catplot.R |only pavo-1.0.0/pavo/R/cie.R |only pavo-1.0.0/pavo/R/cieplot.R |only pavo-1.0.0/pavo/R/coc.R |only pavo-1.0.0/pavo/R/cocplot.R |only pavo-1.0.0/pavo/R/coldist.R | 544 +++++++++++++++++++----------- pavo-1.0.0/pavo/R/colspace.r |only pavo-1.0.0/pavo/R/data-flowers.R |only pavo-1.0.0/pavo/R/data-transmissiondata.R |only pavo-1.0.0/pavo/R/diplot.R |only pavo-1.0.0/pavo/R/dispace.R |only pavo-1.0.0/pavo/R/explorespec.R | 248 ++++++++----- pavo-1.0.0/pavo/R/getspec.R | 249 ++++++++----- pavo-1.0.0/pavo/R/getspecf.R |only pavo-1.0.0/pavo/R/hexagon.R |only pavo-1.0.0/pavo/R/hexplot.R |only pavo-1.0.0/pavo/R/internal.R | 373 ++++++++++++++------ pavo-1.0.0/pavo/R/irrad2flux.R | 8 pavo-1.0.0/pavo/R/legendtetra.R |only pavo-1.0.0/pavo/R/merge.rspec.R | 22 - pavo-1.0.0/pavo/R/pavo-deprecated.R |only pavo-1.0.0/pavo/R/pavo-package.R | 21 - pavo-1.0.0/pavo/R/peakshape.R | 67 ++- pavo-1.0.0/pavo/R/plot.colspace.r |only pavo-1.0.0/pavo/R/plot.rspec.r | 35 + pavo-1.0.0/pavo/R/plotsmooth.R | 19 - pavo-1.0.0/pavo/R/points.colspace.r |only pavo-1.0.0/pavo/R/procspec.R | 71 ++- pavo-1.0.0/pavo/R/projplot.R | 82 +--- pavo-1.0.0/pavo/R/projpoints.R |only pavo-1.0.0/pavo/R/segclass.R | 22 - pavo-1.0.0/pavo/R/sensmodel.R | 67 ++- pavo-1.0.0/pavo/R/spec2rgb.R | 63 ++- pavo-1.0.0/pavo/R/subset.rspec.R | 73 ++-- pavo-1.0.0/pavo/R/summary.colspace.R |only pavo-1.0.0/pavo/R/summary.rspec.R | 75 ++-- pavo-1.0.0/pavo/R/summary.vismodel.R | 23 - pavo-1.0.0/pavo/R/sysdata.rda |binary pavo-1.0.0/pavo/R/tcspace.R |only pavo-1.0.0/pavo/R/tcsplot.R | 184 +++++----- pavo-1.0.0/pavo/R/tcspoints.R | 30 - pavo-1.0.0/pavo/R/tcsvol.R | 56 +-- pavo-1.0.0/pavo/R/tetraplot.R |only pavo-1.0.0/pavo/R/triplot.R |only pavo-1.0.0/pavo/R/trispace.R |only pavo-1.0.0/pavo/R/vismodel.R | 321 ++++++++++++----- pavo-1.0.0/pavo/R/vol.R |only pavo-1.0.0/pavo/R/voloverlap.R | 144 +++++-- pavo-1.0.0/pavo/README.md | 20 - pavo-1.0.0/pavo/build |only pavo-1.0.0/pavo/data/flowers.rda |only pavo-1.0.0/pavo/inst/CITATION | 11 pavo-1.0.0/pavo/inst/doc |only pavo-1.0.0/pavo/inst/extdata |only pavo-1.0.0/pavo/man/aggplot.Rd | 14 pavo-1.0.0/pavo/man/aggspec.Rd | 19 - pavo-1.0.0/pavo/man/as.rspec.Rd | 8 pavo-1.0.0/pavo/man/axistetra.Rd |only pavo-1.0.0/pavo/man/categorical.Rd |only pavo-1.0.0/pavo/man/catplot.Rd |only pavo-1.0.0/pavo/man/cie.Rd |only pavo-1.0.0/pavo/man/cieplot.Rd |only pavo-1.0.0/pavo/man/coc.Rd |only pavo-1.0.0/pavo/man/cocplot.Rd |only pavo-1.0.0/pavo/man/coldist.Rd | 179 +++++++-- pavo-1.0.0/pavo/man/colspace.Rd |only pavo-1.0.0/pavo/man/diplot.Rd |only pavo-1.0.0/pavo/man/dispace.Rd |only pavo-1.0.0/pavo/man/explorespec.Rd | 5 pavo-1.0.0/pavo/man/flowers.Rd |only pavo-1.0.0/pavo/man/getspec.Rd | 16 pavo-1.0.0/pavo/man/getspecf.Rd |only pavo-1.0.0/pavo/man/hexagon.Rd |only pavo-1.0.0/pavo/man/hexplot.Rd |only pavo-1.0.0/pavo/man/irrad2flux.Rd | 8 pavo-1.0.0/pavo/man/legendtetra.Rd |only pavo-1.0.0/pavo/man/merge.rspec.Rd | 15 pavo-1.0.0/pavo/man/pavo-deprecated.Rd |only pavo-1.0.0/pavo/man/pavo-package.Rd | 17 pavo-1.0.0/pavo/man/peakshape.Rd | 22 - pavo-1.0.0/pavo/man/plot.colspace.Rd |only pavo-1.0.0/pavo/man/plot.rspec.Rd | 9 pavo-1.0.0/pavo/man/plotsmooth.Rd | 12 pavo-1.0.0/pavo/man/points.colspace.Rd |only pavo-1.0.0/pavo/man/procspec.Rd | 26 - pavo-1.0.0/pavo/man/projplot.Rd | 29 + pavo-1.0.0/pavo/man/segclass.Rd | 11 pavo-1.0.0/pavo/man/sensmodel.Rd | 24 - pavo-1.0.0/pavo/man/spec2rgb.Rd | 8 pavo-1.0.0/pavo/man/subset.rspec.Rd | 32 - pavo-1.0.0/pavo/man/summary.colspace.Rd |only pavo-1.0.0/pavo/man/summary.rspec.Rd | 40 +- pavo-1.0.0/pavo/man/summary.vismodel.Rd | 14 pavo-1.0.0/pavo/man/tcspace.Rd |only pavo-1.0.0/pavo/man/tcsplot.Rd | 55 +-- pavo-1.0.0/pavo/man/tetraplot.Rd |only pavo-1.0.0/pavo/man/transmissiondata.Rd |only pavo-1.0.0/pavo/man/triplot.Rd |only pavo-1.0.0/pavo/man/trispace.Rd |only pavo-1.0.0/pavo/man/vismodel.Rd | 160 ++++++-- pavo-1.0.0/pavo/man/vol.Rd |only pavo-1.0.0/pavo/man/voloverlap.Rd | 62 ++- pavo-1.0.0/pavo/tests |only pavo-1.0.0/pavo/vignettes |only 117 files changed, 2701 insertions(+), 1481 deletions(-)
Title: Data Sets for the Book "Experimental Design for Laboratory
Biologists"
Description: Contains data sets to accompany the book: Lazic SE
(2016). "Experimental Design for Laboratory Biologists: Maximising Information
and Improving Reproducibility". Cambridge University Press.
Author: Stanley E. Lazic
Maintainer: Stanley E. Lazic <stan.lazic@cantab.net>
Diff between labstats versions 1.0 dated 2016-01-14 and 1.0.1 dated 2016-12-05
labstats-1.0.1/labstats/DESCRIPTION | 14 +++++++------- labstats-1.0.1/labstats/MD5 | 3 +-- labstats-1.0/labstats/README.md |only 3 files changed, 8 insertions(+), 9 deletions(-)
Title: Estimation and Use of the Generalised (Tukey) Lambda
Distribution
Description: The generalised lambda distribution, or Tukey lambda distribution, provides a wide variety of shapes with one functional form.
This package provides random numbers, quantiles, probabilities, densities and density quantiles for four different parameterisations of the distribution.
It provides the density function, distribution function, and Quantile-Quantile plots.
It implements a variety of estimation methods for the distribution, including diagnostic plots.
Estimation methods include the starship (all 4 parameterisations) and a number of methods for only the FKML parameterisation.
These include maximum likelihood, maximum product of spacings, Titterington's method, Moments, L-Moments, Trimmed L-Moments and Distributional Least Absolutes.
Author: Robert King <Robert.King@newcastle.edu.au>,
Benjamin Dean <Benjamin.Dean@uon.edu.au>, Sigbert Klinke
Maintainer: Robert King <Robert.King@newcastle.edu.au>
Diff between gld versions 2.4 dated 2016-09-18 and 2.4.1 dated 2016-12-05
DESCRIPTION | 12 ++++++------ MD5 | 14 +++++++------- NAMESPACE | 1 - R/fit.gpd.R | 19 +++++-------------- R/methods.R | 23 ----------------------- TODO | 4 ++++ man/GeneralisedLambdaDistribution.Rd | 6 +++--- man/fit.gpd.Rd | 2 +- 8 files changed, 26 insertions(+), 55 deletions(-)
Title: Fine-Scale Population Analysis
Description: Statistical tool set for population genetics. The package provides empirical Bayes estimator of Fst, Nei's Gst, Nei & Chesser's Gst, and Weir & Cockerham's theta adapted for pairwise comparison. It also provides interfaces to read and manipulate 'GENEPOP' format data files and allele/haplotype frequency format files.
Author: Reiichiro Nakamichi, Hirohisa Kishino, Shuichi Kitada
Maintainer: Reiichiro Nakamichi <nakamichi@affrc.go.jp>
Diff between FinePop versions 1.1.1 dated 2016-10-17 and 1.2.0 dated 2016-12-05
DESCRIPTION | 10 +++++----- MD5 | 30 +++++++++++++++++------------- NAMESPACE | 2 +- R/EBFST.R | 17 +++++++++++++---- R/GstN.R | 8 ++++---- R/GstNC.R |only R/read.frequency.R |only build/partial.rdb |binary data/data.JSM.rda |binary man/EBFST.Rd | 14 +++++++++----- man/FinePop-package.Rd | 1 + man/GstN.Rd | 17 +++++++---------- man/GstNC.Rd |only man/clip.genepop.Rd | 8 ++++---- man/data.JSM.Rd | 25 ++++++++++++++++++++----- man/read.frequency.Rd |only man/read.genepop.Rd | 12 ++++++------ man/thetaWC.pair.Rd | 8 ++++---- 18 files changed, 91 insertions(+), 61 deletions(-)
Title: Functions and Datasets for "Forest Analytics with R"
Description: Provides functions and datasets from the book "Forest Analytics with R".
Author: Andrew Robinson and Jeff Hamann
Maintainer: Andrew Robinson <apro@unimelb.edu.au>
Diff between FAwR versions 1.1.0 dated 2015-03-24 and 1.1.1 dated 2016-12-05
ChangeLog | 8 +++ DESCRIPTION | 10 ++-- MD5 | 16 +++---- NAMESPACE | 18 +++----- R/generate_log_volumes.r | 99 +++++++++++++++++++++++------------------------ data/gutten.rda |binary data/stage.rda |binary data/sweetgum.rda |binary data/ufc.rda |binary 9 files changed, 77 insertions(+), 74 deletions(-)
Title: Easy Interface to Effective Concentration Calculations
Description: Because fungicide resistance is an important phenotypic trait for
fungi and oomycetes, it is necessary to have a standardized method of
statistically analyzing the Effective Concentration (EC) values. This
package is designed for those who are not terribly familiar with R to be
able to analyze and plot an entire set of isolates using the 'drc' package.
Author: Zhian N. Kamvar [cre, aut],
Niklaus J. Grunwald [ths, ctb]
Maintainer: Zhian N. Kamvar <zkamvar@gmail.com>
Diff between ezec versions 1.0.0 dated 2016-06-13 and 1.0.1 dated 2016-12-05
ezec-1.0.0/ezec/tests/testthat/Rplots.pdf |only ezec-1.0.1/ezec/DESCRIPTION | 10 +++++----- ezec-1.0.1/ezec/MD5 | 15 +++++++-------- ezec-1.0.1/ezec/NEWS | 5 +++++ ezec-1.0.1/ezec/README.md | 6 +++--- ezec-1.0.1/ezec/build/vignette.rds |binary ezec-1.0.1/ezec/inst/doc/getting_started.Rmd | 2 +- ezec-1.0.1/ezec/inst/doc/getting_started.html | 16 +++++++--------- ezec-1.0.1/ezec/vignettes/getting_started.Rmd | 2 +- 9 files changed, 29 insertions(+), 27 deletions(-)
Title: Compound Poisson Linear Models
Description: Likelihood-based and Bayesian methods for various compound Poisson linear models.
Author: Yanwei (Wayne) Zhang
Maintainer: Yanwei (Wayne) Zhang <actuary_zhang@hotmail.com>
Diff between cplm versions 0.7-4 dated 2015-08-21 and 0.7-5 dated 2016-12-05
DESCRIPTION | 8 MD5 | 26 NEWS | 9 R/bcplm.R | 371 +++++------ R/cpglmm.R | 10 R/gini.R | 5 data/AutoClaim.RData |binary data/ClaimTriangle.RData |binary data/FineRoot.RData |binary inst/doc/TweediePaper.pdf |binary inst/doc/cplm.pdf |binary man/bcplm.Rd | 5 man/cpglmm.Rd | 5 vignettes/cplm.Rnw | 1446 +++++++++++++++++++++++----------------------- 14 files changed, 954 insertions(+), 931 deletions(-)
Title: Analyze Bunching in a Kink or Notch Setting
Description: View and analyze data where bunching is expected. Estimate counter-
factual distributions. For earnings data, estimate the compensated
elasticity of earnings w.r.t. the net-of-tax rate.
Author: Itai Trilnick [aut, cre]
Maintainer: Itai Trilnick <itai.trilnick@berkeley.edu>
Diff between bunchr versions 1.1.0 dated 2016-12-02 and 1.1.1 dated 2016-12-05
bunchr-1.1.0/bunchr/inst/bunchApp/rsconnect |only bunchr-1.1.1/bunchr/DESCRIPTION | 6 +++--- bunchr-1.1.1/bunchr/MD5 | 9 ++++----- bunchr-1.1.1/bunchr/NAMESPACE | 1 + bunchr-1.1.1/bunchr/R/bunchApp.R | 5 ++++- bunchr-1.1.1/bunchr/man/bunchApp.Rd | 3 ++- 6 files changed, 14 insertions(+), 10 deletions(-)
Title: Confidence Intervals and Sample Size Determination for a
Binomial Proportion under Simple Random Sampling and Pooled
Sampling
Description:
A suite of functions to compute confidence intervals and necessary
sample sizes for the parameter p of the Bernoulli B(p)
distribution under simple random sampling or under pooled
sampling. Such computations are e.g. of interest when investigating
the incidence or prevalence in populations.
The package contains functions to compute coverage probabilities and
coverage coefficients of the provided confidence intervals
procedures. Sample size calculations are based on expected length.
Author: Michael Höhle [aut, cre], Wei Liu [ctb]
Maintainer: Michael Höhle <hoehle@math.su.se>
Diff between binomSamSize versions 0.1-3 dated 2013-12-10 and 0.1-4 dated 2016-12-05
DESCRIPTION | 23 ++++++++++++++--------- MD5 | 11 +++++++---- NAMESPACE | 48 +++++++++++++++++++++++++----------------------- README.md |only man/ciss.liubailey.Rd | 16 ++++++++-------- src/wei.f | 16 ++++++++-------- tests |only 7 files changed, 62 insertions(+), 52 deletions(-)
More information about AmmoniaConcentration at CRAN
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