Title: R Interface for H2O
Description: R scripting functionality for H2O, the open source
math engine for big data that computes parallel distributed
machine learning algorithms such as generalized linear models,
gradient boosting machines, random forests, and neural networks
(deep learning) within various cluster environments.
Author: The H2O.ai team
Maintainer: Tom Kraljevic <tomk@0xdata.com>
Diff between h2o versions 3.10.0.8 dated 2016-10-14 and 3.10.2.2 dated 2017-01-17
DESCRIPTION | 20 - MD5 | 98 +++--- NAMESPACE | 17 + R/communication.R | 7 R/config.R |only R/connection.R | 136 +++++--- R/constants.R | 1 R/deeplearning.R | 630 +++++++++++++++++++++-------------------- R/deepwater.R |only R/frame.R | 509 ++++++++++++++++++++++++--------- R/gbm.R | 388 +++++++++++++------------ R/glm.R | 460 ++++++++++++++++++----------- R/glrm.R | 332 ++++++++++----------- R/grid.R | 6 R/import.R | 11 R/kmeans.R | 205 +++++++------ R/kvstore.R | 6 R/models.R | 61 ++- R/naivebayes.R | 210 ++++++++----- R/parse.R | 14 R/pca.R | 157 +++++----- R/randomforest.R | 356 ++++++++++++----------- R/svd.R | 138 +++++--- inst/branch.txt | 2 inst/buildnum.txt | 2 man/as.data.frame.H2OFrame.Rd | 6 man/as.h2o.Rd | 54 +++ man/h2o-package.Rd | 8 man/h2o.computeGram.Rd |only man/h2o.cor.Rd | 4 man/h2o.cummax.Rd |only man/h2o.cummin.Rd |only man/h2o.cumprod.Rd |only man/h2o.cumsum.Rd |only man/h2o.deeplearning.Rd | 319 ++++++++++---------- man/h2o.deepwater.Rd |only man/h2o.deepwater.available.Rd |only man/h2o.gbm.Rd | 194 ++++++------ man/h2o.getGrid.Rd | 12 man/h2o.glm.Rd | 229 ++++++++------ man/h2o.glrm.Rd | 148 +++------ man/h2o.init.Rd | 3 man/h2o.isax.Rd |only man/h2o.kmeans.Rd | 81 ++--- man/h2o.mean.Rd | 30 + man/h2o.naiveBayes.Rd | 99 +++--- man/h2o.parseSetup.Rd | 4 man/h2o.partialPlot.Rd | 2 man/h2o.prcomp.Rd | 86 ++--- man/h2o.randomForest.Rd | 170 +++++------ man/h2o.sum.Rd | 10 man/h2o.svd.Rd | 75 ++-- man/h2o.year.Rd | 3 man/is.h2o.Rd |only man/plot.H2OTabulate.Rd | 2 man/use.package.Rd |only 56 files changed, 3020 insertions(+), 2285 deletions(-)
Title: Helps You to Code Cleaner
Description: Check your R code for some of the most common layout flaws.
Many tried to teach us how to write code less dreadful, be it implicitly as
B. W. Kernighan and D. M. Ritchie (1988) <ISBN:0-13-110362-8>
in 'The C Programming Language' did, be it
explicitly as R.C. Martin (2008) <ISBN:0-13-235088-2> in
'Clean Code: A Handbook of Agile Software Craftsmanship' did.
So we should check our code for files too long or wide, functions with too
many lines, too wide lines, too many arguments or too many levels of
nesting.
Note: This is not a static code analyzer like pylint or the like. Checkout
https://github.com/jimhester/lintr instead.
Author: Andreas Dominik Cullmann [aut, cre]
Maintainer: Andreas Dominik Cullmann <adc-r@arcor.de>
Diff between cleanr versions 1.1.2 dated 2016-12-21 and 1.1.3 dated 2017-01-17
DESCRIPTION | 6 +-- MD5 | 76 +++++++++++++++++++------------------- R/checks.R | 4 +- R/internals.R | 10 ++--- R/options.R | 2 - R/utils.R | 2 - R/wrappers.R | 2 - README.md | 23 ++++++++--- build/cleanr.pdf |binary build/vignette.rds |binary inst/doc/cleanr_Introduction.Rmd | 4 +- inst/doc/cleanr_Introduction.html | 70 +++++++++++++++++------------------ inst/source/R/checks.R | 4 +- inst/source/R/internals.R | 10 ++--- inst/source/R/options.R | 2 - inst/source/R/utils.R | 2 - inst/source/R/wrappers.R | 2 - inst/tests/cleanr_R_code.html | 18 ++++----- inst/tests/results/con1.html | 2 - inst/tests/results/con2.html | 2 - inst/tests/results/index.html | 2 - inst/tests/results/result1.html | 8 ++-- inst/tests/results/result2.html | 4 +- inst/tests/runit.R | 14 +------ man/check_functions_in_file.Rd | 2 - man/function_checks.Rd | 4 +- man/get_cleanr_options.Rd | 2 - man/get_function_body.Rd | 2 - man/is_not_false.Rd | 2 - man/throw.Rd | 4 +- man/tidy_findings.Rd | 4 +- tests/cleanr_R_code.html | 18 ++++----- tests/results/con1.html | 2 - tests/results/con2.html | 2 - tests/results/index.html | 2 - tests/results/result1.html | 8 ++-- tests/results/result2.html | 4 +- tests/runit.R | 14 +------ vignettes/cleanr_Introduction.Rmd | 4 +- 39 files changed, 166 insertions(+), 177 deletions(-)
Title: Bootstrap Methods for Various Network Estimation Routines
Description: Bootstrap methods to assess accuracy and stability of estimated network structures
and centrality indices. Allows for flexible specification of any undirected network
estimation procedure in R, and offers default sets for 'qgraph', 'IsingFit', 'IsingSampler',
'glasso', 'huge' and 'parcor' packages.
Author: Sacha Epskamp and Eiko I. Fried
Maintainer: Sacha Epskamp <mail@sachaepskamp.com>
Diff between bootnet versions 0.3 dated 2016-09-04 and 0.4 dated 2017-01-17
DESCRIPTION | 8 MD5 | 40 +-- NAMESPACE | 11 + NEWS | 44 +++- R/Smetric.R | 58 +++++ R/bootTable.R | 9 R/bootnet.R | 234 +++++++++++++-------- R/bootnetResultsMethods.R | 20 + R/centralityCompare.R | 8 R/checkInput.R | 414 ++++++++++++++++++++++++++------------ R/defaultFunctions.R | 493 +++++++++++++++++++++++++++++++++++++++++++++- R/estimateNetwork.R | 113 ++++++---- R/plotMethod.R | 13 + R/printMethod.R | 11 - R/summaryMethod.R | 40 +-- R/zzz.R | 2 man/binarize.Rd | 3 man/bootnet.Rd | 30 ++ man/corStability.Rd | 4 man/estimateNetwork.Rd | 110 ++++++++-- man/plotBootnetResult.Rd | 4 21 files changed, 1307 insertions(+), 362 deletions(-)
More information about WikidataQueryServiceR at CRAN
Permanent link
Title: Robust Ordinal Regression UTADIS
Description: Implementation of Robust Ordinal Regression for multiple criteria value-based sorting with preference information provided in form of possibly imprecise assignment examples, assignment-based pairwise comparisons, and desired class cardinalities [Kadzinski et al. 2015, <doi:10.1016/j.ejor.2014.09.050>].
Author: Krzysztof Ciomek
Maintainer: Krzysztof Ciomek <k.ciomek@gmail.com>
Diff between rorutadis versions 0.4.1 dated 2016-07-13 and 0.4.2 dated 2017-01-17
DESCRIPTION | 12 ++++++------ MD5 | 8 ++++---- R/explanations.R | 26 ++++++++++++++------------ R/problem.R | 24 ++++++++++++------------ man/rorutadis-package.Rd | 11 +++++------ 5 files changed, 41 insertions(+), 40 deletions(-)
Title: Community Ecology Package
Description: Ordination methods, diversity analysis and other
functions for community and vegetation ecologists.
Author: Jari Oksanen, F. Guillaume Blanchet, Michael Friendly, Roeland Kindt,
Pierre Legendre, Dan McGlinn, Peter R. Minchin, R. B. O'Hara,
Gavin L. Simpson, Peter Solymos, M. Henry H. Stevens, Eduard Szoecs,
Helene Wagner
Maintainer: Jari Oksanen <jari.oksanen@oulu.fi>
Diff between vegan versions 2.4-1 dated 2016-09-07 and 2.4-2 dated 2017-01-17
vegan-2.4-1/vegan/R/ordiGetData.R |only vegan-2.4-1/vegan/inst/ChangeLog |only vegan-2.4-2/vegan/DESCRIPTION | 8 +- vegan-2.4-2/vegan/MD5 | 83 +++++++++++------------ vegan-2.4-2/vegan/R/adonis2.R | 5 - vegan-2.4-2/vegan/R/betadisper.R | 2 vegan-2.4-2/vegan/R/bioenv.formula.R | 8 +- vegan-2.4-2/vegan/R/capscale.R | 19 ++--- vegan-2.4-2/vegan/R/cca.formula.R | 5 - vegan-2.4-2/vegan/R/dbrda.R | 17 ++-- vegan-2.4-2/vegan/R/envfit.formula.R | 6 - vegan-2.4-2/vegan/R/fitted.capscale.R | 2 vegan-2.4-2/vegan/R/hierParseFormula.R | 10 +- vegan-2.4-2/vegan/R/intersetcor.R | 13 ++- vegan-2.4-2/vegan/R/make.commsim.R | 59 +++++++--------- vegan-2.4-2/vegan/R/ordicluster.R | 4 - vegan-2.4-2/vegan/R/permutest.cca.R | 18 +++-- vegan-2.4-2/vegan/R/predict.rda.R | 2 vegan-2.4-2/vegan/R/rda.formula.R | 13 +-- vegan-2.4-2/vegan/R/scores.cca.R | 5 + vegan-2.4-2/vegan/R/scores.rda.R | 5 + vegan-2.4-2/vegan/R/simulate.rda.R | 3 vegan-2.4-2/vegan/R/stressplot.wcmdscale.R | 2 vegan-2.4-2/vegan/R/tabasco.R | 49 +++++++++---- vegan-2.4-2/vegan/R/tolerance.cca.R | 88 ++++++++++++++----------- vegan-2.4-2/vegan/build/partial.rdb |binary vegan-2.4-2/vegan/data/dune.taxon.rda |binary vegan-2.4-2/vegan/inst/NEWS.Rd | 86 ++++++++++++++++++++++++ vegan-2.4-2/vegan/inst/OldChangeLog |only vegan-2.4-2/vegan/inst/doc/decision-vegan.pdf |binary vegan-2.4-2/vegan/inst/doc/diversity-vegan.pdf |binary vegan-2.4-2/vegan/inst/doc/intro-vegan.pdf |binary vegan-2.4-2/vegan/inst/doc/partitioning.pdf |binary vegan-2.4-2/vegan/man/anova.cca.Rd | 8 +- vegan-2.4-2/vegan/man/betadisper.Rd | 2 vegan-2.4-2/vegan/man/capscale.Rd | 7 - vegan-2.4-2/vegan/man/dune.taxon.Rd | 26 +++++-- vegan-2.4-2/vegan/man/envfit.Rd | 18 ++++- vegan-2.4-2/vegan/man/plot.cca.Rd | 23 ++++-- vegan-2.4-2/vegan/man/tolerance.Rd | 7 + vegan-2.4-2/vegan/man/vegan-internal.Rd | 6 - vegan-2.4-2/vegan/man/vegemite.Rd | 18 ++++- vegan-2.4-2/vegan/src/nestedness.c | 2 vegan-2.4-2/vegan/src/vegdist.c | 32 ++++----- 44 files changed, 416 insertions(+), 245 deletions(-)
Title: R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3)
Description: Protocol Buffers are a way of encoding structured data in an
efficient yet extensible format. Google uses Protocol Buffers for almost all
of its internal 'RPC' protocols and file formats. Additional documentation
is available in two included vignettes one of which corresponds to our paper
in the Journal of Statistical Software (2016, v71i02). Either version 2 or 3
of the 'Protocol Buffers' 'API' is supported.
Author: Romain Francois, Dirk Eddelbuettel, Murray Stokely and Jeroen Ooms
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RProtoBuf versions 0.4.7 dated 2016-10-29 and 0.4.8 dated 2017-01-17
ChangeLog | 10 ++++++++++ DESCRIPTION | 12 ++++++------ MD5 | 24 +++++++++++++----------- build/vignette.rds |binary inst/NEWS.Rd | 7 +++++++ inst/doc/RProtoBuf-intro.pdf |binary inst/doc/RProtoBuf-paper.pdf |binary inst/doc/RProtoBuf-quickref.pdf |binary inst/doc/RProtoBuf-unitTests.pdf |binary inst/unitTests/data/proto3.proto |only inst/unitTests/runit.proto3.R |only src/Makevars.win | 8 +++++--- tools/winlibs.R | 8 ++++---- vignettes/figures/fig-SER.pdf |binary 14 files changed, 45 insertions(+), 24 deletions(-)
Title: Fast n-Gram 'Tokenization'
Description: An n-gram is a sequence of n "words" taken, in order, from a
body of text. This is a collection of utilities for creating,
displaying, summarizing, and "babbling" n-grams. The
'tokenization' and "babbling" are handled by very efficient C
code, which can even be built as its own standalone library.
The babbler is a simple Markov chain. The package also offers
a vignette with complete example 'workflows' and information about
the utilities offered in the package.
Author: Drew Schmidt [aut, cre],
Christian Heckendorf [aut]
Maintainer: Drew Schmidt <wrathematics@gmail.com>
Diff between ngram versions 3.0.1 dated 2016-07-13 and 3.0.2 dated 2017-01-17
ChangeLog | 6 +++++ DESCRIPTION | 18 ++++++++-------- MD5 | 51 ++++++++++++++++++++++++---------------------- NAMESPACE | 1 R/babble.r | 6 ++--- R/checks.r |only R/getters.r | 5 +--- R/multiread.r | 12 +++++----- R/ngram-package.R | 2 - R/ngram.r | 6 ++--- R/ngram_asweka.r | 8 +++---- R/phrasetable.r | 3 +- R/preprocess.r | 10 ++++----- R/print.r | 3 -- R/rcorpus.r | 8 +++---- R/splitter.r | 10 ++++----- R/string.summary.r | 8 +++---- README.md | 4 +-- inst/doc |only src/asweka.c | 1 src/count.c | 3 -- src/ngram/src/gen.c | 2 - src/ngram/src/process.c | 3 -- src/phrase_table.c | 6 +---- vignettes/build_pdf.sh | 4 +-- vignettes/cover/cover.pdf |binary vignettes/ngram-guide.Rnw | 6 ++--- 27 files changed, 93 insertions(+), 93 deletions(-)
Title: Microbial Pan-Genome Analysis
Description: A collection of functions for computations and visualizations of
microbial pan-genomes.
Author: Lars Snipen and Kristian Hovde Liland
Maintainer: Lars Snipen <lars.snipen@nmbu.no>
Diff between micropan versions 1.1.1 dated 2017-01-09 and 1.1.2 dated 2017-01-17
DESCRIPTION | 8 ++++---- MD5 | 8 +++++--- R/entrez.R | 13 ++++++++++++- inst/doc/vignette.pdf |binary vignettes/vignette-concordance.tex |only vignettes/vignette.tex |only 6 files changed, 21 insertions(+), 8 deletions(-)
Title: Methods for Taxonomic Classification of Prokaryotes
Description: Functions for assigning 16S sequence data to a
taxonomic level in the tree-of-life for prokaryotes.
Author: Kristian Hovde Liland, Hilde Vinje, Lars Snipen
Maintainer: Lars Snipen <lars.snipen@nmbu.no>
Diff between microclass versions 1.0.1 dated 2016-09-08 and 1.1 dated 2017-01-17
microclass-1.0.1/microclass/inst/extdata/contax.trim.rda |only microclass-1.1/microclass/DESCRIPTION | 10 ++++++---- microclass-1.1/microclass/MD5 | 8 ++++++-- microclass-1.1/microclass/build |only microclass-1.1/microclass/inst/doc |only microclass-1.1/microclass/vignettes |only 6 files changed, 12 insertions(+), 6 deletions(-)
Title: Multilevel Modeling of Dendroclimatical Fluctuations
Description: Multilevel ecological data series (MEDS) are sequences of observations ordered according to temporal/spatial hierarchies that are defined by sample designs, with sample variability confined to ecological factors. Dendroclimatic MEDS of tree rings and climate are modeled into normalized fluctuations of tree growth and aridity. Modeled fluctuations (model frames) are compared with Mantel correlograms on multiple levels defined by sample design. Package implementation can be understood by running examples in modelFrame(), and muleMan() functions.
Author: Wilson Lara <wilarhen@gmail.com>, Felipe Bravo <fbravo@pvs.uva.es>
Maintainer: Wilson Lara <wilarhen@gmail.com>
Diff between BIOdry versions 0.3 dated 2016-02-10 and 0.4 dated 2017-01-17
BIOdry-0.3/BIOdry/R/ringLme.R |only BIOdry-0.3/BIOdry/man/ringLme.Rd |only BIOdry-0.4/BIOdry/DESCRIPTION | 10 +- BIOdry-0.4/BIOdry/MD5 | 97 +++++++++++-------- BIOdry-0.4/BIOdry/NAMESPACE | 2 BIOdry-0.4/BIOdry/NEWS | 10 ++ BIOdry-0.4/BIOdry/R/R |only BIOdry-0.4/BIOdry/R/amod.R | 105 ++++++++++++--------- BIOdry-0.4/BIOdry/R/arguSelect.R | 31 +++--- BIOdry-0.4/BIOdry/R/colclass.R | 16 +-- BIOdry-0.4/BIOdry/R/frametoLme.R |only BIOdry-0.4/BIOdry/R/levexp.R | 16 +-- BIOdry-0.4/BIOdry/R/lmeForm.R | 64 ++++++++----- BIOdry-0.4/BIOdry/R/modelFrame.R | 65 +++++++------ BIOdry-0.4/BIOdry/R/moveYr.R | 61 ++++++------ BIOdry-0.4/BIOdry/R/muleMan.R | 156 +++++++++++++++----------------- BIOdry-0.4/BIOdry/R/ringApply.R | 66 ++++++++----- BIOdry-0.4/BIOdry/R/rtimes.R | 22 ++-- BIOdry-0.4/BIOdry/R/scacum.R | 28 +++-- BIOdry-0.4/BIOdry/R/shiftFrame.R | 83 ++++++++--------- BIOdry-0.4/BIOdry/R/splitFrame.R | 57 ++++++----- BIOdry-0.4/BIOdry/R/tdForm.R | 56 +++++++---- BIOdry-0.4/BIOdry/R/wlai.R | 32 ++++-- BIOdry-0.4/BIOdry/build/partial.rdb |binary BIOdry-0.4/BIOdry/man/BIOdry-package.Rd | 13 -- BIOdry-0.4/BIOdry/man/PTclim05.Rd | 22 ++-- BIOdry-0.4/BIOdry/man/Pradii03.Rd | 26 +++-- BIOdry-0.4/BIOdry/man/Prings05.Rd | 41 ++++---- BIOdry-0.4/BIOdry/man/amod.Rd | 34 +++++- BIOdry-0.4/BIOdry/man/arguSelect.Rd | 29 +++-- BIOdry-0.4/BIOdry/man/colclass.Rd | 16 +-- BIOdry-0.4/BIOdry/man/frametoLme.Rd |only BIOdry-0.4/BIOdry/man/levexp.Rd | 16 +-- BIOdry-0.4/BIOdry/man/lmeForm.Rd | 55 ++++++----- BIOdry-0.4/BIOdry/man/modelFrame.Rd | 56 ++++++----- BIOdry-0.4/BIOdry/man/moveYr.Rd | 29 +++-- BIOdry-0.4/BIOdry/man/muleMan.Rd | 32 +++--- BIOdry-0.4/BIOdry/man/ringApply.Rd | 51 ++++++---- BIOdry-0.4/BIOdry/man/rtimes.Rd | 15 +-- BIOdry-0.4/BIOdry/man/scacum.Rd | 25 +++-- BIOdry-0.4/BIOdry/man/shiftFrame.Rd | 76 +++++++-------- BIOdry-0.4/BIOdry/man/splitFrame.Rd | 29 +++-- BIOdry-0.4/BIOdry/man/tdForm.Rd | 43 +++++--- BIOdry-0.4/BIOdry/man/wlai.Rd | 17 ++- 44 files changed, 920 insertions(+), 682 deletions(-)
Title: Mango Solutions Training Datasets
Description: Datasets designed to be used in conjunction with Mango Solutions
training materials and the book SAMS Teach Yourself R in 24 Hours (ISBN: 978-0-672-33848-9).
Author: Mango Solutions <rin24hours@mango-solutions.com>
Maintainer: Aimee Gott <agott@mango-solutions.com>
Diff between mangoTraining versions 1.0-6 dated 2015-12-18 and 1.0-7 dated 2017-01-17
DESCRIPTION | 8 ++++---- MD5 | 8 ++++++-- NAMESPACE | 2 ++ R/emaxFun.R |only R/logisticFun.R |only man/emaxFun.Rd |only man/logisticFun.Rd |only 7 files changed, 12 insertions(+), 6 deletions(-)
Title: Support for Linear Models
Description: Provides tools and a consistent interface to support analyses using General, Generalized, and Multi-level Linear Models.
Author: John Curtin <jjcurtin@wisc.edu>
Maintainer: John Curtin <jjcurtin@wisc.edu>
Diff between lmSupport versions 2.9.4 dated 2016-04-20 and 2.9.8 dated 2017-01-17
DESCRIPTION | 15 ++++++--------- MD5 | 40 ++++++++++++++++++++++++++++++++++------ NAMESPACE | 22 +++++++++++++++++++--- R/figAxis.R |only R/figBarPlot.R |only R/figErrBars.R |only R/figLabDefaults.R |only R/figLayout.R |only R/figLegend.R |only R/figLines.R |only R/figNewDevice.R |only R/figPlotRegion.R |only R/figPoints.R |only R/figSetDefaults.R |only R/figStripChart.R | 13 ++++++++++--- R/figText.R |only R/modelPower.R |only R/modelRmd.R |only R/varMarkdown.R | 13 +++++++++---- R/varPlot.R | 2 +- man/figAxis.Rd |only man/figBarPlot.Rd |only man/figErrBars.Rd |only man/figLabDefaults.Rd |only man/figLayout.rd |only man/figLegend.Rd |only man/figLines.Rd |only man/figNewDevice.Rd |only man/figPlotRegion.Rd |only man/figPoints.Rd |only man/figSetDefaults.Rd |only man/figStripChart.Rd | 20 +++++++++++--------- man/figText.Rd |only man/modelPower.Rd |only man/modelRmd.Rd |only 35 files changed, 90 insertions(+), 35 deletions(-)
Title: Download Data from the International Monetary Fund's Data API
Description: Explore and download data from the International Monetary Fund's
data API <http://data.imf.org/>.
Author: Christopher Gandrud [aut, cre]
Maintainer: Christopher Gandrud <christopher.gandrud@gmail.com>
Diff between imfr versions 0.1.2 dated 2016-12-22 and 0.1.3 dated 2017-01-17
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- NAMESPACE | 1 + NEWS | 5 +++++ R/utils.R | 4 ++-- README.md | 8 ++++++-- 6 files changed, 23 insertions(+), 13 deletions(-)
Title: Full Interactive GUI for Dynamic Biplot in R
Description: A GUI to solve dynamic biplots and classical biplot. Try matrices
of 2-way and 3-way. The GUI can be run in multiple languages.
Author: Jaime Egido [aut, cre]
Maintainer: Jaime Egido <jegido@usal.es>
Diff between dynBiplotGUI versions 1.1.3 dated 2015-04-27 and 1.1.4 dated 2017-01-17
ChangeLog | 13 +++++++ DESCRIPTION | 15 ++++---- MD5 | 10 ++--- NAMESPACE | 7 +++ R/dynBiplot.R | 89 ++++++++++++++++++++----------------------------- inst/lang/Language.csv | 1 6 files changed, 72 insertions(+), 63 deletions(-)
Title: Using Keel in R Code
Description: KEEL is a popular Java software for a large number of different knowledge data discovery tasks.
This package takes the advantages of KEEL and R, allowing to use KEEL algorithms in simple R code.
The implemented R code layer between R and KEEL makes easy both using KEEL algorithms in R as implementing new algorithms for 'RKEEL' in a very simple way.
It includes more than 100 algorithms for classification, regression and preprocess, which allows a more complete experimentation process.
For more information about KEEL, see <http://www.keel.es/>.
Author: Jose M. Moyano [aut, cre], Luciano Sanchez Ramos [aut], Oliver Sanchez Marin [ctb]
Maintainer: Jose M. Moyano <i02momuj@uco.es>
Diff between RKEEL versions 1.1.15 dated 2017-01-11 and 1.1.17 dated 2017-01-17
DESCRIPTION | 10 MD5 | 12 R/AssociationRulesAlgorithm.R | 1027 +++++++++++++++++++++--------------------- R/ClassificationAlgorithm.R | 534 ++++++++++----------- R/KeelAlgorithm.R | 5 R/PreprocessAlgorithm.R | 4 R/RegressionAlgorithm.R | 4 7 files changed, 801 insertions(+), 795 deletions(-)
Title: Function Collection Related to Plotting and Hydrology
Description: Draw horizontal histograms, color scattered points by 3rd dimension,
enhance date- and log-axis plots, zoom in X11 graphics, trace errors and warnings,
use the unit hydrograph in a linear storage cascade, convert lists to data.frames and arrays,
fit multiple functions.
Author: Berry Boessenkool
Maintainer: Berry Boessenkool <berry-b@gmx.de>
Diff between berryFunctions versions 1.13.0 dated 2016-12-10 and 1.14.0 dated 2017-01-17
DESCRIPTION | 10 MD5 | 222 ++++++++-------- NAMESPACE | 1 NEWS | 21 + R/approx2.R | 6 R/climateGraph.R | 196 +++++++------- R/createFun.R | 8 R/exTime.R | 84 +++--- R/gof.R | 22 + R/googleLink2pdf.R | 21 + R/l2array.R | 109 +++++--- R/logHist.R | 30 +- R/tryStack.R | 240 +++++++++++------- build/vignette.rds |binary inst/doc/berryFunctions.html | 40 +-- inst/extdata/solitaire.txt | 1 man/TFtest.Rd | 80 +++--- man/addAlpha.Rd | 86 +++--- man/addFade.Rd | 86 +++--- man/addRows.Rd | 70 ++--- man/anhang.Rd | 54 ++-- man/approx2.Rd | 118 ++++---- man/around.Rd | 84 +++--- man/berryFunctions-package.Rd | 88 +++--- man/betaPlot.Rd | 148 +++++------ man/betaPlotComp.Rd | 126 ++++----- man/checkFile.Rd | 120 ++++----- man/ci.Rd | 114 ++++---- man/ciBand.Rd | 188 +++++++------- man/circle.Rd | 96 +++---- man/classify.Rd | 148 +++++------ man/climateGraph.Rd | 134 +++++----- man/colPoints.Rd | 440 ++++++++++++++++----------------- man/colPointsHist.Rd | 164 ++++++------ man/colPointsLegend.Rd | 248 +++++++++--------- man/combineFiles.Rd | 116 ++++---- man/compareFiles.Rd | 86 +++--- man/convertUmlaut.Rd | 76 ++--- man/createFun.Rd | 72 ++--- man/dataDWD.Rd | 150 +++++------ man/dataStr.Rd | 68 ++--- man/distance.Rd | 100 +++---- man/divPal.Rd | 100 +++---- man/dupes.Rd | 132 ++++----- man/exTime.Rd | 32 +- man/exp4p.Rd | 132 ++++----- man/expReg.Rd | 176 ++++++------- man/funSource.Rd | 96 +++---- man/funTinn.Rd | 62 ++-- man/funnelPlot.Rd | 310 +++++++++++------------ man/getColumn.Rd | 158 +++++------ man/getName.Rd | 100 +++---- man/gof.Rd | 17 + man/googleLink2pdf.Rd | 11 man/groupHist.Rd | 106 +++---- man/headtail.Rd | 138 +++++----- man/horizHist.Rd | 164 ++++++------ man/insertRows.Rd | 124 ++++----- man/instGit.Rd | 108 ++++---- man/is.error.Rd | 84 +++--- man/l2array.Rd | 92 +++++- man/l2df.Rd | 128 ++++----- man/library2.Rd | 84 +++--- man/lim0.Rd | 116 ++++---- man/linLogHist.Rd | 196 +++++++------- man/linLogTrans.Rd | 302 +++++++++++----------- man/linReg.Rd | 182 ++++++------- man/locArrow.Rd | 84 +++--- man/locLine.Rd | 80 +++--- man/logAxis.Rd | 206 +++++++-------- man/logHist.Rd | 16 + man/logSpaced.Rd | 110 ++++---- man/logVals.Rd | 158 +++++------ man/lsMem.Rd | 82 +++--- man/lsc.Rd | 308 +++++++++++------------ man/mReg.Rd | 560 +++++++++++++++++++++--------------------- man/monthAxis.Rd | 258 +++++++++---------- man/monthLabs.Rd | 100 +++---- man/movAv.Rd | 222 ++++++++-------- man/movAvLines.Rd | 96 +++---- man/na9.Rd | 90 +++--- man/nameSample.Rd | 134 +++++----- man/normPlot.Rd | 142 +++++----- man/owa.Rd | 164 ++++++------ man/panelDim.Rd | 170 ++++++------ man/pretty2.Rd | 94 +++---- man/quantileBands.Rd | 162 ++++++------ man/quantileMean.Rd | 222 ++++++++-------- man/rainbow2.Rd | 78 ++--- man/readDWD.Rd | 78 ++--- man/removeSpace.Rd | 98 +++---- man/rescale.Rd | 84 +++--- man/runAxis.Rd | 80 +++--- man/seasonality.Rd | 318 +++++++++++------------ man/seqPal.Rd | 128 ++++----- man/seqR.Rd | 88 +++--- man/showPal.Rd | 60 ++-- man/smallPlot.Rd | 332 ++++++++++++------------ man/smoothLines.Rd | 114 ++++---- man/sortDF.Rd | 80 +++--- man/spiralDate.Rd | 194 +++++++------- man/spiralDateAnim.Rd | 120 ++++----- man/superPos.Rd | 192 +++++++------- man/tableColVal.Rd | 164 ++++++------ man/textField.Rd | 292 ++++++++++----------- man/timer.Rd | 86 +++--- man/toupper1.Rd | 66 ++-- man/traceCall.Rd | 92 +++--- man/truncMessage.Rd | 86 +++--- man/tryStack.Rd | 39 +- man/unitHydrograph.Rd | 150 +++++------ man/yearSample.Rd | 74 ++--- 112 files changed, 7123 insertions(+), 6849 deletions(-)
More information about berryFunctions at CRAN
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Title: Time Series Analysis and Computational Finance
Description: Time series analysis and computational finance.
Author: Adrian Trapletti [aut],
Kurt Hornik [aut, cre],
Blake LeBaron [ctb] (BDS test code)
Maintainer: Kurt Hornik <Kurt.Hornik@R-project.org>
Diff between tseries versions 0.10-36 dated 2016-12-15 and 0.10-37 dated 2017-01-17
DESCRIPTION | 6 +++--- MD5 | 21 +++++++++++---------- NAMESPACE | 2 +- R/arma.R | 10 ++++------ R/garch.R | 20 ++++++++------------ R/test.R | 20 ++++++++------------ R/tsutils.R | 10 ++++------ src/arma.c | 4 ++-- src/bdstest.c | 2 +- src/boot.c | 2 +- src/garch.c | 10 +++++----- src/init.c |only 12 files changed, 48 insertions(+), 59 deletions(-)
Title: Functions for Handling Dates
Description: Functions for handling dates.
Author: Terry Therneau [aut],
Thomas Lumley [trl] (R port),
Kjetil Halvorsen [trl] (R port),
Kurt Hornik [trl, ctb, cre] (R port)
Maintainer: Kurt Hornik <Kurt.Hornik@R-project.org>
Diff between date versions 1.2-35 dated 2016-12-08 and 1.2-36 dated 2017-01-17
ChangeLog | 9 +++++++++ DESCRIPTION | 6 +++--- MD5 | 11 ++++++----- NAMESPACE | 2 +- R/date.R | 7 +++---- src/char_date.c | 10 ++-------- src/init.c |only 7 files changed, 24 insertions(+), 21 deletions(-)
Title: Chronological Objects which can Handle Dates and Times
Description: Provides chronological objects which can handle dates and times.
Author: David James [aut] (S original),
Kurt Hornik [aut, trl, cre],
Gabor Grothendieck [ctb]
Maintainer: Kurt Hornik <Kurt.Hornik@R-project.org>
Diff between chron versions 2.3-48 dated 2016-12-08 and 2.3-49 dated 2017-01-17
ChangeLog | 9 +++++++++ DESCRIPTION | 8 ++++---- MD5 | 16 ++++++++-------- NAMESPACE | 2 +- R/utils.R | 16 +++++++--------- src/Rchron.h | 6 ++++-- src/chron_strs.c | 4 ++-- src/init.c | 12 ++++++------ src/unpaste.c | 4 ++-- 9 files changed, 43 insertions(+), 34 deletions(-)
Title: Convex Clustering Methods and Clustering Indexes
Description: Convex Clustering methods, including K-means algorithm,
On-line Update algorithm (Hard Competitive Learning) and Neural Gas
algorithm (Soft Competitive Learning), and calculation of several
indexes for finding the number of clusters in a data set.
Author: Evgenia Dimitriadou [aut],
Kurt Hornik [ctb, cre]
Maintainer: Kurt Hornik <Kurt.Hornik@R-project.org>
Diff between cclust versions 0.6-20 dated 2015-06-24 and 0.6-21 dated 2017-01-17
DESCRIPTION | 6 ++-- MD5 | 9 +++--- NAMESPACE | 2 - R/Rindexes.R | 12 -------- R/cclust.R | 82 ++++++++++++++++++++++++++++++----------------------------- src/init.c |only 6 files changed, 52 insertions(+), 59 deletions(-)
Title: Tableplot, a Visualization of Large Datasets
Description: A tableplot is a visualisation of a (large) dataset with a dozen of variables, both numeric and categorical. Each column represents a variable and each row bin is an aggregate of a certain number of records. Numeric variables are visualized as bar charts, and categorical variables as stacked bar charts. Missing values are taken into account. Also supports large 'ffdf' datasets from the 'ff' package.
Author: Martijn Tennekes and Edwin de Jonge
Maintainer: Martijn Tennekes <mtennekes@gmail.com>
Diff between tabplot versions 1.3 dated 2016-03-26 and 1.3-1 dated 2017-01-17
.Rinstignore |only DESCRIPTION | 17 ++++----------- MD5 | 46 +++++++++++++++++++++-------------------- NEWS | 4 +++ R/datetime2fac.R | 2 - R/num2fac.R | 2 - R/pkg.R | 7 ------ R/plot_tabplot.r | 23 +++++--------------- R/scaleNumCol.R | 12 +++++----- R/tableChange.R | 2 - R/tablePalettes.R | 2 - R/tablePrepare.R | 2 - R/tableplot.R | 25 +++++++++++++++++----- R/tableplot_processCols.R | 8 ++++--- R/tableplots_diff.R | 2 - build/createpalette.R |only build/roxygen.R |only build/vignette.rds |binary inst/doc/tabplot-timings.R | 4 +-- inst/doc/tabplot-timings.Rmd | 5 +--- inst/doc/tabplot-timings.html | 21 +++++++++++------- inst/doc/tabplot-vignette.html | 32 ++++++++++++++-------------- man/plot.tabplot.Rd | 16 +------------- man/tablePalettes.Rd | 2 - man/tableplot.Rd | 24 ++++++++++++++++----- vignettes/tabplot-timings.Rmd | 5 +--- 26 files changed, 133 insertions(+), 130 deletions(-)
Title: Bayesian Applied Regression Modeling via Stan
Description: Estimates pre-compiled regression models using the 'rstan' package, which provides
the R interface to the Stan C++ library for Bayesian estimation. Users specify models via the
customary R syntax with a formula and data.frame plus some additional arguments for priors.
Author: Jonah Gabry [aut],
Trustees of Columbia University [cph],
R Core Deveopment Team [cph] (R/stan_aov.R),
Douglas Bates [cph] (R/pp_data.R),
Martin Maechler [cph] (R/pp_data.R),
Ben Bolker [cph] (R/pp_data.R),
Steve Walker [cph] (R/pp_data.R),
Brian Ripley [cph] (R/stan_aov.R, R/stan_polr.R),
William Venables [cph] (R/stan_polr.R),
Ben Goodrich [cre, aut]
Maintainer: Ben Goodrich <benjamin.goodrich@columbia.edu>
Diff between rstanarm versions 2.13.1 dated 2016-11-20 and 2.14.1 dated 2017-01-17
DESCRIPTION | 21 MD5 | 274 - NAMESPACE | 19 R/as.matrix.stanreg.R | 4 R/data_block.R | 42 R/gamm4_to_glmer.R | 4 R/log_lik.R | 261 + R/loo.R | 634 +-- R/misc.R | 55 R/neg_binomial_2.R | 3 R/plots.R | 365 + R/posterior_interval.R | 42 R/posterior_linpred.R | 73 R/posterior_predict.R | 36 R/posterior_vs_prior.R | 6 R/pp_check.R | 33 R/pp_data.R | 36 R/pp_validate.R | 2 R/predictive_error.R | 89 R/predictive_interval.R | 62 R/print-and-summary.R | 39 R/prior_summary.R | 316 + R/priors.R | 229 - R/rstanarm-deprecated.R |only R/rstanarm-package.R | 64 R/stan_betareg.R |only R/stan_betareg.fit.R |only R/stan_biglm.R | 109 R/stan_biglm.fit.R | 23 R/stan_gamm4.R | 164 R/stan_glm.R | 57 R/stan_glm.fit.R | 365 + R/stan_glmer.R | 42 R/stan_lm.R | 1 R/stan_polr.R | 20 R/stan_polr.fit.R | 9 R/stanreg-methods.R | 157 R/stanreg-objects.R | 8 R/stanreg.R | 46 build/vignette.rds |binary cleanup | 5 cleanup.win | 7 exec/bernoulli.stan | 142 exec/binomial.stan | 115 exec/continuous.stan | 401 - exec/count.stan | 152 exec/lm.stan | 11 exec/polr.stan | 81 inst/CITATION |only inst/NEWS | 26 inst/chunks/Columbia_copyright.stan |only inst/chunks/NKX.stan | 2 inst/chunks/bernoulli_likelihoods.stan |only inst/chunks/binomial_likelihoods.stan |only inst/chunks/common_functions.stan | 146 inst/chunks/continuous_likelihoods.stan |only inst/chunks/count_likelihoods.stan |only inst/chunks/data_betareg.stan |only inst/chunks/data_glm.stan | 8 inst/chunks/eta_add_Zb.stan |only inst/chunks/eta_z_no_intercept.stan |only inst/chunks/glmer_stuff2.stan | 9 inst/chunks/hyperparameters.stan | 7 inst/chunks/license.stan | 3 inst/chunks/make_eta_bern.stan | 6 inst/chunks/make_eta_z.stan |only inst/chunks/parameters_betareg.stan |only inst/chunks/parameters_glm.stan | 4 inst/chunks/priors_betareg.stan |only inst/chunks/priors_glm.stan | 28 inst/chunks/tdata_betareg.stan |only inst/chunks/tdata_glm.stan | 27 inst/chunks/tparameters_betareg.stan |only inst/chunks/tparameters_glm.stan | 46 inst/chunks/weights_offset.stan | 4 inst/doc/aov.R | 18 inst/doc/aov.html | 24 inst/doc/betareg.R |only inst/doc/betareg.Rmd |only inst/doc/betareg.html |only inst/doc/binomial.R | 26 inst/doc/binomial.Rmd | 11 inst/doc/binomial.html | 48 inst/doc/children/SETTINGS-gg.txt | 6 inst/doc/children/SETTINGS-knitr.txt | 12 inst/doc/continuous.R | 44 inst/doc/continuous.Rmd | 26 inst/doc/continuous.html | 66 inst/doc/count.R | 24 inst/doc/count.Rmd | 8 inst/doc/count.html | 16 inst/doc/glmer.R | 18 inst/doc/glmer.html | 6 inst/doc/lm.R | 25 inst/doc/lm.Rmd | 7 inst/doc/lm.html | 68 inst/doc/polr.R | 18 inst/doc/polr.html | 44 inst/doc/pooling.R | 40 inst/doc/pooling.Rmd | 42 inst/doc/pooling.html | 193 inst/doc/rstanarm.R | 24 inst/doc/rstanarm.Rmd | 6 inst/doc/rstanarm.html | 75 man/loo.stanreg.Rd | 226 - man/neg_binomial_2.Rd | 3 man/pairs.stanreg.Rd | 88 man/plot.stanreg.Rd | 19 man/posterior_linpred.Rd | 11 man/posterior_vs_prior.Rd | 6 man/pp_check.stanreg.Rd | 22 man/predictive_error.stanreg.Rd | 14 man/predictive_interval.stanreg.Rd | 8 man/prior_summary.stanreg.Rd | 88 man/priors.Rd | 191 man/rstanarm-deprecated.Rd |only man/rstanarm-package.Rd | 59 man/stan_betareg.Rd |only man/stan_biglm.Rd | 111 man/stan_gamm4.Rd | 149 man/stan_glm.Rd | 161 man/stan_glmer.Rd | 135 man/stan_polr.Rd | 7 man/stanreg-objects.Rd | 6 src/Makevars | 3 src/Makevars.win | 3 src/include/models.hpp | 6749 +++++++++++++++++++++++--------- tests/testthat/test_loo.R | 264 - tests/testthat/test_methods.R | 259 - tests/testthat/test_misc.R | 74 tests/testthat/test_plots.R | 50 tests/testthat/test_posterior_predict.R | 118 tests/testthat/test_pp_check.R | 45 tests/testthat/test_pp_validate.R | 6 tests/testthat/test_predict.R | 66 tests/testthat/test_stan_betareg.R |only tests/testthat/test_stan_functions.R | 49 tests/testthat/test_stan_glm.R | 134 tests/testthat/test_stan_glmer.R | 113 tests/testthat/test_stan_lm.R | 31 tests/testthat/test_stan_polr.R | 35 vignettes/betareg.Rmd |only vignettes/binomial.Rmd | 11 vignettes/children/SETTINGS-gg.txt | 6 vignettes/children/SETTINGS-knitr.txt | 12 vignettes/continuous.Rmd | 26 vignettes/count.Rmd | 8 vignettes/lm.Rmd | 7 vignettes/pooling.Rmd | 42 vignettes/rstanarm.Rmd | 6 150 files changed, 10204 insertions(+), 5052 deletions(-)
Title: Extended Structural Equation Modelling
Description: Facilitates treatment of statistical model specifications as things
that can be generated and manipulated programmatically. Structural equation
models may be specified with reticular action model matrices or paths, linear
structural relations matrices or paths, or directly in matrix algebra. Fit
functions include full information maximum likelihood, maximum likelihood, and
weighted least squares. Example models include confirmatory factor, multiple
group, mixture distribution, categorical threshold, modern test theory,
differential equations, state space, and many others.
Author: Steven M. Boker [aut],
Michael C. Neale [aut],
Hermine H. Maes [aut],
Michael J. Wilde [ctb],
Michael Spiegel [aut],
Timothy R. Brick [aut],
Ryne Estabrook [aut],
Timothy C. Bates [aut],
Paras Mehta [ctb],
Timo von Oertzen [ctb],
Ross J. Gore [aut],
Michael D. Hunter [aut],
Daniel C. Hackett [ctb],
Julian Karch [ctb],
Andreas M. Brandmaier [ctb],
Joshua N. Pritikin [aut, cre],
Mahsa Zahery [aut],
Robert M. Kirkpatrick [aut],
Yang Wang [ctb],
Charles Driver [ctb],
Massachusetts Institute of Technology [cph],
S. G. Johnson [cph],
Association for Computing Machinery [cph],
Dieter Kraft [cph],
Stefan Wilhelm [cph],
Manjunath B G [cph]
Maintainer: Joshua N. Pritikin <jpritikin@pobox.com>
Diff between OpenMx versions 2.7.3 dated 2017-01-14 and 2.7.4 dated 2017-01-17
DESCRIPTION | 8 MD5 | 49 +- R/MxDataWLS.R | 7 R/MxExpectationRAM.R | 12 R/MxFitFunctionWLS.R | 2 R/MxRunHelperFunctions.R | 58 +++ R/MxSaturatedModel.R | 67 +--- R/MxVersion.R | 2 inst/CITATION | 2 inst/models/enormous/rampart.R | 15 inst/models/nightly/RegimeSwitching_MatrixRawNoCholDifferentTransitions.R | 13 inst/models/passing/IntroSEM-OneFactorCov.R | 17 + inst/models/passing/jointFactorWls.R | 12 man/mxDataWLS.Rd | 10 src/Compute.h | 2 src/ComputeGD.cpp | 12 src/nanotimer.cpp |only src/nanotimer_gettime.h | 2 src/nanotimer_macosx.h | 2 src/nanotimer_rtposix.h | 2 src/nanotimer_windows.h | 2 src/nloptcpp.cpp | 167 ++++++---- src/omxDefines.h | 14 src/optimize.c | 8 src/slsqp.c | 28 + src/slsqp.h | 18 - 26 files changed, 353 insertions(+), 178 deletions(-)
Title: Normalisation of Multiple Variables in Large-Scale Datasets
Description: The robustness of many of the statistical techniques, such as factor analysis, applied in
the social sciences rests upon the assumption of item-level normality. However, when dealing
with real data, these assumptions are often not met. The Box-Cox transformation (Box & Cox, 1964)
<http://www.jstor.org/stable/2984418> provides an optimal transformation for non-normal variables. Yet, for
large datasets of continuous variables, its application in current software programs is cumbersome
with analysts having to take several steps to normalise each variable. We present an R package
'normalr' that enables researchers to make convenient optimal transformations of multiple variables
in datasets. This R package enables users to quickly and accurately: (1) anchor all of their
variables at 1.00, (2) select the desired precision with which the optimal lambda is estimated,
(3) apply each unique exponent to its variable, (4) rescale resultant values to within their
original X1 and X(n) ranges, and (5) provide original and transformed estimates of skewness,
kurtosis, and other inferential assessments of normality.
Author: Kevin Chang [aut, cre],
Matthew Courtney [aut]
Maintainer: Kevin Chang <k.chang@auckland.ac.nz>
Diff between normalr versions 0.0.2 dated 2017-01-09 and 0.0.3 dated 2017-01-17
DESCRIPTION | 6 +++--- MD5 | 10 +++++++--- NEWS.md | 3 +++ R/testData.R |only data |only inst/shiny-examples/normalr/app.R | 6 ++++-- inst/shiny-examples/normalr/rsconnect |only man/testData.Rd |only 8 files changed, 17 insertions(+), 8 deletions(-)
Title: Estimation of ICA Mixture Models
Description: The icamix package provides R functions as well as a C++ library which facilitate the estimation of ICA mixture models. We have developed and implemented the NSMM-ICA algorithm that currently integrates npEM and Fast-ICA for non-parametric estimation of ICA mixture models. We will continue to build in algorithms that interweave the EM step with other types of ICA techniques.
Author: Xiaotian Zhu, David R. Hunter
Maintainer: Xiaotian Zhu <xzhu@natera.com>
Diff between icamix versions 1.0.4 dated 2015-10-22 and 1.0.5 dated 2017-01-17
DESCRIPTION | 10 +++++----- MD5 | 6 +++--- R/RcppExports.R | 30 +++++++++++++++--------------- src/RcppExports.cpp | 26 +++++++++++++------------- 4 files changed, 36 insertions(+), 36 deletions(-)
Title: A Wrapper for the 'Highcharts' Library
Description: A wrapper for the 'Highcharts' library including
shortcut functions to plot R objects. 'Highcharts'
<http://www.highcharts.com/> is a charting library offering
numerous chart types with a simple configuration syntax.
Author: Joshua Kunst [aut, cre],
Nuno Agostinho [ctb] (hchart.survfit, densities and
hc_add_series_scatter),
Eduardo Flores [ctb] (First version hc_add_series_df_tidy),
Dean Kilfoyle [ctb] (First version hc_add_series_boxplot),
Adline Dsilva [ctb] (First version Matrix heatmap)
Maintainer: Joshua Kunst <jbkunst@gmail.com>
Diff between highcharter versions 0.4.0 dated 2016-07-14 and 0.5.0 dated 2017-01-17
highcharter-0.4.0/highcharter/R/export-hc.R |only highcharter-0.4.0/highcharter/R/hc-charts.R |only highcharter-0.4.0/highcharter/R/shortcuts-ts-xts.R |only highcharter-0.4.0/highcharter/R/shortcuts.R |only highcharter-0.4.0/highcharter/inst/htmlwidgets/lib/delaunay.js |only highcharter-0.4.0/highcharter/inst/htmlwidgets/lib/highcharts-4.2.4 |only highcharter-0.4.0/highcharter/inst/htmlwidgets/lib/underscore-1.8.3 |only highcharter-0.4.0/highcharter/man/colorize_vector.Rd |only highcharter-0.4.0/highcharter/man/hc_add_series_density.Rd |only highcharter-0.4.0/highcharter/man/hcwaffle.Rd |only highcharter-0.5.0/highcharter/DESCRIPTION | 13 highcharter-0.5.0/highcharter/MD5 | 321 +- highcharter-0.5.0/highcharter/NAMESPACE | 49 highcharter-0.5.0/highcharter/NEWS.md | 69 highcharter-0.5.0/highcharter/R/api-hc-extras.R | 90 highcharter-0.5.0/highcharter/R/api-hc-hc_add_series-deprecated.R |only highcharter-0.5.0/highcharter/R/api-hc-hc_add_series-shortcuts.R |only highcharter-0.5.0/highcharter/R/api-hc-hc_add_series.R |only highcharter-0.5.0/highcharter/R/api-hc-helpers.R |only highcharter-0.5.0/highcharter/R/api-hc.R | 95 highcharter-0.5.0/highcharter/R/assertthat.R | 14 highcharter-0.5.0/highcharter/R/data-citytemp.R | 5 highcharter-0.5.0/highcharter/R/data-favorite_bars.R | 5 highcharter-0.5.0/highcharter/R/data-favorite_pies.R | 5 highcharter-0.5.0/highcharter/R/data-globaltemp.R |only highcharter-0.5.0/highcharter/R/data-pokemon.R |only highcharter-0.5.0/highcharter/R/data-stars.R |only highcharter-0.5.0/highcharter/R/data-unemployment.R | 6 highcharter-0.5.0/highcharter/R/data-uscountygeojson.R | 5 highcharter-0.5.0/highcharter/R/data-usgeojson.R | 5 highcharter-0.5.0/highcharter/R/data-vaccines.R |only highcharter-0.5.0/highcharter/R/data-weather.R |only highcharter-0.5.0/highcharter/R/data-worldgeojson.R | 5 highcharter-0.5.0/highcharter/R/export_hc.R |only highcharter-0.5.0/highcharter/R/hchart-shorcuts.R |only highcharter-0.5.0/highcharter/R/hchart.R | 275 -- highcharter-0.5.0/highcharter/R/helpers.R | 459 +-- highcharter-0.5.0/highcharter/R/highcharter-package.R | 2 highcharter-0.5.0/highcharter/R/highcharter.R | 34 highcharter-0.5.0/highcharter/R/highmaps.R |only highcharter-0.5.0/highcharter/R/theme-538.R | 2 highcharter-0.5.0/highcharter/R/theme-darkunica.R | 2 highcharter-0.5.0/highcharter/R/theme-db.R | 8 highcharter-0.5.0/highcharter/R/theme-economist.R | 2 highcharter-0.5.0/highcharter/R/theme-elementary.R |only highcharter-0.5.0/highcharter/R/theme-ffx.R |only highcharter-0.5.0/highcharter/R/theme-flat.R | 73 highcharter-0.5.0/highcharter/R/theme-flatdark.R |only highcharter-0.5.0/highcharter/R/theme-ft.R | 2 highcharter-0.5.0/highcharter/R/theme-gridlight.R | 4 highcharter-0.5.0/highcharter/R/theme-monokai.R |only highcharter-0.5.0/highcharter/R/theme-sandsignika.R | 2 highcharter-0.5.0/highcharter/R/theme-smpl.R | 85 highcharter-0.5.0/highcharter/R/theme-tufte.R |only 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Title: Wilcoxon Rank Sum Test for Clustered Data
Description: Non-parametric tests (Wilcoxon rank sum test and Wilcoxon signed rank test) for clustered data.
Author: Yujing Jiang [aut, cre],
Mei-Ling Ting Lee [ctb],
Jun Yan [ctb]
Maintainer: Yujing Jiang <yujing.jiang@uconn.edu>
Diff between clusrank versions 0.5-1 dated 2017-01-01 and 0.5-2 dated 2017-01-17
DESCRIPTION | 8 ++-- MD5 | 28 ++++++++-------- R/RcppExports.R | 2 - R/amd.R | 2 - R/clusWilcox.R | 23 +++++++++++++ R/clusranksum.R | 45 +++++++++++++++++++------- R/clussignrank.R | 20 ++++++----- R/crd.R | 2 - R/crdstr.R | 2 - R/crsd.R | 2 - R/crsdunb.R | 2 - R/print.R | 23 +++++++++++++ R/recodeFun.R | 2 - R/special.R | 23 +++++++++++++ src/RcppExports.cpp | 90 ++++++++++++++++++++++++++-------------------------- 15 files changed, 185 insertions(+), 89 deletions(-)
Title: Bayesian Estimation of the ETAS Model for Earthquake Occurrences
Description: The Epidemic Type Aftershock Sequence (ETAS) model is one of the best-performing methods for modeling and forecasting earthquake occurrences. This package implements Bayesian estimation routines to draw samples from the full posterior distribution of the model parameters, given an earthquake catalog. The paper on which this package is based is Gordon J. Ross - Bayesian Estimation of the ETAS Model for Earthquake Occurrences (2016), available from the below URL.
Author: Gordon J. Ross
Maintainer: Gordon J. Ross <gordon@gordonjross.co.uk>
Diff between bayesianETAS versions 1.0 dated 2016-12-14 and 1.0.3 dated 2017-01-17
DESCRIPTION | 11 ++++++----- MD5 | 12 ++++++------ R/maxLikelihoodETAS.R | 2 +- man/bayesianETAS.Rd | 2 +- man/maxLikelihoodETAS.Rd | 2 +- man/sampleETASposterior.Rd | 2 +- man/simulateETAS.Rd | 2 +- 7 files changed, 17 insertions(+), 16 deletions(-)