Title: Seasonal/Sequential (Instants/Durations, Even or not) Time
Series
Description: Objects to manipulate sequential and seasonal time series. Sequential time series based on time instants and time durations are handled. Both can be regularly or unevenly spaced (overlapping durations are allowed). Only POSIX* format are used for dates and times. The following classes are provided : 'POSIXcti', 'POSIXctp', 'TimeIntervalDataFrame', 'TimeInstantDataFrame', 'SubtimeDataFrame' ; methods to switch from a class to another and to modify the time support of series (hourly time series to daily time series for instance) are also defined. Tools provided can be used for instance to handle environmental monitoring data (not always produced on a regular time base).
Author: Vladislav Navel
Maintainer: Vladislav Navel <vnavel@yahoo.fr>
Diff between timetools versions 1.8.1 dated 2017-02-01 and 1.9.1 dated 2017-02-04
DESCRIPTION | 10 +++++----- MD5 | 14 +++++++------- R/tapply.R | 8 ++++---- README | 28 ++++++++++++++++++---------- man/tapply.Rd | 9 ++++++--- man/timetools-package.Rd | 6 +++--- tests/TimeIn_DataFrame.Rout.save | 16 +++++++++++----- tests/posixst.Rout.save | 15 +++++++++++---- 8 files changed, 65 insertions(+), 41 deletions(-)
More information about QuantileGradeR at CRAN
Permanent link
Title: Adaptive Mixture of Student-t Distributions
Description: Provides functions to perform the fitting of an adaptive mixture
of Student-t distributions to a target density through its kernel function as described in
Ardia et al. (2009) <doi:10.18637/jss.v029.i03>. The
mixture approximation can then be used as the importance density in importance
sampling or as the candidate density in the Metropolis-Hastings algorithm to
obtain quantities of interest for the target density itself.
Author: David Ardia [aut, cre],
Lennart Hoogerheide [ctb],
Herman van Dijk [ctb]
Maintainer: David Ardia <david.ardia.ch@gmail.com>
Diff between AdMit versions 2.1.2 dated 2017-01-18 and 2.1.3 dated 2017-02-04
DESCRIPTION | 10 ++++++---- MD5 | 20 ++++++++++---------- NEWS | 3 +++ README.md | 30 ++++++++++++++++++++++++++++-- build/partial.rdb |binary inst/CITATION | 35 +++++++++++------------------------ inst/doc/AdMit.pdf |binary man/AdMit.Rd | 10 +++++----- man/AdMitIS.Rd | 8 ++++---- man/AdMitMH.Rd | 8 ++++---- man/Mit.Rd | 6 +++--- 11 files changed, 74 insertions(+), 56 deletions(-)
Title: 'Rcpp' Bindings for the 'CCTZ' Library
Description: 'Rcpp' Access to the 'CCTZ' timezone library is provided. 'CCTZ' is
a C++ library for translating between absolute and civil times using the rules
of a time zone. The 'CCTZ' source code, released under the Apache 2.0 License,
is included in this package. See <https://github.com/google/cctz> for more
details.
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppCCTZ versions 0.2.0 dated 2017-01-08 and 0.2.1 dated 2017-02-04
ChangeLog | 26 ++++++++++++++++++++++++++ DESCRIPTION | 19 ++++++++++--------- MD5 | 16 ++++++++-------- inst/NEWS.Rd | 11 +++++++++++ man/formatDatetime.Rd | 2 +- man/parseDatetime.Rd | 1 - man/toTz.Rd | 1 - man/tzDiff.Rd | 1 - src/utilities.cpp | 4 ++-- 9 files changed, 58 insertions(+), 23 deletions(-)
Title: Nanosecond-Resolution Time for R
Description: Full 64-bit resolution date and time support with resolution up
to nanosecond granularity is provided, with easy transition to and from the
standard 'POSIXct' type.
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between nanotime versions 0.1.0 dated 2017-01-10 and 0.1.1 dated 2017-02-04
ChangeLog | 33 +++++++++++++++++++++++++ DESCRIPTION | 10 +++---- MD5 | 16 ++++++------ NAMESPACE | 2 + R/nanotime.R | 71 ++++++++++++++++++++++++++++++++++++++---------------- README.md | 17 +++++++++--- build/partial.rdb |binary inst/NEWS.Rd | 20 ++++++++++++--- man/nanotime.Rd | 49 ++++++++++++++++++++++++++++--------- 9 files changed, 164 insertions(+), 54 deletions(-)
Title: Analysis of Multivariate Event Times
Description: Implementation of various statistical models for multivariate
event history data. Including multivariate cumulative incidence models, and
bivariate random effects probit models (Liability models). Also contains
two-stage binomial modelling that can do pairwise odds-ratio dependence
modelling based marginal logistic regression models. This is an alternative
to the alternating logistic regression approach (ALR).
Author: Klaus K. Holst and Thomas Scheike
Maintainer: Klaus K. Holst <klaus@holst.it>
Diff between mets versions 1.1.1 dated 2015-05-29 and 1.2 dated 2017-02-04
mets-1.1.1/mets/R/event.R |only mets-1.1.1/mets/R/twinlm2.R |only mets-1.1.1/mets/inst/binfam.rda |only mets-1.1.1/mets/inst/binomialtwostage.R |only mets-1.1.1/mets/inst/menalong.rda |only mets-1.1.1/mets/inst/mets1.png |only mets-1.1.1/mets/inst/phenotype1.rda |only mets-1.1.1/mets/inst/twinbmi2.rda |only mets-1.1.1/mets/man/Event.Rd |only mets-1.1.1/mets/man/easy.twostage.Rd |only mets-1.1.1/mets/man/twostage.Rd |only mets-1.1.1/mets/src/binomial-plackett.cpp |only mets-1.1.1/mets/src/plackettMLE.cpp |only mets-1.2/mets/DESCRIPTION | 15 mets-1.2/mets/MD5 | 273 +- mets-1.2/mets/NAMESPACE | 164 + mets-1.2/mets/NEWS | 43 mets-1.2/mets/R/RcppExports.R | 14 mets-1.2/mets/R/aalenfrailty.R | 1 mets-1.2/mets/R/bicomprisk.R | 28 mets-1.2/mets/R/binomial.twostage.R | 1193 +++++++---- mets-1.2/mets/R/biprobit.R | 49 mets-1.2/mets/R/biprobit.time.R | 4 mets-1.2/mets/R/blocksample.R | 53 mets-1.2/mets/R/bptwin.R | 2 mets-1.2/mets/R/casewise.R | 3 mets-1.2/mets/R/claytonakes.R | 10 mets-1.2/mets/R/clusterindex-reshape.R | 104 - mets-1.2/mets/R/cor.R | 120 - mets-1.2/mets/R/daggregate.R |only mets-1.2/mets/R/dby.R |only mets-1.2/mets/R/divide.conquer.R | 29 mets-1.2/mets/R/dprint.R |only mets-1.2/mets/R/dsort.R |only mets-1.2/mets/R/dtable.R |only mets-1.2/mets/R/dutils.R |only mets-1.2/mets/R/exmarg.R | 45 mets-1.2/mets/R/fastapprox.R | 21 mets-1.2/mets/R/fastcluster.R |only mets-1.2/mets/R/fastreshape.R | 34 mets-1.2/mets/R/force.same.cens.R |only mets-1.2/mets/R/ipw.R | 83 mets-1.2/mets/R/lifecourse.R |only mets-1.2/mets/R/lifetable.R | 43 mets-1.2/mets/R/mets-package.R | 23 mets-1.2/mets/R/normal0.R | 4 mets-1.2/mets/R/onload.R | 4 mets-1.2/mets/R/options.R |only mets-1.2/mets/R/phreg.R | 33 mets-1.2/mets/R/phreg.par.R | 3 mets-1.2/mets/R/procformula.R | 177 + mets-1.2/mets/R/sim-nordic-twin.R | 2 mets-1.2/mets/R/sim.clayton.oakes.R | 395 +++ mets-1.2/mets/R/summary.biprobit.R | 36 mets-1.2/mets/R/tetrachor.R | 2 mets-1.2/mets/R/twin.clustertrunc.r | 1 mets-1.2/mets/R/twinlm.R | 29 mets-1.2/mets/R/twinlm.time.R | 3 mets-1.2/mets/R/twostage.R | 1727 +++++++++++++++-- mets-1.2/mets/inst/include |only mets-1.2/mets/inst/misc/binfam.rda |only mets-1.2/mets/inst/misc/binomialtwostage.R |only mets-1.2/mets/inst/misc/bptwin-vs-bintwostage.r |only mets-1.2/mets/inst/misc/casewisea.png |binary mets-1.2/mets/inst/misc/cifMZ.png |binary mets-1.2/mets/inst/misc/conc2.png |binary mets-1.2/mets/inst/misc/concordance.png |binary mets-1.2/mets/inst/misc/cumh.png |binary mets-1.2/mets/inst/misc/ipw.png |binary mets-1.2/mets/inst/misc/menalong.rda |only mets-1.2/mets/inst/misc/mets1.png |only mets-1.2/mets/inst/misc/pairwise-binomial-twostage.r |only mets-1.2/mets/inst/misc/pairwise-competing-risks-ace.r |only mets-1.2/mets/inst/misc/pairwise-twostage.r |only mets-1.2/mets/inst/misc/pcif.png |binary mets-1.2/mets/inst/misc/pcifl.png |binary mets-1.2/mets/inst/misc/phenotype1.rda |only mets-1.2/mets/inst/misc/twinbmi2.rda |only mets-1.2/mets/inst/misc/workshop-src.org | 769 +++++++ mets-1.2/mets/man/ClaytonOakes.Rd | 12 mets-1.2/mets/man/Dbvn.Rd | 4 mets-1.2/mets/man/EVaddGam.Rd |only mets-1.2/mets/man/Grandom.cif.Rd | 55 mets-1.2/mets/man/aalenfrailty.Rd | 3 mets-1.2/mets/man/back2timereg.Rd | 2 mets-1.2/mets/man/bicomprisk.Rd | 42 mets-1.2/mets/man/binomial.twostage.Rd | 179 + mets-1.2/mets/man/biprobit.Rd | 13 mets-1.2/mets/man/blocksample.Rd | 9 mets-1.2/mets/man/bptwin.Rd | 2 mets-1.2/mets/man/casewise.Rd | 8 mets-1.2/mets/man/casewise.test.Rd | 5 mets-1.2/mets/man/cluster.index.Rd |only mets-1.2/mets/man/concordance.Rd | 2 mets-1.2/mets/man/cor.cif.Rd | 55 mets-1.2/mets/man/daggregate.Rd |only mets-1.2/mets/man/dby.Rd |only mets-1.2/mets/man/dcor.Rd |only mets-1.2/mets/man/dcut.Rd |only mets-1.2/mets/man/dermalridges.Rd | 2 mets-1.2/mets/man/dermalridgesMZ.Rd | 2 mets-1.2/mets/man/divide.conquer.Rd | 8 mets-1.2/mets/man/divide.conquer.timereg.Rd | 2 mets-1.2/mets/man/dlag.Rd |only mets-1.2/mets/man/dprint.Rd |only mets-1.2/mets/man/drelevel.Rd |only mets-1.2/mets/man/dsort.Rd |only mets-1.2/mets/man/dtable.Rd |only mets-1.2/mets/man/easy.binomial.twostage.Rd | 89 mets-1.2/mets/man/easy.survival.twostage.Rd |only mets-1.2/mets/man/eventpois.Rd | 3 mets-1.2/mets/man/familycluster.index.Rd |only mets-1.2/mets/man/familyclusterWithProbands.index.Rd |only mets-1.2/mets/man/fast.approx.Rd | 7 mets-1.2/mets/man/fast.pattern.Rd | 2 mets-1.2/mets/man/fast.reshape.Rd | 25 mets-1.2/mets/man/internal.Rd | 30 mets-1.2/mets/man/ipw.Rd | 4 mets-1.2/mets/man/ipw2.Rd | 5 mets-1.2/mets/man/lifecourse.Rd |only mets-1.2/mets/man/lifetable.matrix.Rd | 2 mets-1.2/mets/man/mena.Rd | 2 mets-1.2/mets/man/mets-package.Rd | 4 mets-1.2/mets/man/mets.options.Rd |only mets-1.2/mets/man/migr.Rd | 2 mets-1.2/mets/man/multcif.Rd | 2 mets-1.2/mets/man/np.Rd | 2 mets-1.2/mets/man/phreg.Rd | 4 mets-1.2/mets/man/plack.cif.Rd | 2 mets-1.2/mets/man/printcasewisetest.Rd | 2 mets-1.2/mets/man/prt.Rd | 2 mets-1.2/mets/man/random.cif.Rd | 15 mets-1.2/mets/man/simAalenFrailty.Rd | 2 mets-1.2/mets/man/simClaytonOakes.Rd | 2 mets-1.2/mets/man/simClaytonOakesWei.Rd | 2 mets-1.2/mets/man/summary.cor.Rd | 13 mets-1.2/mets/man/survival.twostage.Rd |only mets-1.2/mets/man/test.conc.Rd | 2 mets-1.2/mets/man/tetrachoric.Rd | 4 mets-1.2/mets/man/twin.clustertrunc.Rd | 7 mets-1.2/mets/man/twinbmi.Rd | 2 mets-1.2/mets/man/twinlm.Rd | 4 mets-1.2/mets/man/twinsim.Rd | 2 mets-1.2/mets/man/twinstut.Rd | 2 mets-1.2/mets/src/Makevars | 1 mets-1.2/mets/src/RcppExports.cpp | 117 - mets-1.2/mets/src/aalenfrailty.cpp | 362 +++ mets-1.2/mets/src/apply.cpp |only mets-1.2/mets/src/binomial-twostage.cpp |only mets-1.2/mets/src/claytonoakes.cpp | 9 mets-1.2/mets/src/clusterindex.cpp | 51 mets-1.2/mets/src/cor.cpp | 147 + mets-1.2/mets/src/fastcox.cpp | 99 mets-1.2/mets/src/fastcox.h | 5 mets-1.2/mets/src/mvn.cpp | 64 mets-1.2/mets/src/mvn.h | 14 mets-1.2/mets/src/mvt.f | 1 mets-1.2/mets/src/survival-twostage.cpp |only mets-1.2/mets/src/tools.cpp | 44 mets-1.2/mets/src/tools.h | 1 mets-1.2/mets/src/twostage.h |only mets-1.2/mets/tests/test-all.R | 7 mets-1.2/mets/tests/testthat/test_approx.R | 2 mets-1.2/mets/tests/testthat/test_dutils.R |only mets-1.2/mets/tests/testthat/test_reshape.R | 22 165 files changed, 5738 insertions(+), 1398 deletions(-)
Title: Hydrological Data Discovery Tools
Description: Facilitates discovery and handling of hydrological data, access to catalogues and databases.
Author: Claudia Vitolo [aut, cre],
Wouter Buytaert [ctb] (This package was developed during Claudia's PhD
at Imperial College London and Wouter was the PhD supervisor.),
Erin Le Dell [ctb] (Erin reviewed the package for rOpenSci, see
https://github.com/ropensci/onboarding/issues/73),
Michael Sumner [ctb] (Michael reviewed the package for rOpenSci, see
https://github.com/ropensci/onboarding/issues/73)
Maintainer: Claudia Vitolo <cvitolodev@gmail.com>
Diff between hddtools versions 0.3.0 dated 2016-09-06 and 0.5 dated 2017-02-04
hddtools-0.3.0/hddtools/inst/extdata/GRDC |only hddtools-0.3.0/hddtools/inst/paper/paper.html |only hddtools-0.3.0/hddtools/inst/paper/ropensci.txt |only hddtools-0.3.0/hddtools/tests/testthat/test-GRDC.R |only hddtools-0.3.0/hddtools/tests/testthat/test-MOPEX.R |only hddtools-0.3.0/hddtools/tests/testthat/test-SEPA.R |only hddtools-0.5/hddtools/DESCRIPTION | 34 - hddtools-0.5/hddtools/MD5 | 103 ++- hddtools-0.5/hddtools/NAMESPACE | 5 hddtools-0.5/hddtools/R/Data60UK.R | 175 +++--- hddtools-0.5/hddtools/R/GRDC.R | 214 ++++--- hddtools-0.5/hddtools/R/HadDAILY.R | 6 hddtools-0.5/hddtools/R/KGClimateClass.R | 290 +++++----- hddtools-0.5/hddtools/R/MOPEX.R | 153 ++++- hddtools-0.5/hddtools/R/SEPA.R | 143 +++- hddtools-0.5/hddtools/R/TRMM.R | 175 +++--- hddtools-0.5/hddtools/R/bboxSpatialPolygon.R | 33 - hddtools-0.5/hddtools/R/getContent.R | 14 hddtools-0.5/hddtools/R/hddtools-package.R | 156 +++++ hddtools-0.5/hddtools/README.md | 283 +-------- hddtools-0.5/hddtools/build |only hddtools-0.5/hddtools/data/Data60UKcatalogue.rda |only hddtools-0.5/hddtools/data/GRDCcatalogue.rda |only hddtools-0.5/hddtools/data/MOPEXcatalogue.rda |only hddtools-0.5/hddtools/data/SEPAcatalogue.rda |binary hddtools-0.5/hddtools/data/grdcLTMMD.rda |only hddtools-0.5/hddtools/inst/doc |only hddtools-0.5/hddtools/inst/paper/hydrology-and-earth-system-sciences.csl |only hddtools-0.5/hddtools/inst/paper/paper.bib | 78 ++ hddtools-0.5/hddtools/inst/paper/paper.md | 23 hddtools-0.5/hddtools/inst/paper/paper.pdf |only hddtools-0.5/hddtools/man/Data60UKcatalogue.Rd |only hddtools-0.5/hddtools/man/GRDCcatalogue.Rd |only hddtools-0.5/hddtools/man/HadDAILY.Rd | 2 hddtools-0.5/hddtools/man/KGClimateClass.Rd | 12 hddtools-0.5/hddtools/man/MOPEXcatalogue.Rd |only hddtools-0.5/hddtools/man/SEPAcatalogue.Rd | 4 hddtools-0.5/hddtools/man/TRMM.Rd | 38 - hddtools-0.5/hddtools/man/bboxSpatialPolygon.Rd | 13 hddtools-0.5/hddtools/man/catalogueData60UK.Rd | 26 hddtools-0.5/hddtools/man/catalogueGRDC.Rd | 35 - hddtools-0.5/hddtools/man/catalogueMOPEX.Rd | 30 - hddtools-0.5/hddtools/man/catalogueSEPA.Rd | 25 hddtools-0.5/hddtools/man/getContent.Rd | 2 hddtools-0.5/hddtools/man/grdcLTMMD.Rd |only hddtools-0.5/hddtools/man/hddtools.Rd | 17 hddtools-0.5/hddtools/man/tsData60UK.Rd | 14 hddtools-0.5/hddtools/man/tsGRDC.Rd | 10 hddtools-0.5/hddtools/man/tsMOPEX.Rd | 8 hddtools-0.5/hddtools/man/tsSEPA.Rd | 7 hddtools-0.5/hddtools/tests/testthat/test-HadDAILY.R | 3 hddtools-0.5/hddtools/tests/testthat/test-KGClimateClass.R | 8 hddtools-0.5/hddtools/tests/testthat/test-TRMM.R | 30 - hddtools-0.5/hddtools/tests/testthat/test-bboxSpatialPolygon.R | 22 hddtools-0.5/hddtools/tests/testthat/test-catalogueData60UK.R | 36 - hddtools-0.5/hddtools/tests/testthat/test-catalogueGRDC.R |only hddtools-0.5/hddtools/tests/testthat/test-catalogueMOPEX.R |only hddtools-0.5/hddtools/tests/testthat/test-catalogueSEPA.R |only hddtools-0.5/hddtools/tests/testthat/test-tsData60UK.R |only hddtools-0.5/hddtools/tests/testthat/test-tsGRDC.R |only hddtools-0.5/hddtools/tests/testthat/test-tsMOPEX.R |only hddtools-0.5/hddtools/tests/testthat/test-tsSEPA.R |only hddtools-0.5/hddtools/vignettes/hddtools_vignette.Rmd | 189 ++++-- 63 files changed, 1421 insertions(+), 995 deletions(-)
Title: Dithionite Scramblase Assay Analysis
Description: The lipid scrambling activity of protein extracts and purified
scramblases is often determined using a fluorescence-based assay involving
many manual steps. flippant offers an integrated solution for the analysis
and publication-grade graphical presentation of dithionite scramblase
assays, as well as a platform for review, dissemination and extension of the
strategies it employs. The package's name derives from a play on the fact
that lipid scrambling is also sometimes referred to as 'flipping'.
Author: Johannes Graumann [cre, aut],
Richard Cotton [ctb]
Maintainer: Johannes Graumann <jog2030@qatar-med.cornell.edu>
Diff between flippant versions 1.0.2 dated 2016-12-21 and 1.1.0 dated 2017-02-04
flippant-1.0.2/flippant/README.md |only flippant-1.1.0/flippant/DESCRIPTION | 17 ++++++++-------- flippant-1.1.0/flippant/MD5 | 17 +++++++--------- flippant-1.1.0/flippant/man/extract_case_study_data.Rd | 7 ++---- flippant-1.1.0/flippant/man/flippant.Rd | 1 flippant-1.1.0/flippant/man/parse_felix_32_output.Rd | 7 ++---- flippant-1.1.0/flippant/man/parse_felix_gx_output.Rd | 7 ++---- flippant-1.1.0/flippant/man/parse_fluorimeter_output.Rd | 7 ++---- flippant-1.1.0/flippant/man/parse_manual_output.Rd | 7 ++---- flippant-1.1.0/flippant/man/scramblase_assay_plot.Rd | 16 +++++++++------ 10 files changed, 42 insertions(+), 44 deletions(-)
Title: Additional Univariate and Multivariate Distributions
Description: Density, distribution function, quantile function
and random generation for a number of univariate
and multivariate distributions. This package implements the
following distributions: Bernoulli, beta-binomial, beta-negative
binomial, beta prime, Bhattacharjee, Birnbaum-Saunders,
bivariate normal, bivariate Poisson, categorical, Dirichlet,
Dirichlet-multinomial, discrete gamma, discrete Laplace,
discrete normal, discrete uniform, discrete Weibull, Frechet,
gamma-Poisson, generalized extreme value, Gompertz,
generalized Pareto, Gumbel, half-Cauchy, half-normal, half-t,
Huber density, inverse chi-squared, inverse-gamma, Kumaraswamy,
Laplace, logarithmic, Lomax, multivariate hypergeometric,
multinomial, negative hypergeometric, non-standard t,
non-standard beta, normal mixture, Poisson mixture, Pareto,
power, reparametrized beta, Rayleigh, shifted Gompertz, Skellam,
slash, triangular, truncated binomial, truncated normal,
truncated Poisson, Tukey lambda, Wald, zero-inflated binomial,
zero-inflated negative binomial, zero-inflated Poisson.
Author: Tymoteusz Wolodzko
Maintainer: Tymoteusz Wolodzko <twolodzko+extraDistr@gmail.com>
Diff between extraDistr versions 1.8.2 dated 2016-10-10 and 1.8.3 dated 2017-02-04
extraDistr-1.8.2/extraDistr/src/const.h |only extraDistr-1.8.3/extraDistr/DESCRIPTION | 30 extraDistr-1.8.3/extraDistr/MD5 | 291 +- extraDistr-1.8.3/extraDistr/NAMESPACE | 16 extraDistr-1.8.3/extraDistr/NEWS.md | 101 extraDistr-1.8.3/extraDistr/R/RcppExports.R | 96 extraDistr-1.8.3/extraDistr/R/beta-binomial-distribution.R | 33 extraDistr-1.8.3/extraDistr/R/beta-negative-binomial-distribution.R | 30 extraDistr-1.8.3/extraDistr/R/beta-prime-distribution.R | 2 extraDistr-1.8.3/extraDistr/R/categorical-distribution.R | 20 extraDistr-1.8.3/extraDistr/R/discrete-gamma-distribution.R |only extraDistr-1.8.3/extraDistr/R/discrete-laplace-distribution.R | 20 extraDistr-1.8.3/extraDistr/R/discrete-normal-distribution.R | 34 extraDistr-1.8.3/extraDistr/R/discrete-uniform-distribution.R | 1 extraDistr-1.8.3/extraDistr/R/discrete-weibull-distribution.R | 2 extraDistr-1.8.3/extraDistr/R/gamma-poisson-distribution.R | 27 extraDistr-1.8.3/extraDistr/R/gompertz-distribution.R | 2 extraDistr-1.8.3/extraDistr/R/laplace-distribution.R | 4 extraDistr-1.8.3/extraDistr/R/logarithmic-series-distribution.R | 1 extraDistr-1.8.3/extraDistr/R/mixture-of-poisson-distributions.R | 2 extraDistr-1.8.3/extraDistr/R/multivariate-hypergeometric-distribution.R | 4 extraDistr-1.8.3/extraDistr/R/negative-hypergeometric-distribution.R |only extraDistr-1.8.3/extraDistr/R/rademacher-distribution.R |only extraDistr-1.8.3/extraDistr/R/shifted-gompertz-distribution.R |only extraDistr-1.8.3/extraDistr/R/truncated-binomial-distribution.R |only extraDistr-1.8.3/extraDistr/R/truncated-poisson-distributtion.R | 31 extraDistr-1.8.3/extraDistr/R/wald-distribution.R | 10 extraDistr-1.8.3/extraDistr/R/zero-inflated-binomial-distribution.R | 2 extraDistr-1.8.3/extraDistr/R/zero-inflated-negative-binomial-distribution.R | 2 extraDistr-1.8.3/extraDistr/R/zero-inflated-poisson-distribution.R | 2 extraDistr-1.8.3/extraDistr/README.md | 11 extraDistr-1.8.3/extraDistr/man/Bernoulli.Rd | 1 extraDistr-1.8.3/extraDistr/man/BetaBinom.Rd | 33 extraDistr-1.8.3/extraDistr/man/BetaNegBinom.Rd | 30 extraDistr-1.8.3/extraDistr/man/BetaPrime.Rd | 3 extraDistr-1.8.3/extraDistr/man/Bhattacharjee.Rd | 1 extraDistr-1.8.3/extraDistr/man/BirnbaumSaunders.Rd | 1 extraDistr-1.8.3/extraDistr/man/BivNormal.Rd | 1 extraDistr-1.8.3/extraDistr/man/BivPoiss.Rd | 1 extraDistr-1.8.3/extraDistr/man/Categorical.Rd | 15 extraDistr-1.8.3/extraDistr/man/DirMnom.Rd | 1 extraDistr-1.8.3/extraDistr/man/Dirichlet.Rd | 1 extraDistr-1.8.3/extraDistr/man/DiscreteGamma.Rd |only extraDistr-1.8.3/extraDistr/man/DiscreteLaplace.Rd | 19 extraDistr-1.8.3/extraDistr/man/DiscreteNormal.Rd | 27 extraDistr-1.8.3/extraDistr/man/DiscreteUniform.Rd | 2 extraDistr-1.8.3/extraDistr/man/DiscreteWeibull.Rd | 3 extraDistr-1.8.3/extraDistr/man/Frechet.Rd | 1 extraDistr-1.8.3/extraDistr/man/GEV.Rd | 1 extraDistr-1.8.3/extraDistr/man/GPD.Rd | 1 extraDistr-1.8.3/extraDistr/man/GammaPoiss.Rd | 27 extraDistr-1.8.3/extraDistr/man/Gompertz.Rd | 3 extraDistr-1.8.3/extraDistr/man/Gumbel.Rd | 1 extraDistr-1.8.3/extraDistr/man/HalfCauchy.Rd | 1 extraDistr-1.8.3/extraDistr/man/HalfNormal.Rd | 1 extraDistr-1.8.3/extraDistr/man/HalfT.Rd | 1 extraDistr-1.8.3/extraDistr/man/Huber.Rd | 1 extraDistr-1.8.3/extraDistr/man/InvChiSq.Rd | 1 extraDistr-1.8.3/extraDistr/man/InvGamma.Rd | 1 extraDistr-1.8.3/extraDistr/man/Kumaraswamy.Rd | 1 extraDistr-1.8.3/extraDistr/man/Laplace.Rd | 5 extraDistr-1.8.3/extraDistr/man/LogSeries.Rd | 2 extraDistr-1.8.3/extraDistr/man/Lomax.Rd | 1 extraDistr-1.8.3/extraDistr/man/MultiHypergeometric.Rd | 1 extraDistr-1.8.3/extraDistr/man/Multinomial.Rd | 1 extraDistr-1.8.3/extraDistr/man/NSBeta.Rd | 1 extraDistr-1.8.3/extraDistr/man/NegHyper.Rd |only extraDistr-1.8.3/extraDistr/man/NonStandardT.Rd | 1 extraDistr-1.8.3/extraDistr/man/NormalMix.Rd | 1 extraDistr-1.8.3/extraDistr/man/Pareto.Rd | 1 extraDistr-1.8.3/extraDistr/man/PoissonMix.Rd | 3 extraDistr-1.8.3/extraDistr/man/PowerDist.Rd | 1 extraDistr-1.8.3/extraDistr/man/PropBeta.Rd | 1 extraDistr-1.8.3/extraDistr/man/Rademacher.Rd |only extraDistr-1.8.3/extraDistr/man/Rayleigh.Rd | 1 extraDistr-1.8.3/extraDistr/man/ShiftGomp.Rd |only extraDistr-1.8.3/extraDistr/man/Skellam.Rd | 1 extraDistr-1.8.3/extraDistr/man/Slash.Rd | 1 extraDistr-1.8.3/extraDistr/man/Triangular.Rd | 1 extraDistr-1.8.3/extraDistr/man/TruncBinom.Rd |only extraDistr-1.8.3/extraDistr/man/TruncNormal.Rd | 1 extraDistr-1.8.3/extraDistr/man/TruncPoisson.Rd | 24 extraDistr-1.8.3/extraDistr/man/TuckeyLambda.Rd | 1 extraDistr-1.8.3/extraDistr/man/Wald.Rd | 10 extraDistr-1.8.3/extraDistr/man/ZIB.Rd | 3 extraDistr-1.8.3/extraDistr/man/ZINB.Rd | 3 extraDistr-1.8.3/extraDistr/man/ZIP.Rd | 3 extraDistr-1.8.3/extraDistr/man/extraDistr.Rd | 1 extraDistr-1.8.3/extraDistr/src/RcppExports.cpp | 1063 +++++----- extraDistr-1.8.3/extraDistr/src/bernoulli-distribution.cpp | 129 - extraDistr-1.8.3/extraDistr/src/beta-binomial-distribution.cpp | 235 +- extraDistr-1.8.3/extraDistr/src/beta-negative-binomial-distribution.cpp | 244 +- extraDistr-1.8.3/extraDistr/src/beta-prime-distribution.cpp | 178 - extraDistr-1.8.3/extraDistr/src/bhattacharjee-distribution.cpp | 104 extraDistr-1.8.3/extraDistr/src/birnbaum-saunders-distribution.cpp | 137 - extraDistr-1.8.3/extraDistr/src/bivariate-normal-distribution.cpp | 103 extraDistr-1.8.3/extraDistr/src/bivariate-poisson-distribution.cpp | 90 extraDistr-1.8.3/extraDistr/src/categorical-distribution.cpp | 382 +-- extraDistr-1.8.3/extraDistr/src/dirichlet-distribution.cpp | 121 - extraDistr-1.8.3/extraDistr/src/dirichlet-multinomial-distribution.cpp | 175 - extraDistr-1.8.3/extraDistr/src/discrete-gamma-distribution.cpp |only extraDistr-1.8.3/extraDistr/src/discrete-laplace-distribution.cpp | 106 extraDistr-1.8.3/extraDistr/src/discrete-normal-distribution.cpp | 36 extraDistr-1.8.3/extraDistr/src/discrete-uniform-distribution.cpp | 139 - extraDistr-1.8.3/extraDistr/src/discrete-weibull-distribution.cpp | 138 - extraDistr-1.8.3/extraDistr/src/frechet-distribution.cpp | 148 - extraDistr-1.8.3/extraDistr/src/gamma-poisson-distribution.cpp | 213 +- extraDistr-1.8.3/extraDistr/src/gev-distribution.cpp | 138 - extraDistr-1.8.3/extraDistr/src/gompertz-distribution.cpp | 151 - extraDistr-1.8.3/extraDistr/src/gpd-distribution.cpp | 148 - extraDistr-1.8.3/extraDistr/src/gumbel-distribution.cpp | 139 - extraDistr-1.8.3/extraDistr/src/half-cauchy-distribution.cpp | 121 - extraDistr-1.8.3/extraDistr/src/half-normal-distribution.cpp | 125 - extraDistr-1.8.3/extraDistr/src/half-t-distribution.cpp | 124 - extraDistr-1.8.3/extraDistr/src/huber-distribution.cpp | 158 - extraDistr-1.8.3/extraDistr/src/inverse-gamma-distribution.cpp | 43 extraDistr-1.8.3/extraDistr/src/kumaraswamy-distribution.cpp | 160 - extraDistr-1.8.3/extraDistr/src/laplace-distribution.cpp | 130 - extraDistr-1.8.3/extraDistr/src/logarithmic-series-distribution.cpp | 148 - extraDistr-1.8.3/extraDistr/src/lomax-distribution.cpp | 147 - extraDistr-1.8.3/extraDistr/src/mixture-of-normal-distributions.cpp | 161 - extraDistr-1.8.3/extraDistr/src/mixture-of-poisson-distributions.cpp | 164 - extraDistr-1.8.3/extraDistr/src/multinomial-distribution.cpp | 163 - extraDistr-1.8.3/extraDistr/src/multivariate-hypergeometric-distribution.cpp | 185 - extraDistr-1.8.3/extraDistr/src/negative-hypergeometric-distribution.cpp |only extraDistr-1.8.3/extraDistr/src/non-standard-t-distribution.cpp | 141 - extraDistr-1.8.3/extraDistr/src/non-standart-beta-distribution.cpp | 135 - extraDistr-1.8.3/extraDistr/src/pareto-distribution.cpp | 149 - extraDistr-1.8.3/extraDistr/src/power-distribution.cpp | 181 - extraDistr-1.8.3/extraDistr/src/proportion-distribution.cpp | 139 - extraDistr-1.8.3/extraDistr/src/rademacher-distribution.cpp |only extraDistr-1.8.3/extraDistr/src/rayleigh-distribution.cpp | 137 - extraDistr-1.8.3/extraDistr/src/shared.cpp | 135 - extraDistr-1.8.3/extraDistr/src/shared.h | 48 extraDistr-1.8.3/extraDistr/src/shared_inline.h |only extraDistr-1.8.3/extraDistr/src/shifted-gompertz-distribution.cpp |only extraDistr-1.8.3/extraDistr/src/skellam-distribution.cpp | 62 extraDistr-1.8.3/extraDistr/src/slash-distribution.cpp | 96 extraDistr-1.8.3/extraDistr/src/triangular-distribution.cpp | 150 - extraDistr-1.8.3/extraDistr/src/truncated-binomial-distribution.cpp |only extraDistr-1.8.3/extraDistr/src/truncated-normal-distribution.cpp | 191 + extraDistr-1.8.3/extraDistr/src/truncated-poisson-distribution.cpp | 249 +- extraDistr-1.8.3/extraDistr/src/tuckey-lambda-distribution.cpp | 72 extraDistr-1.8.3/extraDistr/src/wald-distribution.cpp | 93 extraDistr-1.8.3/extraDistr/src/zero-inflated-binomial-distribution.cpp | 147 - extraDistr-1.8.3/extraDistr/src/zero-inflated-negative-binomial-distribution.cpp | 147 - extraDistr-1.8.3/extraDistr/src/zero-inflated-poisson-distribution.cpp | 135 - extraDistr-1.8.3/extraDistr/tests/testthat/test-NAs.R | 350 +-- extraDistr-1.8.3/extraDistr/tests/testthat/test-discrete-sum-to-unity.R |only extraDistr-1.8.3/extraDistr/tests/testthat/test-discrete.R | 43 extraDistr-1.8.3/extraDistr/tests/testthat/test-inappropriate-parameters.R | 339 +-- extraDistr-1.8.3/extraDistr/tests/testthat/test-infinity.R | 28 extraDistr-1.8.3/extraDistr/tests/testthat/test-multivariate-distributions.R | 22 extraDistr-1.8.3/extraDistr/tests/testthat/test-non-negative.R | 9 extraDistr-1.8.3/extraDistr/tests/testthat/test-probabilities.R |only extraDistr-1.8.3/extraDistr/tests/testthat/test-quantile-functions.R | 19 156 files changed, 5855 insertions(+), 4531 deletions(-)
Title: Analyze Two Choice Reaction Time Data with the D*M Method
Description: A collection of functions to estimate parameters of a diffusion model via a D*M analysis. Build in models are: the Ratcliff diffusion model, the RWiener diffusion model, and Linear Ballistic Accumulator models. Custom models functions can be specified as long as they have a density function.
Author: Don van den Bergh, Stijn Verdonck, Francis Tuerlinckx
Maintainer: Don van den Bergh <donvdbergh@hotmail.com>
Diff between DstarM versions 0.1.0 dated 2016-08-29 and 0.2.1 dated 2017-02-04
DESCRIPTION | 8 ++-- MD5 | 35 ++++++++++------- NAMESPACE | 3 + R/Densities.R | 7 +++ R/DstarMsummary.R | 22 +++++------ R/calcIC.R | 25 ++++++------ R/chisqFit.R |only R/estCdf.R | 4 +- R/estDstarM.R | 104 +++++++++++++++++++++++++++++++++------------------- R/estND.R | 4 ++ R/estObserved.R | 98 +++++++++++++++++++++++++++++++++++++++---------- R/estQdf.R | 4 +- R/getPdfs.R |only R/obsQuantiles.R |only README.md |only man/Voss.density.Rd | 7 +++ man/calcIC.Rd | 23 ++++++----- man/chisqFit.Rd |only man/estDstarM.Rd | 2 - man/estObserved.Rd | 13 ++++++ man/getPdfs.Rd |only man/obsQuantiles.Rd |only 22 files changed, 243 insertions(+), 116 deletions(-)
Title: Bayesian Estimation of the GARCH(1,1) Model with Student-t
Innovations
Description: Provides the bayesGARCH() function which performs the
Bayesian estimation of the GARCH(1,1) model with Student's t innovations as described in Ardia (2008) <doi:10.1007/978-3-540-78657-3>.
Author: David Ardia [aut, cre]
Maintainer: David Ardia <david.ardia.ch@gmail.com>
Diff between bayesGARCH versions 2.1.2 dated 2017-01-12 and 2.1.3 dated 2017-02-04
DESCRIPTION | 12 +++++++----- MD5 | 12 ++++++------ README | 6 ++++-- README.md | 24 +++++++++++++++++++++++- build/partial.rdb |binary inst/CITATION | 54 +++++++++++++++++------------------------------------- man/bayesGARCH.Rd | 26 ++++++++++++++++---------- 7 files changed, 73 insertions(+), 61 deletions(-)
Title: Statistical Tolerance Intervals and Regions
Description: Statistical tolerance limits provide the limits between which we can expect to find a specified proportion of a sampled population with a given level of confidence. This package provides functions for estimating tolerance limits (intervals) for various univariate distributions (binomial, Cauchy, discrete Pareto, exponential, two-parameter exponential, extreme value, hypergeometric, Laplace, logistic, negative binomial, negative hypergeometric, normal, Pareto, Poisson-Lindley, Poisson, uniform, and Zipf-Mandelbrot), Bayesian normal tolerance limits, multivariate normal tolerance regions, nonparametric tolerance intervals, tolerance bands for regression settings (linear regression, nonlinear regression, nonparametric regression, and multivariate regression), and analysis of variance tolerance intervals. Visualizations are also available for most of these settings.
Author: Derek S. Young [aut, cre]
Maintainer: Derek S. Young <derek.young@uky.edu>
Diff between tolerance versions 1.2.0 dated 2016-02-17 and 1.3.0 dated 2017-02-04
DESCRIPTION | 14 +- MD5 | 26 ++- NAMESPACE | 2 NEWS | 13 + R/Kfactorsim.R |only R/neghyper.R | 112 ++++++++-------- R/nonpartolint.R | 326 +++++++++++++++++++++++------------------------ R/simnormtolint.R |only man/Kfactorsim.Rd |only man/bayesnormtolint.Rd | 6 man/hypertolint.Rd | 6 man/neghypertolint.Rd | 63 ++++----- man/nonpartolint.Rd | 140 ++++++++++---------- man/normOC.Rd | 2 man/simnormtolint.Rd |only man/tolerance.package.Rd | 9 - 16 files changed, 366 insertions(+), 353 deletions(-)
Title: Recursive Partitioning for Modeling Survey Data
Description: Fits a linear model to survey data in each node obtained by
recursively partitioning the data. The splitting variables and splits
selected are obtained using a procedure which adjusts for complex sample
design features used to obtain the data. Likewise the model fitting
algorithm produces design-consistent coefficients to the least squares
linear model between the dependent and independent variables.
The first stage of the design is accounted for in the provided variance
estimates. The main function returns the resulting binary tree with the
linear model fit at every end-node. The package provides a number of
functions and methods for these trees.
Author: daniell toth [aut, cre]
Maintainer: daniell toth <danielltoth@yahoo.com>
Diff between rpms versions 0.1.0 dated 2016-10-21 and 0.2.0 dated 2017-02-04
DESCRIPTION | 14 ++-- MD5 | 54 +++++++++------ NAMESPACE | 1 R/RcppExports.R | 2 R/main_0_1_0.R | 48 +++++++++----- R/qtree.R | 63 ++++++++++-------- R/rpms.R | 4 - R/sfun_rpm_0_1.R | 152 +++++++++++++++++++-------------------------- build |only inst |only man/CE.Rd | 2 man/Wtest.Rd | 3 man/domain_est.Rd | 1 man/end_nodes.Rd |only man/in_node.Rd | 7 +- man/node_plot.Rd | 12 +-- man/predict.rpms.Rd | 3 man/print.rpms.Rd | 3 man/qtree.Rd | 9 +- man/rpms-package.Rd |only man/rpms.Rd | 25 ------- man/split.Rd | 1 man/survLm.Rd | 1 man/survLm_model.Rd | 1 man/ttest.Rd | 1 man/var_select.Rd | 1 src/RcppExports.cpp | 62 +++++++++--------- src/variable_test_rpms.cpp | 27 +++++-- vignettes |only 29 files changed, 246 insertions(+), 251 deletions(-)
Title: Image Registration Using the 'NiftyReg' Library
Description: Provides an 'R' interface to the 'NiftyReg' image registration tools
<http://sourceforge.net/projects/niftyreg/>. Linear and nonlinear registration
are supported, in two and three dimensions.
Author: Jon Clayden [cre, aut],
Marc Modat [aut],
Benoit Presles [aut],
Thanasis Anthopoulos [aut],
Pankaj Daga [aut]
Maintainer: Jon Clayden <code@clayden.org>
Diff between RNiftyReg versions 2.4.1 dated 2016-12-08 and 2.5.0 dated 2017-02-04
RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/Content.cpp |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/Content.h |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/_reg_polyAffine.cpp |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/_reg_polyAffine.h |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/CPUKernels.cpp |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/CPUKernels.h |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/_reg_KLdivergence.cpp |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/_reg_KLdivergence.h |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/_reg_dti.cpp |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/_reg_dti.h |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/_reg_femTrans.cpp |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/_reg_femTrans.h |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/_reg_lncc.cpp |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/_reg_lncc.h |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/_reg_polyAffine.cpp |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/_reg_polyAffine.h |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/_reg_ssd.cpp |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/_reg_ssd.h |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/_reg_thinPlateSpline.cpp |only RNiftyReg-2.4.1/RNiftyReg/src/reg-lib/cpu/_reg_thinPlateSpline.h |only RNiftyReg-2.5.0/RNiftyReg/DESCRIPTION | 26 RNiftyReg-2.5.0/RNiftyReg/MD5 | 157 RNiftyReg-2.5.0/RNiftyReg/NEWS | 16 RNiftyReg-2.5.0/RNiftyReg/R/affine.R | 21 RNiftyReg-2.5.0/RNiftyReg/R/transform.R | 4 RNiftyReg-2.5.0/RNiftyReg/README.md | 25 RNiftyReg-2.5.0/RNiftyReg/src/DeformationField.cpp | 9 RNiftyReg-2.5.0/RNiftyReg/src/DeformationField.h | 6 RNiftyReg-2.5.0/RNiftyReg/src/Makevars | 6 RNiftyReg-2.5.0/RNiftyReg/src/aladin.cpp | 2 RNiftyReg-2.5.0/RNiftyReg/src/aladin.h | 2 RNiftyReg-2.5.0/RNiftyReg/src/f3d.cpp | 8 RNiftyReg-2.5.0/RNiftyReg/src/f3d.h | 2 RNiftyReg-2.5.0/RNiftyReg/src/main.cpp | 163 RNiftyReg-2.5.0/RNiftyReg/src/nifti1_io.h |only RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/AladinContent.cpp |only RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/AladinContent.h |only RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/ConvolutionKernel.h | 4 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/KernelFactory.h | 4 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/Kernels.h | 4 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/OptimiseKernel.h | 2 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/Platform.cpp | 98 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/Platform.h | 21 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/ResampleImageKernel.h | 4 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/_reg_aladin.cpp | 1098 +--- RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/_reg_aladin.h | 523 +- RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/_reg_aladin_sym.cpp | 192 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/_reg_aladin_sym.h | 84 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/_reg_base.cpp | 352 - RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/_reg_base.h | 76 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/_reg_f3d.cpp | 533 +- RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/_reg_f3d.h | 19 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/_reg_f3d2.cpp | 64 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/_reg_f3d2.h | 4 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/_reg_f3d_sym.cpp | 280 - RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/_reg_f3d_sym.h | 7 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/CPUAffineDeformationFieldKernel.cpp | 14 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/CPUAffineDeformationFieldKernel.h | 9 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/CPUBlockMatchingKernel.cpp | 7 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/CPUBlockMatchingKernel.h | 13 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/CPUConvolutionKernel.cpp | 3 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/CPUConvolutionKernel.h | 3 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/CPUKernelFactory.cpp | 6 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/CPUKernelFactory.h | 4 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/CPUOptimiseKernel.cpp | 4 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/CPUOptimiseKernel.h | 10 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/CPUResampleImageKernel.cpp | 30 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/CPUResampleImageKernel.h | 9 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_blockMatching.cpp | 2490 ++------- RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_blockMatching.h | 103 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_globalTrans.cpp | 886 ++- RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_globalTrans.h | 116 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_localTrans.cpp | 841 +-- RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_localTrans.h | 211 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_localTrans_jac.cpp |only RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_localTrans_jac.h |only RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_localTrans_regul.cpp |only RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_localTrans_regul.h |only RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_maths.cpp | 1551 +++--- RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_maths.h | 176 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_maths_eigen.cpp |only RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_maths_eigen.h |only RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_measure.h | 54 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_nmi.cpp | 519 +- RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_nmi.h | 113 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_optimiser.cpp | 26 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_optimiser.h | 4 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_resampling.cpp | 2527 +++++----- RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_resampling.h | 16 RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_splineBasis.cpp |only RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_splineBasis.h |only RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_tools.cpp | 574 +- RNiftyReg-2.5.0/RNiftyReg/src/reg-lib/cpu/_reg_tools.h | 58 RNiftyReg-2.5.0/RNiftyReg/tests/testthat/test-15-affine.R | 1 RNiftyReg-2.5.0/RNiftyReg/tests/testthat/test-30-multireg.R | 4 95 files changed, 7158 insertions(+), 7040 deletions(-)
Title: Bayesian Model Averaging with INLA
Description: Fit Spatial Econometrics models using Bayesian model averaging
on models fitted with INLA. The INLA package can be obtained from
<http://www.r-inla.org>.
Author: Virgilio Gómez-Rubio <virgilio.gomez@uclm.es>, Roger Bivand <Roger.Bivand@nhh.no>
Maintainer: Virgilio Gómez-Rubio <virgilio.gomez@uclm.es>
Diff between INLABMA versions 0.1-6 dated 2015-01-19 and 0.1-8 dated 2017-02-04
DESCRIPTION | 16 +++++++--------- MD5 | 9 ++++++--- NAMESPACE | 6 +++++- R/INLAMH.R |only R/SAC.R |only man/INLAMH.Rd |only man/sem.Rd | 20 +++++++++++++++++++- 7 files changed, 37 insertions(+), 14 deletions(-)
Title: Simple Features for R
Description: Support for simple features, a standardized way to encode spatial data, with bindings
to GDAL, GEOS and Proj.4.
Author: Edzer Pebesma [aut, cre],
Roger Bivand [ctb],
Ian Cook [ctb],
Tim Keitt [ctb],
Michael Sumner [ctb],
Robin Lovelace [ctb],
Hadley Wickham [ctb],
Jeroen Ooms [ctb],
Etienne Racine [ctb]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between sf versions 0.3-1 dated 2017-01-31 and 0.3-2 dated 2017-02-04
DESCRIPTION | 8 +- LICENSE | 2 MD5 | 55 ++++++++-------- NAMESPACE | 9 ++ R/RcppExports.R | 2 R/db.R | 2 R/geom.R | 32 ++++++--- R/graticule.R | 53 +++++++++++++--- R/init.R | 2 R/join.R |only R/maps.R | 8 +- R/read.R | 3 R/sf.R | 24 +++++++ R/sfc.R | 14 +++- R/tidy.R | 11 ++- inst/doc/sf1.html | 31 ++++----- inst/doc/sf2.html | 10 +-- man/dplyr.Rd | 30 ++++++++- man/geos.Rd | 6 - man/merge.sf.Rd |only man/st_graticule.Rd | 6 + man/st_join.Rd |only man/st_write.Rd | 2 src/RcppExports.cpp | 4 - src/geos.cpp | 22 +++++- tests/dplyr.Rout.save | 42 ++++++++---- tests/geos.R | 22 +++--- tests/geos.Rout.save | 24 +++---- tests/sfc.R | 27 +++++++- tests/sfc.Rout.save | 163 ++++++++++++++++++++++++++++++++++++++++++++++---- 30 files changed, 468 insertions(+), 146 deletions(-)
Title: Sample Size Calculations for Case-Control Studies
Description: To determine sample size for case-control studies to be analyzed using logistic regression.
Author: Mitchell H. Gail
Maintainer: William Wheeler <WheelerB@imsweb.com>
Diff between samplesizelogisticcasecontrol versions 0.0.5 dated 2016-09-20 and 0.0.6 dated 2017-02-04
DESCRIPTION | 8 MD5 | 10 R/sampleSize_binary.R | 322 ++++++++++---------- R/sampleSize_contF.R | 780 +++++++++++++++++++++++++------------------------- R/sampleSize_pmf.R | 332 ++++++++++----------- inst/doc/vignette.pdf |binary 6 files changed, 743 insertions(+), 709 deletions(-)
More information about samplesizelogisticcasecontrol at CRAN
Permanent link
Title: Luck-Corrected Peer Performance Analysis in R
Description: Provides functions to perform the peer performance
analysis of funds' returns as described in Ardia and Boudt (2016) <doi:10.2139/ssrn.2000901>.
Author: David Ardia [aut, cre],
Kris Boudt [aut]
Maintainer: David Ardia <david.ardia.ch@gmail.com>
Diff between PeerPerformance versions 2.1.1 dated 2017-01-29 and 2.1.2 dated 2017-02-04
DESCRIPTION | 10 +++++--- MD5 | 14 +++++------ NEWS | 3 ++ R/PeerPerformance.R | 9 ++++--- README.md | 32 +++++++++++++++++++++++++-- build/partial.rdb |binary inst/CITATION | 58 ++++++++++++++++++++++++------------------------- man/PeerPerformance.Rd | 10 +++++--- 8 files changed, 86 insertions(+), 50 deletions(-)
More information about PeerPerformance at CRAN
Permanent link
Title: Tracking the Progress of Mc*pply with Progress Bar
Description: A light-weight package helps you track and visualize
the progress of parallel version of vectorized R functions (mc*apply).
The package works on *nix (Linux, Unix such as macOS) system only due to
the lack of fork() functionality, which is essential for mc*apply, on Windows.
Author: Kevin Kuang (aut), Francesco Napolitano (ctb)
Maintainer: Kevin kuang <kvn.kuang@mail.utoronto.ca>
Diff between pbmcapply versions 1.1.3 dated 2016-12-14 and 1.2.0 dated 2017-02-04
DESCRIPTION | 8 +++--- MD5 | 16 ++++++++----- NAMESPACE | 4 +-- R/pbmclapply.R | 47 ++++++++++---------------------------- R/pbmcmapply.R | 61 ++++++++++++++++---------------------------------- R/progressBar.R |only R/txtProgressBarETA.R |only R/utils.R |only man/pbmclapply.Rd | 16 ++++++------- man/pbmcmapply.Rd | 18 +++++++------- man/progressBar.Rd |only 11 files changed, 66 insertions(+), 104 deletions(-)
Title: An API Wrapper for the Bureau of Labor Statistics (BLS)
Description: Scrapes various data from the Bureau of Labor Statistics, which is the statistical branch of the United States Department of Labor. The package has additional functions to help parse, analyze and visualize the data.
Author: Kris Eberwein [aut, cre]
Maintainer: Kris Eberwein <eberwein@knights.ucf.edu>
Diff between blscrapeR versions 2.1.1 dated 2017-01-27 and 2.1.2 dated 2017-02-04
DESCRIPTION | 11 +--- MD5 | 46 ++++++++-------- NAMESPACE | 8 -- NEWS.md | 29 ++++++++-- R/bls_api.R | 36 +++++-------- R/dateCast.R |only R/get_bls_county.R | 7 +- R/get_bls_state.R | 17 ++---- R/inflation.R | 65 ++++++++--------------- R/maps.R | 82 ++++++++++++++---------------- R/qcew_api.R | 3 - README.md | 15 ++--- data/county_map_data.rda |binary data/county_map_merc.rda |binary inst/doc/Employment_and_Unemployment.html | 4 - inst/doc/Inflation_and_Prices.html | 4 - inst/doc/Mapping_BLS_Data.html | 4 - inst/doc/Pay_and_Benefits.html | 4 - inst/doc/QCEW_API.html | 4 - inst/doc/qcew.html | 4 - man/bls_map_county.Rd | 9 ++- man/bls_map_state.Rd | 11 +++- man/dateCast.Rd |only tests/testthat/test_bls_api.R | 23 ++------ tests/testthat/test_bls_csv.R | 18 ++---- 25 files changed, 194 insertions(+), 210 deletions(-)