Title: Fault Tolerant Simple Network of Workstations
Description: Extension of the snow package supporting fault tolerant and reproducible applications, as well as supporting easy-to-use parallel programming - only one function is needed. Dynamic cluster size is also available.
Author: Hana Sevcikova, A. J. Rossini
Maintainer: Hana Sevcikova <hanas@uw.edu>
Diff between snowFT versions 1.5-0 dated 2017-05-26 and 1.6-0 dated 2017-06-17
ChangeLog | 4 ++ DESCRIPTION | 14 +++---- MD5 | 24 ++++++------ NAMESPACE | 1 R/mpi.R | 5 +- R/snowFT.R | 95 +++++++++++++++++++++++++++++++----------------- R/sock.R | 5 +- man/snowFT-cluster.Rd | 78 +++++++++++++++++++++++---------------- man/snowFT-package.Rd | 27 +++++++------ man/snowFT-rand.Rd | 33 +++++++++++----- man/snowFT-startstop.Rd | 15 +++++-- tests/run_tests.R | 3 + tests/test_functions.R | 13 ++++++ 13 files changed, 199 insertions(+), 118 deletions(-)
Title: Forecasting Functions for Time Series and Linear Models
Description: Methods and tools for displaying and analysing
univariate time series forecasts including exponential smoothing
via state space models and automatic ARIMA modelling.
Author: Rob Hyndman [aut, cre, cph],
Mitchell O'Hara-Wild [aut],
Christoph Bergmeir [aut],
Slava Razbash [aut],
Earo Wang [aut]
Maintainer: Rob Hyndman <Rob.Hyndman@monash.edu>
Diff between forecast versions 8.0 dated 2017-02-23 and 8.1 dated 2017-06-17
forecast-8.0/forecast/man/BoxCoxlambda.Rd |only forecast-8.0/forecast/man/arima.Rd |only forecast-8.0/forecast/man/components.Rd |only forecast-8.0/forecast/man/diebold.mariano.test.Rd |only forecast-8.0/forecast/man/forecastplot.Rd |only forecast-8.0/forecast/man/is.model.Rd |only forecast-8.0/forecast/man/mforecast.Rd |only forecast-8.0/forecast/man/numberdiffs.Rd |only forecast-8.0/forecast/man/residuals.Rd |only forecast-8.0/forecast/man/seas.adj.Rd |only forecast-8.0/forecast/man/seasonal.dummy.Rd |only forecast-8.0/forecast/man/simulate.Rd |only forecast-8.0/forecast/man/sindex.Rd |only forecast-8.0/forecast/man/spline.f.Rd |only forecast-8.0/forecast/man/subsetts.Rd |only forecast-8.0/forecast/man/theta.Rd |only forecast-8.0/forecast/man/ts.display.Rd |only forecast-8.0/forecast/man/tscv.Rd |only forecast-8.1/forecast/ChangeLog | 13 forecast-8.1/forecast/DESCRIPTION | 9 forecast-8.1/forecast/MD5 | 285 ++++----- forecast-8.1/forecast/NAMESPACE | 361 ++++++++--- forecast-8.1/forecast/R/DM2.R | 60 + forecast-8.1/forecast/R/HoltWintersNew.R | 89 ++ forecast-8.1/forecast/R/acf.R | 81 ++ forecast-8.1/forecast/R/arfima.R | 66 ++ forecast-8.1/forecast/R/arima.R | 315 ++++++++++ forecast-8.1/forecast/R/armaroots.R | 40 + forecast-8.1/forecast/R/attach.R | 2 forecast-8.1/forecast/R/baggedETS.R | 92 ++- forecast-8.1/forecast/R/bats.R | 100 +++ forecast-8.1/forecast/R/bootstrap.R | 26 forecast-8.1/forecast/R/calendar.R | 45 + forecast-8.1/forecast/R/checkresiduals.R | 84 ++ forecast-8.1/forecast/R/clean.R | 69 ++ forecast-8.1/forecast/R/components.R | 32 + forecast-8.1/forecast/R/data.R |only forecast-8.1/forecast/R/dshw.r | 80 ++ forecast-8.1/forecast/R/errors.R | 85 ++ forecast-8.1/forecast/R/ets.R | 248 +++++++- forecast-8.1/forecast/R/etsforecast.R | 64 ++ forecast-8.1/forecast/R/fitBATS.R | 2 forecast-8.1/forecast/R/fitTBATS.R | 2 forecast-8.1/forecast/R/forecast-package.R |only forecast-8.1/forecast/R/forecast.R | 459 +++++++++++---- forecast-8.1/forecast/R/forecast.varest.R | 1 forecast-8.1/forecast/R/forecast2.R | 250 ++++++++ forecast-8.1/forecast/R/forecastBATS.R | 83 ++ forecast-8.1/forecast/R/forecastTBATS.R | 33 - forecast-8.1/forecast/R/getResponse.R | 36 + forecast-8.1/forecast/R/ggplot.R | 672 ++++++++++++++++++---- forecast-8.1/forecast/R/graph.R | 118 +++ forecast-8.1/forecast/R/guerrero.R | 36 + forecast-8.1/forecast/R/lm.R | 140 ++++ forecast-8.1/forecast/R/mforecast.R | 172 +++++ forecast-8.1/forecast/R/msts.R | 33 + forecast-8.1/forecast/R/naive.R | 80 ++ forecast-8.1/forecast/R/newarima2.R | 195 +++++- forecast-8.1/forecast/R/nnetar.R | 183 +++++ forecast-8.1/forecast/R/residuals.R | 80 ++ forecast-8.1/forecast/R/seasadj.R | 29 forecast-8.1/forecast/R/season.R | 356 +++++++++++ forecast-8.1/forecast/R/simulate.R | 72 ++ forecast-8.1/forecast/R/spline.R | 77 ++ forecast-8.1/forecast/R/subset.R | 49 + forecast-8.1/forecast/R/tbats.R | 116 +++ forecast-8.1/forecast/R/theta.R | 61 + forecast-8.1/forecast/R/tscv.R | 67 ++ forecast-8.1/forecast/R/tsdiag.R | 1 forecast-8.1/forecast/README.md | 11 forecast-8.1/forecast/build/vignette.rds |binary forecast-8.1/forecast/inst/doc/JSS2008.R | 2 forecast-8.1/forecast/inst/doc/JSS2008.Rmd | 42 - forecast-8.1/forecast/inst/doc/JSS2008.pdf |binary forecast-8.1/forecast/man/Acf.Rd | 119 ++- forecast-8.1/forecast/man/Arima.Rd |only forecast-8.1/forecast/man/BoxCox.Rd | 61 + forecast-8.1/forecast/man/BoxCox.lambda.Rd |only forecast-8.1/forecast/man/CV.Rd | 29 forecast-8.1/forecast/man/CVar.Rd | 51 + forecast-8.1/forecast/man/accuracy.Rd | 100 ++- forecast-8.1/forecast/man/arfima.Rd | 100 ++- forecast-8.1/forecast/man/arima.errors.Rd |only forecast-8.1/forecast/man/arimaorder.Rd | 41 - forecast-8.1/forecast/man/auto.arima.Rd | 152 +++- forecast-8.1/forecast/man/autolayer.Rd | 26 forecast-8.1/forecast/man/autoplot.acf.Rd | 102 ++- forecast-8.1/forecast/man/autoplot.seas.Rd | 60 + forecast-8.1/forecast/man/autoplot.ts.Rd | 73 +- forecast-8.1/forecast/man/baggedETS.Rd | 58 + forecast-8.1/forecast/man/bats.Rd | 103 ++- forecast-8.1/forecast/man/bizdays.Rd | 35 - forecast-8.1/forecast/man/bld.mbb.bootstrap.Rd | 48 - forecast-8.1/forecast/man/checkresiduals.Rd | 52 + forecast-8.1/forecast/man/croston.Rd | 106 +-- forecast-8.1/forecast/man/dm.test.Rd |only forecast-8.1/forecast/man/dshw.Rd | 117 ++- forecast-8.1/forecast/man/easter.Rd | 37 - forecast-8.1/forecast/man/ets.Rd | 174 +++-- forecast-8.1/forecast/man/figures |only forecast-8.1/forecast/man/findfrequency.Rd | 33 - forecast-8.1/forecast/man/fitted.Arima.Rd | 64 +- forecast-8.1/forecast/man/forecast-package.Rd |only forecast-8.1/forecast/man/forecast.Arima.Rd | 136 ++-- forecast-8.1/forecast/man/forecast.HoltWinters.Rd | 93 +-- forecast-8.1/forecast/man/forecast.Rd | 139 +++- forecast-8.1/forecast/man/forecast.StructTS.Rd | 87 +- forecast-8.1/forecast/man/forecast.baggedETS.Rd | 79 +- forecast-8.1/forecast/man/forecast.bats.Rd | 85 +- forecast-8.1/forecast/man/forecast.ets.Rd | 100 ++- forecast-8.1/forecast/man/forecast.lm.Rd | 95 ++- forecast-8.1/forecast/man/forecast.mlm.Rd | 89 +- forecast-8.1/forecast/man/forecast.mts.Rd |only forecast-8.1/forecast/man/forecast.nnetar.Rd | 125 ++-- forecast-8.1/forecast/man/forecast.stl.Rd | 203 ++++-- forecast-8.1/forecast/man/fourier.Rd | 59 + forecast-8.1/forecast/man/gas.Rd | 22 forecast-8.1/forecast/man/geom_forecast.Rd | 125 ++-- forecast-8.1/forecast/man/getResponse.Rd | 46 + forecast-8.1/forecast/man/gghistogram.Rd | 35 - forecast-8.1/forecast/man/gglagplot.Rd | 65 +- forecast-8.1/forecast/man/ggmonthplot.Rd | 39 - forecast-8.1/forecast/man/gold.Rd | 20 forecast-8.1/forecast/man/is.constant.Rd | 11 forecast-8.1/forecast/man/is.ets.Rd |only forecast-8.1/forecast/man/is.forecast.Rd | 13 forecast-8.1/forecast/man/ma.Rd | 53 + forecast-8.1/forecast/man/meanf.Rd | 88 +- forecast-8.1/forecast/man/monthdays.Rd | 33 - forecast-8.1/forecast/man/msts.Rd | 48 + forecast-8.1/forecast/man/na.interp.Rd | 39 - forecast-8.1/forecast/man/naive.Rd | 115 ++- forecast-8.1/forecast/man/ndiffs.Rd |only forecast-8.1/forecast/man/nnetar.Rd | 107 ++- forecast-8.1/forecast/man/plot.Arima.Rd | 56 + forecast-8.1/forecast/man/plot.bats.Rd | 49 + forecast-8.1/forecast/man/plot.ets.Rd | 43 - forecast-8.1/forecast/man/plot.forecast.Rd |only forecast-8.1/forecast/man/plot.mforecast.Rd | 68 +- forecast-8.1/forecast/man/reexports.Rd | 3 forecast-8.1/forecast/man/residuals.forecast.Rd |only forecast-8.1/forecast/man/seasadj.Rd |only forecast-8.1/forecast/man/seasonal.Rd |only forecast-8.1/forecast/man/seasonaldummy.Rd |only forecast-8.1/forecast/man/seasonplot.Rd | 87 +- forecast-8.1/forecast/man/ses.Rd | 149 +++- forecast-8.1/forecast/man/simulate.ets.Rd |only forecast-8.1/forecast/man/sindexf.Rd |only forecast-8.1/forecast/man/splinef.Rd |only forecast-8.1/forecast/man/subset.ts.Rd |only forecast-8.1/forecast/man/taylor.Rd | 28 forecast-8.1/forecast/man/tbats.Rd | 109 ++- forecast-8.1/forecast/man/tbats.components.Rd | 39 - forecast-8.1/forecast/man/thetaf.Rd |only forecast-8.1/forecast/man/tsCV.Rd |only forecast-8.1/forecast/man/tsclean.Rd | 37 - forecast-8.1/forecast/man/tsdisplay.Rd |only forecast-8.1/forecast/man/tslm.Rd | 64 +- forecast-8.1/forecast/man/tsoutliers.Rd | 33 - forecast-8.1/forecast/man/wineind.Rd | 21 forecast-8.1/forecast/man/woolyrnq.Rd | 21 forecast-8.1/forecast/src/etscalc.c | 8 forecast-8.1/forecast/tests/testthat/test-arima.R | 2 forecast-8.1/forecast/vignettes/JSS2008.Rmd | 42 - 164 files changed, 8232 insertions(+), 2221 deletions(-)
Title: An 'Rcpp' Interface to Active Bindings
Description: Provides an easy way to fill an environment with active bindings
that call a C++ function.
Author: Kirill Müller [aut, cre],
RStudio [cph]
Maintainer: Kirill Müller <krlmlr+r@mailbox.org>
Diff between bindrcpp versions 0.1 dated 2016-12-11 and 0.2 dated 2017-06-17
DESCRIPTION | 10 +++++----- MD5 | 16 ++++++++-------- NEWS.md | 7 +++++++ inst/include/bindrcpp_RcppExports.h | 8 ++++---- man/bindrcpp-package.Rd | 1 - man/init_logging.Rd | 1 - src/Makevars | 11 ----------- src/Makevars.win | 2 -- src/RcppExports.cpp | 18 ++++++++++++++++++ 9 files changed, 42 insertions(+), 32 deletions(-)
Title: Trajectory Miner: a Toolbox for Exploring and Rendering
Sequences
Description: Toolbox for the manipulation, description and rendering of sequences, and more generally the mining of sequence data in the field of social sciences. Although the toolbox is primarily intended for analyzing state or event sequences that describe life courses such as family formation histories or professional careers, its features also apply to many other kinds of categorical sequence data. It accepts many different sequence representations as input and provides tools for converting sequences from one format to another. It offers several functions for describing and rendering sequences, for computing distances between sequences with different metrics (among which optimal matching), original dissimilarity-based analysis tools, and simple functions for extracting the most frequent subsequences and identifying the most discriminating ones among them. A user's guide can be found on the TraMineR web page.
Author: Alexis Gabadinho [aut, cph],
Matthias Studer [aut, cph],
Nicolas Müller [aut],
Reto Bürgin [aut],
Pierre-Alexandre Fonta [aut],
Gilbert Ritschard [aut, cre, cph]
Maintainer: Gilbert Ritschard <gilbert.ritschard@unige.ch>
Diff between TraMineR versions 2.0-5 dated 2017-05-15 and 2.0-6 dated 2017-06-17
TraMineR-2.0-5/TraMineR/R/BIOSPELL_to_STS.R |only TraMineR-2.0-5/TraMineR/R/SPELL_to_STS.R |only TraMineR-2.0-5/TraMineR/R/SPS_to_STS.R |only TraMineR-2.0-5/TraMineR/R/STS_to_DSS.R |only TraMineR-2.0-5/TraMineR/R/STS_to_SPS.R |only TraMineR-2.0-5/TraMineR/R/STS_to_SRS.R |only TraMineR-2.0-5/TraMineR/R/STS_to_TSE.R |only TraMineR-2.0-5/TraMineR/R/TraMineR-is.a.number.R |only TraMineR-2.0-5/TraMineR/R/TraMineR-is.positive.integer.R |only TraMineR-2.0-6/TraMineR/DESCRIPTION | 8 TraMineR-2.0-6/TraMineR/MD5 | 60 - TraMineR-2.0-6/TraMineR/NAMESPACE | 138 +-- TraMineR-2.0-6/TraMineR/NEWS | 81 + TraMineR-2.0-6/TraMineR/R/TraMineR-check_helpers.R |only TraMineR-2.0-6/TraMineR/R/TraMineR-is_helpers.R |only TraMineR-2.0-6/TraMineR/R/TraMineR-logging_helpers.R | 19 TraMineR-2.0-6/TraMineR/R/TraMineRInternal.R | 4 TraMineR-2.0-6/TraMineR/R/seqdef.R | 2 TraMineR-2.0-6/TraMineR/R/seqdist.R | 16 TraMineR-2.0-6/TraMineR/R/seqecreate.R | 2 TraMineR-2.0-6/TraMineR/R/seqformat-SPELL_to_STS.R |only TraMineR-2.0-6/TraMineR/R/seqformat-SPS_to_STS.R |only TraMineR-2.0-6/TraMineR/R/seqformat-STS_to_DSS.R |only TraMineR-2.0-6/TraMineR/R/seqformat-STS_to_SPELL.R |only TraMineR-2.0-6/TraMineR/R/seqformat-STS_to_SPS.R |only TraMineR-2.0-6/TraMineR/R/seqformat-STS_to_SRS.R |only TraMineR-2.0-6/TraMineR/R/seqformat-STS_to_TSE.R |only TraMineR-2.0-6/TraMineR/R/seqformat.R | 464 +++++++---- TraMineR-2.0-6/TraMineR/R/seqient.R | 8 TraMineR-2.0-6/TraMineR/R/seqstatl.R | 6 TraMineR-2.0-6/TraMineR/R/seqtab.R | 4 TraMineR-2.0-6/TraMineR/R/seqtree.R | 2 TraMineR-2.0-6/TraMineR/R/stslist-methods.R | 10 TraMineR-2.0-6/TraMineR/inst/NEWS.Rd | 127 ++- TraMineR-2.0-6/TraMineR/inst/doc/TraMineR-state-sequence.pdf |binary TraMineR-2.0-6/TraMineR/man/TraMineR-package.Rd | 2 TraMineR-2.0-6/TraMineR/man/TraMineRInternal.Rd | 17 TraMineR-2.0-6/TraMineR/man/actcal.tse.Rd | 4 TraMineR-2.0-6/TraMineR/man/seqdist.Rd | 11 TraMineR-2.0-6/TraMineR/man/seqformat.Rd | 452 +++++++--- 40 files changed, 990 insertions(+), 447 deletions(-)
Title: Web Crawler and Scraper
Description: Performs parallel web crawling and web scraping. It is designed to crawl, parse and store web pages to produce data that can be directly used for analysis application. For details see Khalil and Fakir (2017) <DOI:10.1016/j.softx.2017.04.004>.
Author: Salim Khalil [aut, cre]
Maintainer: Salim Khalil <khalilsalim1@gmail.com>
Diff between Rcrawler versions 0.1 dated 2017-06-15 and 0.1.1 dated 2017-06-17
DESCRIPTION | 7 ++++--- MD5 | 8 ++++---- R/Rcrawlerp.R | 32 +++++++++++++++++--------------- inst/java/SimHash.jar |binary man/Rcrawler.Rd | 33 ++++++++++++++++++--------------- 5 files changed, 43 insertions(+), 37 deletions(-)
Title: Test Analysis Modules
Description: Includes marginal maximum likelihood estimation of uni- and
multidimensional item response models (Rasch, 2PL, 3PL,
Generalized Partial Credit, Multi Facets,
Nominal Item Response, Structured Latent Class Analysis,
Mixture Distribution IRT Models, Located Latent Class Models)
and joint maximum likelihood estimation for models
from the Rasch family.
Latent regression models and plausible value imputation are
also supported.
Author: Alexander Robitzsch [aut, cre], Thomas Kiefer [aut], Margaret Wu [aut]
Maintainer: Alexander Robitzsch <robitzsch@ipn.uni-kiel.de>
Diff between TAM versions 2.1-43 dated 2017-05-11 and 2.2-49 dated 2017-06-17
TAM-2.1-43/TAM/R/dmvnorm_TAM.R |only TAM-2.1-43/TAM/R/tam_acceleration_algorithm.R |only TAM-2.1-43/TAM/R/tam_mml_3pl_ic_compute_criteria.R |only TAM-2.2-49/TAM/DESCRIPTION | 10 TAM-2.2-49/TAM/MD5 | 208 +- TAM-2.2-49/TAM/NAMESPACE | 23 TAM-2.2-49/TAM/R/EAPrel.R |only TAM-2.2-49/TAM/R/RcppExports.R | 4 TAM-2.2-49/TAM/R/TAM-internal_helper.R | 26 TAM-2.2-49/TAM/R/WLErel.R | 17 TAM-2.2-49/TAM/R/WLErel_exclude_missings.R |only TAM-2.2-49/TAM/R/plot.tam.pv.mcmc.R |only TAM-2.2-49/TAM/R/print.tam.R | 11 TAM-2.2-49/TAM/R/print.tam.wle.R | 41 TAM-2.2-49/TAM/R/prior_list_include.R |only TAM-2.2-49/TAM/R/summary.tam.R | 9 TAM-2.2-49/TAM/R/summary.tam.fit.R | 4 TAM-2.2-49/TAM/R/summary.tam.linking.R |only TAM-2.2-49/TAM/R/summary.tam.pv.mcmc.R |only TAM-2.2-49/TAM/R/summary.tam.wle.R |only TAM-2.2-49/TAM/R/summary.tam_linking_2studies.R |only TAM-2.2-49/TAM/R/tam.latreg.R | 118 - TAM-2.2-49/TAM/R/tam.linking.R |only TAM-2.2-49/TAM/R/tam.mml.2pl.R | 269 --- TAM-2.2-49/TAM/R/tam.mml.3pl.R | 258 --- TAM-2.2-49/TAM/R/tam.mml.R | 320 +-- TAM-2.2-49/TAM/R/tam.mml.mfr.R | 821 ++-------- TAM-2.2-49/TAM/R/tam.mml.wle.R |only TAM-2.2-49/TAM/R/tam.mml.wle2.R |only TAM-2.2-49/TAM/R/tam.pv.R | 260 +-- TAM-2.2-49/TAM/R/tam.pv.mcmc.R |only TAM-2.2-49/TAM/R/tam.wle.R | 589 ------- TAM-2.2-49/TAM/R/tam_01_pattern.R |only TAM-2.2-49/TAM/R/tam_AXsi_compute.R |only TAM-2.2-49/TAM/R/tam_AXsi_fit.R |only TAM-2.2-49/TAM/R/tam_NA_pattern.R |only TAM-2.2-49/TAM/R/tam_Rhat_3splits.R |only TAM-2.2-49/TAM/R/tam_accelerate_parameters.R |only TAM-2.2-49/TAM/R/tam_acf_matrix.R |only TAM-2.2-49/TAM/R/tam_calc_posterior.R | 2 TAM-2.2-49/TAM/R/tam_dmvnorm.R |only TAM-2.2-49/TAM/R/tam_dtnorm.R | 6 TAM-2.2-49/TAM/R/tam_evaluate_prior.R |only TAM-2.2-49/TAM/R/tam_interval_index.R |only TAM-2.2-49/TAM/R/tam_irf_3pl.R |only TAM-2.2-49/TAM/R/tam_jml_version2.R | 3 TAM-2.2-49/TAM/R/tam_jml_version2_calc_xsi.R | 115 - TAM-2.2-49/TAM/R/tam_latreg_ic.R | 13 TAM-2.2-49/TAM/R/tam_linking_2studies.R |only TAM-2.2-49/TAM/R/tam_linking_extract_list.R |only TAM-2.2-49/TAM/R/tam_linking_extract_parameters.R |only TAM-2.2-49/TAM/R/tam_linking_include_list.R |only TAM-2.2-49/TAM/R/tam_linking_output_summary.R |only TAM-2.2-49/TAM/R/tam_linking_parameters_select_common_items.R |only TAM-2.2-49/TAM/R/tam_linking_transform_item_parameters.R |only TAM-2.2-49/TAM/R/tam_mml_3pl_calc_prob.R | 30 TAM-2.2-49/TAM/R/tam_mml_3pl_ic.R | 2 TAM-2.2-49/TAM/R/tam_mml_3pl_inits_group.R |only TAM-2.2-49/TAM/R/tam_mml_3pl_mstep_item_intercepts.R | 8 TAM-2.2-49/TAM/R/tam_mml_3pl_mstep_item_slopes.R | 38 TAM-2.2-49/TAM/R/tam_mml_3pl_mstep_regression.R | 2 TAM-2.2-49/TAM/R/tam_mml_compute_deviance.R | 24 TAM-2.2-49/TAM/R/tam_mml_create_nodes.R | 15 TAM-2.2-49/TAM/R/tam_mml_ic.R | 30 TAM-2.2-49/TAM/R/tam_mml_ic_criteria.R |only TAM-2.2-49/TAM/R/tam_mml_inits_beta.R |only TAM-2.2-49/TAM/R/tam_mml_inits_groups.R |only TAM-2.2-49/TAM/R/tam_mml_inits_variance.R |only TAM-2.2-49/TAM/R/tam_mml_inits_xsi.R |only TAM-2.2-49/TAM/R/tam_mml_mfr_collect_xsi_parameters.R |only TAM-2.2-49/TAM/R/tam_mml_mfr_inits_beta.R |only TAM-2.2-49/TAM/R/tam_mml_mfr_inits_xsi.R |only TAM-2.2-49/TAM/R/tam_mml_mfr_proc_compute_maxKi.R |only TAM-2.2-49/TAM/R/tam_mml_mfr_proc_create_design_matrices.R |only TAM-2.2-49/TAM/R/tam_mml_mfr_proc_delete_missing_items.R |only TAM-2.2-49/TAM/R/tam_mml_mfr_proc_multiple_person_ids.R |only TAM-2.2-49/TAM/R/tam_mml_mfr_proc_response_indicators.R |only TAM-2.2-49/TAM/R/tam_mml_mfr_proc_xsi_setnull.R |only TAM-2.2-49/TAM/R/tam_mml_mstep_intercept.R | 28 TAM-2.2-49/TAM/R/tam_mml_mstep_regression.R | 24 TAM-2.2-49/TAM/R/tam_mml_proc_est_xsi_index.R |only TAM-2.2-49/TAM/R/tam_mml_proc_prior_list_xsi.R |only TAM-2.2-49/TAM/R/tam_mml_proc_response_indicators.R |only TAM-2.2-49/TAM/R/tam_mml_proc_unidim_simplify.R |only TAM-2.2-49/TAM/R/tam_mml_proc_xsi_parameter_index_A.R |only TAM-2.2-49/TAM/R/tam_mml_progress_em.R | 13 TAM-2.2-49/TAM/R/tam_mml_sufficient_statistics.R |only TAM-2.2-49/TAM/R/tam_mml_wle_check_identifiability.R |only TAM-2.2-49/TAM/R/tam_mml_wle_postproc.R |only TAM-2.2-49/TAM/R/tam_mml_wle_proc_input_data.R |only TAM-2.2-49/TAM/R/tam_mml_wle_theta_inits.R |only TAM-2.2-49/TAM/R/tam_mml_wle_update_theta.R |only TAM-2.2-49/TAM/R/tam_normalize_vector.R |only TAM-2.2-49/TAM/R/tam_outer.R | 1 TAM-2.2-49/TAM/R/tam_prior_eval_log_density_one_parameter.R |only TAM-2.2-49/TAM/R/tam_pv_draw_pv_nonparametric.R |only TAM-2.2-49/TAM/R/tam_pv_draw_pv_normal_approximation_1dim.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_compute_marginal_likelihood.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_evaluate_likelihood.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_inits_MH_sampling_objects.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_inits_plausible_values_objects.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_inits_sampled_parameters_objects.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_inits_theta.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_likelihood.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_likelihood_R.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_parameter_samples.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_parameter_summary.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_person_inits_from_resp.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_postproc_ic.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_postproc_theta_acceptance_MH.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_postproc_theta_posterior.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_prior_density.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_proc_input.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_proc_regressors.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_proposal_theta.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_pv_acf.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_refresh_theta.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_sample_beta_variance.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_save_parameters.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_theta_MH_ratio_accept.R |only TAM-2.2-49/TAM/R/tam_pv_mcmc_update_plausible_values.R |only TAM-2.2-49/TAM/R/tam_pv_recommend_tam_pv_mcmc.R |only TAM-2.2-49/TAM/R/tam_pv_sampling_beta.R |only TAM-2.2-49/TAM/R/tam_pv_sampling_theta.R |only TAM-2.2-49/TAM/R/tam_remove_missings.R |only TAM-2.2-49/TAM/R/tam_rowCumsums.R |only TAM-2.2-49/TAM/R/tam_solve_ridge.R |only TAM-2.2-49/TAM/R/tam_trim_increment.R | 5 TAM-2.2-49/TAM/R/tam_vec2symmmatrix.R |only TAM-2.2-49/TAM/R/tam_wle_print_WLErel.R |only TAM-2.2-49/TAM/R/tam_wle_print_general.R |only TAM-2.2-49/TAM/R/tampv2datalist.R | 6 TAM-2.2-49/TAM/R/weighted_mean.R | 6 TAM-2.2-49/TAM/data/data.ex16.rda |only TAM-2.2-49/TAM/data/data.ex17.rda |only TAM-2.2-49/TAM/inst/NEWS | 41 TAM-2.2-49/TAM/man/IRT.itemfit.Rd | 2 TAM-2.2-49/TAM/man/IRT.residuals.Rd | 2 TAM-2.2-49/TAM/man/IRT.simulate.Rd | 4 TAM-2.2-49/TAM/man/IRTLikelihood.ctt.Rd | 2 TAM-2.2-49/TAM/man/TAM-defunct.Rd | 72 TAM-2.2-49/TAM/man/TAM-utilities.Rd | 34 TAM-2.2-49/TAM/man/data.examples.Rd | 57 TAM-2.2-49/TAM/man/msq.itemfit.Rd | 5 TAM-2.2-49/TAM/man/tam.fit.Rd | 6 TAM-2.2-49/TAM/man/tam.linking.Rd |only TAM-2.2-49/TAM/man/tam.mml.3pl.Rd | 12 TAM-2.2-49/TAM/man/tam.mml.Rd | 44 TAM-2.2-49/TAM/man/tam.pv.Rd | 112 + TAM-2.2-49/TAM/man/tam.wle.Rd | 30 TAM-2.2-49/TAM/man/tam_NA_pattern.Rd |only TAM-2.2-49/TAM/man/tam_irf_3pl.Rd |only TAM-2.2-49/TAM/man/weighted_Stats.Rd | 6 TAM-2.2-49/TAM/src/RcppExports.cpp | 16 TAM-2.2-49/TAM/src/init.c | 64 TAM-2.2-49/TAM/src/tam_pv_mcmc.cpp |only 156 files changed, 1380 insertions(+), 2488 deletions(-)
Title: Some Additional Multiple Imputation Functions, Especially for
'mice'
Description: Contains some auxiliary functions for multiple
imputation which complements existing functionality
in R.
In addition to some utility functions, main features
include plausible value imputation, multilevel
imputation functions, imputation using partial least
squares (PLS) for high dimensional predictors, nested
multiple imputation.
Author: Alexander Robitzsch [aut, cre], Simon Grund [aut],
Thorsten Henke [aut]
Maintainer: Alexander Robitzsch <robitzsch@ipn.uni-kiel.de>
Diff between miceadds versions 2.4-12 dated 2017-04-19 and 2.5-9 dated 2017-06-17
DESCRIPTION | 15 ++++----- MD5 | 17 ++++++---- NAMESPACE | 4 +- R/Rfunction_output_list_result_function.R |only R/save.data.R | 50 ++++++++++-------------------- R/save_data_calc_filename.R |only inst/CITATION |only inst/NEWS | 15 +++++++++ man/micombine.F.Rd | 2 - man/micombine.chisquare.Rd | 4 +- src/create_interactions_c.cpp | 8 ++-- 11 files changed, 59 insertions(+), 56 deletions(-)
Title: Exploratory Data Analysis and Data Preparation Tool-Box Book
Description: Around 10% of almost any predictive modeling project is spent in predictive modeling, 'funModeling' and the book Data Science Live Book (<http://livebook.datascienceheroes.com/>) are intended to cover remaining 90%: data preparation, profiling, selecting best variables 'dataViz', assessing model performance and other functions.
Author: Pablo Casas
Maintainer: Pablo Casas <pcasas.biz@gmail.com>
Diff between funModeling versions 1.6.3 dated 2017-06-03 and 1.6.4 dated 2017-06-17
DESCRIPTION | 8 +++--- MD5 | 6 ++-- R/data_preparation.R | 4 +-- R/numbers.R | 65 ++++++++++++++++++++++++++++++++++++--------------- 4 files changed, 56 insertions(+), 27 deletions(-)
Title: Cognitive Diagnosis Modeling
Description: Functions for cognitive diagnosis modeling
and multidimensional item response modeling for
dichotomous and polytomous data. This package
enables the estimation of the DINA and DINO model,
the multiple group (polytomous) GDINA model,
the multiple choice DINA model, the general diagnostic
model (GDM), the multidimensional linear compensatory
item response model and the structured latent class
model (SLCA).
Author: Alexander Robitzsch [aut, cre], Thomas Kiefer [aut],
Ann Cathrice George [aut], Ali Uenlue [aut]
Maintainer: Alexander Robitzsch <robitzsch@ipn.uni-kiel.de>
Diff between CDM versions 5.5-21 dated 2017-04-11 and 5.6-16 dated 2017-06-17
CDM-5.5-21/CDM/R/calc_posterior.R |only CDM-5.5-21/CDM/R/gdina.partable.R |only CDM-5.5-21/CDM/R/gdina.postproc.R |only CDM-5.5-21/CDM/R/gdina_hogdina_alg.R |only CDM-5.5-21/CDM/R/gdm_algorithm.R |only CDM-5.5-21/CDM/R/gdm_postproc.R |only CDM-5.5-21/CDM/R/gdm_preproc.R |only CDM-5.6-16/CDM/DESCRIPTION | 8 CDM-5.6-16/CDM/MD5 | 100 CDM-5.6-16/CDM/R/attach_environment.R |only CDM-5.6-16/CDM/R/cdm_calc_posterior.R |only CDM-5.6-16/CDM/R/cdm_tetrachoric.R |only CDM-5.6-16/CDM/R/din.R | 2 CDM-5.6-16/CDM/R/gdina.R | 1663 ++-------- CDM-5.6-16/CDM/R/gdina_attr_rpf_hogdina.R |only CDM-5.6-16/CDM/R/gdina_attribute_patterns_reduced_skillspace.R |only CDM-5.6-16/CDM/R/gdina_attribute_structure_hogdina.R |only CDM-5.6-16/CDM/R/gdina_calc_deviance.R |only CDM-5.6-16/CDM/R/gdina_calc_expected_counts.R |only CDM-5.6-16/CDM/R/gdina_calc_ic.R |only CDM-5.6-16/CDM/R/gdina_calc_individual_likelihood.R |only CDM-5.6-16/CDM/R/gdina_calc_individual_posterior.R |only CDM-5.6-16/CDM/R/gdina_calc_prob.R |only CDM-5.6-16/CDM/R/gdina_create_attribute_patterns.R |only CDM-5.6-16/CDM/R/gdina_create_designmatrices.R |only CDM-5.6-16/CDM/R/gdina_init_class_probabilities.R |only CDM-5.6-16/CDM/R/gdina_init_item_parameters.R |only CDM-5.6-16/CDM/R/gdina_itemfit.R |only CDM-5.6-16/CDM/R/gdina_maximum_parameter_change.R |only CDM-5.6-16/CDM/R/gdina_mstep_item_ml.R | 115 CDM-5.6-16/CDM/R/gdina_mstep_item_ml_rrum.R | 126 CDM-5.6-16/CDM/R/gdina_mstep_item_parameters.R |only CDM-5.6-16/CDM/R/gdina_mstep_item_parameters_designmatrix.R |only CDM-5.6-16/CDM/R/gdina_mstep_item_uls.R | 240 - CDM-5.6-16/CDM/R/gdina_partable.R |only CDM-5.6-16/CDM/R/gdina_post_calc_se.R |only CDM-5.6-16/CDM/R/gdina_post_pattern_output.R |only CDM-5.6-16/CDM/R/gdina_post_posterior_output.R |only CDM-5.6-16/CDM/R/gdina_post_skill_pattern.R |only CDM-5.6-16/CDM/R/gdina_probitem.R |only CDM-5.6-16/CDM/R/gdina_proc_check_admissible_rules.R |only CDM-5.6-16/CDM/R/gdina_proc_define_model_parameters.R |only CDM-5.6-16/CDM/R/gdina_proc_hogdina_theta_distribution.R |only CDM-5.6-16/CDM/R/gdina_proc_item_response_patterns.R |only CDM-5.6-16/CDM/R/gdina_proc_multiple_group_objects.R |only CDM-5.6-16/CDM/R/gdina_proc_noninvariance_multiple_groups.R | 3 CDM-5.6-16/CDM/R/gdina_proc_sequential_items.R | 6 CDM-5.6-16/CDM/R/gdina_proc_spec_rrum.R |only CDM-5.6-16/CDM/R/gdina_proc_split_item_response_patterns.R |only CDM-5.6-16/CDM/R/gdina_proc_uls_inverse_matrices.R |only CDM-5.6-16/CDM/R/gdina_progress_em_algorithm.R |only CDM-5.6-16/CDM/R/gdina_progress_start_estimation.R |only CDM-5.6-16/CDM/R/gdina_reduced_skillspace.R | 61 CDM-5.6-16/CDM/R/gdina_se_itemwise.R | 8 CDM-5.6-16/CDM/R/gdina_standardize_weights.R |only CDM-5.6-16/CDM/R/gdm.R | 367 -- CDM-5.6-16/CDM/R/gdm_Qmatrix.R |only CDM-5.6-16/CDM/R/gdm_calc_counts.R |only CDM-5.6-16/CDM/R/gdm_calc_deviance.R |only CDM-5.6-16/CDM/R/gdm_calc_distributionmoments.R |only CDM-5.6-16/CDM/R/gdm_calc_ic.R |only CDM-5.6-16/CDM/R/gdm_calc_post.R |only CDM-5.6-16/CDM/R/gdm_calc_prob.R |only CDM-5.6-16/CDM/R/gdm_collect_itempars.R |only CDM-5.6-16/CDM/R/gdm_constraints_itempars.R |only CDM-5.6-16/CDM/R/gdm_constraints_itempars2.R |only CDM-5.6-16/CDM/R/gdm_create_delta_designmatrix.R |only CDM-5.6-16/CDM/R/gdm_data_prep.R |only CDM-5.6-16/CDM/R/gdm_est_a.R |only CDM-5.6-16/CDM/R/gdm_est_a_cat.R |only CDM-5.6-16/CDM/R/gdm_est_b.R |only CDM-5.6-16/CDM/R/gdm_est_normalskills.R |only CDM-5.6-16/CDM/R/gdm_est_skillspace.R |only CDM-5.6-16/CDM/R/gdm_est_skillspace_traits.R |only CDM-5.6-16/CDM/R/gdm_numdiff_index.R |only CDM-5.6-16/CDM/R/gdm_person_parameters.R |only CDM-5.6-16/CDM/R/gdm_progress_em_algorithm.R |only CDM-5.6-16/CDM/R/gdm_thetadesign.R |only CDM-5.6-16/CDM/R/mcdina.R | 37 CDM-5.6-16/CDM/R/slca.R | 2 CDM-5.6-16/CDM/R/zzz.R | 10 CDM-5.6-16/CDM/inst/NEWS | 9 CDM-5.6-16/CDM/man/CDM-package.Rd | 221 - CDM-5.6-16/CDM/man/gdm.Rd | 2 84 files changed, 912 insertions(+), 2068 deletions(-)
Title: Parses LaTeX Documents for Errors
Description: Checks LaTeX documents and .bib files for typing errors, such as spelling errors, incorrect quotation marks. Also provides useful functions for parsing and linting bibliography files.
Author: Hugh Parsonage
Maintainer: Hugh Parsonage <hugh.parsonage@gmail.com>
Diff between TeXCheckR versions 0.1.1 dated 2017-04-09 and 0.2.0 dated 2017-06-17
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- R/check_spelling.R | 14 ++++++++------ R/lint_bib.R | 39 +++++++++++++++++++++++++++------------ man/check_spelling.Rd | 4 +++- tests/testthat/test_lint_bib.R | 2 ++ 6 files changed, 49 insertions(+), 28 deletions(-)
Title: Producing and Reproducing Results
Description: A system for embedded scientific computing and reproducible research with R.
The OpenCPU server exposes a simple but powerful HTTP api for RPC and data interchange
with R. This provides a reliable and scalable foundation for statistical services or
building R web applications. The OpenCPU server runs either as a single-user development
server within the interactive R session, or as a multi-user Linux stack based on Apache2.
The entire system is fully open source and permissively licensed. The OpenCPU website
has detailed documentation and example apps.
Author: Jeroen Ooms
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between opencpu versions 2.0.1 dated 2017-05-21 and 2.0.2 dated 2017-06-17
DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ NEWS | 3 +++ R/apps.R | 8 +++----- R/devtools.R | 13 +++++++++++-- R/httpget_webhook.R | 2 +- inst/doc/opencpu-paper.pdf |binary 7 files changed, 27 insertions(+), 17 deletions(-)
Title: Multivariate Functional Principal Component Analysis for Data
Observed on Different Dimensional Domains
Description: Calculate a multivariate functional principal component analysis
for data observed on different dimensional domains. The estimation algorithm
relies on univariate basis expansions for each element of the multivariate
functional data. Multivariate and univariate functional data objects are
represented by S4 classes for this type of data implemented in the package
'funData'.
Author: Clara Happ [aut, cre]
Maintainer: Clara Happ <clara.happ@stat.uni-muenchen.de>
Diff between MFPCA versions 1.0-1 dated 2016-08-12 and 1.1 dated 2017-06-17
DESCRIPTION | 10 - MD5 | 91 ++++++------ NAMESPACE | 8 - NEWS.md |only R/MFPCA_calculation.R | 130 ++++++++++++----- R/bootstrap.R |only R/univDecomp.R | 197 ++++++++++++++------------ R/univPCA.R | 74 ++++++--- R/univariateExpansions.R | 49 +++++- README.md |only configure |only inst/CITATION | 9 - man/FCP_TPA.Rd | 84 +++++------ man/MFPCA.Rd | 242 ++++++++++++++++++-------------- man/PACE.Rd | 76 +++++----- man/UMPCA.Rd | 36 ++-- man/calcBasisIntegrals.Rd | 2 man/calcMFPCA.Rd | 2 man/dct2D.Rd | 4 man/dct3D.Rd | 4 man/dctBasis2D.Rd | 74 ++++----- man/dctFunction2D.Rd | 38 ++--- man/expandBasisFunction.Rd | 14 - man/fcptpaBasis.Rd | 39 +++-- man/findAlphaVopt.Rd | 26 +-- man/fpcaBasis.Rd | 39 ++--- man/gcv.Rd | 14 - man/idct2D.Rd | 4 man/idct3D.Rd | 4 man/maxeig.Rd | 2 man/normVec.Rd | 2 man/splineBasis1D.Rd | 58 +++---- man/splineBasis2D.Rd | 60 +++---- man/splineFunction1D.Rd | 25 +-- man/splineFunction2D.Rd | 32 ++-- man/stratSample.Rd |only man/ttv.Rd | 24 +-- man/ttvCalculation.Rd | 2 man/umpcaBasis.Rd | 48 +++--- man/univDecomp.Rd | 6 man/univExpansion.Rd | 38 ++--- src/MFPCA-init.c |only src/MFPCA-win.def |only src/MFPCA.h |only src/dct2D.c | 10 - src/dct3D.c | 10 - tests/testthat/test_MFPCA_calculation.R | 90 +++++++++++ tests/testthat/test_bootstrap.R |only tests/testthat/test_fftw.R | 8 + tests/testthat/test_univDecomp.R | 50 ++++++ tests/testthat/test_univExpansion.R | 37 +++- 51 files changed, 1064 insertions(+), 708 deletions(-)
Title: Interpolation Methods
Description: Bivariate data interpolation on regular and irregular
grids, either linear or using splines are the main part of this
package. It is intended to provide FOSS replacement functions for
the ACM licensed akima::interp and tripack::tri.mesh functions.
Currently the piecewise linear interpolation part of akima::interp
(and also akima::interpp) is implemented in interp::interp, this
corresponds to the call akima::interp(..., linear=TRUE) which is the
default setting and covers most of akima::interp use cases in
depending packages. A re-implementation of Akimas spline
interpolation (akima::interp(..., linear=FALSE)) is currently under
development and will complete this package in a later
version. Estimators for partial derivatives are already available,
these are a prerequisite for the spline interpolation. The basic
part is currently a GPLed triangulation algorithm (sweep hull
algorithm by David Sinclair) providing the starting point for the
piecewise linear interpolator. As side effect this algorithm is also
used to provide replacements for the basic functions of the tripack
package which also suffer from the ACM restrictions. All functions
are designed to be backward compatible with their akima / tripack
counterparts.
Author: Albrecht Gebhardt [aut, cre, cph] (...),
Roger Bivand [aut],
David Sinclair [aut, cph]
Maintainer: Albrecht Gebhardt <albrecht.gebhardt@aau.at>
Diff between interp versions 1.0-27 dated 2017-06-16 and 1.0-29 dated 2017-06-17
ChangeLog | 31 +++++++++++++++++++++++++++++++ DESCRIPTION | 30 ++++++++++++++++++++++++------ MD5 | 8 ++++---- src/partDeriv.cpp | 33 ++++++++++++++++++++------------- src/shullDeltri.cpp | 36 ++++++++++++++++++------------------ 5 files changed, 97 insertions(+), 41 deletions(-)
Title: Fitting Frailty Models with the EM Algorithm
Description: Contains functions for fitting shared frailty models with a semi-parametric
baseline hazard with the Expectation-Maximization algorithm. Supported data formats
include clustered failures with left truncation and recurrent events in gap-time
or Andersen-Gill format. Several frailty distributions, such as the the gamma, positive stable
and the Power Variance Family are supported.
Author: Theodor Adrian Balan, Hein Putter
Maintainer: Theodor Adrian Balan <t.a.balan@lumc.nl>
Diff between frailtyEM versions 0.6.2 dated 2017-05-01 and 0.7.0-1 dated 2017-06-17
frailtyEM-0.6.2/frailtyEM/R/ggplot_emfrail.R |only frailtyEM-0.6.2/frailtyEM/R/plot_emfrail.R |only frailtyEM-0.6.2/frailtyEM/man/emfrail_distribution.Rd |only frailtyEM-0.6.2/frailtyEM/man/ggplot_emfrail.Rd |only frailtyEM-0.6.2/frailtyEM/man/plot_emfrail.Rd |only frailtyEM-0.7.0-1/frailtyEM/DESCRIPTION | 15 frailtyEM-0.7.0-1/frailtyEM/MD5 | 66 - frailtyEM-0.7.0-1/frailtyEM/NAMESPACE | 20 frailtyEM-0.7.0-1/frailtyEM/NEWS.md | 38 + frailtyEM-0.7.0-1/frailtyEM/R/RcppExports.R | 4 frailtyEM-0.7.0-1/frailtyEM/R/autoplot.emfrail.R |only frailtyEM-0.7.0-1/frailtyEM/R/em_fit.R | 81 +- frailtyEM-0.7.0-1/frailtyEM/R/emfrail.R | 380 ++++++---- frailtyEM-0.7.0-1/frailtyEM/R/emfrail_arguments.R | 18 frailtyEM-0.7.0-1/frailtyEM/R/emfrail_aux.R | 51 - frailtyEM-0.7.0-1/frailtyEM/R/emfrail_methods.R |only frailtyEM-0.7.0-1/frailtyEM/R/plot.emfrail.R |only frailtyEM-0.7.0-1/frailtyEM/R/predict.emfrail.R | 390 +++++----- frailtyEM-0.7.0-1/frailtyEM/R/print.emfrail.R | 34 frailtyEM-0.7.0-1/frailtyEM/R/print.emfrail_summary.R | 69 - frailtyEM-0.7.0-1/frailtyEM/R/summary.emfrail.R | 206 ++--- frailtyEM-0.7.0-1/frailtyEM/inst/doc/frailtyEM_manual.R | 176 ++-- frailtyEM-0.7.0-1/frailtyEM/inst/doc/frailtyEM_manual.Rnw | 469 +++++++------ frailtyEM-0.7.0-1/frailtyEM/inst/doc/frailtyEM_manual.pdf |binary frailtyEM-0.7.0-1/frailtyEM/man/autoplot.emfrail.Rd |only frailtyEM-0.7.0-1/frailtyEM/man/emfrail.Rd | 123 ++- frailtyEM-0.7.0-1/frailtyEM/man/emfrail_control.Rd | 8 frailtyEM-0.7.0-1/frailtyEM/man/emfrail_dist.Rd |only frailtyEM-0.7.0-1/frailtyEM/man/emfrail_pll.Rd | 19 frailtyEM-0.7.0-1/frailtyEM/man/laplace_transform.Rd | 4 frailtyEM-0.7.0-1/frailtyEM/man/logLik.emfrail.Rd |only frailtyEM-0.7.0-1/frailtyEM/man/plot.emfrail.Rd |only frailtyEM-0.7.0-1/frailtyEM/man/predict.emfrail.Rd | 133 +-- frailtyEM-0.7.0-1/frailtyEM/man/residuals.emfrail.Rd |only frailtyEM-0.7.0-1/frailtyEM/man/summary.emfrail.Rd | 7 frailtyEM-0.7.0-1/frailtyEM/src/RcppExports.cpp | 12 frailtyEM-0.7.0-1/frailtyEM/src/frailtyEM.c | 2 frailtyEM-0.7.0-1/frailtyEM/src/inf_mat_match.cpp | 2 frailtyEM-0.7.0-1/frailtyEM/src/sumxxt.cpp |only frailtyEM-0.7.0-1/frailtyEM/vignettes/frailtyEM_manual.Rnw | 469 +++++++------ frailtyEM-0.7.0-1/frailtyEM/vignettes/mybib.bib | 53 + 41 files changed, 1580 insertions(+), 1269 deletions(-)
Title: A Simple S3 Class for Representing Vectors of Binary Data
('BLOBS')
Description: R's raw vector is useful for storing a single binary object.
What if you want to put a vector of them in a data frame? The blob
package provides the blob object, a list of raw vectors, suitable for
use as a column in data frame.
Author: Hadley Wickham [aut],
Kirill Müller [cre],
RStudio [cph]
Maintainer: Kirill Müller <krlmlr+r@mailbox.org>
Diff between blob versions 1.0.0 dated 2016-12-28 and 1.1.0 dated 2017-06-17
DESCRIPTION | 16 +++++++++------- MD5 | 14 ++++++++------ NAMESPACE | 2 ++ NEWS.md |only R/blob.R | 8 ++++++++ R/format.R | 7 ++++--- README.md | 4 ++-- man/blob.Rd | 3 +-- tests/testthat/test-format.R |only 9 files changed, 34 insertions(+), 20 deletions(-)
Title: Create 'Table 1' to Describe Baseline Characteristics
Description: Creates 'Table 1', i.e., description of baseline patient
characteristics, which is essential in every medical research.
Supports both continuous and categorical variables, as well as
p-values and standardized mean differences. Weighted data are
supported via the 'survey' package. See 'github' for a screen cast.
'tableone' was inspired by descriptive statistics functions in
'Deducer' , a Java-based GUI package by Ian Fellows. This package
does not require GUI or Java, and intended for command-line users.
Author: Kazuki Yoshida, Justin Bohn.
Maintainer: Kazuki Yoshida <kazukiyoshida@mail.harvard.edu>
Diff between tableone versions 0.7.3 dated 2015-11-11 and 0.8.1 dated 2017-06-17
DESCRIPTION | 24 MD5 | 101 +-- NAMESPACE | 3 NEWS | 68 ++ R/CreateCatTable.R | 7 R/CreateContTable.R | 6 R/CreateTableOne.R | 9 R/ShowRegTable.R | 39 + R/modules-ShowRegTable.R |only R/modules-constructors.R | 10 R/modules-print.R | 51 + R/modules-smd.R | 20 R/modules-svy.R | 2 R/print.CatTable.R | 13 R/print.ContTable.R | 12 R/print.TableOne.R | 18 R/print.svyCatTable.R | 13 R/print.svyContTable.R | 13 R/svyCreateCatTable.R | 7 R/svyCreateContTable.R | 6 R/svyCreateTableOne.R | 13 R/tableone-package.R | 4 build/vignette.rds |binary inst/doc/introduction.Rmd | 2 inst/doc/introduction.html | 494 ++++++------------- inst/doc/smd.Rmd | 4 inst/doc/smd.html | 830 ++++++++++++-------------------- man/CreateCatTable.Rd | 7 man/CreateContTable.Rd | 7 man/CreateTableOne.Rd | 9 man/ExtractSmd.Rd | 7 man/ShowRegTable.Rd | 1 man/print.CatTable.Rd | 9 man/print.ContTable.Rd | 9 man/print.TableOne.Rd | 17 man/print.svyCatTable.Rd | 9 man/print.svyContTable.Rd | 9 man/summary.CatTable.Rd | 7 man/summary.ContTable.Rd | 7 man/summary.TableOne.Rd | 7 man/summary.svyCatTable.Rd | 7 man/summary.svyContTable.Rd | 7 man/svyCreateCatTable.Rd | 7 man/svyCreateContTable.Rd | 7 man/svyCreateTableOne.Rd | 9 man/tableone-package.Rd | 9 tests/testthat/test-CreateTableOne.R | 54 ++ tests/testthat/test-ShowRegTable.R | 177 ++++++ tests/testthat/test-modules-smd.R | 50 - tests/testthat/test-svyCreateTableOne.R | 82 +++ vignettes/introduction.Rmd | 2 vignettes/smd.Rmd | 4 52 files changed, 1227 insertions(+), 1062 deletions(-)
Title: Tools for Nonlinear Mixed-Effect Model Building and Diagnostics
Description: A collection of functions to be used as a model
building aid for nonlinear mixed-effects (population) analysis
using NONMEM. It facilitates data set checkout, exploration and
visualization, model diagnostics, candidate covariate identification
and model comparison.
Author: Andrew C. Hooker [aut, cre, cph],
Mats O. Karlsson [aut, cph],
Justin J. Wilkins [aut],
E. Niclas Jonsson [aut, trl, cph],
Ron Keizer [ctb] (functionality for bootstrap of GAM and SCM)
Maintainer: Andrew C. Hooker <andrew.hooker@farmbio.uu.se>
Diff between xpose4 versions 4.5.3 dated 2014-11-24 and 4.6.0 dated 2017-06-17
xpose4-4.5.3/xpose4/man/Data.Rd |only xpose4-4.5.3/xpose4/man/absval.delta.vs.cov.model.comp.Rd |only xpose4-4.5.3/xpose4/man/absval.iwres.wres.vs.ipred.pred.Rd |only xpose4-4.5.3/xpose4/man/add.functions.Rd |only xpose4-4.5.3/xpose4/man/change.graphical.parameters.Rd |only xpose4-4.5.3/xpose4/man/change.misc.parameters.Rd |only xpose4-4.5.3/xpose4/man/cwres.wres.vs.idv.Rd |only xpose4-4.5.3/xpose4/man/dist.hist.Rd |only xpose4-4.5.3/xpose4/man/dist.qq.Rd |only xpose4-4.5.3/xpose4/man/dv.preds.vs.idv.rd |only xpose4-4.5.3/xpose4/man/functions-classic.Rd |only xpose4-4.5.3/xpose4/man/functions-data.Rd |only xpose4-4.5.3/xpose4/man/functions-generic.Rd |only xpose4-4.5.3/xpose4/man/internal.functions.Rd |only xpose4-4.5.3/xpose4/man/read.nm.output.Rd |only xpose4-4.5.3/xpose4/man/reset.Rd |only xpose4-4.5.3/xpose4/man/splom.Rd |only xpose4-4.5.3/xpose4/man/summary.Rd |only xpose4-4.5.3/xpose4/man/tables.Rd |only xpose4-4.5.3/xpose4/man/xp.gam.Rd |only xpose4-4.5.3/xpose4/man/xpose4classic-internal.Rd |only xpose4-4.5.3/xpose4/man/xpose4classic-package.Rd |only xpose4-4.5.3/xpose4/man/xpose4data-internal.Rd |only xpose4-4.5.3/xpose4/man/xpose4data-package.Rd |only xpose4-4.5.3/xpose4/man/xpose4generic-package.Rd |only xpose4-4.5.3/xpose4/man/xpose4psn-package.Rd |only xpose4-4.5.3/xpose4/man/xpose4specific-internal.Rd |only xpose4-4.5.3/xpose4/man/xpose4specific-package.Rd |only xpose4-4.6.0/xpose4/DESCRIPTION | 29 xpose4-4.6.0/xpose4/MD5 | 747 +++---- xpose4-4.6.0/xpose4/NAMESPACE | 263 ++ xpose4-4.6.0/xpose4/NEWS | 40 xpose4-4.6.0/xpose4/R/Data.R | 103 - xpose4-4.6.0/xpose4/R/PI.helper.R | 46 xpose4-4.6.0/xpose4/R/SData.R | 28 xpose4-4.6.0/xpose4/R/absval.cwres.vs.cov.bw.R | 82 xpose4-4.6.0/xpose4/R/absval.cwres.vs.pred.R | 59 xpose4-4.6.0/xpose4/R/absval.cwres.vs.pred.by.cov.R | 56 xpose4-4.6.0/xpose4/R/absval.dcwres.vs.cov.model.comp.R | 83 xpose4-4.6.0/xpose4/R/absval.dipred.vs.cov.model.comp.R | 27 xpose4-4.6.0/xpose4/R/absval.diwres.vs.cov.model.comp.R | 4 xpose4-4.6.0/xpose4/R/absval.dpred.vs.cov.model.comp.R | 3 xpose4-4.6.0/xpose4/R/absval.dwres.vs.cov.model.comp.R | 4 xpose4-4.6.0/xpose4/R/absval.iwres.cwres.vs.ipred.pred.R | 68 xpose4-4.6.0/xpose4/R/absval.iwres.vs.cov.bw.R | 38 xpose4-4.6.0/xpose4/R/absval.iwres.vs.idv.R | 38 xpose4-4.6.0/xpose4/R/absval.iwres.vs.ipred.R | 57 xpose4-4.6.0/xpose4/R/absval.iwres.vs.ipred.by.cov.R | 60 xpose4-4.6.0/xpose4/R/absval.iwres.vs.pred.R | 58 xpose4-4.6.0/xpose4/R/absval.iwres.wres.vs.ipred.pred.R | 30 xpose4-4.6.0/xpose4/R/absval.wres.vs.cov.bw.R | 58 xpose4-4.6.0/xpose4/R/absval.wres.vs.idv.R | 66 xpose4-4.6.0/xpose4/R/absval.wres.vs.pred.R | 56 xpose4-4.6.0/xpose4/R/absval.wres.vs.pred.by.cov.R | 62 xpose4-4.6.0/xpose4/R/add.absval.R | 80 xpose4-4.6.0/xpose4/R/add.dichot.R | 25 xpose4-4.6.0/xpose4/R/add.exp.R | 24 xpose4-4.6.0/xpose4/R/add.grid.table.R | 41 xpose4-4.6.0/xpose4/R/add.log.R | 3 xpose4-4.6.0/xpose4/R/add.model.comp.R | 57 xpose4-4.6.0/xpose4/R/add.tad.R | 4 xpose4-4.6.0/xpose4/R/addid.R | 38 xpose4-4.6.0/xpose4/R/addit.gof.R | 71 xpose4-4.6.0/xpose4/R/all_classes.R |only xpose4-4.6.0/xpose4/R/autocorr.cwres.R | 63 xpose4-4.6.0/xpose4/R/autocorr.iwres.R | 35 xpose4-4.6.0/xpose4/R/autocorr.wres.R | 62 xpose4-4.6.0/xpose4/R/basic.gof.R | 74 xpose4-4.6.0/xpose4/R/basic.model.comp.R | 55 xpose4-4.6.0/xpose4/R/boot.hist.R | 444 ++-- xpose4-4.6.0/xpose4/R/bootgam.R | 107 - xpose4-4.6.0/xpose4/R/bootgam.menu.R | 37 xpose4-4.6.0/xpose4/R/bootgam.plots.R | 877 +++++++- xpose4-4.6.0/xpose4/R/bootscm.R | 719 +++---- xpose4-4.6.0/xpose4/R/calc.npar.R | 42 xpose4-4.6.0/xpose4/R/cat.dv.vs.idv.sb.R | 65 xpose4-4.6.0/xpose4/R/cat.pc.R | 61 xpose4-4.6.0/xpose4/R/categorical.table.R | 35 xpose4-4.6.0/xpose4/R/change.ab.graph.par.R | 72 xpose4-4.6.0/xpose4/R/change.bw.graph.par.R | 28 xpose4-4.6.0/xpose4/R/change.cat.cont.R | 107 - xpose4-4.6.0/xpose4/R/change.cat.levels.R | 33 xpose4-4.6.0/xpose4/R/change.cond.graph.par.R | 27 xpose4-4.6.0/xpose4/R/change.dil.graph.par.R | 27 xpose4-4.6.0/xpose4/R/change.dispersion.R | 77 xpose4-4.6.0/xpose4/R/change.dv.cat.levels.R | 30 xpose4-4.6.0/xpose4/R/change.label.par.R | 26 xpose4-4.6.0/xpose4/R/change.lm.graph.par.R | 27 xpose4-4.6.0/xpose4/R/change.medianNorm.R | 54 xpose4-4.6.0/xpose4/R/change.misc.graph.par.R | 27 xpose4-4.6.0/xpose4/R/change.miss.R | 27 xpose4-4.6.0/xpose4/R/change.parm.R | 15 xpose4-4.6.0/xpose4/R/change.pi.graph.par.R | 26 xpose4-4.6.0/xpose4/R/change.smooth.graph.par.R | 26 xpose4-4.6.0/xpose4/R/change.subset.R | 54 xpose4-4.6.0/xpose4/R/change.var.name.R | 30 xpose4-4.6.0/xpose4/R/change.xlabel.R | 32 xpose4-4.6.0/xpose4/R/change.xvardef.R | 62 xpose4-4.6.0/xpose4/R/check.gamobj.R | 78 xpose4-4.6.0/xpose4/R/check.vars.R | 38 xpose4-4.6.0/xpose4/R/compute.cwres.R | 444 ++++ xpose4-4.6.0/xpose4/R/computePI.R | 19 xpose4-4.6.0/xpose4/R/continuous.table.R | 26 xpose4-4.6.0/xpose4/R/cov.hist.R | 76 xpose4-4.6.0/xpose4/R/cov.qq.R | 81 xpose4-4.6.0/xpose4/R/cov.splom.R | 26 xpose4-4.6.0/xpose4/R/cov.summary.R | 74 xpose4-4.6.0/xpose4/R/create.mirror.R | 49 xpose4-4.6.0/xpose4/R/create.parameter.list.R | 255 +- xpose4-4.6.0/xpose4/R/create.rand.R | 24 xpose4-4.6.0/xpose4/R/create.strat.rand.R | 2 xpose4-4.6.0/xpose4/R/create.xpose.plot.classes.R | 29 xpose4-4.6.0/xpose4/R/createXposeClasses.R | 511 ++--- xpose4-4.6.0/xpose4/R/cwres.dist.hist.R | 28 xpose4-4.6.0/xpose4/R/cwres.dist.qq.R | 40 xpose4-4.6.0/xpose4/R/cwres.vs.cov.R | 170 + xpose4-4.6.0/xpose4/R/cwres.vs.idv.R | 49 xpose4-4.6.0/xpose4/R/cwres.vs.idv.bw.R | 43 xpose4-4.6.0/xpose4/R/cwres.vs.pred.R | 44 xpose4-4.6.0/xpose4/R/cwres.vs.pred.bw.R | 67 xpose4-4.6.0/xpose4/R/cwres.wres.vs.idv.R | 65 xpose4-4.6.0/xpose4/R/cwres.wres.vs.pred.R | 29 xpose4-4.6.0/xpose4/R/dOFV.vs.cov.R | 35 xpose4-4.6.0/xpose4/R/dOFV.vs.id.R | 48 xpose4-4.6.0/xpose4/R/dOFV1.vs.dOFV2.R | 37 xpose4-4.6.0/xpose4/R/data.checkout.R | 72 xpose4-4.6.0/xpose4/R/db.names.R | 64 xpose4-4.6.0/xpose4/R/dv.preds.vs.idv.R | 63 xpose4-4.6.0/xpose4/R/dv.vs.idv.R | 52 xpose4-4.6.0/xpose4/R/dv.vs.ipred.R | 37 xpose4-4.6.0/xpose4/R/dv.vs.ipred.by.cov.R | 42 xpose4-4.6.0/xpose4/R/dv.vs.ipred.by.idv.R | 36 xpose4-4.6.0/xpose4/R/dv.vs.pred.R | 40 xpose4-4.6.0/xpose4/R/dv.vs.pred.by.cov.R | 41 xpose4-4.6.0/xpose4/R/dv.vs.pred.by.idv.R | 35 xpose4-4.6.0/xpose4/R/dv.vs.pred.ipred.R | 45 xpose4-4.6.0/xpose4/R/eq.xpose.R | 2 xpose4-4.6.0/xpose4/R/export.graph.par.R | 64 xpose4-4.6.0/xpose4/R/export.variable.definitions.R | 48 xpose4-4.6.0/xpose4/R/fix.wrapped.lines.R | 23 xpose4-4.6.0/xpose4/R/get.doc.R | 26 xpose4-4.6.0/xpose4/R/get.refrunno.R | 2 xpose4-4.6.0/xpose4/R/gof.R | 136 + xpose4-4.6.0/xpose4/R/gofSetup.R | 2 xpose4-4.6.0/xpose4/R/import.graph.par.R | 64 xpose4-4.6.0/xpose4/R/import.variable.definitions.R | 57 xpose4-4.6.0/xpose4/R/ind.plots.R | 104 + xpose4-4.6.0/xpose4/R/ind.plots.cwres.hist.R | 5 xpose4-4.6.0/xpose4/R/ind.plots.cwres.qq.R | 5 xpose4-4.6.0/xpose4/R/ind.plots.wres.hist.R | 95 xpose4-4.6.0/xpose4/R/ind.plots.wres.qq.R | 98 xpose4-4.6.0/xpose4/R/ipred.vs.idv.R | 44 xpose4-4.6.0/xpose4/R/is.readable.file.R | 2 xpose4-4.6.0/xpose4/R/iwres.dist.hist.R | 25 xpose4-4.6.0/xpose4/R/iwres.dist.qq.R | 23 xpose4-4.6.0/xpose4/R/iwres.vs.idv.R | 39 xpose4-4.6.0/xpose4/R/kaplan.plot.R | 147 + xpose4-4.6.0/xpose4/R/make.sb.data.R | 18 xpose4-4.6.0/xpose4/R/npc.coverage.R | 95 xpose4-4.6.0/xpose4/R/nsim.R | 26 xpose4-4.6.0/xpose4/R/parm.hist.R | 26 xpose4-4.6.0/xpose4/R/parm.qq.R | 36 xpose4-4.6.0/xpose4/R/parm.splom.R | 164 - xpose4-4.6.0/xpose4/R/parm.summary.R | 29 xpose4-4.6.0/xpose4/R/parm.vs.cov.R | 53 xpose4-4.6.0/xpose4/R/parm.vs.parm.R | 47 xpose4-4.6.0/xpose4/R/prazosin_xpdb.R |only xpose4-4.6.0/xpose4/R/pred.vs.idv.R | 45 xpose4-4.6.0/xpose4/R/print.xpose.multiple.plot.R | 99 xpose4-4.6.0/xpose4/R/randtest.hist.R | 71 xpose4-4.6.0/xpose4/R/ranpar.hist.R | 26 xpose4-4.6.0/xpose4/R/ranpar.qq.R | 28 xpose4-4.6.0/xpose4/R/ranpar.splom.R | 26 xpose4-4.6.0/xpose4/R/ranpar.vs.cov.R | 53 xpose4-4.6.0/xpose4/R/read.TTE.sim.data.R | 31 xpose4-4.6.0/xpose4/R/read.lst.R | 2 xpose4-4.6.0/xpose4/R/read.lst6.R | 24 xpose4-4.6.0/xpose4/R/read.lst7.R | 23 xpose4-4.6.0/xpose4/R/read.nm.tables.R | 226 +- xpose4-4.6.0/xpose4/R/read.npc.vpc.results.R | 36 xpose4-4.6.0/xpose4/R/read.phi.R | 24 xpose4-4.6.0/xpose4/R/read.vpctab.R | 35 xpose4-4.6.0/xpose4/R/read_nm_table.R |only xpose4-4.6.0/xpose4/R/reset.graph.par.R | 59 xpose4-4.6.0/xpose4/R/runsum.R | 70 xpose4-4.6.0/xpose4/R/set.doc.R | 66 xpose4-4.6.0/xpose4/R/simprazExample.R | 29 xpose4-4.6.0/xpose4/R/tabulate.parameters.R | 36 xpose4-4.6.0/xpose4/R/test.xpose.data.R | 2 xpose4-4.6.0/xpose4/R/wres.dist.hist.R | 27 xpose4-4.6.0/xpose4/R/wres.dist.qq.R | 26 xpose4-4.6.0/xpose4/R/wres.vs.cov.R | 62 xpose4-4.6.0/xpose4/R/wres.vs.idv.R | 42 xpose4-4.6.0/xpose4/R/wres.vs.idv.bw.R | 36 xpose4-4.6.0/xpose4/R/wres.vs.pred.R | 38 xpose4-4.6.0/xpose4/R/wres.vs.pred.bw.R | 37 xpose4-4.6.0/xpose4/R/xlabel.R | 59 xpose4-4.6.0/xpose4/R/xp.akaike.plot.R | 65 xpose4-4.6.0/xpose4/R/xp.cook.R | 71 xpose4-4.6.0/xpose4/R/xp.gam.R | 42 xpose4-4.6.0/xpose4/R/xp.get.disp.R | 89 xpose4-4.6.0/xpose4/R/xp.ind.inf.fit.R | 140 - xpose4-4.6.0/xpose4/R/xp.ind.inf.terms.R | 101 - xpose4-4.6.0/xpose4/R/xp.ind.stud.res.R | 33 xpose4-4.6.0/xpose4/R/xp.plot.R | 30 xpose4-4.6.0/xpose4/R/xp.scope3.R | 175 - xpose4-4.6.0/xpose4/R/xp.summary.R | 25 xpose4-4.6.0/xpose4/R/xpose.VPC.R | 274 ++ xpose4-4.6.0/xpose4/R/xpose.VPC.both.R | 57 xpose4-4.6.0/xpose4/R/xpose.VPC.categorical.R | 81 xpose4-4.6.0/xpose4/R/xpose.ask.for.filename.R | 18 xpose4-4.6.0/xpose4/R/xpose.bin.R | 2 xpose4-4.6.0/xpose4/R/xpose.calculate.cwres.R | 31 xpose4-4.6.0/xpose4/R/xpose.create.title.R | 44 xpose4-4.6.0/xpose4/R/xpose.data.R | 198 + xpose4-4.6.0/xpose4/R/xpose.dev.new.R | 34 xpose4-4.6.0/xpose4/R/xpose.gam.R | 94 xpose4-4.6.0/xpose4/R/xpose.license.citation.R | 15 xpose4-4.6.0/xpose4/R/xpose.log.axes.R | 38 xpose4-4.6.0/xpose4/R/xpose.multiple.plot.R | 33 xpose4-4.6.0/xpose4/R/xpose.multiple.plot.default.R | 59 xpose4-4.6.0/xpose4/R/xpose.panel.bw.R | 102 + xpose4-4.6.0/xpose4/R/xpose.panel.default.R | 433 ++++ xpose4-4.6.0/xpose4/R/xpose.panel.histogram.R | 77 xpose4-4.6.0/xpose4/R/xpose.panel.qq.R | 26 xpose4-4.6.0/xpose4/R/xpose.panel.splom.R | 65 xpose4-4.6.0/xpose4/R/xpose.plot.bw.R | 99 xpose4-4.6.0/xpose4/R/xpose.plot.default.R | 225 +- xpose4-4.6.0/xpose4/R/xpose.plot.histogram.R | 95 xpose4-4.6.0/xpose4/R/xpose.plot.qq.R | 82 xpose4-4.6.0/xpose4/R/xpose.plot.splom.R | 115 + xpose4-4.6.0/xpose4/R/xpose.print.R | 36 xpose4-4.6.0/xpose4/R/xpose.read.R | 76 xpose4-4.6.0/xpose4/R/xpose.stack.R | 3 xpose4-4.6.0/xpose4/R/xpose.string.print.R | 13 xpose4-4.6.0/xpose4/R/xpose.write.R | 28 xpose4-4.6.0/xpose4/R/xpose4-package.R |only xpose4-4.6.0/xpose4/R/xpose4.R | 40 xpose4-4.6.0/xpose4/R/xsubset.R | 48 xpose4-4.6.0/xpose4/R/xvardef.R | 39 xpose4-4.6.0/xpose4/R/zzz.R | 7 xpose4-4.6.0/xpose4/README.md | 39 xpose4-4.6.0/xpose4/data/simpraz.xpdb.RData |binary xpose4-4.6.0/xpose4/inst/CITATION | 2 xpose4-4.6.0/xpose4/inst/xpose.ini | 14 xpose4-4.6.0/xpose4/man/GAM_summary_and_plot.Rd |only xpose4-4.6.0/xpose4/man/absval.cwres.vs.cov.bw.Rd | 176 - xpose4-4.6.0/xpose4/man/absval.cwres.vs.pred.Rd | 156 - xpose4-4.6.0/xpose4/man/absval.cwres.vs.pred.by.cov.Rd | 196 + xpose4-4.6.0/xpose4/man/absval.iwres.cwres.vs.ipred.pred.Rd |only xpose4-4.6.0/xpose4/man/absval.iwres.vs.cov.bw.Rd |only xpose4-4.6.0/xpose4/man/absval.iwres.vs.idv.Rd |only xpose4-4.6.0/xpose4/man/absval.iwres.vs.ipred.Rd | 158 - xpose4-4.6.0/xpose4/man/absval.iwres.vs.ipred.by.cov.Rd | 174 + xpose4-4.6.0/xpose4/man/absval.iwres.vs.pred.Rd | 163 - xpose4-4.6.0/xpose4/man/absval.wres.vs.cov.bw.Rd | 154 - xpose4-4.6.0/xpose4/man/absval.wres.vs.idv.Rd | 178 - xpose4-4.6.0/xpose4/man/absval.wres.vs.pred.Rd | 151 - xpose4-4.6.0/xpose4/man/absval.wres.vs.pred.by.cov.Rd | 181 + xpose4-4.6.0/xpose4/man/absval_delta_vs_cov_model_comp.Rd |only xpose4-4.6.0/xpose4/man/add.grid.table.Rd | 170 - xpose4-4.6.0/xpose4/man/add.model.comp.Rd | 129 - xpose4-4.6.0/xpose4/man/add_transformed_columns.Rd |only xpose4-4.6.0/xpose4/man/addid.Rd |only xpose4-4.6.0/xpose4/man/addit.gof.Rd | 196 + xpose4-4.6.0/xpose4/man/autocorr.cwres.Rd | 166 - xpose4-4.6.0/xpose4/man/autocorr.iwres.Rd |only xpose4-4.6.0/xpose4/man/autocorr.wres.Rd | 168 - xpose4-4.6.0/xpose4/man/basic.gof.Rd | 193 + xpose4-4.6.0/xpose4/man/basic.model.comp.Rd | 174 + xpose4-4.6.0/xpose4/man/boot.hist.Rd | 186 - xpose4-4.6.0/xpose4/man/bootgam.print.Rd | 56 xpose4-4.6.0/xpose4/man/bootscm.import.Rd | 128 - xpose4-4.6.0/xpose4/man/cat.dv.vs.idv.sb.Rd | 296 +- xpose4-4.6.0/xpose4/man/cat.pc.Rd | 193 - xpose4-4.6.0/xpose4/man/categorical.table.Rd |only xpose4-4.6.0/xpose4/man/change.parm.Rd | 56 xpose4-4.6.0/xpose4/man/change.var.name.Rd | 66 xpose4-4.6.0/xpose4/man/change.xlabel.Rd | 72 xpose4-4.6.0/xpose4/man/change.xvardef.Rd | 153 - xpose4-4.6.0/xpose4/man/change_graphical_parameters.Rd |only xpose4-4.6.0/xpose4/man/change_misc_parameters.Rd |only xpose4-4.6.0/xpose4/man/check.vars.Rd |only xpose4-4.6.0/xpose4/man/compute.cwres.Rd | 952 ++++----- xpose4-4.6.0/xpose4/man/create.mirror.Rd | 101 - xpose4-4.6.0/xpose4/man/create.xpose.plot.classes.Rd | 39 xpose4-4.6.0/xpose4/man/createXposeClasses.Rd | 52 xpose4-4.6.0/xpose4/man/cwres.dist.hist.Rd | 128 - xpose4-4.6.0/xpose4/man/cwres.dist.qq.Rd | 124 - xpose4-4.6.0/xpose4/man/cwres.vs.cov.Rd | 196 + xpose4-4.6.0/xpose4/man/cwres.vs.idv.Rd | 169 - xpose4-4.6.0/xpose4/man/cwres.vs.idv.bw.Rd | 156 - xpose4-4.6.0/xpose4/man/cwres.vs.pred.Rd | 158 - xpose4-4.6.0/xpose4/man/cwres.vs.pred.bw.Rd | 153 - xpose4-4.6.0/xpose4/man/cwres_wres_vs_x.Rd |only xpose4-4.6.0/xpose4/man/dOFV.vs.cov.Rd | 168 - xpose4-4.6.0/xpose4/man/dOFV.vs.id.Rd | 230 +- xpose4-4.6.0/xpose4/man/dOFV1.vs.dOFV2.Rd | 179 - xpose4-4.6.0/xpose4/man/data.checkout.Rd | 195 + xpose4-4.6.0/xpose4/man/data_extract_or_assign.Rd |only xpose4-4.6.0/xpose4/man/db.names.Rd | 90 xpose4-4.6.0/xpose4/man/dv.preds.vs.idv.Rd |only xpose4-4.6.0/xpose4/man/dv.vs.idv.Rd | 145 - xpose4-4.6.0/xpose4/man/dv.vs.ipred.Rd | 154 - xpose4-4.6.0/xpose4/man/dv.vs.ipred.by.cov.Rd | 176 - xpose4-4.6.0/xpose4/man/dv.vs.ipred.by.idv.Rd | 163 - xpose4-4.6.0/xpose4/man/dv.vs.pred.Rd | 154 - xpose4-4.6.0/xpose4/man/dv.vs.pred.by.cov.Rd | 176 - xpose4-4.6.0/xpose4/man/dv.vs.pred.by.idv.Rd | 164 - xpose4-4.6.0/xpose4/man/dv.vs.pred.ipred.Rd | 187 + xpose4-4.6.0/xpose4/man/export.graph.par.Rd | 97 xpose4-4.6.0/xpose4/man/export.variable.definitions.Rd | 98 xpose4-4.6.0/xpose4/man/find.right.table.Rd |only xpose4-4.6.0/xpose4/man/gof.Rd | 260 +- xpose4-4.6.0/xpose4/man/import.graph.par.Rd | 97 xpose4-4.6.0/xpose4/man/import.variable.definitions.Rd | 91 xpose4-4.6.0/xpose4/man/ind.plots.Rd | 322 +-- xpose4-4.6.0/xpose4/man/ind.plots.wres.hist.Rd | 294 +- xpose4-4.6.0/xpose4/man/ind.plots.wres.qq.Rd | 297 +- xpose4-4.6.0/xpose4/man/ipred.vs.idv.Rd | 143 - xpose4-4.6.0/xpose4/man/iwres.dist.hist.Rd | 130 - xpose4-4.6.0/xpose4/man/iwres.dist.qq.Rd | 133 - xpose4-4.6.0/xpose4/man/iwres.vs.idv.Rd | 157 - xpose4-4.6.0/xpose4/man/kaplan.plot.Rd | 453 ++-- xpose4-4.6.0/xpose4/man/make.sb.data.Rd | 88 xpose4-4.6.0/xpose4/man/npc.coverage.Rd | 228 -- xpose4-4.6.0/xpose4/man/nsim.Rd | 69 xpose4-4.6.0/xpose4/man/par_cov_hist.Rd |only xpose4-4.6.0/xpose4/man/par_cov_qq.Rd |only xpose4-4.6.0/xpose4/man/par_cov_splom.Rd |only xpose4-4.6.0/xpose4/man/par_cov_summary.Rd |only xpose4-4.6.0/xpose4/man/parm.vs.cov.Rd | 167 - xpose4-4.6.0/xpose4/man/parm.vs.parm.Rd | 157 - xpose4-4.6.0/xpose4/man/pred.vs.idv.Rd | 144 - xpose4-4.6.0/xpose4/man/print.xpose.multiple.plot.Rd | 52 xpose4-4.6.0/xpose4/man/randtest.hist.Rd | 128 - xpose4-4.6.0/xpose4/man/ranpar.vs.cov.Rd | 167 - xpose4-4.6.0/xpose4/man/read.TTE.sim.data.Rd | 84 xpose4-4.6.0/xpose4/man/read.nm.tables.Rd | 199 - xpose4-4.6.0/xpose4/man/read.npc.vpc.results.Rd | 109 - xpose4-4.6.0/xpose4/man/read.vpctab.Rd | 112 - xpose4-4.6.0/xpose4/man/read_NM_output.Rd |only xpose4-4.6.0/xpose4/man/read_nm_table.Rd |only xpose4-4.6.0/xpose4/man/reset.graph.par.Rd |only xpose4-4.6.0/xpose4/man/runsum.Rd | 265 +- xpose4-4.6.0/xpose4/man/simpraz.xpdb.Rd | 310 --- xpose4-4.6.0/xpose4/man/simprazExample.Rd | 88 xpose4-4.6.0/xpose4/man/tabulate.parameters.Rd | 94 xpose4-4.6.0/xpose4/man/wres.dist.hist.Rd | 126 - xpose4-4.6.0/xpose4/man/wres.dist.qq.Rd | 130 - xpose4-4.6.0/xpose4/man/wres.vs.cov.Rd | 130 - xpose4-4.6.0/xpose4/man/wres.vs.idv.Rd | 162 - xpose4-4.6.0/xpose4/man/wres.vs.idv.bw.Rd | 146 - xpose4-4.6.0/xpose4/man/wres.vs.pred.Rd | 156 - xpose4-4.6.0/xpose4/man/wres.vs.pred.bw.Rd | 149 - xpose4-4.6.0/xpose4/man/xlabel.Rd | 109 - xpose4-4.6.0/xpose4/man/xp.boot.par.est.Rd | 181 - xpose4-4.6.0/xpose4/man/xp.boot.par.est.corr.Rd | 112 - xpose4-4.6.0/xpose4/man/xp.daic.npar.plot.Rd |only xpose4-4.6.0/xpose4/man/xp.distr.mod.size.Rd | 88 xpose4-4.6.0/xpose4/man/xp.dofv.npar.plot.Rd |only xpose4-4.6.0/xpose4/man/xp.dofv.plot.Rd | 76 xpose4-4.6.0/xpose4/man/xp.get.disp.Rd |only xpose4-4.6.0/xpose4/man/xp.inc.cond.stab.cov.Rd |only xpose4-4.6.0/xpose4/man/xp.inc.ind.cond.stab.cov.Rd |only xpose4-4.6.0/xpose4/man/xp.inc.prob.Rd | 89 xpose4-4.6.0/xpose4/man/xp.inc.prob.comb.2.Rd | 84 xpose4-4.6.0/xpose4/man/xp.inc.stab.cov.Rd | 107 - xpose4-4.6.0/xpose4/man/xp.incl.index.cov.Rd | 112 - xpose4-4.6.0/xpose4/man/xp.incl.index.cov.comp.Rd | 86 xpose4-4.6.0/xpose4/man/xp.incl.index.cov.ind.Rd | 117 - xpose4-4.6.0/xpose4/man/xp.scope3.Rd |only xpose4-4.6.0/xpose4/man/xpose.VPC.Rd | 573 ++--- xpose4-4.6.0/xpose4/man/xpose.VPC.both.Rd | 196 + xpose4-4.6.0/xpose4/man/xpose.VPC.categorical.Rd | 291 +- xpose4-4.6.0/xpose4/man/xpose.ask.for.filename.Rd | 71 xpose4-4.6.0/xpose4/man/xpose.bootgam.Rd |only xpose4-4.6.0/xpose4/man/xpose.create.title.Rd | 116 - xpose4-4.6.0/xpose4/man/xpose.create.title.text.Rd | 69 xpose4-4.6.0/xpose4/man/xpose.data-class.Rd | 86 xpose4-4.6.0/xpose4/man/xpose.data.Rd | 286 +- xpose4-4.6.0/xpose4/man/xpose.dev.new.Rd | 47 xpose4-4.6.0/xpose4/man/xpose.gam.Rd | 244 +- xpose4-4.6.0/xpose4/man/xpose.license.citation.Rd | 41 xpose4-4.6.0/xpose4/man/xpose.multiple.plot-class.Rd |only xpose4-4.6.0/xpose4/man/xpose.multiple.plot.Rd | 128 - xpose4-4.6.0/xpose4/man/xpose.multiple.plot.default.Rd | 137 - xpose4-4.6.0/xpose4/man/xpose.panel.bw.Rd | 329 +-- xpose4-4.6.0/xpose4/man/xpose.panel.default.Rd | 1207 +++++------- xpose4-4.6.0/xpose4/man/xpose.panel.histogram.Rd | 301 +- xpose4-4.6.0/xpose4/man/xpose.panel.qq.Rd | 98 xpose4-4.6.0/xpose4/man/xpose.panel.splom.Rd | 215 -- xpose4-4.6.0/xpose4/man/xpose.plot.bw.Rd | 314 +-- xpose4-4.6.0/xpose4/man/xpose.plot.default.Rd | 521 ++--- xpose4-4.6.0/xpose4/man/xpose.plot.histogram.Rd | 281 +- xpose4-4.6.0/xpose4/man/xpose.plot.qq.Rd | 245 +- xpose4-4.6.0/xpose4/man/xpose.plot.splom.Rd | 317 +-- xpose4-4.6.0/xpose4/man/xpose.prefs-class.Rd | 162 - xpose4-4.6.0/xpose4/man/xpose.print.Rd |only xpose4-4.6.0/xpose4/man/xpose.string.print.Rd | 49 xpose4-4.6.0/xpose4/man/xpose.yscale.components.log10.Rd | 77 xpose4-4.6.0/xpose4/man/xpose4-package.Rd | 312 +-- xpose4-4.6.0/xpose4/man/xpose4.Rd |only xpose4-4.6.0/xpose4/man/xsubset.Rd | 97 xpose4-4.6.0/xpose4/man/xvardef.Rd | 99 xpose4-4.6.0/xpose4/tests |only 406 files changed, 21509 insertions(+), 16252 deletions(-)
Title: Maximum Likelihood Models for Species Abundance Distributions
Description: Maximum likelihood tools to fit and compare models of species
abundance distributions and of species rank-abundance distributions.
Author: Paulo I. Prado, Murilo Dantas Miranda and Andre Chalom
Maintainer: Paulo I. Prado <prado@ib.usp.br>
Diff between sads versions 0.3.2 dated 2017-06-12 and 0.4.0 dated 2017-06-17
DESCRIPTION | 8 +- MD5 | 28 +++++----- NEWS | 10 +++ R/fitgeom.R | 8 ++ R/plotprofmle.R | 12 ++-- R/qbs.R | 3 - R/sads-methods.R | 129 +++++++++++++++++++++++++++++------------------ README.md | 6 +- inst/doc/sads_intro.R | 63 ++++++++++++++-------- inst/doc/sads_intro.Rnw | 28 +++++++++- inst/doc/sads_intro.pdf |binary man/fitrad-class.Rd | 2 man/fitsad-class.Rd | 2 man/rad-class.Rd | 13 ++++ vignettes/sads_intro.Rnw | 28 +++++++++- 15 files changed, 238 insertions(+), 102 deletions(-)
Title: Large, Sparse Optimal Matching with Refined Covariate Balance
Description: Tools for large, sparse optimal matching of treated units
and control units in observational studies. Provisions are
made for refined covariate balance constraints, which include
fine and near-fine balance as special cases. Matches are
optimal in the sense that they are computed as solutions to
network optimization problems rather than greedy algorithms.
Author: Samuel D. Pimentel
Maintainer: Samuel D. Pimentel <spi@wharton.upenn.edu>
Diff between rcbalance versions 1.8.3 dated 2016-08-16 and 1.8.4 dated 2017-06-17
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- R/rcbalance.R | 2 +- 3 files changed, 7 insertions(+), 7 deletions(-)
Title: Extensible, Parallelizable Implementation of the Random Forest
Algorithm
Description: Scalable decision tree training and prediction.
Author: Mark Seligman
Maintainer: Mark Seligman <mseligman@suiji.org>
Diff between Rborist versions 0.1-6 dated 2017-05-09 and 0.1-7 dated 2017-06-17
Rborist-0.1-6/Rborist/src/rcppMonolith.cc |only Rborist-0.1-7/Rborist/DESCRIPTION | 8 Rborist-0.1-7/Rborist/MD5 | 61 ++-- Rborist-0.1-7/Rborist/NAMESPACE | 2 Rborist-0.1-7/Rborist/R/Rborist.default.R | 10 Rborist-0.1-7/Rborist/R/Streamline.R |only Rborist-0.1-7/Rborist/R/Streamline.default.R |only Rborist-0.1-7/Rborist/inst/doc/rborist.R | 10 Rborist-0.1-7/Rborist/inst/doc/rborist.Rmd | 23 + Rborist-0.1-7/Rborist/inst/doc/rborist.html | 18 + Rborist-0.1-7/Rborist/man/Rborist.Rd | 2 Rborist-0.1-7/Rborist/man/Streamline.Rd |only Rborist-0.1-7/Rborist/src/bottom.cc | 295 +++++++--------------- Rborist-0.1-7/Rborist/src/bottom.h | 299 ++++++++++++----------- Rborist-0.1-7/Rborist/src/param.h | 3 Rborist-0.1-7/Rborist/src/path.cc | 34 ++ Rborist-0.1-7/Rborist/src/path.h | 54 +--- Rborist-0.1-7/Rborist/src/rcppArmadilloSample.cc |only Rborist-0.1-7/Rborist/src/rcppExport.cc |only Rborist-0.1-7/Rborist/src/rcppForest.cc |only Rborist-0.1-7/Rborist/src/rcppInit.cc |only Rborist-0.1-7/Rborist/src/rcppLeaf.cc |only Rborist-0.1-7/Rborist/src/rcppPredblock.cc |only Rborist-0.1-7/Rborist/src/rcppPredict.cc |only Rborist-0.1-7/Rborist/src/rcppRowrank.cc |only Rborist-0.1-7/Rborist/src/rcppTrain.cc |only Rborist-0.1-7/Rborist/src/rowrank.cc | 6 Rborist-0.1-7/Rborist/src/rowrank.h | 23 + Rborist-0.1-7/Rborist/src/runset.cc | 2 Rborist-0.1-7/Rborist/src/runset.h | 2 Rborist-0.1-7/Rborist/src/sample.cc | 4 Rborist-0.1-7/Rborist/src/samplepred.cc | 111 ++------ Rborist-0.1-7/Rborist/src/samplepred.h | 45 ++- Rborist-0.1-7/Rborist/src/splitpred.cc | 240 +++++++++--------- Rborist-0.1-7/Rborist/src/splitpred.h | 27 +- Rborist-0.1-7/Rborist/src/train.cc | 8 Rborist-0.1-7/Rborist/src/train.h | 6 Rborist-0.1-7/Rborist/vignettes/rborist.Rmd | 23 + 38 files changed, 680 insertions(+), 636 deletions(-)
Title: Classes with Reference Semantics
Description: The R6 package allows the creation of classes with reference
semantics, similar to R's built-in reference classes. Compared to reference
classes, R6 classes are simpler and lighter-weight, and they are not built
on S4 classes so they do not require the methods package. These classes
allow public and private members, and they support inheritance, even when
the classes are defined in different packages.
Author: Winston Chang [aut, cre]
Maintainer: Winston Chang <winston@stdout.org>
Diff between R6 versions 2.2.1 dated 2017-05-10 and 2.2.2 dated 2017-06-17
DESCRIPTION | 6 - MD5 | 14 ++-- NEWS.md | 8 ++ R/clone.R | 34 ++++++---- R/new.R | 3 inst/doc/Introduction.html | 6 - inst/doc/Performance.html | 140 ++++++++++++++++++++++---------------------- tests/testthat/test-clone.R | 81 +++++++++++++++++++++++++ 8 files changed, 197 insertions(+), 95 deletions(-)
Title: Add Even More Interactivity to Interactive Charts
Description: Like package 'manipulate' does for static graphics, this package
helps to easily add controls like sliders, pickers, checkboxes, etc. that
can be used to modify the input data or the parameters of an interactive
chart created with package 'htmlwidgets'.
Author: Francois Guillem [aut, cre],
RTE [cph],
JJ Allaire [ctb],
Marion Praz [ctb] (New user interface)
Maintainer: Francois Guillem <francois.guillem@rte-france.com>
Diff between manipulateWidget versions 0.6.0 dated 2017-05-24 and 0.7.0 dated 2017-06-17
manipulateWidget-0.6.0/manipulateWidget/R/mwControlsUI.R |only manipulateWidget-0.6.0/manipulateWidget/man/mwControlsUI.Rd |only manipulateWidget-0.6.0/manipulateWidget/vignettes/kmeans.png |only manipulateWidget-0.7.0/manipulateWidget/DESCRIPTION | 16 manipulateWidget-0.7.0/manipulateWidget/MD5 | 61 +- manipulateWidget-0.7.0/manipulateWidget/NAMESPACE | 7 manipulateWidget-0.7.0/manipulateWidget/NEWS.md | 10 manipulateWidget-0.7.0/manipulateWidget/R/combineWidgets.R | 38 - manipulateWidget-0.7.0/manipulateWidget/R/compareOptions.R |only manipulateWidget-0.7.0/manipulateWidget/R/controlsUtils.R | 17 manipulateWidget-0.7.0/manipulateWidget/R/getRowAndCols.R |only manipulateWidget-0.7.0/manipulateWidget/R/manipulateWidget.R | 105 ++-- manipulateWidget-0.7.0/manipulateWidget/R/mwServer.R | 9 manipulateWidget-0.7.0/manipulateWidget/R/mwServer_helpers.R | 8 manipulateWidget-0.7.0/manipulateWidget/R/mwUI.R | 235 +++++----- manipulateWidget-0.7.0/manipulateWidget/R/mwUI_controls.R |only manipulateWidget-0.7.0/manipulateWidget/R/preprocessControls.R | 24 - manipulateWidget-0.7.0/manipulateWidget/R/zzz.R | 3 manipulateWidget-0.7.0/manipulateWidget/inst/doc/manipulateWidgets.R | 36 - manipulateWidget-0.7.0/manipulateWidget/inst/doc/manipulateWidgets.Rmd | 50 +- manipulateWidget-0.7.0/manipulateWidget/inst/doc/manipulateWidgets.html | 74 +-- manipulateWidget-0.7.0/manipulateWidget/inst/examples/manipulateWidget.Rmd | 24 + manipulateWidget-0.7.0/manipulateWidget/inst/manipulate_widget |only manipulateWidget-0.7.0/manipulateWidget/man/compareOptions.Rd |only manipulateWidget-0.7.0/manipulateWidget/man/manipulateWidget.Rd | 51 +- manipulateWidget-0.7.0/manipulateWidget/tests/testthat/test-mwServer.R | 10 manipulateWidget-0.7.0/manipulateWidget/tests/testthat/test-preprocessControls.R | 34 + manipulateWidget-0.7.0/manipulateWidget/vignettes/comparison.gif |binary manipulateWidget-0.7.0/manipulateWidget/vignettes/conditional-inputs.gif |binary manipulateWidget-0.7.0/manipulateWidget/vignettes/dynamic_inputs.gif |binary manipulateWidget-0.7.0/manipulateWidget/vignettes/example-kmeans.gif |binary manipulateWidget-0.7.0/manipulateWidget/vignettes/fancy-example.gif |binary manipulateWidget-0.7.0/manipulateWidget/vignettes/groups-inputs.gif |binary manipulateWidget-0.7.0/manipulateWidget/vignettes/manipulateWidgets.Rmd | 50 +- manipulateWidget-0.7.0/manipulateWidget/vignettes/update-widget.gif |binary 35 files changed, 461 insertions(+), 401 deletions(-)
More information about manipulateWidget at CRAN
Permanent link
Title: Hidden Markov Models
Description: Contains functions for the analysis of Discrete Time Hidden Markov Models, Markov Modulated GLMs and the Markov Modulated Poisson Process. It includes functions for simulation, parameter estimation, and the Viterbi algorithm. See the topic "HiddenMarkov" for an introduction to the package, and "Change Log" for a list of recent changes. The algorithms are based of those of Walter Zucchini.
Author: David Harte
Maintainer: David Harte <d.s.harte@gmail.com>
Diff between HiddenMarkov versions 1.8-7 dated 2016-08-30 and 1.8-8 dated 2017-06-17
DESCRIPTION | 8 ++++---- MD5 | 7 ++++--- NAMESPACE | 2 ++ man/Changes.Rd | 2 ++ src/HiddenMarkov_init.c |only 5 files changed, 12 insertions(+), 7 deletions(-)