Title: R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3)
Description: Protocol Buffers are a way of encoding structured data in an
efficient yet extensible format. Google uses Protocol Buffers for almost all
of its internal 'RPC' protocols and file formats. Additional documentation
is available in two included vignettes one of which corresponds to our paper
in the Journal of Statistical Software (2016, v71i02). Either version 2 or 3
of the 'Protocol Buffers' 'API' is supported.
Author: Romain Francois, Dirk Eddelbuettel, Murray Stokely and Jeroen Ooms
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RProtoBuf versions 0.4.9 dated 2017-03-06 and 0.4.10 dated 2017-08-13
ChangeLog | 17 ++++++++++++++++- DESCRIPTION | 8 ++++---- MD5 | 30 +++++++++++++++--------------- R/00classes.R | 6 +++--- R/rexp_obj.R | 6 +++++- build/vignette.rds |binary configure | 18 +++++++++--------- configure.ac | 2 +- inst/NEWS.Rd | 11 ++++++++++- inst/doc/RProtoBuf-intro.pdf |binary inst/doc/RProtoBuf-paper.pdf |binary inst/doc/RProtoBuf-quickref.pdf |binary inst/doc/RProtoBuf-unitTests.pdf |binary inst/unitTests/runit.import.R | 14 +++++++------- src/init.c | 4 ++-- vignettes/figures/fig-SER.pdf |binary 16 files changed, 72 insertions(+), 44 deletions(-)
Title: High-Dimensional Repeated Measures
Description: Methods for testing main and interaction effects in possibly
high-dimensional repeated measures in factorial designs. The observations
of the subjects are assumed to be multivariate normal.
It is possible to use up to 2 whole- and 3 subplot factors.
Author: Martin Happ [aut, cre], Harrar W. Solomon [aut], Arne C. Bathke [aut]
Maintainer: Martin Happ <martin.happ@aon.at>
Diff between HRM versions 0.6.9 dated 2017-08-04 and 0.7.1 dated 2017-08-13
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- NAMESPACE | 2 +- R/GUI.R | 3 --- R/utility.R | 2 ++ man/HRM.Rd | 4 ++-- 6 files changed, 14 insertions(+), 15 deletions(-)
Title: GRadient-Based RECognition of Spatial Patterns in Environmental
Data
Description: Provides algorithms for detection of spatial patterns from oceanographic data using image processing methods based on Gradient Recognition.
Author: Wencheng Lau-Medrano [aut, cre]
Maintainer: Wencheng Lau-Medrano <luis.laum@gmail.com>
Diff between grec versions 1.1.0 dated 2017-07-29 and 1.1.1 dated 2017-08-13
grec-1.1.0/grec/inst |only grec-1.1.0/grec/man/exampleSSTData.Rd |only grec-1.1.1/grec/DESCRIPTION | 14 +-- grec-1.1.1/grec/MD5 | 25 ++++--- grec-1.1.1/grec/NEWS.md | 6 + grec-1.1.1/grec/R/array-class.R | 21 +++-- grec-1.1.1/grec/R/grec-internal.R | 120 +++++++++++++++++++++------------- grec-1.1.1/grec/R/grec-main.R | 45 +++++++++--- grec-1.1.1/grec/data/bathy.RData |only grec-1.1.1/grec/data/chl.RData |only grec-1.1.1/grec/data/datalist |only grec-1.1.1/grec/data/sst.RData |only grec-1.1.1/grec/demo/detectFronts.R | 7 + grec-1.1.1/grec/man/bathy.Rd |only grec-1.1.1/grec/man/chl.Rd |only grec-1.1.1/grec/man/detectFronts.Rd | 8 +- grec-1.1.1/grec/man/grec-package.Rd | 2 grec-1.1.1/grec/man/sst.Rd |only 18 files changed, 163 insertions(+), 85 deletions(-)
Title: Calculating Marginal Effects and Levels with Errors
Description: Calculate predicted levels and marginal effects from 'glm' objects,
using the delta method to calculate standard errors. This is an R-based
version of the 'margins' command from Stata.
Author: Alex Gold [aut],
Nat Olin [ctb],
Annie Wang [aut, cre]
Maintainer: Annie Wang <anniejw6@gmail.com>
Diff between modmarg versions 0.5.0 dated 2017-06-05 and 0.6.0 dated 2017-08-13
DESCRIPTION | 10 +++--- MD5 | 23 +++++++------- NEWS.md | 4 ++ R/calc_jacob.R | 13 +++++--- R/marg.R | 66 ++++++++++++++++++++++++++++++++++------- R/pred_se.R | 16 ++++++++- README.md | 30 +++++++++++++----- inst/doc/delta-method.html | 4 +- inst/doc/usage.html | 4 +- man/marg.Rd | 26 +++++++++++++--- tests/testthat/test_jacobian.R | 3 + tests/testthat/test_overall.R | 3 + tests/testthat/test_weights.R |only 13 files changed, 150 insertions(+), 52 deletions(-)
Title: Heller-Heller-Gorfine Tests of Independence and Equality of
Distributions
Description: Heller-Heller-Gorfine ('HHG') tests are a set of powerful statistical
tests of multivariate k-sample homogeneity and independence. For the univariate
case, the package also offers implementations of the 'MinP DDP' and 'MinP ADP'
tests, which are consistent against all continuous alternatives but are
distribution-free, and are thus much faster to apply.
Author: Barak Brill & Shachar Kaufman, based in part on an earlier
implementation by Ruth Heller and Yair Heller.
Maintainer: Barak Brill <barakbri@mail.tau.ac.il>
Diff between HHG versions 2.0 dated 2016-10-26 and 2.1 dated 2017-08-13
DESCRIPTION | 8 MD5 | 25 - NAMESPACE | 2 R/HHG.R | 7 R/HHG_univariate.R | 4 build/vignette.rds |binary configure.ac | 52 +- inst/doc/HHG.R | 357 ++++++---------- inst/doc/HHG.Rmd | 394 +++++++---------- inst/doc/HHG.html | 1011 ++++++++++++++++++++-------------------------- man/hhg.test.Rd | 3 src/StatsComputer.cpp | 8 src/hhg_init.c |only vignettes/HHG_Spheres.PNG |binary 14 files changed, 828 insertions(+), 1043 deletions(-)
Title: Client for the Digital Public Library of America ('DPLA')
Description: Interact with the Digital Public Library of America
<https://dp.la> ('DPLA') 'REST' 'API'
<https://dp.la/info/developers/codex/> from R, including search
and more.
Author: Scott Chamberlain [aut, cre]
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>
Diff between rdpla versions 0.1.0 dated 2016-10-14 and 0.2.0 dated 2017-08-13
DESCRIPTION | 14 - LICENSE | 2 MD5 | 73 +++++----- NAMESPACE | 3 NEWS.md | 16 ++ R/caching.R |only R/collections.r | 18 +- R/dpla_bulk.R |only R/get_key.R | 16 +- R/items.r | 27 ++- R/on_load.R |only R/rdpla-package.R | 14 + R/zzz.R | 25 ++- README.md | 229 ++++++++++++++++---------------- build/vignette.rds |binary inst/doc/rdpla_vignette.Rmd | 189 +++++++++++++------------- inst/doc/rdpla_vignette.html | 191 +++++++++++++------------- inst/doc/use_case_churches.Rmd | 20 +- inst/doc/use_case_churches.html | 24 +-- inst/ignore/dpla_fields.r | 6 inst/img/unnamed-chunk-17-1.png |binary inst/vign/figure/unnamed-chunk-18-1.png |binary inst/vign/figure/unnamed-chunk-7-1.png |binary inst/vign/figure/unnamed-chunk-8-1.png |binary inst/vign/rdpla_vignette.Rmd | 2 inst/vign/rdpla_vignette.md | 189 +++++++++++++------------- inst/vign/use_case_churches.md | 20 +- man/country_codes.Rd | 5 man/dpla_bulk.Rd |only man/dpla_cache.Rd |only man/dpla_collections.Rd | 28 +-- man/dpla_fields.Rd | 5 man/dpla_get_key.Rd | 4 man/dpla_items.Rd | 41 ++--- man/language_codes.Rd | 5 man/rdpla-package.Rd | 18 ++ tests/testthat/test-dpla_items.R | 10 - tests/testthat/test-dpla_items_.R | 10 - vignettes/rdpla_vignette.Rmd | 189 +++++++++++++------------- vignettes/use_case_churches.Rmd | 20 +- 40 files changed, 745 insertions(+), 668 deletions(-)
Title: Visualization Package for CanvasXpress in R
Description: Enables creation of visualizations using the CanvasXpress framework
in R. CanvasXpress is a standalone JavaScript library for reproducible research
with complete tracking of data and end-user modifications stored in a single
PNG image that can be played back. See <http://canvasxpress.org> for more
information.
Author: Isaac Neuhaus [aut, cre],
Connie Brett [ctb]
Maintainer: Connie Brett <connie@aggregate-genius.com>
Diff between canvasXpress versions 0.16.6 dated 2017-07-18 and 0.16.7 dated 2017-08-13
DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ NEWS.md | 3 +++ inst/doc/additional_examples.html | 4 ++-- inst/doc/getting_started.html | 4 ++-- inst/htmlwidgets/canvasXpress.yaml | 2 +- inst/htmlwidgets/lib/canvasXpress/canvasXpress.min.js | 4 ++-- 7 files changed, 19 insertions(+), 16 deletions(-)
Title: Patient-Centered Network Meta-Analysis
Description: Performs arm-based network meta-analysis for datasets with binary, continuous, and count outcomes using the Bayesian methods of Zhang et al (2014) <doi:10.1177/1740774513498322> and Lin et al (2017) <doi:10.18637/jss.v080.i05>.
Author: Lifeng Lin, Jing Zhang, and Haitao Chu
Maintainer: Lifeng Lin <linl@stat.fsu.edu>
Diff between pcnetmeta versions 2.4 dated 2016-04-24 and 2.5 dated 2017-08-13
DESCRIPTION | 12 ++++++------ MD5 | 15 ++++++++------- inst |only man/nma.ab.bin.Rd | 2 ++ man/nma.ab.cont.Rd | 2 ++ man/nma.ab.followup.Rd | 2 ++ man/nma.ab.py.Rd | 2 ++ man/nma.networkplot.Rd | 4 ++++ man/pcnetmeta-package.Rd | 4 +++- 9 files changed, 29 insertions(+), 14 deletions(-)
Title: Organic Mass Spectrometry
Description: Organic/biological mass spectrometry data analysis.
Author: Nathan Dodder [cre, aut, cph],
Katharine Mullen [ctb]
Maintainer: Nathan Dodder <ndodder@mail.sdsu.edu>
Diff between OrgMassSpecR versions 0.5-2 dated 2017-08-11 and 0.5-3 dated 2017-08-13
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- inst/doc/OrgMassSpecR-examples.Rmd | 2 +- inst/doc/OrgMassSpecR-examples.html | 27 +++++++++++++-------------- vignettes/OrgMassSpecR-examples.Rmd | 2 +- 5 files changed, 23 insertions(+), 24 deletions(-)
Title: Performs a BLP Demand Estimation
Description: Provides the estimation algorithm to perform the demand estimation described in Berry, Levinsohn and Pakes (1995) <DOI:10.2307/2171802> . The routine uses analytic gradients and offers a large number of implemented integration methods and optimization routines.
Author: Daniel Brunner (aut), Constantin Weiser (ctr), Andre Romahn (ctr)
Maintainer: Daniel Brunner <daniel.brunner@hhu.de>
Diff between BLPestimatoR versions 0.1.4 dated 2017-05-05 and 0.1.5 dated 2017-08-13
BLPestimatoR-0.1.4/BLPestimatoR/src/BLPestimatoR_init.c |only BLPestimatoR-0.1.5/BLPestimatoR/DESCRIPTION | 6 BLPestimatoR-0.1.5/BLPestimatoR/MD5 | 17 BLPestimatoR-0.1.5/BLPestimatoR/NAMESPACE | 4 BLPestimatoR-0.1.5/BLPestimatoR/R/RcppExports.R | 12 BLPestimatoR-0.1.5/BLPestimatoR/R/blpFunctions.R | 2 BLPestimatoR-0.1.5/BLPestimatoR/R/get.BLP.dataset.R | 6 BLPestimatoR-0.1.5/BLPestimatoR/man/BLPestimatoR-package.Rd | 4 BLPestimatoR-0.1.5/BLPestimatoR/src/RcppExports.cpp | 50 +- BLPestimatoR-0.1.5/BLPestimatoR/src/cppFunctions.cpp | 267 +++++++----- 10 files changed, 237 insertions(+), 131 deletions(-)
Title: Interactive 3D Scatter Plots, Networks and Globes
Description: Create interactive 3D scatter plots, network plots, and
globes using the 'three.js' visualization library (<https://threejs.org>).
Author: B. W. Lewis [aut, cre],
Three.js authors [cph] (three.js JavaScript library),
Alexey Stukalov [ctb],
Yihui Xie [ctb],
Andreas Briese [ctb],
B. Thieurmel [ctb]
Maintainer: B. W. Lewis <blewis@illposed.net>
Diff between threejs versions 0.2.2 dated 2016-04-01 and 0.3.1 dated 2017-08-13
threejs-0.2.2/threejs/inst/htmlwidgets/graph.js |only threejs-0.2.2/threejs/inst/htmlwidgets/graph.yaml |only threejs-0.2.2/threejs/inst/htmlwidgets/lib/graph-1 |only threejs-0.2.2/threejs/inst/htmlwidgets/lib/threejs-70 |only threejs-0.2.2/threejs/man/graph2Matrix.Rd |only threejs-0.2.2/threejs/man/igraph2graphjs.Rd |only threejs-0.2.2/threejs/man/matrix2graph.Rd |only threejs-0.3.1/threejs/DESCRIPTION | 25 threejs-0.3.1/threejs/MD5 | 84 threejs-0.3.1/threejs/NAMESPACE | 23 threejs-0.3.1/threejs/R/data-definitions.R | 27 threejs-0.3.1/threejs/R/globe.R | 117 threejs-0.3.1/threejs/R/graph.R | 520 +-- threejs-0.3.1/threejs/R/scatterplot.R | 750 +++-- threejs-0.3.1/threejs/R/threejs.R | 3 threejs-0.3.1/threejs/R/utilities.R | 88 threejs-0.3.1/threejs/README.md | 156 - threejs-0.3.1/threejs/data/LeMis.RData |binary threejs-0.3.1/threejs/data/ego.RData |only threejs-0.3.1/threejs/demo |only threejs-0.3.1/threejs/inst/examples/globe/server.R | 10 threejs-0.3.1/threejs/inst/examples/graph |only threejs-0.3.1/threejs/inst/examples/scatterplot/server.R | 27 threejs-0.3.1/threejs/inst/examples/scatterplot/ui.R | 7 threejs-0.3.1/threejs/inst/htmlwidgets/globe.js | 38 threejs-0.3.1/threejs/inst/htmlwidgets/globe.yaml | 4 threejs-0.3.1/threejs/inst/htmlwidgets/lib/jquery |only threejs-0.3.1/threejs/inst/htmlwidgets/lib/threejs-85 |only threejs-0.3.1/threejs/inst/htmlwidgets/scatterplotThree.js | 1460 +++++++--- threejs-0.3.1/threejs/inst/htmlwidgets/scatterplotThree.yaml | 10 threejs-0.3.1/threejs/man/LeMis.Rd | 5 threejs-0.3.1/threejs/man/ego.Rd |only threejs-0.3.1/threejs/man/gcol.Rd |only threejs-0.3.1/threejs/man/globejs.Rd | 41 threejs-0.3.1/threejs/man/graphjs.Rd | 239 + threejs-0.3.1/threejs/man/lines3d.Rd |only threejs-0.3.1/threejs/man/points3d.Rd |only threejs-0.3.1/threejs/man/scatterplot3js.Rd | 205 - threejs-0.3.1/threejs/man/texture.Rd | 2 threejs-0.3.1/threejs/man/threejs-package.Rd | 1 threejs-0.3.1/threejs/man/threejs-shiny.Rd | 8 threejs-0.3.1/threejs/man/vertices-scatterplotThree-method.Rd |only threejs-0.3.1/threejs/tests/threejs.R | 30 43 files changed, 2619 insertions(+), 1261 deletions(-)
Title: Test Analysis Modules
Description: Includes marginal maximum likelihood estimation of uni- and
multidimensional item response models (Rasch, 2PL, 3PL,
Generalized Partial Credit, Multi Facets,
Nominal Item Response, Structured Latent Class Analysis,
Mixture Distribution IRT Models, Located Latent Class Models)
and joint maximum likelihood estimation for models
from the Rasch family.
Latent regression models and plausible value imputation are
also supported.
Author: Alexander Robitzsch [aut, cre], Thomas Kiefer [aut], Margaret Wu [aut]
Maintainer: Alexander Robitzsch <robitzsch@ipn.uni-kiel.de>
Diff between TAM versions 2.5-14 dated 2017-08-08 and 2.6-2 dated 2017-08-13
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- inst/NEWS | 21 +++++++++++++++++++++ man/tam.latreg.Rd | 2 +- 4 files changed, 29 insertions(+), 8 deletions(-)
Title: R Interface to Apache Spark
Description: R interface to Apache Spark, a fast and general engine for big data
processing, see <http://spark.apache.org>. This package supports connecting to
local and remote Apache Spark clusters, provides a 'dplyr' compatible back-end,
and provides an interface to Spark's built-in machine learning algorithms.
Author: Javier Luraschi [aut, cre],
Kevin Ushey [aut],
JJ Allaire [aut],
RStudio [cph],
The Apache Software Foundation [aut, cph]
Maintainer: Javier Luraschi <javier@rstudio.com>
Diff between sparklyr versions 0.6.1 dated 2017-08-06 and 0.6.2 dated 2017-08-13
sparklyr-0.6.1/sparklyr/inst/rstudio/connections/livy.R |only sparklyr-0.6.2/sparklyr/DESCRIPTION | 6 sparklyr-0.6.2/sparklyr/MD5 | 14 sparklyr-0.6.2/sparklyr/NEWS.md | 5 sparklyr-0.6.2/sparklyr/R/connection_shinyapp.R | 37 +- sparklyr-0.6.2/sparklyr/R/install_spark.R | 2 sparklyr-0.6.2/sparklyr/inst/rstudio/connections/Livy.R |only sparklyr-0.6.2/sparklyr/tests/testthat/log4j.spark.log | 150 +++++++--- sparklyr-0.6.2/sparklyr/tests/testthat/log4j.spark.log.2017-07-31 |only sparklyr-0.6.2/sparklyr/tests/testthat/log4j.spark.log.2017-08-09 |only 10 files changed, 151 insertions(+), 63 deletions(-)
Title: Import 'OpenStreetMap' Data as Simple Features or Spatial
Objects
Description: Download and import of 'OpenStreetMap' ('OSM') data as 'sf' or 'sp'
objects. 'OSM' data are extracted from the 'Overpass' web server and
processed with very fast 'C++' routines for return to 'R'.
Author: Mark Padgham [aut, cre],
Bob Rudis [aut],
Robin Lovelace [aut],
Maëlle Salmon [aut],
Andrew Smith [ctb],
Marcin Kalicinski [ctb, cph] (Author of included RapidXML code),
Finkelstein Noam [ctb, cph] (Author of included stub.R code),
Bartnik Lukasz [ctb, cph] (Author of included stub.R code)
Maintainer: Mark Padgham <mark.padgham@email.com>
Diff between osmdata versions 0.0.4 dated 2017-06-21 and 0.0.5 dated 2017-08-13
osmdata-0.0.4/osmdata/man/add_feature.Rd |only osmdata-0.0.5/osmdata/DESCRIPTION | 12 osmdata-0.0.5/osmdata/MD5 | 82 +- osmdata-0.0.5/osmdata/NAMESPACE | 6 osmdata-0.0.5/osmdata/NEWS.md | 7 osmdata-0.0.5/osmdata/R/RcppExports.R | 4 osmdata-0.0.5/osmdata/R/get-osmdata.R | 48 + osmdata-0.0.5/osmdata/R/getbb.R | 226 +++++- osmdata-0.0.5/osmdata/R/opq.R | 52 - osmdata-0.0.5/osmdata/R/osm-extract.R | 23 osmdata-0.0.5/osmdata/R/osmdata-class.R | 155 ---- osmdata-0.0.5/osmdata/R/osmdata-methods.R |only osmdata-0.0.5/osmdata/R/osmdata-package.R | 5 osmdata-0.0.5/osmdata/R/overpass-query.R | 9 osmdata-0.0.5/osmdata/R/trim-osmdata.R |only osmdata-0.0.5/osmdata/R/unique-osmdata.R |only osmdata-0.0.5/osmdata/build/vignette.rds |binary osmdata-0.0.5/osmdata/inst/doc/osm-sf-translation.R | 2 osmdata-0.0.5/osmdata/inst/doc/osm-sf-translation.Rmd | 2 osmdata-0.0.5/osmdata/inst/doc/osm-sf-translation.html | 6 osmdata-0.0.5/osmdata/inst/doc/osmdata.R | 372 ++++----- osmdata-0.0.5/osmdata/inst/doc/osmdata.Rmd | 448 +++++------- osmdata-0.0.5/osmdata/inst/doc/osmdata.html | 342 ++++----- osmdata-0.0.5/osmdata/man/add_osm_feature.Rd |only osmdata-0.0.5/osmdata/man/getbb.Rd | 35 osmdata-0.0.5/osmdata/man/opq.Rd | 18 osmdata-0.0.5/osmdata/man/osm_lines.Rd | 5 osmdata-0.0.5/osmdata/man/osm_multilines.Rd | 2 osmdata-0.0.5/osmdata/man/osm_multipolygons.Rd | 2 osmdata-0.0.5/osmdata/man/osm_polygons.Rd | 2 osmdata-0.0.5/osmdata/man/osmdata.Rd | 2 osmdata-0.0.5/osmdata/man/osmdata_pbf.Rd |only osmdata-0.0.5/osmdata/man/osmdata_sf.Rd | 4 osmdata-0.0.5/osmdata/man/osmdata_sp.Rd | 4 osmdata-0.0.5/osmdata/man/osmdata_xml.Rd | 4 osmdata-0.0.5/osmdata/man/trim_osmdata.Rd |only osmdata-0.0.5/osmdata/man/unique_osmdata.Rd |only osmdata-0.0.5/osmdata/src/RcppExports.cpp | 4 osmdata-0.0.5/osmdata/src/get-bbox.cpp | 1 osmdata-0.0.5/osmdata/src/osmdata-sp.cpp | 45 + osmdata-0.0.5/osmdata/src/osmdata_init.c | 8 osmdata-0.0.5/osmdata/src/trace-osm.cpp | 13 osmdata-0.0.5/osmdata/tests/testthat/test-osmdata.R | 14 osmdata-0.0.5/osmdata/tests/testthat/test-sf-construction.R | 11 osmdata-0.0.5/osmdata/vignettes/osm-sf-translation.Rmd | 2 osmdata-0.0.5/osmdata/vignettes/osmdata.Rmd | 448 +++++------- 46 files changed, 1235 insertions(+), 1190 deletions(-)
Title: Extended Structural Equation Modelling
Description: Facilitates treatment of statistical model specifications
as things that can be generated and manipulated programmatically.
Structural equation models may be specified with reticular action model matrices or paths,
linear structural relations matrices or paths, or
directly in matrix algebra.
Fit functions include full information maximum likelihood,
maximum likelihood, and weighted least squares.
Example models include confirmatory factor, multiple group, mixture
distribution, categorical threshold, modern test theory, differential
equations, state space, and many others.
Author: Steven M. Boker [aut],
Michael C. Neale [aut],
Hermine H. Maes [aut],
Michael J. Wilde [ctb],
Michael Spiegel [aut],
Timothy R. Brick [aut],
Ryne Estabrook [aut],
Timothy C. Bates [aut],
Paras Mehta [ctb],
Timo von Oertzen [ctb],
Ross J. Gore [aut],
Michael D. Hunter [aut],
Daniel C. Hackett [ctb],
Julian Karch [ctb],
Andreas M. Brandmaier [ctb],
Joshua N. Pritikin [aut, cre],
Mahsa Zahery [aut],
Robert M. Kirkpatrick [aut],
Yang Wang [ctb],
Charles Driver [ctb],
Massachusetts Institute of Technology [cph],
S. G. Johnson [cph],
Association for Computing Machinery [cph],
Dieter Kraft [cph],
Stefan Wilhelm [cph],
Manjunath B G [cph]
Maintainer: Joshua N. Pritikin <jpritikin@pobox.com>
Diff between OpenMx versions 2.7.15 dated 2017-08-08 and 2.7.16 dated 2017-08-13
OpenMx-2.7.15/OpenMx/inst/models/failing/BivariateSaturated_WLSMatrixCov.R |only OpenMx-2.7.15/OpenMx/inst/models/failing/ComputeOrderError.R |only OpenMx-2.7.15/OpenMx/inst/models/failing/ExtraOrdinalVars.R |only OpenMx-2.7.15/OpenMx/inst/models/failing/NTF_design.R |only OpenMx-2.7.15/OpenMx/inst/models/failing/NameParameterOverlap.R |only OpenMx-2.7.15/OpenMx/inst/models/failing/PPML_100days.R |only OpenMx-2.7.15/OpenMx/inst/models/failing/UnivariateTwinAnalysis20090925.R |only OpenMx-2.7.15/OpenMx/inst/models/failing/categoricalDefinitionTest.R |only OpenMx-2.7.15/OpenMx/inst/models/failing/challengingCI.R |only OpenMx-2.7.15/OpenMx/inst/models/failing/fail_on_re-run_entity_already_exists.R |only OpenMx-2.7.15/OpenMx/inst/models/failing/thresholdModel1Factor3Variate5000.R |only OpenMx-2.7.16/OpenMx/DESCRIPTION | 18 OpenMx-2.7.16/OpenMx/MD5 | 272 ++-- OpenMx-2.7.16/OpenMx/NAMESPACE | 12 OpenMx-2.7.16/OpenMx/NEWS | 8 OpenMx-2.7.16/OpenMx/R/0ClassUnion.R | 69 + OpenMx-2.7.16/OpenMx/R/MxCompare.R | 590 +++++++++- OpenMx-2.7.16/OpenMx/R/MxCompute.R | 220 +++ OpenMx-2.7.16/OpenMx/R/MxData.R | 67 - OpenMx-2.7.16/OpenMx/R/MxDataWLS.R | 45 OpenMx-2.7.16/OpenMx/R/MxEval.R | 74 + OpenMx-2.7.16/OpenMx/R/MxExpectationBA81.R | 11 OpenMx-2.7.16/OpenMx/R/MxExpectationLISREL.R | 18 OpenMx-2.7.16/OpenMx/R/MxExpectationMixture.R |only OpenMx-2.7.16/OpenMx/R/MxExpectationNormal.R | 73 + OpenMx-2.7.16/OpenMx/R/MxFitFunctionML.R | 2 OpenMx-2.7.16/OpenMx/R/MxInterval.R | 29 OpenMx-2.7.16/OpenMx/R/MxModel.R | 15 OpenMx-2.7.16/OpenMx/R/MxOptions.R | 49 OpenMx-2.7.16/OpenMx/R/MxRAMModel.R | 2 OpenMx-2.7.16/OpenMx/R/MxRobustSE.R | 134 +- OpenMx-2.7.16/OpenMx/R/MxRun.R | 115 + OpenMx-2.7.16/OpenMx/R/MxSE.R | 41 OpenMx-2.7.16/OpenMx/R/MxSaturatedModel.R | 3 OpenMx-2.7.16/OpenMx/R/MxSummary.R | 291 ++++ OpenMx-2.7.16/OpenMx/R/MxThreshold.R | 68 - OpenMx-2.7.16/OpenMx/R/MxTryHard.R | 64 - OpenMx-2.7.16/OpenMx/R/MxTypes.R | 2 OpenMx-2.7.16/OpenMx/R/MxVersion.R | 9 OpenMx-2.7.16/OpenMx/R/MxVersion.R.in | 7 OpenMx-2.7.16/OpenMx/R/cache.R | 1 OpenMx-2.7.16/OpenMx/configure | 10 OpenMx-2.7.16/OpenMx/inst/CITATION | 2 OpenMx-2.7.16/OpenMx/inst/models/codeRed |only OpenMx-2.7.16/OpenMx/inst/models/failing/All_models_that_seem_fine |only OpenMx-2.7.16/OpenMx/inst/models/failing/CSOLNPmtcars.R | 42 OpenMx-2.7.16/OpenMx/inst/models/failing/OrdinalLargeSample.R | 69 - OpenMx-2.7.16/OpenMx/inst/models/failing/SimpleConfidenceIntervals.R | 135 -- OpenMx-2.7.16/OpenMx/inst/models/failing/lacks_mention_of_what_fails |only OpenMx-2.7.16/OpenMx/inst/models/failing/no_longer_able_to_be_run |only OpenMx-2.7.16/OpenMx/inst/models/failing/thresholdsCross.R | 28 OpenMx-2.7.16/OpenMx/inst/models/nightly/BootLRT.R |only OpenMx-2.7.16/OpenMx/inst/models/nightly/FactorScores.R | 51 OpenMx-2.7.16/OpenMx/inst/models/nightly/MultigroupRobustSE_test.R |only OpenMx-2.7.16/OpenMx/inst/models/nightly/NelderMeadUnitTesting.R | 8 OpenMx-2.7.16/OpenMx/inst/models/nightly/ParamBoot2.R |only OpenMx-2.7.16/OpenMx/inst/models/nightly/RAM-3Factor-24Indicators-covdata-a.R | 20 OpenMx-2.7.16/OpenMx/inst/models/nightly/StateSpaceLatentGrowth.R |only OpenMx-2.7.16/OpenMx/inst/models/nightly/fm-example2-1.R | 2 OpenMx-2.7.16/OpenMx/inst/models/nightly/fm-example2-4.R | 2 OpenMx-2.7.16/OpenMx/inst/models/nightly/fm-example2-8.R | 6 OpenMx-2.7.16/OpenMx/inst/models/passing/AlgebraComputePassing.R | 4 OpenMx-2.7.16/OpenMx/inst/models/passing/BukinN2_regressiontest.R |only OpenMx-2.7.16/OpenMx/inst/models/passing/ContinuousOnlyWLSTest.R | 4 OpenMx-2.7.16/OpenMx/inst/models/passing/IntroSEM-BivariateRaw.R | 38 OpenMx-2.7.16/OpenMx/inst/models/passing/IntroSEM-BivariateStd.R | 7 OpenMx-2.7.16/OpenMx/inst/models/passing/IntroSEM-OneFactorCov.R | 2 OpenMx-2.7.16/OpenMx/inst/models/passing/JointFIMLRegressionTest.R | 4 OpenMx-2.7.16/OpenMx/inst/models/passing/MxTryHardTest.R | 17 OpenMx-2.7.16/OpenMx/inst/models/passing/NameParameterOverlap.R |only OpenMx-2.7.16/OpenMx/inst/models/passing/NelderMeadTest--ineqConstraints.R | 4 OpenMx-2.7.16/OpenMx/inst/models/passing/OrdinalTest.R | 8 OpenMx-2.7.16/OpenMx/inst/models/passing/Rampart0.R |only OpenMx-2.7.16/OpenMx/inst/models/passing/Rampart1.R | 8 OpenMx-2.7.16/OpenMx/inst/models/passing/RawCov.R | 2 OpenMx-2.7.16/OpenMx/inst/models/passing/RenameAndSummary.R | 2 OpenMx-2.7.16/OpenMx/inst/models/passing/SaturatedWLSTest.R | 3 OpenMx-2.7.16/OpenMx/inst/models/passing/SimpleAlgebraCIs.R | 19 OpenMx-2.7.16/OpenMx/inst/models/passing/SimpleConfidenceIntervals.R | 1 OpenMx-2.7.16/OpenMx/inst/models/passing/SimpleMix.R |only OpenMx-2.7.16/OpenMx/inst/models/passing/bivLognormDemo.R | 17 OpenMx-2.7.16/OpenMx/inst/models/passing/checkStandardizedLoadingsEtcetera.R | 39 OpenMx-2.7.16/OpenMx/inst/models/passing/data/heck-thomas-2015ch4.rda |only OpenMx-2.7.16/OpenMx/inst/models/passing/heck-thomas-2015ch4.R |only OpenMx-2.7.16/OpenMx/inst/models/passing/ifa-drm1.R | 12 OpenMx-2.7.16/OpenMx/inst/models/passing/ifa-grm1.R | 11 OpenMx-2.7.16/OpenMx/inst/models/passing/joinErrors.R | 6 OpenMx-2.7.16/OpenMx/inst/models/passing/jointFactorWls.R | 11 OpenMx-2.7.16/OpenMx/inst/models/passing/lmer-1.R | 9 OpenMx-2.7.16/OpenMx/inst/models/passing/rfitfunc.R | 7 OpenMx-2.7.16/OpenMx/inst/models/passing/startingValues.R | 4 OpenMx-2.7.16/OpenMx/inst/models/passing/stdizedRAMpaths--UserProvidedCov.R |only OpenMx-2.7.16/OpenMx/inst/models/passing/test_mxBootstrapStdizeRAMpaths.R |only OpenMx-2.7.16/OpenMx/inst/models/passing/thresholdModel1Factor3Variate5000.R |only OpenMx-2.7.16/OpenMx/man/as.statusCode.Rd |only OpenMx-2.7.16/OpenMx/man/imxGetNumThreads.Rd |only OpenMx-2.7.16/OpenMx/man/imxReportProgress.Rd | 27 OpenMx-2.7.16/OpenMx/man/imxRobustSE.Rd | 9 OpenMx-2.7.16/OpenMx/man/imxRowGradients.Rd | 4 OpenMx-2.7.16/OpenMx/man/mxBootstrap.Rd |only OpenMx-2.7.16/OpenMx/man/mxBootstrapEval.Rd |only OpenMx-2.7.16/OpenMx/man/mxBootstrapStdizeRAMpaths.Rd |only OpenMx-2.7.16/OpenMx/man/mxCompare.Rd | 68 + OpenMx-2.7.16/OpenMx/man/mxComputeBootstrap.Rd |only OpenMx-2.7.16/OpenMx/man/mxComputeGenerateData.Rd |only OpenMx-2.7.16/OpenMx/man/mxComputeNelderMead.Rd | 10 OpenMx-2.7.16/OpenMx/man/mxData.Rd | 11 OpenMx-2.7.16/OpenMx/man/mxDataWLS.Rd | 9 OpenMx-2.7.16/OpenMx/man/mxExpectationBA81.Rd | 11 OpenMx-2.7.16/OpenMx/man/mxExpectationHiddenMarkov.Rd | 4 OpenMx-2.7.16/OpenMx/man/mxExpectationMixture.Rd |only OpenMx-2.7.16/OpenMx/man/mxGenerateData.Rd | 6 OpenMx-2.7.16/OpenMx/man/mxOption.Rd | 6 OpenMx-2.7.16/OpenMx/man/mxParametricBootstrap.Rd |only OpenMx-2.7.16/OpenMx/man/mxSE.Rd | 6 OpenMx-2.7.16/OpenMx/man/mxStandardizeRAMpaths.Rd | 17 OpenMx-2.7.16/OpenMx/man/mxTryHard.Rd | 13 OpenMx-2.7.16/OpenMx/man/omxGetBootstrapReplications.Rd |only OpenMx-2.7.16/OpenMx/man/omxHasDefaultComputePlan.Rd |only OpenMx-2.7.16/OpenMx/man/summary.MxModel.Rd | 84 - 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Title: K-Sample Rank Tests and their Combinations
Description: Compares k samples using the Anderson-Darling test, Kruskal-Wallis type tests
with different rank score criteria, Steel's multiple comparison test, and the
Jonckheere-Terpstra (JT) test. It computes asymptotic, simulated or (limited) exact
P-values, all valid under randomization, with or without ties, or conditionally
under random sampling from populations, given the observed tie pattern. Except for
Steel's test and the JT test it also combines these tests across several blocks of
samples. Also analyzed are 2 x t contingency tables and their blocked combinations
using the Kruskal-Wallis criterion. Steel's test is inverted to provide simultaneous
confidence bounds for shift parameters. A plotting function compares tail probabilities
obtained under asymptotic approximation with those obtained via simulation or exact
calculations.
Author: Fritz Scholz [aut, cre],
Angie Zhu [aut]
Maintainer: Fritz Scholz <fscholz@u.washington.edu>
Diff between kSamples versions 1.2-6 dated 2017-06-14 and 1.2-7 dated 2017-08-13
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/listmake.R | 2 +- inst/NEWS.Rd | 10 +++++++++- 4 files changed, 17 insertions(+), 9 deletions(-)
Title: Provides Easy Downloading Capabilities for the UK Parliament API
Description: Provides functions to download data from the <http://www.data.parliament.uk/> APIs. Because of the structure of the API, there is a named function for each type of available data for ease of use, as well as some functions designed to retrieve specific pieces of commonly used data. Functions for each new API will be added as and when they become available.
Author: Evan Odell [aut, cre]
Maintainer: Evan Odell <evanodell91@gmail.com>
Diff between hansard versions 0.5.0 dated 2017-07-10 and 0.5.2 dated 2017-08-13
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hansard-0.5.2/hansard/man/bills.Rd | 106 - hansard-0.5.2/hansard/man/commons_answered_questions.Rd | 118 +- hansard-0.5.2/hansard/man/commons_division_date.Rd | 68 - hansard-0.5.2/hansard/man/commons_divisions.Rd | 92 - hansard-0.5.2/hansard/man/commons_oral_question_times.Rd | 106 - hansard-0.5.2/hansard/man/commons_oral_questions.Rd | 114 +- hansard-0.5.2/hansard/man/commons_terms.Rd | 82 - hansard-0.5.2/hansard/man/commons_written_questions.Rd | 98 - hansard-0.5.2/hansard/man/constituencies.Rd | 78 - hansard-0.5.2/hansard/man/early_day_motions.Rd | 108 - hansard-0.5.2/hansard/man/election_candidates.Rd | 96 - hansard-0.5.2/hansard/man/election_results.Rd | 112 +- hansard-0.5.2/hansard/man/elections.Rd | 96 - hansard-0.5.2/hansard/man/epetition.Rd | 82 - hansard-0.5.2/hansard/man/epetition_tibble.Rd | 106 - hansard-0.5.2/hansard/man/hansard.Rd | 162 +- hansard-0.5.2/hansard/man/hansard_generic.Rd | 46 hansard-0.5.2/hansard/man/lord_vote_record.Rd | 92 - hansard-0.5.2/hansard/man/lords_amendments.Rd | 94 - 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Title: Unified Parallel and Distributed Processing in R for Everyone
Description: The purpose of this package is to provide a lightweight and
unified Future API for sequential and parallel processing of R
expression via futures. The simplest way to evaluate an expression
in parallel is to use `x %<-% { expression }` with `plan(multiprocess)`.
This package implements sequential, multicore, multisession, and
cluster futures. With these, R expressions can be evaluated on the
local machine, on in parallel a set of local machines, or distributed
on a mix of local and remote machines.
Extensions to this package implements additional backends for
processing futures via compute cluster schedulers etc.
Because of its unified API, there is no need to modify code in order
switch from sequential on the local machine to, say, distributed
processing on a remote compute cluster.
Another strength of this package is that global variables and functions
are automatically identified and exported as needed, making it
straightforward to tweak existing code to make use of futures.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Diff between future versions 1.5.0 dated 2017-05-26 and 1.6.0 dated 2017-08-13
future-1.5.0/future/inst/doc/future-1-overview.html |only future-1.5.0/future/tests/DEPRECATED.eager.R |only future-1.5.0/future/tests/DEPRECATED.lazy.R |only future-1.5.0/future/tests/deprecated.R |only future-1.6.0/future/DESCRIPTION | 8 - future-1.6.0/future/MD5 | 55 +++----- future-1.6.0/future/NAMESPACE | 3 future-1.6.0/future/NEWS | 28 ++++ future-1.6.0/future/R/DEPRECATED.R | 36 ----- future-1.6.0/future/R/future.R | 17 -- future-1.6.0/future/R/futureAssign.R | 7 - future-1.6.0/future/R/futureAssign_OP.R | 4 future-1.6.0/future/R/futureCall.R | 2 future-1.6.0/future/R/remote.R | 2 future-1.6.0/future/R/tweak.R | 38 +++++ future-1.6.0/future/R/tweakExpression.R | 4 future-1.6.0/future/R/zzz.plan.R | 88 +++++------- future-1.6.0/future/build/vignette.rds |binary future-1.6.0/future/man/cluster.Rd | 3 future-1.6.0/future/man/future.Rd | 15 -- future-1.6.0/future/man/multicore.Rd | 3 future-1.6.0/future/man/multisession.Rd | 3 future-1.6.0/future/man/remote.Rd | 3 future-1.6.0/future/man/sequential.Rd | 3 future-1.6.0/future/tests/DEPRECATED_DEFUNCT.R |only future-1.6.0/future/tests/Future-class.R | 3 future-1.6.0/future/tests/cluster.R | 137 +++++++++++++++----- future-1.6.0/future/tests/future_lapply,globals.R | 34 +++- future-1.6.0/future/tests/incl/start,load-only.R | 1 future-1.6.0/future/tests/nbrOfWorkers.R | 8 + future-1.6.0/future/tests/tweak.R | 3 31 files changed, 301 insertions(+), 207 deletions(-)
Title: Full Factorials, Orthogonal Arrays and Base Utilities for DoE
Packages
Description: Package DoE.base creates full factorial experimental designs and designs based on orthogonal arrays for (industrial) experiments. Additionally, it provides utility functions for the class design, which is also used by other packages for designed experiments.
Author: Ulrike Groemping [aut, cre],
Boyko Amarov [ctb],
Hongquan Xu [ctb]
Maintainer: Ulrike Groemping <groemping@beuth-hochschule.de>
Diff between DoE.base versions 0.30 dated 2017-03-24 and 0.31 dated 2017-08-13
DESCRIPTION | 10 MD5 | 32 +- NAMESPACE | 3 R/fastlengths.R | 11 R/oa_feasible.R |only R/print.oa.R |only R/printandsummary.design.R | 16 - inst/NEWS | 12 + man/DoE.base-package.Rd | 6 man/GRind.Rd | 61 ++--- man/GWLP.Rd | 6 man/ICFTs.Rd | 5 man/generalized.word.length.Rd | 487 +++++++++++++++++++++-------------------- man/oa.design.Rd | 355 +++++++++++++++-------------- man/oa_feasible.Rd |only man/print.oa.Rd |only tests/test_aggregate.Rout.save | 21 + tests/test_cross.Rout.save | 30 +- tests/test_reshape.Rout.save | 12 - 19 files changed, 577 insertions(+), 490 deletions(-)
Title: 'd3.js' Utilities for R
Description: Helper functions for using 'd3.js' in R.
Author: Mike Bostock [aut, cph] (d3.js library in htmlwidgets/lib,
http://d3js.org),
Kent Russell [aut, cre] (R interface),
Gregor Aisch [aut, cph] (d3-jetpack creator,
https://github.com/gka/d3-jetpack),
Adam Pearce [aut] (core contributor to d3-jetpack),
Ben Ortiz [ctb]
Maintainer: Kent Russell <kent.russell@timelyportfolio.com>
Diff between d3r versions 0.6.6 dated 2017-06-27 and 0.6.8 dated 2017-08-13
DESCRIPTION | 28 MD5 | 29 NAMESPACE | 1 NEWS.md | 18 R/dependencies.R | 35 R/table.R | 12 inst/examples/example_d3_jetpack.R |only inst/www/d3/d3-jetpack |only inst/www/d3/v4/API.md | 2422 ++++++++++++++++---------------- inst/www/d3/v4/CHANGES.md | 2734 ++++++++++++++++++------------------- inst/www/d3/v4/LICENSE | 54 inst/www/d3/v4/README.md | 114 - inst/www/d3/v4/dist/d3.min.js | 10 man/d3_dep_jetpack.Rd |only tests/testthat/test_deps.R | 18 tests/testthat/test_table.R | 8 16 files changed, 2781 insertions(+), 2702 deletions(-)