Title: Multivariate Multinomial Distribution Approximation and
Imputation for Incomplete Data
Description: Fit incomplete categorical data with infinite mixture of multinomial distribution
(Dunson and Xing (2009) <DOI:10.1198/jasa.2009.tm08439>). Perform efficient missing data imputation and
other statistical inference based on joint distribution estimation.
Author: Chaojie Wang
Maintainer: Chaojie Wang <wang910930@163.com>
Diff between MMDai versions 1.2.0 dated 2017-03-18 and 1.3.0 dated 2017-10-02
MMDai-1.2.0/MMDai/R/ChiSquareTest.R |only MMDai-1.2.0/MMDai/R/Classification.R |only MMDai-1.2.0/MMDai/R/Correlation.R |only MMDai-1.2.0/MMDai/R/DBhattacharyya.R |only MMDai-1.2.0/MMDai/R/FactorToMatrix.R |only MMDai-1.2.0/MMDai/R/FisherTest.R |only MMDai-1.2.0/MMDai/R/JointTable.R |only MMDai-1.2.0/MMDai/R/JointTableEst.R |only MMDai-1.2.0/MMDai/R/MatrixToFactor.R |only MMDai-1.2.0/MMDai/R/MutualInfo.R |only MMDai-1.2.0/MMDai/R/SampleJointTable.R |only MMDai-1.2.0/MMDai/R/SignTest.R |only MMDai-1.2.0/MMDai/man/ChiSquareTest.Rd |only MMDai-1.2.0/MMDai/man/Classification.Rd |only MMDai-1.2.0/MMDai/man/Correlation.Rd |only MMDai-1.2.0/MMDai/man/DBhattacharyya.Rd |only MMDai-1.2.0/MMDai/man/FactorToMatrix.Rd |only MMDai-1.2.0/MMDai/man/FisherTest.Rd |only MMDai-1.2.0/MMDai/man/JointTable.Rd |only MMDai-1.2.0/MMDai/man/JointTableEst.Rd |only MMDai-1.2.0/MMDai/man/MatrixToFactor.Rd |only MMDai-1.2.0/MMDai/man/MutualInfo.Rd |only MMDai-1.2.0/MMDai/man/SampleJointTable.Rd |only MMDai-1.2.0/MMDai/man/SignTest.Rd |only MMDai-1.3.0/MMDai/DESCRIPTION | 8 +-- MMDai-1.3.0/MMDai/MD5 | 48 ++++--------------- MMDai-1.3.0/MMDai/NAMESPACE | 12 ---- MMDai-1.3.0/MMDai/R/GenerateData.R | 38 ++++----------- MMDai-1.3.0/MMDai/R/Imputation.R | 73 ++++++++---------------------- MMDai-1.3.0/MMDai/R/ParEst.R | 55 +++++++++------------- MMDai-1.3.0/MMDai/R/kIdentifier.R | 48 ++++++------------- MMDai-1.3.0/MMDai/man/GenerateData.Rd | 22 ++------- MMDai-1.3.0/MMDai/man/Imputation.Rd | 7 -- MMDai-1.3.0/MMDai/man/InitialPsi.Rd | 1 MMDai-1.3.0/MMDai/man/MovieRate.Rd | 1 MMDai-1.3.0/MMDai/man/ParEst.Rd | 5 -- MMDai-1.3.0/MMDai/man/kIdentifier.Rd | 7 +- 37 files changed, 99 insertions(+), 226 deletions(-)
More information about RDocumentation at CRAN
Permanent link
Title: Perceptual Analysis, Visualization and Organization of Spectral
Color Data in R
Description: A cohesive framework for parsing, analyzing and organizing color from spectral data.
Author: Rafael Maia [aut, cre],
Thomas White [aut],
Chad Eliason [aut],
Pierre-Paul Bitton [aut]
Maintainer: Rafael Maia <rm72@zips.uakron.edu>
Diff between pavo versions 1.3.0 dated 2017-09-20 and 1.3.1 dated 2017-10-02
DESCRIPTION | 8 +-- MD5 | 33 +++++++++---- NAMESPACE | 2 NEWS.md | 10 +++ R/bootcoldist.R |only R/coldist.R | 25 +++++---- R/getspec.R | 63 ++++++++++++++++++------- R/summary.rspec.R | 6 +- R/tetraplot.R | 108 +++++++++++++++++++++++++++++++++---------- inst/doc/pavo.html | 85 +++++++++++++++------------------ inst/testdata |only man/bootcoldist.Rd |only man/summary.rspec.Rd | 2 man/tetraplot.Rd | 8 +-- tests/testthat/test-import.R |only 15 files changed, 228 insertions(+), 122 deletions(-)
Title: Connect to ODBC Compatible Databases (using the DBI Interface)
Description: A DBI-compatible interface to ODBC databases.
Author: Jim Hester [aut, cre],
Hadley Wickham [aut],
lexicalunit [cph] (nanodbc library),
Google Inc. [cph] (cctz library),
RStudio [cph, fnd]
Maintainer: Jim Hester <james.hester@rstudio.com>
Diff between odbc versions 1.1.1 dated 2017-06-27 and 1.1.2 dated 2017-10-02
.aspell |only DESCRIPTION | 13 ++-- MD5 | 53 ++++++++-------- NAMESPACE | 2 NEWS.md | 26 ++++++++ R/Connection.R | 25 ++++++- R/DataTypes.R | 52 ++++++++++++++-- R/Driver.R | 19 ++++- R/RcppExports.R | 58 +++++++++-------- R/Table.R | 27 ++++---- R/Viewer.R | 99 +++++++++++++++++++----------- R/db_oracle.R |only R/hidden.R |only R/utils.R | 3 README.md | 47 +++++++------- build/odbc.pdf |binary configure | 4 - man/dbConnect-OdbcDriver-method.Rd | 9 ++ man/hidden_aliases.Rd |only man/odbc-tables.Rd | 6 - man/odbcDataType.Rd | 2 man/test_roundtrip.Rd | 7 +- src/Makevars.in | 4 - src/Makevars.win | 1 src/RcppExports.cpp | 120 ++++++++++++++++++++----------------- src/connection.cpp | 21 +++++- src/odbc_connection.cpp | 14 +++- src/odbc_connection.h | 14 ++++ src/odbc_result.cpp | 30 ++++++++- tests/testthat/test-PostgreSQL.R | 39 +++++++++--- 30 files changed, 468 insertions(+), 227 deletions(-)
Title: HTTP Client
Description: A simple HTTP client, with tools for making HTTP requests,
and mocking HTTP requests. The package is built on R6, and takes
inspiration from Ruby's 'faraday' gem (<https://rubygems.org/gems/faraday>).
The package name is a play on curl, the widely used command line tool
for HTTP, and this package is built on top of the R package 'curl', an
interface to 'libcurl' (<https://curl.haxx.se/libcurl>).
Author: Scott Chamberlain [aut, cre]
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>
Diff between crul versions 0.3.8 dated 2017-06-14 and 0.4.0 dated 2017-10-02
DESCRIPTION | 8 ++-- MD5 | 64 +++++++++++++++++---------------- NAMESPACE | 2 + NEWS.md | 20 ++++++++++ R/body.R | 30 ++++++++------- R/client.R | 80 +++++++++++++++++++++++++++++------------- R/cookies.R |only R/handle.R | 24 ++++++++++++ R/httprequest.R | 21 ++--------- R/make_url.R | 12 +----- R/post-requests.R | 23 +++++++----- R/upload.R |only R/writing-options.R | 4 -- R/zzz.R | 49 +++++++++++++++++++++---- README.md | 55 +++++++++++++++------------- build/vignette.rds |binary inst/doc/async.Rmd | 40 +++++++++------------ inst/doc/async.html | 40 +++++++++------------ inst/doc/crul_vignette.Rmd | 53 +++++++++++++++------------ inst/doc/crul_vignette.html | 53 +++++++++++++++------------ inst/doc/how-to-use-crul.Rmd | 8 ++-- inst/doc/how-to-use-crul.html | 8 ++-- man/HttpClient.Rd | 11 ++++- man/HttpRequest.Rd | 2 - man/cookies.Rd |only man/post-requests.Rd | 23 +++++++----- man/upload.Rd |only man/writing-options.Rd | 4 -- tests/testthat/test-async.R | 4 +- tests/testthat/test-headers.R | 5 +- tests/testthat/test-paths.R | 1 tests/testthat/test-post.R | 41 +++++++++++++++++++++ vignettes/async.Rmd | 40 +++++++++------------ vignettes/crul_vignette.Rmd | 53 +++++++++++++++------------ vignettes/how-to-use-crul.Rmd | 8 ++-- 35 files changed, 474 insertions(+), 312 deletions(-)
Title: Text Corpus Analysis
Description: Text corpus data analysis, with full support for international text (Unicode). Functions for reading data from newline-delimited JSON files, for normalizing and tokenizing text, for searching for term occurrences, and for computing term occurrence frequencies, including n-grams.
Author: Patrick O. Perry [aut, cph, cre],
Finn Årup Nielsen [cph, dtc] (AFINN Sentiment Lexicon),
Martin Porter and Richard Boulton [ctb, cph, dtc] (Snowball Stemmer and
Stopword Lists),
Carlo Strapparava and Alessandro Valitutti [cph, dtc] (WordNet-Affect
Lexicon),
Unicode, Inc. [cph, dtc] (Unicode Character Database)
Maintainer: Patrick O. Perry <pperry@stern.nyu.edu>
Diff between corpus versions 0.9.2 dated 2017-09-20 and 0.9.3 dated 2017-10-02
DESCRIPTION | 11 MD5 | 200 ++++--- NAMESPACE | 14 NEWS | 51 +- R/coerce.R | 47 + R/deprecated.R | 42 - R/stem.R |only R/term.R | 7 R/text_filter.R | 14 R/text_locate.R | 12 R/text_types.R | 4 R/token.R | 9 R/wordlist.R | 2 README | 52 +- build/vignette.rds |binary inst/doc/chinese.Rmd | 31 - inst/doc/chinese.html | 7 inst/doc/corpus.Rmd | 238 ++++----- inst/doc/corpus.html | 193 +++---- inst/doc/stemmer.Rmd |only inst/doc/stemmer.html |only inst/doc/textdata.Rmd | 51 +- inst/doc/textdata.html | 23 inst/doc/unicode.Rmd | 6 inst/doc/unicode.html | 6 man/corpus-deprecated.Rd | 43 - man/new_stemmer.Rd |only man/stem_snowball.Rd |only man/text_filter.Rd | 43 - man/text_locate.Rd | 4 man/text_sub.Rd | 6 man/text_tokens.Rd | 188 +++---- man/utf8.Rd | 4 src/Makevars | 8 src/context.c | 1 src/corpus/TODO.md | 3 src/corpus/corpus.xcodeproj/project.pbxproj | 16 src/corpus/src/data.c | 1 src/corpus/src/datatype.c | 3 src/corpus/src/filter.c | 709 ++++++++++++++++------------ src/corpus/src/filter.h | 96 +-- src/corpus/src/main.c | 1 src/corpus/src/main_get.c | 1 src/corpus/src/main_ngrams.c | 39 + src/corpus/src/main_scan.c | 1 src/corpus/src/main_sentences.c | 1 src/corpus/src/main_tokens.c | 42 + src/corpus/src/ngram.c | 1 src/corpus/src/search.c | 7 src/corpus/src/stem.c |only src/corpus/src/stem.h |only src/corpus/src/symtab.c | 93 +-- src/corpus/src/symtab.h | 22 src/corpus/src/typemap.c | 238 --------- src/corpus/src/typemap.h | 35 - src/corpus/src/unicode.c | 124 ++++ src/corpus/src/unicode.h | 18 src/corpus/src/unicode/wordbreakprop.h | 8 src/corpus/src/wordscan.c | 63 +- src/corpus/src/wordscan.h | 6 src/corpus/tests/check_data.c | 1 src/corpus/tests/check_filter.c | 118 ++-- src/corpus/tests/check_search.c | 10 src/corpus/tests/check_stem.c |only src/corpus/tests/check_symtab.c | 3 src/corpus/tests/check_typemap.c | 52 -- src/corpus/tests/check_unicode.c | 57 ++ src/corpus/tests/check_wordscan.c | 46 + src/corpus/util/compute-wbchanges.py |only src/corpus/util/gen-decompose.py | 39 - src/corpus/util/gen-wordbreak.py | 7 src/corpus/util/unicode_data.py | 81 +++ src/init.c | 3 src/json.c | 1 src/print_table.c | 14 src/rcorpus.h | 42 + src/stemmer.c |only src/term_counts.c | 11 src/term_matrix.c | 11 src/termset.c | 123 ++-- src/text.c | 4 src/text_filter.c | 187 ++++--- src/text_nunit.c | 41 - src/text_split.c | 21 src/text_sub.c | 11 src/text_tokens.c | 41 - src/text_types.c | 20 src/utf8_normalize.c | 2 src/util.c | 15 src/wordlist.c | 1 tests/testthat/test-foreign.R | 8 tests/testthat/test-stemmer.R |only tests/testthat/test-term_matrix.R | 20 tests/testthat/test-term_stats.R | 2 tests/testthat/test-text_base.R | 6 tests/testthat/test-text_filter.R | 35 - tests/testthat/test-text_locate.R | 2 tests/testthat/test-text_nunit.R | 11 tests/testthat/test-text_sub.R | 16 tests/testthat/test-text_tokens.R | 32 - tests/testthat/test-text_types.R | 4 tests/testthat/test-utf8_normalize.R | 2 vignettes/chinese.Rmd | 31 - vignettes/corpus.Rmd | 238 ++++----- vignettes/stemmer.Rmd |only vignettes/textdata.Rmd | 51 +- vignettes/unicode.Rmd | 6 107 files changed, 2214 insertions(+), 2057 deletions(-)
Title: The Grammar of Tables
Description: Provides an extensible formula system to quickly and easily create
production quality tables. The steps of the process are formula parser,
statistical content generation from data, to rendering. Each step of the process
is separate and user definable thus creating a set of building blocks for
highly extensible table generation. A user is not limited by any of the
choices of the package creator other than the formula grammar. For example,
one could chose to add a different S3 rendering function and output a format
not provided in the default package. Or possibly one would rather have Gini
coefficients for their statistical content. Routines to achieve New England
Journal of Medicine style, Lancet style and Hmisc::summaryM() statistics are
provided. The package contains rendering for HTML5, Rmarkdown and an indexing
format for use in tracing and tracking are provided.
Author: Shawn Garbett [aut, cre],
Thomas Stewart [ctb],
Jennifer Thompson [ctb],
Frank Harrell [ctb]
Maintainer: Shawn Garbett <Shawn.Garbett@Vanderbilt.edu>
Diff between tangram versions 0.3 dated 2017-06-27 and 0.3.2 dated 2017-10-02
tangram-0.3.2/tangram/DESCRIPTION | 19 - tangram-0.3.2/tangram/MD5 | 93 +++--- tangram-0.3.2/tangram/NAMESPACE | 30 +- tangram-0.3.2/tangram/R/compile-cell.R | 29 + tangram-0.3.2/tangram/R/compile-operators.R | 28 + tangram-0.3.2/tangram/R/compile.R | 40 +- tangram-0.3.2/tangram/R/parser.R | 13 tangram-0.3.2/tangram/R/render-html5.R | 29 + tangram-0.3.2/tangram/R/render-latex-map.R | 201 +++++++++++-- tangram-0.3.2/tangram/R/render-latex.R |only tangram-0.3.2/tangram/R/render-rmd.R | 18 - tangram-0.3.2/tangram/R/render-rtf.R |only tangram-0.3.2/tangram/R/render-summary.R | 181 +++++++++--- tangram-0.3.2/tangram/R/transform-hmisc.R |only tangram-0.3.2/tangram/README.md | 2 tangram-0.3.2/tangram/build/vignette.rds |binary tangram-0.3.2/tangram/inst/doc/example.R | 6 tangram-0.3.2/tangram/inst/doc/example.Rmd | 6 tangram-0.3.2/tangram/inst/doc/example.html | 184 ++---------- tangram-0.3.2/tangram/inst/doc/fda-example.R |only tangram-0.3.2/tangram/inst/doc/fda-example.Rmd |only tangram-0.3.2/tangram/inst/doc/fda-example.html |only tangram-0.3.2/tangram/inst/doc/single-style.R | 7 tangram-0.3.2/tangram/inst/doc/single-style.Rmd | 8 tangram-0.3.2/tangram/inst/doc/single-style.html | 37 ++ tangram-0.3.2/tangram/inst/doc/summary-example.R |only tangram-0.3.2/tangram/inst/doc/summary-example.Rmd |only tangram-0.3.2/tangram/inst/doc/summary-example.html |only tangram-0.3.2/tangram/man/cell.htest.Rd | 5 tangram-0.3.2/tangram/man/cell_iqr.Rd | 7 tangram-0.3.2/tangram/man/hmisc_data_type.Rd | 2 tangram-0.3.2/tangram/man/hmisc_style.Rd | 4 tangram-0.3.2/tangram/man/latex.Rd |only tangram-0.3.2/tangram/man/pbc.Rd | 2 tangram-0.3.2/tangram/man/print.Rd |only tangram-0.3.2/tangram/man/rtf.Rd |only tangram-0.3.2/tangram/man/rtf.cell.Rd |only tangram-0.3.2/tangram/man/rtf.cell_fstat.Rd |only tangram-0.3.2/tangram/man/rtf.cell_header.Rd |only tangram-0.3.2/tangram/man/rtf.cell_iqr.Rd |only tangram-0.3.2/tangram/man/rtf.cell_label.Rd |only tangram-0.3.2/tangram/man/rtf.cell_n.Rd |only tangram-0.3.2/tangram/man/rtf.cell_subheader.Rd |only tangram-0.3.2/tangram/man/rtf.default.Rd |only tangram-0.3.2/tangram/man/rtf.tangram.Rd |only tangram-0.3.2/tangram/man/summarize_chisq.Rd | 11 tangram-0.3.2/tangram/man/summarize_kruskal_horz.Rd | 13 tangram-0.3.2/tangram/man/summarize_kruskal_vert.Rd | 6 tangram-0.3.2/tangram/man/summarize_spearman.Rd | 6 tangram-0.3.2/tangram/man/summary.Rd | 21 - tangram-0.3.2/tangram/man/tangram.Rd | 6 tangram-0.3.2/tangram/tests/testthat/testLatexify.R |only tangram-0.3.2/tangram/tests/testthat/testTableBuilder.R | 10 tangram-0.3.2/tangram/vignettes/example.Rmd | 6 tangram-0.3.2/tangram/vignettes/fda-example.Rmd | 238 ++++++++++++++-- tangram-0.3.2/tangram/vignettes/single-style.Rmd | 8 tangram-0.3.2/tangram/vignettes/summary-example.Rmd |only tangram-0.3/tangram/R/compile-hmisc.R |only tangram-0.3/tangram/R/dplr-latexify.R |only tangram-0.3/tangram/man/print.cell.Rd |only tangram-0.3/tangram/man/summarize_chisq_single.Rd |only 61 files changed, 890 insertions(+), 386 deletions(-)
Title: Identify and Visualize Significantly Responsive Branches in a
Phylogenetic Tree
Description: Provides tools to identify and visualize branches in a phylogenetic tree that are significantly responsive to some intervention, taking as primary inputs a phylogenetic tree (of class phylo) and a data frame (or matrix) of corresponding tip (OTU) labels and p-values.
Author: John R. Stevens and Todd R. Jones
Maintainer: John R. Stevens <john.r.stevens@usu.edu>
Diff between SigTree versions 1.10.5 dated 2017-02-07 and 1.10.6 dated 2017-10-02
DESCRIPTION | 8 +++---- MD5 | 38 +++++++++++++++++------------------ NAMESPACE | 5 ++-- NEWS | 15 +++++++++++++ R/SigTree.other.R | 33 ++++++++++++++---------------- R/export.figtree.R | 4 ++- build/vignette.rds |binary inst/CITATION | 6 ++--- inst/doc/SigTree.R | 34 +++++++++++++++---------------- inst/doc/SigTree.Rnw | 7 +++--- inst/doc/SigTree.pdf |binary man/SigTree-package.Rd | 6 ++--- man/SigTree.other.Rd | 7 +++++- man/adonis.tree.Rd | 2 - man/export.figtree.Rd | 4 +-- man/export.inherit.Rd | 2 - man/p2.p1.Rd | 2 - man/plotSigTree.Rd | 2 - src/SigTree.c | 53 ++++++++++++++++++++++++++++++++++++++++++------- vignettes/SigTree.Rnw | 7 +++--- 20 files changed, 149 insertions(+), 86 deletions(-)
Title: Interface to 'typeform' Results
Description: An R interface to the 'typeform' <https://typeform.com> application program interface.
Also provides functions for downloading your results.
Author: Colin Gillespie [aut, cre]
Maintainer: Colin Gillespie <csgillespie@gmail.com>
Diff between rtypeform versions 0.3.1 dated 2017-07-25 and 0.3.2 dated 2017-10-02
DESCRIPTION | 8 +- MD5 | 18 +++--- NAMESPACE | 4 + NEWS.md | 4 + R/check_api_response.R | 4 - R/get_all_typeforms.R | 2 R/get_results.R | 111 ++++++++++++++++++++++++------------- R/print.R | 13 ++-- tests/testthat/test_api_response.R |only tests/testthat/test_get_results.R | 1 tests/testthat/test_print.R |only 11 files changed, 108 insertions(+), 57 deletions(-)
Title: New Zealand Election Data
Description: Convenient access to New Zealand election
results by voting place. Voting places have been matched to Regional Council,
Territorial Authority, and Area Unit, to facilitate matching with additional data.
Opinion polls since 2002 and some convenience analytical function are also supplied.
Author: Peter Ellis [aut, cre]
Maintainer: Peter Ellis <peter.ellis2013nz@gmail.com>
Diff between nzelect versions 0.3.3 dated 2017-03-28 and 0.4.0 dated 2017-10-02
DESCRIPTION | 6 MD5 | 42 ++-- NEWS |only R/misc_doc.R | 81 ++++++++ R/weights_and_seats.R | 8 build/vignette.rds |binary data/GE2014.rda |binary data/Locations2014.rda |binary data/datalist |only data/nzge.rda |only data/polls.rda |binary data/voting_places.rda |only inst/doc/README.R | 91 ++++----- inst/doc/README.Rmd | 108 +++++------ inst/doc/README.html | 256 ++++++++++++++------------- man/GE2014.Rd | 2 man/Locations2014.Rd | 2 man/nzge.Rd |only man/voting_places.Rd |only man/weight_polls.Rd | 4 tests/testthat/polls_plausibility.R | 2 tests/testthat/rotorua2014.R | 16 - tests/testthat/seat_allocations.R | 2 tests/testthat/test_totals_v_published2014.R | 46 ++-- vignettes/README.Rmd | 108 +++++------ 25 files changed, 447 insertions(+), 327 deletions(-)
Title: Random Partition Distribution Indexed by Pairwise Information
Description: Implementations are provided for the models described in the paper D. B. Dahl, R. Day, J. Tsai (2017) <DOI:10.1080/01621459.2016.1165103>. The Ewens, Ewens-Pitman, Ewens attraction, Ewens-Pitman attraction, and ddCRP distributions are available for prior and posterior simulation. Posterior simulation is based on a user-supplied likelihood. Supporting functions for partition estimation and plotting are also provided.
Author: David B. Dahl [aut, cre]
Maintainer: David B. Dahl <dahl@stat.byu.edu>
Diff between shallot versions 0.4.1 dated 2017-08-25 and 0.4.3 dated 2017-10-02
DESCRIPTION | 12 ++++---- MD5 | 20 +++++++------- NAMESPACE | 2 - NEWS | 6 ++++ R/onLoad.R | 10 +++---- R/shallot.R | 52 ++++++++++++++++++++++--------------- inst/java/scala-2.10/shallot.jar |binary inst/java/scala-2.11/shallot.jar |binary inst/java/scala-2.12/shallot.jar |binary java/shallot-sources.jar |binary man/sample.partitions.posterior.Rd | 2 - 11 files changed, 60 insertions(+), 44 deletions(-)
Title: Efficient Breeding by Genomic Mating
Description: Implements the genomic mating approach in the recently published article: Akdemir, D., & Sanchez, J. I. (2016). Efficient Breeding by Genomic Mating. Frontiers in Genetics, 7. <DOI:10.3389/fgene.2016.00210>.
Author: Deniz Akdemir
Maintainer: Deniz Akdemir <deniz.akdemir.work@gmail.com>
Diff between GenomicMating versions 1.2 dated 2017-05-23 and 1.3 dated 2017-10-02
GenomicMating-1.2/GenomicMating/src/registerDynamicSymbol.c |only GenomicMating-1.3/GenomicMating/DESCRIPTION | 10 GenomicMating-1.3/GenomicMating/MD5 | 22 - GenomicMating-1.3/GenomicMating/NAMESPACE | 2 GenomicMating-1.3/GenomicMating/R/MatingPrograms.R | 193 +++++++++- GenomicMating-1.3/GenomicMating/R/RcppExports.R | 12 GenomicMating-1.3/GenomicMating/build/partial.rdb |binary GenomicMating-1.3/GenomicMating/man/Amatinpieces.rd | 2 GenomicMating-1.3/GenomicMating/man/GenomicMating-package.Rd | 5 GenomicMating-1.3/GenomicMating/man/getGaSolutions.rd | 17 GenomicMating-1.3/GenomicMating/man/getGaSolutionsFrontier.Rd |only GenomicMating-1.3/GenomicMating/src/MatingPrograms.cpp | 9 GenomicMating-1.3/GenomicMating/src/RcppExports.cpp | 31 + 13 files changed, 246 insertions(+), 57 deletions(-)
Title: Test Against Parametric Regression Function
Description: Performs hypothesis tests concerning a regression function in a least-squares model, where the null is a parametric function, and the alternative is the union of large-dimensional convex polyhedral cones. See Bodhisattva Sen and Mary C Meyer (2016) <doi:10.1111/rssb.12178> for more details.
Author: Mary C Meyer, Bodhisattva Sen
Maintainer: Mary C Meyer <meyer@stat.colostate.edu>
Diff between DoubleCone versions 1.0 dated 2013-11-22 and 1.1 dated 2017-10-02
DESCRIPTION | 15 ++++++++------- MD5 | 8 ++++---- R/agconst.R | 8 ++++---- R/doubconetest.R | 8 ++++---- R/partlintest.R | 8 ++++---- 5 files changed, 24 insertions(+), 23 deletions(-)
Title: Partial Linear Least-Squares Regression using Constrained
Splines
Description: Given response y, continuous predictor x, and covariate matrix, the relationship between E(y) and x is estimated with a shape constrained regression spline. Function outputs fits and various types of inference.
Author: Mary C Meyer
Maintainer: Mary C Meyer <meyer@stat.colostate.edu>
Diff between ConSpline versions 1.1 dated 2015-08-29 and 1.2 dated 2017-10-02
DESCRIPTION | 10 +++++----- MD5 | 4 ++-- R/conspline.R | 4 ++-- 3 files changed, 9 insertions(+), 9 deletions(-)
Title: Covariate Balancing Propensity Score
Description: Implements the covariate balancing propensity score (CBPS) proposed
by Imai and Ratkovic (2014) <DOI:10.1111/rssb.12027>. The propensity score is
estimated such that it maximizes the resulting covariate balance as well as the
prediction of treatment assignment. The method, therefore, avoids an iteration
between model fitting and balance checking. The package also implements several
extensions of the CBPS beyond the cross-sectional, binary treatment setting.
The current version implements the CBPS for longitudinal settings so that it can
be used in conjunction with marginal structural models from Imai and Ratkovic
(2015) <DOI:10.1080/01621459.2014.956872>, treatments with three- and four-
valued treatment variables, continuous-valued treatments from Fong, Hazlett,
and Imai (2015) <http://imai.princeton.edu/research/files/CBGPS.pdf>, and the
situation with multiple distinct binary treatments administered simultaneously.
In the future it will be extended to other settings including the generalization
of experimental and instrumental variable estimates. Recently we have added the
optimal CBPS which chooses the optimal balancing function and results in doubly
robust and efficient estimator for the treatment effect as well as high dimensional
CBPS when a large number of covariates exist.
Author: Christian Fong [aut, cre],
Marc Ratkovic [aut],
Kosuke Imai [aut],
Chad Hazlett [ctb],
Xiaolin Yang [ctb],
Sida Peng [ctb]
Maintainer: Christian Fong <christianfong@stanford.edu>
Diff between CBPS versions 0.13 dated 2016-12-29 and 0.14 dated 2017-10-02
CBPS-0.13/CBPS/README.md |only CBPS-0.14/CBPS/ChangeLog | 3 CBPS-0.14/CBPS/DESCRIPTION | 38 +- CBPS-0.14/CBPS/MD5 | 24 - CBPS-0.14/CBPS/NAMESPACE | 9 CBPS-0.14/CBPS/R/CBIV.R | 685 ++++++++++++++++++++----------------- CBPS-0.14/CBPS/R/CBPSBinary.R | 194 ++++++---- CBPS-0.14/CBPS/R/CBPSContinuous.r | 116 +++--- CBPS-0.14/CBPS/R/CBPSMain.R | 21 - CBPS-0.14/CBPS/R/CBPSMultiTreat.r | 282 +++++++-------- CBPS-0.14/CBPS/R/analytic_vcov.R |only CBPS-0.14/CBPS/R/hdCBPS.R |only CBPS-0.14/CBPS/man/CBIV.Rd |only CBPS-0.14/CBPS/man/CBPS.Rd | 31 + CBPS-0.14/CBPS/man/hdCBPS.Rd |only CBPS-0.14/CBPS/man/vcov_outcome.Rd |only 16 files changed, 775 insertions(+), 628 deletions(-)
Title: Cubature over Polygonal Domains
Description: The following methods for cubature (numerical integration)
over polygonal domains are currently implemented:
the two-dimensional midpoint rule as a simple wrapper around
as.im.function() from package 'spatstat' (Baddeley and Turner, 2005),
the product Gauss cubature by Sommariva and Vianello (2007),
an adaptive cubature for isotropic functions via line integrate()
along the boundary (Meyer and Held, 2014),
and quasi-exact methods specific to the integration of the
bivariate Gaussian density over polygonal and circular domains
(based on formulae from the Abramowitz and Stegun (1972) handbook).
For cubature over simple hypercubes, the packages 'cubature' and
'R2Cuba' are more appropriate.
Author: Sebastian Meyer [aut, cre, trl],
Leonhard Held [ths],
Michael Hoehle [ths]
Maintainer: Sebastian Meyer <seb.meyer@fau.de>
Diff between polyCub versions 0.6.0 dated 2017-05-26 and 0.6.1 dated 2017-10-02
DESCRIPTION | 14 +++---- MD5 | 76 +++++++++++++++++++------------------- NAMESPACE | 18 ++------- R/circleCub.R | 15 +++---- R/coerce-gpc-methods.R | 51 +++++++++++-------------- R/coerce-sp-methods.R | 40 +++++++++----------- R/plotpolyf.R | 15 +++---- R/polyCub.R | 11 +++-- R/polyCub.SV.R | 42 ++++++++++----------- R/polyCub.exact.Gauss.R | 44 +++++++++++----------- R/polyCub.iso.R | 6 +-- R/polyCub.midpoint.R | 24 ++++++------ R/tools.R | 23 +++++------ R/xylist.R | 20 +++++----- R/zzz.R | 19 ++++----- README.md | 41 ++++++++++++++------ inst/NEWS.Rd | 20 ++++++++++ inst/examples/plotpolyf.R | 19 ++++++--- inst/examples/polyCub.R | 20 +++++----- inst/examples/polyCub.iso.R | 19 +++++---- inst/include/polyCubAPI.h | 2 - man/circleCub.Gauss.Rd | 2 - man/coerce-gpc-methods.Rd | 8 ++-- man/coerce-sp-methods.Rd | 16 ++++---- man/plotpolyf.Rd | 23 +++++++---- man/polyCub-package.Rd | 8 ++-- man/polyCub.Rd | 20 +++++----- man/polyCub.SV.Rd | 8 ++-- man/polyCub.exact.Gauss.Rd | 17 ++++---- man/polyCub.iso.Rd | 23 ++++++----- man/polygauss.Rd | 8 ++-- man/xylist.Rd | 2 - src/init.c | 2 - src/polyCub.SV.c | 2 - src/polyCub.SV.h | 2 - src/polyCub.iso.c | 11 +++-- src/polyCub.iso.h | 2 - tests/testthat/polyiso_powerlaw.c | 2 - tests/testthat/test-regression.R | 12 +++--- 39 files changed, 375 insertions(+), 332 deletions(-)
Title: Loading Google Adwords Data into R
Description: Aims at loading Google Adwords data into R. Adwords is an online
advertising service that enables advertisers to display advertising copy to web
users (see <https://developers.google.com/adwords/> for more information).
Therefore the package implements three main features. First, the package
provides an authentication process for R with the Google Adwords API (see
<https://developers.google.com/adwords/api/> for more information) via OAUTH2.
Second, the package offers an interface to apply the Adwords query language in
R and query the Adwords API with ad-hoc reports. Third, the received data are
transformed into suitable data formats for further data processing and data
analysis.
Author: Johannes Burkhardt <johannes.burkhardt@gmail.com>, Matthias Bannert
<matthias.bannert@gmail.com>
Maintainer: Johannes Burkhardt <johannes.burkhardt@gmail.com>
Diff between RAdwords versions 0.1.13 dated 2017-08-31 and 0.1.14 dated 2017-10-02
DESCRIPTION | 6 +++--- LICENSE | 2 +- MD5 | 8 ++++---- NEWS | 7 +++++++ R/getData.R | 4 ++-- 5 files changed, 17 insertions(+), 10 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-08-04 0.0.2
2017-07-14 0.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2013-01-24 1.0.0
Title: Update and Manipulate Rd Documentation Objects
Description: Functions for manipulation of Rd objects, including
function reprompt() for updating existing Rd
documentation for functions, methods and classes and
function rebib() for import of references from 'bibtex'
files. There is also a macro for importing 'bibtex'
references which can be used in Rd files and 'roxygen2'
comments.
Author: Georgi N. Boshnakov
Maintainer: Georgi N. Boshnakov <georgi.boshnakov@manchester.ac.uk>
Diff between Rdpack versions 0.4-21 dated 2017-08-06 and 0.4-22 dated 2017-10-02
Rdpack-0.4-21/Rdpack/inst/auto |only Rdpack-0.4-21/Rdpack/vignettes/Inserting_bibtex_references.tex |only Rdpack-0.4-22/Rdpack/DESCRIPTION | 12 Rdpack-0.4-22/Rdpack/MD5 | 21 Rdpack-0.4-22/Rdpack/NEWS | 242 +++++----- Rdpack-0.4-22/Rdpack/README.md |only Rdpack-0.4-22/Rdpack/build/partial.rdb |binary Rdpack-0.4-22/Rdpack/build/vignette.rds |binary Rdpack-0.4-22/Rdpack/inst/doc/Inserting_bibtex_references.Rnw | 2 Rdpack-0.4-22/Rdpack/inst/doc/Inserting_bibtex_references.pdf |binary Rdpack-0.4-22/Rdpack/man/insert_ref.Rd | 79 +-- Rdpack-0.4-22/Rdpack/vignettes/Inserting_bibtex_references.Rnw | 2 Rdpack-0.4-22/Rdpack/vignettes/auto/Inserting_bibtex_references.el | 12 13 files changed, 199 insertions(+), 171 deletions(-)
Title: Joint Modeling of Longitudinal and Time-to-Event Data under a
Bayesian Approach
Description: Shared parameter models for the joint modeling of longitudinal and time-to-event data using MCMC; Dimitris Rizopoulos (2016) <doi:10.18637/jss.v072.i07>.
Author: Dimitris Rizopoulos <d.rizopoulos@erasmusmc.nl>
Maintainer: Dimitris Rizopoulos <d.rizopoulos@erasmusmc.nl>
Diff between JMbayes versions 0.8-67 dated 2017-09-25 and 0.8-68 dated 2017-10-02
DESCRIPTION | 8 ++++---- MD5 | 18 ++++++++++-------- R/print.aucJM.R | 2 +- R/print.prederrJM.R | 2 +- R/survfitJM.mvJMbayes.R | 29 +++++++++++++++++------------ README.md |only inst/NEWS | 6 ++++++ inst/doc/Dynamic_Predictions.html |only inst/shiny_app_JM/server.R | 38 ++++++++++++++++++++------------------ man/JMbayes.Rd | 4 ++-- man/plot-survfitJM.Rd | 10 ++++++++-- 11 files changed, 69 insertions(+), 48 deletions(-)
Title: A Shiny GUI for Smith's Mean Measure of Divergence (MMD)
Description: Offers a Shiny user interface for the calculation of the Mean Measure of Divergence, with facilities for trait selection and graphical representations.
Author: Frederic Santos
Maintainer: Frederic Santos <frederic.santos@u-bordeaux.fr>
Diff between AnthropMMD versions 2.2.1 dated 2017-09-11 and 2.2.2 dated 2017-10-02
DESCRIPTION | 9 +++++---- MD5 | 8 ++++---- inst/CITATION | 9 ++++++++- man/AnthropMMD-package.Rd | 16 ++++++++-------- man/StartMMD.Rd | 36 +++++++++++++++++------------------- 5 files changed, 42 insertions(+), 36 deletions(-)
Title: Multi-Model Inference
Description: Model selection and model averaging based on information criteria
(AICc and alike).
Author: Kamil Bartoń
Maintainer: Kamil Bartoń <kamil.barton@go2.pl>
Diff between MuMIn versions 1.15.6 dated 2016-01-07 and 1.40.0 dated 2017-10-02
MuMIn-1.15.6/MuMIn/tests/r_squared_glmm.R |only MuMIn-1.40.0/MuMIn/DESCRIPTION | 18 MuMIn-1.40.0/MuMIn/MD5 | 137 +- MuMIn-1.40.0/MuMIn/NAMESPACE | 37 MuMIn-1.40.0/MuMIn/NEWS | 341 +++-- MuMIn-1.40.0/MuMIn/R/Cp.R | 46 MuMIn-1.40.0/MuMIn/R/DIC.R | 78 - MuMIn-1.40.0/MuMIn/R/ICOMP.R | 138 +- MuMIn-1.40.0/MuMIn/R/Weights.R | 145 +- MuMIn-1.40.0/MuMIn/R/arm.glm.R | 377 +++--- MuMIn-1.40.0/MuMIn/R/dredge.R | 25 MuMIn-1.40.0/MuMIn/R/ext-gamm.R | 88 - MuMIn-1.40.0/MuMIn/R/ext-mark.R | 96 - MuMIn-1.40.0/MuMIn/R/ext.R | 446 +++---- MuMIn-1.40.0/MuMIn/R/formulas.R | 224 +-- MuMIn-1.40.0/MuMIn/R/get.models.R | 17 MuMIn-1.40.0/MuMIn/R/getAllTerms.R | 94 - MuMIn-1.40.0/MuMIn/R/getModelArgs.R |only MuMIn-1.40.0/MuMIn/R/glm_fit.R |only MuMIn-1.40.0/MuMIn/R/importance.R | 77 - MuMIn-1.40.0/MuMIn/R/init.R | 48 MuMIn-1.40.0/MuMIn/R/is.R | 32 MuMIn-1.40.0/MuMIn/R/loo.R |only MuMIn-1.40.0/MuMIn/R/makeArgs.R | 500 +++----- MuMIn-1.40.0/MuMIn/R/methods-logLik.R | 354 ++--- MuMIn-1.40.0/MuMIn/R/methods-nobs.R | 210 +-- MuMIn-1.40.0/MuMIn/R/methods-predict.R | 318 ++--- MuMIn-1.40.0/MuMIn/R/methods-unmarkedFit.R |only MuMIn-1.40.0/MuMIn/R/model.avg.R | 1332 ++++++++++----------- MuMIn-1.40.0/MuMIn/R/model.sel.R | 414 +++--- MuMIn-1.40.0/MuMIn/R/model.selection.R | 470 +++---- MuMIn-1.40.0/MuMIn/R/modify.model.selection.R | 345 ++--- MuMIn-1.40.0/MuMIn/R/nested.R | 138 +- MuMIn-1.40.0/MuMIn/R/pdredge.R | 1422 +++++++++++------------ MuMIn-1.40.0/MuMIn/R/plots.R | 142 +- MuMIn-1.40.0/MuMIn/R/predict.R | 280 ++-- MuMIn-1.40.0/MuMIn/R/quasiLik.R | 316 ++--- MuMIn-1.40.0/MuMIn/R/r.squaredGLMM.R | 332 ++--- MuMIn-1.40.0/MuMIn/R/r.squaredLR.R | 286 ++-- MuMIn-1.40.0/MuMIn/R/rbind.model.selection.R | 184 +- MuMIn-1.40.0/MuMIn/R/simulateData.R |only MuMIn-1.40.0/MuMIn/R/stdize.R | 508 ++++---- MuMIn-1.40.0/MuMIn/R/substitution.R | 264 ++-- MuMIn-1.40.0/MuMIn/R/termdeps.R | 194 +-- MuMIn-1.40.0/MuMIn/R/umf_specs.R |only MuMIn-1.40.0/MuMIn/R/updateable.R | 136 +- MuMIn-1.40.0/MuMIn/R/utils-debug.R |only MuMIn-1.40.0/MuMIn/R/utils-misc.R | 580 ++++----- MuMIn-1.40.0/MuMIn/R/utils-models.R | 1152 +++++++++--------- MuMIn-1.40.0/MuMIn/R/weights-bg.R |only MuMIn-1.40.0/MuMIn/R/weights-boot.R |only MuMIn-1.40.0/MuMIn/R/weights-cos2.R |only MuMIn-1.40.0/MuMIn/R/weights-jackknife.R |only MuMIn-1.40.0/MuMIn/R/weights-stacking.R |only MuMIn-1.40.0/MuMIn/R/xtable-methods.R | 106 - MuMIn-1.40.0/MuMIn/data/Beetle.rda |binary MuMIn-1.40.0/MuMIn/data/Cement.rda |binary MuMIn-1.40.0/MuMIn/data/GPA.rda |binary MuMIn-1.40.0/MuMIn/inst/TODO | 3 MuMIn-1.40.0/MuMIn/man/BGweights.Rd |only MuMIn-1.40.0/MuMIn/man/MuMIn-package.Rd | 18 MuMIn-1.40.0/MuMIn/man/QAIC.Rd | 12 MuMIn-1.40.0/MuMIn/man/Weights.Rd | 54 MuMIn-1.40.0/MuMIn/man/arm.glm.Rd | 45 MuMIn-1.40.0/MuMIn/man/bootWeights.Rd |only MuMIn-1.40.0/MuMIn/man/cos2weights.Rd |only MuMIn-1.40.0/MuMIn/man/data-Beetle.Rd | 238 +-- MuMIn-1.40.0/MuMIn/man/dredge.Rd | 15 MuMIn-1.40.0/MuMIn/man/get.models.Rd | 16 MuMIn-1.40.0/MuMIn/man/jackknifeWeights.Rd |only MuMIn-1.40.0/MuMIn/man/loo.Rd |only MuMIn-1.40.0/MuMIn/man/model-utils.Rd | 23 MuMIn-1.40.0/MuMIn/man/model.selection.object.Rd | 122 - MuMIn-1.40.0/MuMIn/man/r.squaredGLMM.Rd | 2 MuMIn-1.40.0/MuMIn/man/stackingWeights.Rd |only MuMIn-1.40.0/MuMIn/man/subset.model.selection.Rd | 4 MuMIn-1.40.0/MuMIn/man/supported-classes.Rd | 2 MuMIn-1.40.0/MuMIn/man/updateable.Rd | 4 MuMIn-1.40.0/MuMIn/tests/unmarked.R | 4 79 files changed, 6660 insertions(+), 6349 deletions(-)
Title: Time Series Cointegrated System
Description: A set of functions to implement Time Series Cointegrated System (TSCS)
spatial interpolation and relevant data visualization.
Author: Tianjian Yang [aut, cre]
Maintainer: Tianjian Yang <yangtj5@mail2.sysu.edu.cn>
Diff between TSCS versions 0.1.0 dated 2017-06-06 and 0.1.1 dated 2017-10-02
DESCRIPTION | 14 ++++++----- MD5 | 58 +++++++++++++++++++++++++----------------------- NAMESPACE | 7 +++-- R/appraisal_index.R | 2 - R/namespace.R | 19 ++++++++------- R/plot3D_NA.R | 2 - R/plot3D_dif.R | 2 - R/plot3D_map.R | 10 ++++---- R/plot_NA.R | 2 - R/plot_compare.R | 2 - R/plot_dif.R | 2 - R/plot_map.R | 2 - R/tscsEstimate.R | 2 - R/tscsEstimate3D.R | 2 - R/tscsRegression.R | 4 +-- R/tscsRegression3D.R | 4 +-- build |only inst |only man/appraisal_index.Rd | 2 - man/plot3D_NA.Rd | 2 - man/plot3D_dif.Rd | 2 - man/plot3D_map.Rd | 2 - man/plot_NA.Rd | 2 - man/plot_compare.Rd | 2 - man/plot_dif.Rd | 2 - man/plot_map.Rd | 2 - man/tscsEstimate.Rd | 2 - man/tscsEstimate3D.Rd | 2 - man/tscsRegression.Rd | 2 - man/tscsRegression3D.Rd | 2 - vignettes |only 31 files changed, 83 insertions(+), 75 deletions(-)
More information about EnergyOnlineCPM at CRAN
Permanent link
Title: Additive Data Envelopment Analysis Models
Description: Provides functions for calculating efficiency with two types of additive Data Envelopment Analysis models: (i) Generalized Efficiency Measures: unweighted additive model (Cooper et al., 2007 <doi:10.1007/978-0-387-45283-8>), Range Adjusted Measure (Cooper et al., 1999, <doi:10.1023/A:1007701304281>), Bounded Adjusted Measure (Cooper et al., 2011 <doi:10.1007/s11123-010-0190-2>), Measure of Inefficiency Proportions (Cooper et al., 1999 <doi:10.1023/A:1007701304281>), and the Lovell-Pastor Measure (Lovell and Pastor, 1995 <doi:10.1016/0167-6377(95)00044-5>); and (ii) the Slacks-Based Measure (Tone, 2001 <doi:10.1016/S0377-2217(99)00407-5>). The functions provide several options: (i) constant and variable returns to scale; (ii) fixed (non-controllable) inputs and/or outputs; (iii) bounding the slacks so that unrealistically large slack values are avoided; and (iv) calculating the efficiency of specific Decision-Making Units (DMUs), rather than of the whole sample. Package additiveDEA also provides a function for reducing computation time when datasets are large.
Author: Andreas Diomedes Soteriades
Maintainer: Andreas Diomedes Soteriades <andreassot10@yahoo.com>
Diff between additiveDEA versions 1.0 dated 2017-08-01 and 1.1 dated 2017-10-02
additiveDEA-1.0/additiveDEA/build |only additiveDEA-1.0/additiveDEA/man/additiveDEA-package.Rd |only additiveDEA-1.1/additiveDEA/DESCRIPTION | 8 additiveDEA-1.1/additiveDEA/MD5 | 16 additiveDEA-1.1/additiveDEA/R/dea.fast.R | 162 +++++++-- additiveDEA-1.1/additiveDEA/R/dea.gem.R | 275 ++++++++++------ additiveDEA-1.1/additiveDEA/R/dea.sbm.R | 282 ++++++++++------- additiveDEA-1.1/additiveDEA/man/dea.fast.Rd | 143 ++++++-- additiveDEA-1.1/additiveDEA/man/dea.gem.Rd | 82 +++- additiveDEA-1.1/additiveDEA/man/dea.sbm.Rd | 104 ++++-- 10 files changed, 712 insertions(+), 360 deletions(-)
Title: Find Free Versions of Scholarly Publications via the oaDOI
Service
Description: This web client interfaces oaDOI <https://oadoi.org>, a service finding
free full-texts of academic papers by linking DOIs with open access journals and
repositories. It provides unified access to various data sources for open access
full-text links including Crossref, Bielefeld Academic Search Engine (BASE) and
the Directory of Open Access Journals (DOAJ). API usage is free and no
registration is required.
Author: Najko Jahn [aut, cre],
Tuija Sonkkila [ctb] (Tuija Sonkkila reviewed the package for rOpenSci,
see https://github.com/ropensci/onboarding/issues/115),
Ross Mounce [ctb] (Ross Mounce reviewed the package for rOpenSci, see
https://github.com/ropensci/onboarding/issues/115)
Maintainer: Najko Jahn <najko.jahn@gmail.com>
Diff between roadoi versions 0.3 dated 2017-07-17 and 0.4 dated 2017-10-02
DESCRIPTION | 11 MD5 | 30 +- NAMESPACE | 5 NEWS | 4 R/oadoiAddins.R | 5 R/oadoi_fetch.r | 164 +++++++------ R/roadoi-package.r | 8 R/utils.r | 4 README.md | 379 ++++++++++++++---------------- inst/doc/intro.R | 39 ++- inst/doc/intro.Rmd | 124 ++++++--- inst/doc/intro.html | 477 ++++++++++++++++++++------------------ man/oadoi_fetch.Rd | 110 ++++---- man/roadoi-package.Rd | 5 tests/testthat/test_oadoi_fetch.r | 6 vignettes/intro.Rmd | 124 ++++++--- 16 files changed, 815 insertions(+), 680 deletions(-)
Title: Evaluation of Credit Risk with Structural and Reduced Form
Models
Description: Evaluation of default probability of sovereign and corporate entities based on structural or intensity based models and calibration on market Credit Default Swap quotes. Damiano Brigo, Massimo Morini, Andrea Pallavicini (2013): "Counterparty Credit Risk, Collateral and Funding. With Pricing Cases for All Asset Classes".
Author: Alessandro Cimarelli <alessandro.cimarelli@icloud.com> [anl, aut, cre]
Nicolò Manca <n.manca1992@gmail.com> [anl, aut, cre]
Maintainer: Alessandro Cimarelli <alessandro.cimarelli@icloud.com>
Diff between CreditRisk versions 0.1.0 dated 2017-09-12 and 0.1.1 dated 2017-10-02
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- R/calibrate.BlackCox.R | 4 ++-- R/calibrate.at1p.R | 4 ++-- R/calibrate.sbtv.R | 4 ++-- 5 files changed, 13 insertions(+), 13 deletions(-)
Title: Create Pivot Tables in R
Description: Create regular pivot tables with just a few lines of R.
More complex pivot tables can also be created, e.g. pivot tables
with irregular layouts, multiple calculations and/or derived
calculations based on multiple data frames. Pivot tables are
constructed using R only and can be written to a range of
output formats (plain text, 'HTML', 'Latex' and 'Excel'),
including with styling/formatting.
Author: Christopher Bailiss [aut, cre]
Maintainer: Christopher Bailiss <cbailiss@gmail.com>
Diff between pivottabler versions 0.3.0 dated 2017-06-01 and 0.4.0 dated 2017-10-02
DESCRIPTION | 15 +- MD5 | 135 +++++++++++++-------- NAMESPACE | 2 NEWS.md | 25 +++ R/PivotCells.R | 8 - R/PivotOpenXlsxRenderer.R |only R/PivotOpenXlsxStyle.R |only R/PivotOpenXlsxStyles.R |only R/PivotStyle.R | 11 - R/PivotTable.R | 42 ++++++ R/PivotThemes.R | 68 +++++++--- R/checkArgument.R | 6 R/quickPivot.R | 66 +++++++++- R/styleParsing.R |only R/utilities.R |only README.md | 2 build/vignette.rds |binary inst/doc/v01-introduction.R | 6 inst/doc/v01-introduction.Rmd | 32 ++++- inst/doc/v01-introduction.html | 127 +++++++++++--------- inst/doc/v02-datagroups.Rmd | 1 inst/doc/v02-datagroups.html | 63 +++++----- inst/doc/v03-calculations.Rmd | 1 inst/doc/v03-calculations.html | 75 ++++++----- inst/doc/v04-outputs.Rmd | 7 + inst/doc/v04-outputs.html | 27 ++-- inst/doc/v05-latexoutput.Rmd | 1 inst/doc/v05-latexoutput.html | 11 - inst/doc/v06-styling.R | 54 ++++---- inst/doc/v06-styling.Rmd | 64 ++++++---- inst/doc/v06-styling.html | 109 +++++++++-------- inst/doc/v07-findingandformatting.R | 67 +++++----- inst/doc/v07-findingandformatting.Rmd | 72 ++++++----- inst/doc/v07-findingandformatting.html | 207 ++++++++++++++++----------------- inst/doc/v08-cellcontext.Rmd | 1 inst/doc/v08-cellcontext.html | 27 ++-- inst/doc/v09-irregularlayout.Rmd | 1 inst/doc/v09-irregularlayout.html | 59 ++++----- inst/doc/v10-performance.Rmd | 1 inst/doc/v10-performance.html | 51 ++++---- inst/doc/v11-shiny.Rmd | 2 inst/doc/v11-shiny.html | 6 inst/doc/v12-excelexport.R |only inst/doc/v12-excelexport.Rmd |only inst/doc/v12-excelexport.html |only man/PivotOpenXlsxRenderer.Rd |only man/PivotOpenXlsxStyle.Rd |only man/PivotOpenXlsxStyles.Rd |only man/PivotTable.Rd | 11 + man/cleanCssValue.Rd |only man/containsText.Rd |only man/getNextPosition.Rd |only man/getXlBorderFromCssBorder.Rd |only man/getXlBorderStyleFromCssBorder.Rd |only man/isNumericValue.Rd |only man/isTextValue.Rd |only man/parseColor.Rd |only man/parseCssBorder.Rd |only man/parseCssSizeToPt.Rd |only man/parseCssSizeToPx.Rd |only man/parseCssString.Rd |only man/parseXlBorder.Rd |only man/qhpvt.Rd | 8 + man/qlpvt.Rd | 2 man/qpvt.Rd | 2 tests/testthat/testGeneral.R | 87 +++++++++++++ vignettes/excel1.png |only vignettes/excel2.png |only vignettes/excel3.png |only vignettes/excel4.png |only vignettes/excel5.png |only vignettes/excel6.png |only vignettes/v01-introduction.Rmd | 32 ++++- vignettes/v02-datagroups.Rmd | 1 vignettes/v03-calculations.Rmd | 1 vignettes/v04-outputs.Rmd | 7 + vignettes/v05-latexoutput.Rmd | 1 vignettes/v06-styling.Rmd | 64 ++++++---- vignettes/v07-findingandformatting.Rmd | 72 ++++++----- vignettes/v08-cellcontext.Rmd | 1 vignettes/v09-irregularlayout.Rmd | 1 vignettes/v10-performance.Rmd | 1 vignettes/v11-shiny.Rmd | 2 vignettes/v12-excelexport.Rmd |only 84 files changed, 1096 insertions(+), 649 deletions(-)
Title: Provides the Standard Distribution Functions for the Triangle
Distribution
Description: Provides the "r, q, p, and d" distribution functions for the triangle distribution.
Author: Rob Carnell
Maintainer: Rob Carnell <bertcarnell@gmail.com>
Diff between triangle versions 0.10 dated 2016-01-21 and 0.11 dated 2017-10-02
ChangeLog | 4 ++++ DESCRIPTION | 13 ++++++++----- MD5 | 10 +++++----- R/dtriangle.R | 45 +++++++++++++++++++++++++++++++-------------- R/ptriangle.r | 2 +- R/qtriangle.R | 3 +++ 6 files changed, 52 insertions(+), 25 deletions(-)
Title: R Bindings for 'ZeroMQ'
Description: Interface to the 'ZeroMQ' lightweight messaging kernel (see <http://www.zeromq.org/> for more information).
Author: Whit Armstrong [aut],
Jeroen Ooms [aut, cre]
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between rzmq versions 0.9.2 dated 2017-06-26 and 0.9.3 dated 2017-10-02
DESCRIPTION | 6 ++-- MD5 | 17 ++++++----- NAMESPACE | 2 + NEWS | 4 ++ R/rzmq.R | 15 ++++++++-- man/init.context.Rd | 7 ++-- man/init.message.Rd |only man/send.socket.Rd | 1 src/interface.cpp | 76 ++++++++++++++++++++++++++++++++++++++++++++++++++-- src/interface.h | 5 ++- 10 files changed, 114 insertions(+), 19 deletions(-)
Title: Tools for Management of Survey Data and for the Presentation of
Analysis Results
Description: One of the aims of this package is to make life easier for
R users who deal with survey data sets. It provides an
infrastructure for the management of survey data including
value labels, definable missing values, recoding of variables,
production of code books, and import of (subsets of) 'SPSS' and
'Stata' files. Further, it provides functionality to produce
tables and data frames of arbitrary descriptive statistics and
(almost) publication-ready tables of regression model
estimates, which can be exported to 'LaTeX' and HTML.
Author: Martin Elff (with contributions from Christopher N. Lawrence, Dave Atkins, Jason W. Morgan, Achim Zeileis)
Maintainer: Martin Elff <memisc@elff.eu>
Diff between memisc versions 0.99.14.2 dated 2017-09-08 and 0.99.14.3 dated 2017-10-02
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- inst/ChangeLog | 6 +++++- inst/doc/anes48.html | 2 +- inst/doc/mtable-html.Rmd | 2 +- inst/doc/mtable-html.html | 8 +------- src/memisc.h | 3 +++ vignettes/mtable-html.Rmd | 2 +- 8 files changed, 23 insertions(+), 22 deletions(-)
Title: Exact P-Values and Matching Confidence Intervals for Simple
Discrete Parametric Cases
Description: Calculates exact tests and confidence intervals for one-sample binomial and one- or two-sample Poisson cases.
Author: Michael P. Fay
Maintainer: Michael P. Fay <mfay@niaid.nih.gov>
Diff between exactci versions 1.3-1 dated 2015-07-02 and 1.3-3 dated 2017-10-02
ChangeLog | 6 ++ DESCRIPTION | 8 +-- MD5 | 20 ++++----- R/binom.exact.R | 9 +++- R/exactpoissonCI.R | 108 ++++++++++++++++++++++++++++++++++--------------- R/poisson.exact.R | 28 +++++++----- R/powerBinom.R | 14 +++++- build/vignette.rds |binary inst/CITATION | 2 inst/doc/exactci.pdf |binary man/exactci-package.Rd | 4 - 11 files changed, 138 insertions(+), 61 deletions(-)
Title: Constrained Generalized Additive Model
Description: A constrained generalized additive model is fitted by the cgam routine. Given a set of predictors, each of which may have a shape or order restrictions, the maximum likelihood estimator for the constrained generalized additive model is found using an iteratively re-weighted cone projection algorithm. The ShapeSelect routine chooses a subset of predictor variables and describes the component relationships with the response. For each predictor, the user needs only specify a set of possible shape or order restrictions. A model selection method chooses the shapes and orderings of the relationships as well as the variables. The cone information criterion (CIC) is used to select the best combination of variables and shapes. A genetic algorithm may be used when the set of possible models is large. In addition, the cgam routine implements a two-dimensional isotonic regression using warped-plane splines without additivity assumptions. It can also fit a convex or concave regression surface with triangle splines without additivity assumptions. See Mary C. Meyer (2013)<doi:10.1080/10485252.2013.797577> for more details.
Author: Mary C. Meyer and Xiyue Liao
Maintainer: Xiyue Liao <liaoxiyue2011@gmail.com>
Diff between cgam versions 1.7 dated 2017-07-02 and 1.8 dated 2017-10-02
ChangeLog | 6 DESCRIPTION | 14 - MD5 | 14 - NAMESPACE | 2 R/cgam.R | 724 ++++++++++++++++++++++++++++++++++++++++------------ man/Ord.Rd | 6 man/cgam.Rd | 3 man/predict.cgam.Rd | 14 - 8 files changed, 598 insertions(+), 185 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-05-19 1.5.1
2015-01-14 1.5
2014-07-30 1.3.1
2014-06-17 1.3
2014-05-14 1.2
2014-01-04 1.1
2013-04-11 1.0