Title: Split Plot
Description: Automates common plotting tasks to ease data exploration.
Makes density plots (potentially overlaid on histograms),
scatter plots with prediction lines, or bar or line plots with error bars.
For each type, y, or x and y variables can be plotted at levels of other variables,
all with minimal specification.
Author: Micah Iserman
Maintainer: Micah Iserman <micah.iserman@ttu.edu>
Diff between splot versions 0.3.0 dated 2017-09-07 and 0.3.1 dated 2017-10-03
DESCRIPTION | 6 MD5 | 12 + NAMESPACE | 5 R/splot.R | 356 ++++++++++++++++++++++++++++++++++------------------- R/utils.R |only inst |only man/splot.Rd | 103 +++++++++------ man/splot.bench.Rd |only man/splot.color.Rd |only 9 files changed, 309 insertions(+), 173 deletions(-)
Title: Generalized Correlations and Initial Causal Path
Description: Since causal paths from data are important for all sciences, the
package provides sophisticated functions. The idea is simply
that if X causes Y (path: X to Y) then non-deterministic variation in X
is more "original or independent" than similar variation in Y. We compare
two flipped kernel regressions: X=f(Y, Z) and Y=g(X,Z), where Z are control
variables. Our first two criteria compare absolute gradients (Cr1) and
absolute residuals (Cr2), both quantified by stochastic dominance of four
orders (SD1 to SD4). Our third criterion (Cr3) expects X to be better able
to predict Y than the other way around using generalized partial correlation
If |r*(x|y)|> |r*(y|x)| it suggests that y is more likely
the "kernel cause" of x. The usual partial correlations are generalized for
the asymmetric matrix of r*'s developed here.
Partial correlations help asses effect of x on y after removing the effect of a
set of variables.
The package provides additional tools for causal assessment,
for printing the causal directions in a clear, comprehensive compact summary form,
for matrix algebra, for "outlier detection", and for numerical integration by the
trapezoidal rule, stochastic dominance, etc.
The package has functions for bootstrap-based statistical inference and one
for a heuristic t-test.
Author: Prof. H. D. Vinod, Fordham University, NY.
Maintainer: H. D. Vinod <vinod@fordham.edu>
Diff between generalCorr versions 1.0.8 dated 2017-09-11 and 1.0.9 dated 2017-10-03
DESCRIPTION | 8 ++++---- MD5 | 22 +++++++++++++--------- NAMESPACE | 2 ++ NEWS | 5 ++++- R/causeSummary.R | 17 +++++++++++------ R/parcorMany.R |only R/parcor_ijk.R | 25 +++++++++++++++++-------- R/parcor_linear.R |only inst/doc/generalCorr-vignette.pdf |binary inst/doc/generalCorr-vignette2.pdf |binary man/causeSummary.Rd | 17 +++++++++++------ man/parcorMany.Rd |only man/parcor_ijk.Rd | 12 ++++++++++-- man/parcor_linear.Rd |only 14 files changed, 72 insertions(+), 36 deletions(-)
Title: Wamser Misc: Reading Files by Tokens, Stateful Computations,
Utility Functions
Description: A tokenizer to read a text file token by token with a very lightweight API, a framework for stateful computations with finite state machines and a few string utility functions.
Author: Markus S. Wamser [aut, cre]
Maintainer: Markus S. Wamser <r-wmisc@devel.wamser.eu>
Diff between Wmisc versions 0.3.2 dated 2017-02-10 and 0.3.3 dated 2017-10-03
DESCRIPTION | 10 +++++----- MD5 | 16 ++++++++-------- NEWS.md | 3 +++ R/Automat.R | 16 ++++++++-------- R/RcppExports.R | 22 +++++++++++----------- inst/doc/Automat.html | 25 +++++++++++++------------ inst/doc/Strings.html | 28 ++++++++++++++-------------- src/RcppExports.cpp | 42 +++++++++++++++++++++++++++++++----------- tests/testthat/test-automat.R | 3 +++ 9 files changed, 96 insertions(+), 69 deletions(-)
Title: Invariant Causal Prediction
Description: Confidence intervals for causal effects, using data collected in different experimental or environmental conditions. Hidden variables can be included in the model with a more experimental version.
Author: Nicolai Meinshausen [aut, cre], Dominik Rothenhaeusler [aut]
Maintainer: Nicolai Meinshausen <meinshausen@stat.math.ethz.ch>
Diff between InvariantCausalPrediction versions 0.6-1 dated 2016-05-03 and 0.7-1 dated 2017-10-03
DESCRIPTION | 12 +++++------ MD5 | 18 ++++++++++------ NAMESPACE | 15 ++++++++++++++ R/ICP.R | 9 +++++--- R/causalDantzig.R |only R/print.InvariantCausalPrediction.R | 33 ++++++++++++++++++++++--------- man/ICP.Rd | 3 +- man/InvariantCausalPrediction-package.Rd | 8 +++---- man/causalDantzig.Rd |only man/hiddenICP.Rd | 13 ++++++++---- man/plot.causalDantzig.Rd |only man/summary.causalDantzig.Rd |only 12 files changed, 77 insertions(+), 34 deletions(-)
More information about InvariantCausalPrediction at CRAN
Permanent link
Title: Optimal Transport in Various Forms
Description: Solve optimal transport problems. Compute Wasserstein distances (a.k.a. Kantorovitch, Fortet--Mourier, Mallows, Earth Mover's, or minimal L_p distances), return the corresponding transference plans, and display them graphically. Objects that can be compared include grey-scale images, (weighted) point patterns, and mass vectors.
Author: Dominic Schuhmacher [aut, cre],
Björn Bähre [aut] (aha and power diagrams),
Carsten Gottschlich [aut] (simplex and shortlist),
Florian Heinemann [aut] (transport_track),
Bernhard Schmitzer [aut] (shielding),
Timo Wilm [ctb] (wpp)
Maintainer: Dominic Schuhmacher <dominic.schuhmacher@mathematik.uni-goettingen.de>
Diff between transport versions 0.9-3 dated 2017-09-29 and 0.9-4 dated 2017-10-03
DESCRIPTION | 8 ++-- MD5 | 12 +++--- NEWS | 9 +++++ man/aha.Rd | 2 - man/transport-package.Rd | 4 +- src/ShortCutSolver_CPLEX/Interfaces-CPLEX.cpp | 18 +++++----- src/ShortCutSolver_SparseSimplex/Interfaces-SparseSimplex.cpp | 15 ++++---- 7 files changed, 40 insertions(+), 28 deletions(-)
Title: Mixed-Effect Models, Particularly Spatial Models
Description: Inference in mixed-effect models, including generalized linear mixed models with spatial
correlations and models with non-Gaussian random effects (e.g., Beta Binomial,
or negative-binomial mixed models). Variation in residual variance is handled and can be modelled
as a linear model. Various approximations
of likelihood or restricted likelihood are implement, in particular h-likelihood and Laplace approximation.
Author: François Rousset [aut, cre, cph],
Jean-Baptiste Ferdy [aut, cph],
Alexandre Courtiol [aut],
GSL authors [ctb] (src/gsl_bessel.*)
Maintainer: François Rousset <francois.rousset@umontpellier.fr>
Diff between spaMM versions 2.1.6 dated 2017-07-08 and 2.2.0 dated 2017-10-03
spaMM-2.1.6/spaMM/R/findplus.R |only spaMM-2.1.6/spaMM/R/sXaug_EigenDense_QR.R |only spaMM-2.1.6/spaMM/R/sXaug_EigenDense_QRP_scaled.R |only spaMM-2.1.6/spaMM/R/sXaug_EigenSparse_LLP.R |only spaMM-2.1.6/spaMM/R/sXaug_Eigen_LDL.R |only spaMM-2.1.6/spaMM/R/sXaug_Eigen_LDLP.R |only spaMM-2.1.6/spaMM/R/sXaug_Matrix_QRP.R |only spaMM-2.1.6/spaMM/R/sXaug_Matrix_cholP.R |only spaMM-2.1.6/spaMM/R/sXaug_base_QRP.R |only spaMM-2.1.6/spaMM/R/sXaug_sparsePrecision.R |only spaMM-2.1.6/spaMM/R/sXaug_sparse_QR.R |only spaMM-2.1.6/spaMM/R/sXaug_sparse_QRP.R |only spaMM-2.1.6/spaMM/tests/testthat/test-corrHLfit.txt |only spaMM-2.2.0/spaMM/DESCRIPTION | 16 spaMM-2.2.0/spaMM/MD5 | 244 ++--- spaMM-2.2.0/spaMM/NAMESPACE | 30 spaMM-2.2.0/spaMM/R/COMPoisson.R | 335 ++++--- spaMM-2.2.0/spaMM/R/CanonizeRanPars.R | 29 spaMM-2.2.0/spaMM/R/GLM.fit.R | 119 +- spaMM-2.2.0/spaMM/R/HLCor.R | 36 spaMM-2.2.0/spaMM/R/HLCor_body.R | 367 +++++--- spaMM-2.2.0/spaMM/R/HLFactorList.R | 79 - spaMM-2.2.0/spaMM/R/HLfit.R | 72 - spaMM-2.2.0/spaMM/R/HLfit_Internals.R | 597 +++++++------ spaMM-2.2.0/spaMM/R/HLfit_b_internals.R | 73 - spaMM-2.2.0/spaMM/R/HLfit_body.R | 471 ++++++---- spaMM-2.2.0/spaMM/R/HLframes.R | 144 +-- spaMM-2.2.0/spaMM/R/LR.R | 21 spaMM-2.2.0/spaMM/R/LevenbergMstep.R | 13 spaMM-2.2.0/spaMM/R/MakeCovEst.R | 54 - spaMM-2.2.0/spaMM/R/RcppExports.R | 48 - spaMM-2.2.0/spaMM/R/TDT..R |only spaMM-2.2.0/spaMM/R/bloc_lambda.R | 6 spaMM-2.2.0/spaMM/R/calc_LRT.R | 95 +- spaMM-2.2.0/spaMM/R/calc_logdisp_cov.R | 22 spaMM-2.2.0/spaMM/R/calc_logdisp_cov_old.R | 7 spaMM-2.2.0/spaMM/R/confint.R | 15 spaMM-2.2.0/spaMM/R/corrHLfit-internals.R | 225 +++-- spaMM-2.2.0/spaMM/R/corrHLfit.R | 33 spaMM-2.2.0/spaMM/R/corrHLfit_body.R | 197 +--- spaMM-2.2.0/spaMM/R/corrMM.LRT.R | 704 ---------------- spaMM-2.2.0/spaMM/R/correlationFns.R | 24 spaMM-2.2.0/spaMM/R/cov_new_fix.R | 71 - spaMM-2.2.0/spaMM/R/dispGammaGLM.R | 7 spaMM-2.2.0/spaMM/R/expandSlash.R | 2 spaMM-2.2.0/spaMM/R/extractors.R | 45 - spaMM-2.2.0/spaMM/R/fit_as_ZX.R | 621 +++++++++++--- spaMM-2.2.0/spaMM/R/fit_as_sparsePrecision.R | 577 ++++++++++--- spaMM-2.2.0/spaMM/R/fitme.R | 25 spaMM-2.2.0/spaMM/R/fitme_body.R | 255 ++--- spaMM-2.2.0/spaMM/R/fitmecorrHLfit_body_internals.R |only spaMM-2.2.0/spaMM/R/generateName.R | 45 - spaMM-2.2.0/spaMM/R/glm.reformat.R | 9 spaMM-2.2.0/spaMM/R/inverse.Gamma.R | 2 spaMM-2.2.0/spaMM/R/is.diagonal.R | 2 spaMM-2.2.0/spaMM/R/locoptim.R | 115 -- spaMM-2.2.0/spaMM/R/mapMM.R | 14 spaMM-2.2.0/spaMM/R/merge_parlist.R | 14 spaMM-2.2.0/spaMM/R/multinomial.R | 8 spaMM-2.2.0/spaMM/R/newPLS.R | 157 +-- spaMM-2.2.0/spaMM/R/pastefrom.R | 8 spaMM-2.2.0/spaMM/R/precision_internals.R | 30 spaMM-2.2.0/spaMM/R/predict.R | 366 ++++---- spaMM-2.2.0/spaMM/R/predictor.R | 9 spaMM-2.2.0/spaMM/R/preprocess.R | 227 ++--- spaMM-2.2.0/spaMM/R/preprocess_internals.R | 19 spaMM-2.2.0/spaMM/R/profile.R | 7 spaMM-2.2.0/spaMM/R/sXaug_EigenDense_QRP_Chol_scaled.R |only spaMM-2.2.0/spaMM/R/sXaug_Matrix_QRP_CHM.R |only spaMM-2.2.0/spaMM/R/sXaug_sparsePrecisions.R |only spaMM-2.2.0/spaMM/R/separator.R | 13 spaMM-2.2.0/spaMM/R/simulate.HL.R | 35 spaMM-2.2.0/spaMM/R/slashTerms.R | 5 spaMM-2.2.0/spaMM/R/spaMM.data.R | 18 spaMM-2.2.0/spaMM/R/structures.R | 2 spaMM-2.2.0/spaMM/R/subbarsMM.R | 7 spaMM-2.2.0/spaMM/R/summary.HL.R | 124 +- spaMM-2.2.0/spaMM/R/update.HL.R | 12 spaMM-2.2.0/spaMM/R/utils.R | 5 spaMM-2.2.0/spaMM/data/Loaloa.RData |binary spaMM-2.2.0/spaMM/inst/NEWS.Rd | 26 spaMM-2.2.0/spaMM/man/GLM.fit.Rd | 12 spaMM-2.2.0/spaMM/man/HLCor.Rd | 17 spaMM-2.2.0/spaMM/man/HLfit.Rd | 18 spaMM-2.2.0/spaMM/man/Loaloa.Rd | 16 spaMM-2.2.0/spaMM/man/Matern.corr.Rd | 1 spaMM-2.2.0/spaMM/man/PLS-internals.Rd | 88 +- spaMM-2.2.0/spaMM/man/anova.HLfit.Rd | 1 spaMM-2.2.0/spaMM/man/arabidopsis.Rd | 13 spaMM-2.2.0/spaMM/man/autoregressive.Rd | 6 spaMM-2.2.0/spaMM/man/corMatern.Rd | 12 spaMM-2.2.0/spaMM/man/corrHLfit.Rd | 5 spaMM-2.2.0/spaMM/man/covStruct.Rd |only spaMM-2.2.0/spaMM/man/extractors.Rd | 8 spaMM-2.2.0/spaMM/man/fitme.Rd | 3 spaMM-2.2.0/spaMM/man/fixed.LRT.Rd | 3 spaMM-2.2.0/spaMM/man/mapMM.Rd | 4 spaMM-2.2.0/spaMM/man/options.Rd | 10 spaMM-2.2.0/spaMM/man/pedigree.Rd |only spaMM-2.2.0/spaMM/man/phiHGLM.Rd | 2 spaMM-2.2.0/spaMM/man/salamander.Rd | 13 spaMM-2.2.0/spaMM/man/seaMask.Rd | 4 spaMM-2.2.0/spaMM/man/separation.Rd |only spaMM-2.2.0/spaMM/man/spaMM-S3.Rd |only spaMM-2.2.0/spaMM/man/spaMM-conventions.Rd | 2 spaMM-2.2.0/spaMM/man/spaMM-internal-Rcpp.Rd | 32 spaMM-2.2.0/spaMM/man/spaMM-internal.Rd | 190 +--- spaMM-2.2.0/spaMM/man/spaMM.Rd | 4 spaMM-2.2.0/spaMM/man/sparse_precision.Rd |only spaMM-2.2.0/spaMM/src/PLS.cpp | 19 spaMM-2.2.0/spaMM/src/RcppExports.cpp | 12 spaMM-2.2.0/spaMM/src/init.c | 8 spaMM-2.2.0/spaMM/src/spaMM_linear.cpp | 49 - spaMM-2.2.0/spaMM/tests/test-all.R | 8 spaMM-2.2.0/spaMM/tests/testthat/test-CAR.R | 6 spaMM-2.2.0/spaMM/tests/testthat/test-COMPoisson.R | 5 spaMM-2.2.0/spaMM/tests/testthat/test-HLCor.R | 4 spaMM-2.2.0/spaMM/tests/testthat/test-HLfit.R | 2 spaMM-2.2.0/spaMM/tests/testthat/test-LRT-boot.R | 12 spaMM-2.2.0/spaMM/tests/testthat/test-LevM-and-sparse.R |only spaMM-2.2.0/spaMM/tests/testthat/test-Nugget.R | 4 spaMM-2.2.0/spaMM/tests/testthat/test-Rasch.R |only spaMM-2.2.0/spaMM/tests/testthat/test-blackbox.R | 5 spaMM-2.2.0/spaMM/tests/testthat/test-cloglog.R |only spaMM-2.2.0/spaMM/tests/testthat/test-confint.R | 6 spaMM-2.2.0/spaMM/tests/testthat/test-corMatern.R | 6 spaMM-2.2.0/spaMM/tests/testthat/test-dhglm.R | 9 spaMM-2.2.0/spaMM/tests/testthat/test-fixedLRT.R | 4 spaMM-2.2.0/spaMM/tests/testthat/test-inverse.Gamma.R | 2 spaMM-2.2.0/spaMM/tests/testthat/test-predVar.R | 34 spaMM-2.2.0/spaMM/tests/testthat/test-random-slope.R | 6 spaMM-2.2.0/spaMM/tests/testthat/test-salamander.R | 4 spaMM-2.2.0/spaMM/tests/testthat/test-sp-nsp.R | 5 spaMM-2.2.0/spaMM/tests/testthat/test-spaMM.R | 24 spaMM-2.2.0/spaMM/tests/testthat/test-spaMM_glm.R | 2 spaMM-2.2.0/spaMM/tests/testthat/test-sparsePrecision.R | 56 - 136 files changed, 3984 insertions(+), 3730 deletions(-)
Title: R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3)
Description: Protocol Buffers are a way of encoding structured data in an
efficient yet extensible format. Google uses Protocol Buffers for almost all
of its internal 'RPC' protocols and file formats. Additional documentation
is available in two included vignettes one of which corresponds to our 'JSS'
paper (2016, <doi:10.18637/jss.v071.i02>. Either version 2 or 3 of the
'Protocol Buffers' 'API' is supported.
Author: Romain Francois, Dirk Eddelbuettel, Murray Stokely and Jeroen Ooms
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RProtoBuf versions 0.4.10 dated 2017-08-13 and 0.4.11 dated 2017-10-03
RProtoBuf-0.4.10/RProtoBuf/inst/doc/RProtoBuf-intro.Rnw |only RProtoBuf-0.4.10/RProtoBuf/inst/doc/RProtoBuf-quickref.Rnw |only RProtoBuf-0.4.10/RProtoBuf/vignettes/RProtoBuf-intro.Rnw |only RProtoBuf-0.4.10/RProtoBuf/vignettes/RProtoBuf-quickref.Rnw |only RProtoBuf-0.4.11/RProtoBuf/ChangeLog | 32 RProtoBuf-0.4.11/RProtoBuf/DESCRIPTION | 24 RProtoBuf-0.4.11/RProtoBuf/MD5 | 40 RProtoBuf-0.4.11/RProtoBuf/README.md | 2 RProtoBuf-0.4.11/RProtoBuf/build/vignette.rds |binary RProtoBuf-0.4.11/RProtoBuf/cleanup | 3 RProtoBuf-0.4.11/RProtoBuf/configure | 2 RProtoBuf-0.4.11/RProtoBuf/configure.ac | 2 RProtoBuf-0.4.11/RProtoBuf/inst/NEWS.Rd | 8 RProtoBuf-0.4.11/RProtoBuf/inst/doc/RProtoBuf-intro.R | 1039 +++--------- RProtoBuf-0.4.11/RProtoBuf/inst/doc/RProtoBuf-intro.Rmd |only RProtoBuf-0.4.11/RProtoBuf/inst/doc/RProtoBuf-intro.pdf |binary RProtoBuf-0.4.11/RProtoBuf/inst/doc/RProtoBuf-paper.pdf |binary RProtoBuf-0.4.11/RProtoBuf/inst/doc/RProtoBuf-quickref.R | 97 - RProtoBuf-0.4.11/RProtoBuf/inst/doc/RProtoBuf-quickref.Rmd |only RProtoBuf-0.4.11/RProtoBuf/inst/doc/RProtoBuf-quickref.pdf |binary RProtoBuf-0.4.11/RProtoBuf/inst/doc/RProtoBuf-unitTests.pdf |binary RProtoBuf-0.4.11/RProtoBuf/src/S4_classes.h | 6 RProtoBuf-0.4.11/RProtoBuf/vignettes/RProtoBuf-intro.Rmd |only RProtoBuf-0.4.11/RProtoBuf/vignettes/RProtoBuf-quickref.Rmd |only RProtoBuf-0.4.11/RProtoBuf/vignettes/figures/fig-SER.pdf |binary 25 files changed, 424 insertions(+), 831 deletions(-)
Title: Elliptic Lambda Distribution and Option Pricing Model
Description: Elliptic lambda distribution and lambda option pricing model
have been evolved into a framework of
stable-law inspired distributions,
such as the extended stable lambda distribution for asset return,
stable count distribution for volatility,
and Lihn-Laplace process as a leptokurtic extension of Wiener process.
This package contains functions for the computation of
density, probability, quantile, random variable, fitting procedures,
option prices, volatility smile. It also comes with sample financial data,
and plotting routines.
Author: Stephen H-T. Lihn [aut, cre]
Maintainer: Stephen H-T. Lihn <stevelihn@gmail.com>
Diff between ecd versions 0.8.3 dated 2017-01-06 and 0.9.1 dated 2017-10-03
ecd-0.8.3/ecd/inst/doc/ecop-special.pdf |only ecd-0.8.3/ecd/inst/doc/elliptic.pdf |only ecd-0.9.1/ecd/DESCRIPTION | 44 + ecd-0.9.1/ecd/MD5 | 300 +++++----- ecd-0.9.1/ecd/NAMESPACE | 74 ++ ecd-0.9.1/ecd/R/ecd-constructor.R | 4 ecd-0.9.1/ecd/R/ecd-data-config-internal.R | 46 - ecd-0.9.1/ecd/R/ecd-data-method.R | 124 +++- ecd-0.9.1/ecd/R/ecd-df2ts-method.R | 6 ecd-0.9.1/ecd/R/ecd-mpfr-method.R | 31 - ecd-0.9.1/ecd/R/ecd-mpnum-method.R | 9 ecd-0.9.1/ecd/R/ecd-package.R | 2 ecd-0.9.1/ecd/R/ecd-rational-method.R | 47 + ecd-0.9.1/ecd/R/ecd-solve-generic.R | 7 ecd-0.9.1/ecd/R/ecd-solve-sym-generic.R | 5 ecd-0.9.1/ecd/R/ecld-constructor.R | 7 ecd-0.9.1/ecd/R/lamp-class.R |only ecd-0.9.1/ecd/R/lamp-constructor.R |only ecd-0.9.1/ecd/R/lamp-generate-tau-method.R |only ecd-0.9.1/ecd/R/lamp-k2mnt-method.R |only ecd-0.9.1/ecd/R/lamp-laplace-distribution-method.R |only ecd-0.9.1/ecd/R/lamp-lihnlap-distribution-method.R |only ecd-0.9.1/ecd/R/lamp-plot-sim4-method.R |only ecd-0.9.1/ecd/R/lamp-qsl-fit-config-method.R |only ecd-0.9.1/ecd/R/lamp-qsl-fit-plot-method.R |only ecd-0.9.1/ecd/R/lamp-sd-factor-method.R |only ecd-0.9.1/ecd/R/lamp-simulate-iter-method.R |only ecd-0.9.1/ecd/R/lamp-simulate1-method.R |only ecd-0.9.1/ecd/R/lamp-stable-cnt-distribution-method.R |only ecd-0.9.1/ecd/R/lamp-stable-lambda-dist-method.R |only ecd-0.9.1/ecd/R/lamp-stable-rnd-walk-method.R |only ecd-0.9.1/ecd/R/levy-dlambda-method.R |only ecd-0.9.1/ecd/R/levy-domain-coloring-method.R |only ecd-0.9.1/ecd/R/levy-dskewed-distribution-method.R |only ecd-0.9.1/ecd/inst/doc/ecd-manual.pdf |binary ecd-0.9.1/ecd/inst/extdata/data_conf.yml | 14 ecd-0.9.1/ecd/inst/extdata/qsl_fit_conf.yml |only ecd-0.9.1/ecd/inst/extdata/spx_archive_7.csv.zip |binary ecd-0.9.1/ecd/inst/extdata/vix_archive_7.csv.zip |binary ecd-0.9.1/ecd/inst/extdata/vvix_archive_7.csv.zip |only ecd-0.9.1/ecd/inst/extdata/xiv_archive_7.csv.zip |only ecd-0.9.1/ecd/man/bootstrap.ecdb.Rd | 3 ecd-0.9.1/ecd/man/dec.Rd | 1 ecd-0.9.1/ecd/man/discr.ecd.Rd | 3 ecd-0.9.1/ecd/man/dstablecnt.Rd |only ecd-0.9.1/ecd/man/ecd-class.Rd | 2 ecd-0.9.1/ecd/man/ecd-package.Rd | 1 ecd-0.9.1/ecd/man/ecd.Rd | 1 ecd-0.9.1/ecd/man/ecd.adj_gamma.Rd | 3 ecd-0.9.1/ecd/man/ecd.asymp_stats.Rd | 3 ecd-0.9.1/ecd/man/ecd.ccdf.Rd | 1 ecd-0.9.1/ecd/man/ecd.cdf.Rd | 1 ecd-0.9.1/ecd/man/ecd.cubic.Rd | 1 ecd-0.9.1/ecd/man/ecd.cusp.Rd | 1 ecd-0.9.1/ecd/man/ecd.cusp_a2r.Rd | 1 ecd-0.9.1/ecd/man/ecd.cusp_std_moment.Rd | 3 ecd-0.9.1/ecd/man/ecd.data.Rd | 45 + ecd-0.9.1/ecd/man/ecd.data_stats.Rd | 1 ecd-0.9.1/ecd/man/ecd.df2ts.Rd | 3 ecd-0.9.1/ecd/man/ecd.diff.Rd | 1 ecd-0.9.1/ecd/man/ecd.erfq.Rd | 1 ecd-0.9.1/ecd/man/ecd.estimate_const.Rd | 1 ecd-0.9.1/ecd/man/ecd.fit_data.Rd | 1 ecd-0.9.1/ecd/man/ecd.fit_ts_conf.Rd | 1 ecd-0.9.1/ecd/man/ecd.has_quantile.Rd | 1 ecd-0.9.1/ecd/man/ecd.imgf.Rd | 1 ecd-0.9.1/ecd/man/ecd.integrate.Rd | 1 ecd-0.9.1/ecd/man/ecd.lag.Rd | 1 ecd-0.9.1/ecd/man/ecd.manage_hist_tails.Rd | 1 ecd-0.9.1/ecd/man/ecd.max_kurtosis.Rd | 1 ecd-0.9.1/ecd/man/ecd.mp2f.Rd | 1 ecd-0.9.1/ecd/man/ecd.mpfr.Rd | 22 ecd-0.9.1/ecd/man/ecd.mpfr_qagi.Rd | 1 ecd-0.9.1/ecd/man/ecd.mpnum.Rd | 6 ecd-0.9.1/ecd/man/ecd.ogf.Rd | 1 ecd-0.9.1/ecd/man/ecd.pdf.Rd | 1 ecd-0.9.1/ecd/man/ecd.polar.Rd | 1 ecd-0.9.1/ecd/man/ecd.rational.Rd | 22 ecd-0.9.1/ecd/man/ecd.read_csv_by_symbol.Rd | 1 ecd-0.9.1/ecd/man/ecd.read_symbol_conf.Rd | 1 ecd-0.9.1/ecd/man/ecd.sd.Rd | 9 ecd-0.9.1/ecd/man/ecd.setup_const.Rd | 1 ecd-0.9.1/ecd/man/ecd.solve_cusp_asym.Rd | 1 ecd-0.9.1/ecd/man/ecd.stats.Rd | 1 ecd-0.9.1/ecd/man/ecd.toString.Rd | 1 ecd-0.9.1/ecd/man/ecd.ts_lag_stats.Rd | 1 ecd-0.9.1/ecd/man/ecd.uniroot.Rd | 1 ecd-0.9.1/ecd/man/ecd.y0_isomorphic.Rd | 1 ecd-0.9.1/ecd/man/ecdattr-class.Rd | 2 ecd-0.9.1/ecd/man/ecdattr.Rd | 1 ecd-0.9.1/ecd/man/ecdattr.enrich.Rd | 1 ecd-0.9.1/ecd/man/ecdattr.pairs.Rd | 1 ecd-0.9.1/ecd/man/ecdattr.pairs_polar.Rd | 1 ecd-0.9.1/ecd/man/ecdb-class.Rd | 2 ecd-0.9.1/ecd/man/ecdb.Rd | 1 ecd-0.9.1/ecd/man/ecdb.dbSendQuery.Rd | 1 ecd-0.9.1/ecd/man/ecdb.protectiveCommit.Rd | 1 ecd-0.9.1/ecd/man/ecdq-class.Rd | 2 ecd-0.9.1/ecd/man/ecdq.Rd | 1 ecd-0.9.1/ecd/man/ecld-class.Rd | 2 ecd-0.9.1/ecd/man/ecld.Rd | 5 ecd-0.9.1/ecd/man/ecld.cdf.Rd | 5 ecd-0.9.1/ecd/man/ecld.const.Rd | 1 ecd-0.9.1/ecd/man/ecld.fixed_point_SN0_atm_ki.Rd | 5 ecd-0.9.1/ecd/man/ecld.gamma.Rd | 3 ecd-0.9.1/ecd/man/ecld.imgf.Rd | 3 ecd-0.9.1/ecd/man/ecld.imnt.Rd | 1 ecd-0.9.1/ecd/man/ecld.ivol_ogf_star.Rd | 1 ecd-0.9.1/ecd/man/ecld.mgf_term.Rd | 3 ecd-0.9.1/ecd/man/ecld.moment.Rd | 3 ecd-0.9.1/ecd/man/ecld.mpnum.Rd | 5 ecd-0.9.1/ecd/man/ecld.mu_D.Rd | 3 ecd-0.9.1/ecd/man/ecld.ogf.Rd | 5 ecd-0.9.1/ecd/man/ecld.ogf_star.Rd | 5 ecd-0.9.1/ecd/man/ecld.op_Q.Rd | 9 ecd-0.9.1/ecd/man/ecld.op_V.Rd | 3 ecd-0.9.1/ecd/man/ecld.pdf.Rd | 1 ecd-0.9.1/ecd/man/ecld.quartic_Qp.Rd | 5 ecd-0.9.1/ecd/man/ecld.quartic_Qp_atm_attr.Rd | 1 ecd-0.9.1/ecd/man/ecld.quartic_SN0_atm_ki.Rd | 3 ecd-0.9.1/ecd/man/ecld.sd.Rd | 9 ecd-0.9.1/ecd/man/ecld.sged_const.Rd | 7 ecd-0.9.1/ecd/man/ecld.solve.Rd | 5 ecd-0.9.1/ecd/man/ecld.y_slope.Rd | 1 ecd-0.9.1/ecd/man/ecldOrEcd-class.Rd | 2 ecd-0.9.1/ecd/man/ecop-class.Rd | 2 ecd-0.9.1/ecd/man/ecop.bs_implied_volatility.Rd | 1 ecd-0.9.1/ecd/man/ecop.bs_option_price.Rd | 3 ecd-0.9.1/ecd/man/ecop.find_fixed_point_lambda_by_atm_skew.Rd | 4 ecd-0.9.1/ecd/man/ecop.find_fixed_point_sd_by_lambda.Rd | 1 ecd-0.9.1/ecd/man/ecop.from_symbol_conf.Rd | 3 ecd-0.9.1/ecd/man/ecop.get_ld_triple.Rd | 1 ecd-0.9.1/ecd/man/ecop.opt-class.Rd | 2 ecd-0.9.1/ecd/man/ecop.plot_option.Rd | 1 ecd-0.9.1/ecd/man/ecop.polyfit_option.Rd | 1 ecd-0.9.1/ecd/man/ecop.read_csv_by_symbol.Rd | 3 ecd-0.9.1/ecd/man/ecop.term_master_calculator.Rd | 3 ecd-0.9.1/ecd/man/ecop.term_plot_3x3.Rd | 5 ecd-0.9.1/ecd/man/ecop.vix_plot_3x3.Rd | 1 ecd-0.9.1/ecd/man/ellipticity.ecd.Rd | 3 ecd-0.9.1/ecd/man/history.ecdb.Rd | 3 ecd-0.9.1/ecd/man/integrate_pdf.ecd.Rd | 3 ecd-0.9.1/ecd/man/jinv.ecd.Rd | 3 ecd-0.9.1/ecd/man/k2mnt.Rd |only ecd-0.9.1/ecd/man/lamp-class.Rd |only ecd-0.9.1/ecd/man/lamp.Rd |only ecd-0.9.1/ecd/man/lamp.generate_tau.Rd |only ecd-0.9.1/ecd/man/lamp.plot_sim4.Rd |only ecd-0.9.1/ecd/man/lamp.qsl_fit_config.Rd |only ecd-0.9.1/ecd/man/lamp.qsl_fit_plot.Rd |only ecd-0.9.1/ecd/man/lamp.sd_factor.Rd |only ecd-0.9.1/ecd/man/lamp.simulate1.Rd |only ecd-0.9.1/ecd/man/lamp.simulate_iter.Rd |only ecd-0.9.1/ecd/man/lamp.stable_rnd_walk.Rd |only ecd-0.9.1/ecd/man/levy.dlambda.Rd |only ecd-0.9.1/ecd/man/levy.domain_coloring.Rd |only ecd-0.9.1/ecd/man/levy.dskewed.Rd |only ecd-0.9.1/ecd/man/moment.ecd.Rd | 3 ecd-0.9.1/ecd/man/numericMpfr-class.Rd | 2 ecd-0.9.1/ecd/man/plot_2x2.ecd.Rd | 3 ecd-0.9.1/ecd/man/quantilize.ecd.Rd | 3 ecd-0.9.1/ecd/man/read.ecdb.Rd | 3 ecd-0.9.1/ecd/man/rlaplace0.Rd |only ecd-0.9.1/ecd/man/rlihnlap.Rd |only ecd-0.9.1/ecd/man/rqsl.Rd |only ecd-0.9.1/ecd/man/solve.ecd.Rd | 3 ecd-0.9.1/ecd/man/solve_sym.ecd.Rd | 3 ecd-0.9.1/ecd/man/solve_trig.ecd.Rd | 3 ecd-0.9.1/ecd/man/summary.ecdb.Rd | 3 ecd-0.9.1/ecd/man/write.ecdb.Rd | 3 ecd-0.9.1/ecd/man/y_slope.ecd.Rd | 3 ecd-0.9.1/ecd/tests/testthat/test-levy-ecd.R |only 172 files changed, 648 insertions(+), 415 deletions(-)
Title: Simulation of Study Data
Description: Simulates data sets in order to explore modeling techniques or
better understand data generating processes. The user specifies a set of
relationships between covariates, and generates data based on these
specifications. The final data sets can represent data from randomized
control trials, repeated measure (longitudinal) designs, and cluster
randomized trials. Missingness can be generated using various
mechanisms (MCAR, MAR, NMAR).
Author: Keith Goldfeld [aut, cre]
Maintainer: Keith Goldfeld <Keith.Goldfeld@nyumc.org>
Diff between simstudy versions 0.1.4 dated 2017-09-20 and 0.1.5 dated 2017-10-03
DESCRIPTION | 8 ++--- MD5 | 29 +++++++++++++-------- NAMESPACE | 2 + NEWS.md | 61 +++++++++++++++++++++++++-------------------- R/defData.R | 12 +++----- R/delColumns.R |only R/int_evalDef.R | 10 ++++--- R/int_genNegBinom.R |only R/int_genUnifInt.R |only R/int_generate.R | 9 +++++- R/int_genexp.R |only R/negbinomGetSizeProb.R |only build/vignette.rds |binary inst/doc/simstudy.Rmd | 18 ++++++------- inst/doc/simstudy.html | 12 +++++--- man/defData.Rd | 3 +- man/delColumns.Rd |only man/negbinomGetSizeProb.Rd |only vignettes/simstudy.Rmd | 18 ++++++------- 19 files changed, 105 insertions(+), 77 deletions(-)
Title: 'RStudio' Addin for Editing a 'data.frame'
Description: An 'RStudio' addin for editing a 'data.frame' or a 'tibble'. You can delete, add or update a 'data.frame'
without coding. You can get resultant data as a 'data.frame'. In the package, modularized shiny app codes are provided.
These module are intended for reuse across applications.
Author: Keon-Woong Moon [aut, cre]
Maintainer: Keon-Woong Moon <cardiomoon@gmail.com>
Diff between editData versions 0.1.0 dated 2017-09-24 and 0.1.1 dated 2017-10-03
editData-0.1.0/editData/R/editData.R |only editData-0.1.1/editData/DESCRIPTION | 9 +-- editData-0.1.1/editData/MD5 | 18 +++--- editData-0.1.1/editData/NAMESPACE | 23 ++++++- editData-0.1.1/editData/NEWS.md | 11 +++ editData-0.1.1/editData/R/editableDT2.R |only editData-0.1.1/editData/R/textInput3.R | 75 +++++++++++++++++++++++++ editData-0.1.1/editData/inst/doc/editData.html | 4 - editData-0.1.1/editData/man/dateInput3.Rd |only editData-0.1.1/editData/man/editData.Rd | 2 editData-0.1.1/editData/man/editableDT.Rd |only editData-0.1.1/editData/man/editableDTUI.Rd |only editData-0.1.1/editData/man/radioButtons3.Rd |only 13 files changed, 123 insertions(+), 19 deletions(-)
Title: Design-Based Global and Small-Area Estimations for Multiphase
Forest Inventories
Description: Extensive global and small-area estimation procedures for multiphase
forest inventories under the design-based Monte-Carlo approach are provided.
The implementation includes estimators for simple and cluster sampling
published by Daniel Mandallaz in 2007 (<DOI:10.1201/9781584889779>),
2013 (<DOI:10.1139/cjfr-2012-0381>, <DOI:10.1139/cjfr-2013-0181>,
<DOI:10.1139/cjfr-2013-0449>, <DOI:10.3929/ethz-a-009990020>)
and 2016 (<DOI:10.3929/ethz-a-010579388>). It provides point estimates,
their external- and design-based variances as well as confidence intervals.
The procedures have also been optimized for the use of remote sensing data
as auxiliary information.
Author: Andreas Hill [aut, cre],
Alexander Massey [aut],
Daniel Mandallaz [ctb]
Maintainer: Andreas Hill <andreas.hill@usys.ethz.ch>
Diff between forestinventory versions 0.2.0 dated 2017-05-21 and 0.3.0 dated 2017-10-03
DESCRIPTION | 10 - MD5 | 32 ++- NAMESPACE | 6 NEWS | 4 R/confint_methods.R | 4 R/errorchecking.R | 23 ++ R/esttable.R |only R/global_nonexhaustive2p_cluster.R | 5 R/mphasegain.R |only R/plot_methods.R |only R/print_methods.R | 13 + R/small_area_nonexhaustive2p.R | 314 ++++++++++++++++++------------------- R/threephase.R | 88 +++++----- R/twophase.R | 42 +++- README.md | 63 ++++--- man/confint.Rd | 4 man/estTable.Rd |only man/mphase.gain.Rd |only man/plot.esttable.Rd |only man/threephase.Rd | 38 ++-- 20 files changed, 362 insertions(+), 284 deletions(-)
More information about forestinventory at CRAN
Permanent link
Title: Descriptive Interpretations of Confidence Intervals
Description: Produces descriptive interpretations of confidence intervals.
Includes (extensible) support for various test types, specified as sets
of interpretations dependent on where the lower and upper confidence limits
sit. Provides plotting functions for graphical display of interpretations.
Author: Jim Vine [aut, cre]
Maintainer: Jim Vine <code@jimvine.co.uk>
Diff between confinterpret versions 0.2.0 dated 2017-05-11 and 1.0.0 dated 2017-10-03
DESCRIPTION | 8 MD5 | 40 - NAMESPACE | 6 NEWS.md | 18 R/confinterpret.R | 46 - R/interpretation_result.R |only R/interpretation_set.R | 5 R/plot.R | 984 ++++++++++++++++++++++++++++++--- R/plot_result_list.R |only R/print.R |only README.md | 5 man/confinterpret.Rd | 12 man/interpret_equivalence.Rd | 5 man/interpret_noninferiority.Rd | 5 man/interpret_superiority.Rd | 5 man/interpretation_result.Rd |only man/interpretation_set.Rd | 5 man/label_ontop_boundaries.Rd |only man/plot.interpretation_result.Rd |only man/plot.interpretation_set.Rd | 2 man/plot_interpretation_result_list.Rd |only man/plot_intervals.Rd |only man/plot_intervals_norm.Rd |only man/plot_intervals_unif.Rd |only man/plot_region_canvas.Rd |only man/strwidthl.Rd |only man/validate_interpretation_result.Rd |only man/validate_result_list.Rd |only 28 files changed, 1009 insertions(+), 137 deletions(-)
Title: Hyphenation and Syllable Counting for Text Analysis
Description: Provides the hyphenation algorithm used for 'TeX'/'LaTeX'
and similar software, as proposed by Liang (1983,
<https://tug.org/docs/liang/>). Mainly contains the function
hyphen() to be used for hyphenation/syllable counting of text
objects. It was originally developed for and part of the
'koRpus' package, but later released as a separate package so
it's lighter to have this particular functionality available
for other packages. Support for various languages needs be
added on-the-fly or by plugin packages
(<https://undocumeantit.github.io/repos>); this package does
not include any language specific data. Due to some
restrictions on CRAN, the full package sources are only
available from the project homepage. To ask for help, report
bugs, request features, or discuss the development of the
package, please subscribe to the koRpus-dev mailing list
(<http://korpusml.reaktanz.de>).
Author: Meik Michalke [aut, cre]
Maintainer: Meik Michalke <meik.michalke@hhu.de>
Diff between sylly versions 0.1-2 dated 2017-09-12 and 0.1-3 dated 2017-10-03
ChangeLog | 10 ++++++ DESCRIPTION | 24 ++++++++------- MD5 | 30 +++++++++---------- R/get.sylly.env.R | 4 -- R/set.sylly.env.R | 4 -- R/sylly-internal_langpack_generator.R | 19 +++++++++--- R/sylly-package.R | 14 ++++----- README.md | 52 +++++++++++++++++++++++++++------- inst/CITATION | 4 +- inst/NEWS.Rd | 13 ++++++++ inst/doc/sylly_vignette.Rnw | 8 +++-- inst/doc/sylly_vignette.pdf |binary man/get.sylly.env.Rd | 4 -- man/set.sylly.env.Rd | 4 -- man/sylly-package.Rd | 16 +++++----- vignettes/sylly_vignette.Rnw | 8 +++-- 16 files changed, 139 insertions(+), 75 deletions(-)
Title: Penalized Ordinal Regression
Description: Fits ordinal regression models with elastic net penalty.
Supported model families include cumulative probability, stopping ratio,
continuation ratio, and adjacent category. These families are a subset of
vector glm's which belong to a model class we call the elementwise link
multinomial-ordinal (ELMO) class. Each family in this class links a vector
of covariates to a vector of class probabilities. Each of these families
has a parallel form, which is appropriate for ordinal response data, as
well as a nonparallel form that is appropriate for an unordered categorical
response, or as a more flexible model for ordinal data. The parallel model
has a single set of coefficients, whereas the nonparallel model has a set of
coefficients for each response category except the baseline category. It is
also possible to fit a model with both parallel and nonparallel terms, which
we call the semi-parallel model. The semi-parallel model has the flexibility
of the nonparallel model, but the elastic net penalty shrinks it toward the
parallel model. For details, refer to Wurm, Hanlon, and Rathouz (2017)
<arXiv:1706.05003>.
Author: Michael Wurm [aut, cre],
Paul Rathouz [aut],
Bret Hanlon [aut]
Maintainer: Michael Wurm <wurm@wisc.edu>
Diff between ordinalNet versions 2.2 dated 2017-08-22 and 2.3 dated 2017-10-03
DESCRIPTION | 14 +++++++------- MD5 | 28 ++++++++++++++-------------- R/ordinalNet-methods.R | 24 ++++++++++++++++++++++++ R/ordinalNetCV.R | 12 ++++++++++++ R/ordinalNetTune.R | 18 ++++++++++++++++++ man/coef.ordinalNet.Rd | 7 +++++++ man/plot.ordinalNetTune.Rd | 7 +++++++ man/predict.ordinalNet.Rd | 7 +++++++ man/print.ordinalNet.Rd | 7 +++++++ man/print.ordinalNetCV.Rd | 7 +++++++ man/print.ordinalNetTune.Rd | 7 +++++++ man/summary.ordinalNet.Rd | 7 +++++++ man/summary.ordinalNetCV.Rd | 7 +++++++ man/summary.ordinalNetTune.Rd | 7 +++++++ tests/testthat/test-ordinalNet.R | 12 ++++++------ 15 files changed, 144 insertions(+), 27 deletions(-)
Title: Interface to the Knoema API
Description: Using this package, users can access to the largest collection of public data and statistics on the Internet featuring about 2.5 billion time series from thousands of sources collected in 'Knoema' repository and use rich R calculations in order to analyze the data. Because data in 'Knoema' is time series data, 'Knoema' function offers data in a number of formats usable in R such as 'ts', 'xts' or 'zoo'. For more information about 'Knoema' API go to <https://knoema.com/dev/docs>.
Author: Pavel Pimenov [aut, cre],
Ekaterina Chirkova [aut],
Knoema [cph]
Maintainer: Pavel Pimenov <pimenov@knoema.com>
Diff between Knoema versions 0.1.7 dated 2017-08-22 and 0.1.9 dated 2017-10-03
DESCRIPTION | 10 - LICENSE | 4 MD5 | 23 +-- NAMESPACE | 1 R/ApiClient.R | 16 ++ R/ApiDefinitions.R | 36 +++-- R/DataReader.R | 279 ++++++++++++++++++++++++++++++++++++---- R/knoema.R | 3 README.md | 77 ++++++++++- tests/testthat/test_dataframe.R |only tests/testthat/test_errors.R | 6 tests/testthat/test_ts.R | 10 - tests/testthat/test_xts_zoo.R | 10 - 13 files changed, 409 insertions(+), 66 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-10-02 0.8.1
Title: Augmented and Penalized Minimization Method L0
Description: Fit linear, logistic and Cox models regularized with L0, lasso (L1), elastic-net (L1 and L2), or net (L1 and Laplacian) penalty, and their adaptive forms, such as adaptive lasso / elastic-net and net adjusting for signs of linked coefficients. It solves L0 penalty problem by simultaneously selecting regularization parameters and the number of non-zero coefficients. This augmented and penalized minimization method provides an approximation solution to the L0 penalty problem, but runs as fast as L1 regularization problem. The package uses one-step coordinate descent algorithm and runs extremely fast by taking into account the sparsity structure of coefficients. It could deal with very high dimensional data and has superior selection performance.
Author: Xiang Li, Shanghong Xie, Donglin Zeng and Yuanjia Wang
Maintainer: Xiang Li <xli256@its.jnj.com>
Diff between APML0 versions 0.4 dated 2017-09-18 and 0.5 dated 2017-10-03
DESCRIPTION | 6 MD5 | 16 - R/APML0.R | 4 R/net_cox.R | 2 R/net_logit.R | 147 ++++++--- R/print.APML0.R | 6 man/APML0-package.Rd | 11 man/APML0.Rd | 14 src/APML0.cpp | 764 +++++++++++++++++++++++++-------------------------- 9 files changed, 507 insertions(+), 463 deletions(-)
Title: Psychometric Meta-Analysis Toolkit
Description: Tools for computing bare-bones and psychometric meta-analyses and for generating psychometric data for use in meta-analysis simulations. Supports bare-bones, individual-correction, and artifact-distribution methods for meta-analyzing correlations and d values. Includes tools for converting effect sizes, computing sporadic artifact corrections, reshaping meta-analytic databases, computing multivariate corrections for range variation, and more.
Author: Jeffrey A. Dahlke [aut, cre],
Brenton M. Wiernik [aut],
Michael T. Brannick [ctb],
Jack Kostal [ctb],
Sean Potter [ctb],
Yuejia (Mandy) Teng [ctb]
Maintainer: Jeffrey A. Dahlke <dahlk068@umn.edu>
Diff between psychmeta versions 0.1.0 dated 2017-08-21 and 0.1.1 dated 2017-10-03
psychmeta-0.1.0/psychmeta/R/simulate.R |only psychmeta-0.1.0/psychmeta/man/var_error_r_bvdrr.Rd |only psychmeta-0.1.1/psychmeta/DESCRIPTION | 10 psychmeta-0.1.1/psychmeta/MD5 | 121 ++-- psychmeta-0.1.1/psychmeta/NAMESPACE | 17 psychmeta-0.1.1/psychmeta/NEWS | 18 psychmeta-0.1.1/psychmeta/R/convert_ma.R | 22 psychmeta-0.1.1/psychmeta/R/correct_d.R | 33 + psychmeta-0.1.1/psychmeta/R/correct_mvrr.R | 16 psychmeta-0.1.1/psychmeta/R/correct_r.R | 28 - psychmeta-0.1.1/psychmeta/R/create_ad.R | 19 psychmeta-0.1.1/psychmeta/R/data_wrangling.R | 3 psychmeta-0.1.1/psychmeta/R/estimate_prods.R |only psychmeta-0.1.1/psychmeta/R/estimate_var_artifacts.R | 216 ++++--- psychmeta-0.1.1/psychmeta/R/filters.R | 13 psychmeta-0.1.1/psychmeta/R/heterogeneity.R | 1 psychmeta-0.1.1/psychmeta/R/ma_d.R | 70 +- psychmeta-0.1.1/psychmeta/R/ma_d_ad.R | 86 ++- psychmeta-0.1.1/psychmeta/R/ma_d_bb.R | 6 psychmeta-0.1.1/psychmeta/R/ma_d_ic.R | 64 +- psychmeta-0.1.1/psychmeta/R/ma_d_order2.R | 2 psychmeta-0.1.1/psychmeta/R/ma_generic.R |only psychmeta-0.1.1/psychmeta/R/ma_r.R | 159 ++++- psychmeta-0.1.1/psychmeta/R/ma_r_ad.R | 126 ++-- psychmeta-0.1.1/psychmeta/R/ma_r_bb.R | 9 psychmeta-0.1.1/psychmeta/R/ma_r_ic.R | 143 ++--- psychmeta-0.1.1/psychmeta/R/ma_r_order2.R | 8 psychmeta-0.1.1/psychmeta/R/ma_wrappers.R | 5 psychmeta-0.1.1/psychmeta/R/mix_matrix.R |only psychmeta-0.1.1/psychmeta/R/print_methods.R | 130 ++++ psychmeta-0.1.1/psychmeta/R/psychmeta.R | 2 psychmeta-0.1.1/psychmeta/R/remove_dependency.R | 27 psychmeta-0.1.1/psychmeta/R/sensitivity.R | 20 psychmeta-0.1.1/psychmeta/R/sensitivity_bootstrap.R | 21 psychmeta-0.1.1/psychmeta/R/sensitivity_cumulative.R | 27 psychmeta-0.1.1/psychmeta/R/sensitivity_leave1out.R | 20 psychmeta-0.1.1/psychmeta/R/simulate_d.R |only psychmeta-0.1.1/psychmeta/R/simulate_psych.R |only psychmeta-0.1.1/psychmeta/R/simulate_r.R |only psychmeta-0.1.1/psychmeta/R/truncate.R | 6 psychmeta-0.1.1/psychmeta/R/var_error_tsa.R | 274 +++++----- psychmeta-0.1.1/psychmeta/R/wt_stat.R | 10 psychmeta-0.1.1/psychmeta/README.md | 32 - psychmeta-0.1.1/psychmeta/man/check_wt_type.Rd | 4 psychmeta-0.1.1/psychmeta/man/correct_means_mvrr.Rd | 6 psychmeta-0.1.1/psychmeta/man/estimate_prod.Rd |only psychmeta-0.1.1/psychmeta/man/estimate_var_artifacts.Rd | 66 +- psychmeta-0.1.1/psychmeta/man/format_long.Rd | 2 psychmeta-0.1.1/psychmeta/man/format_wide.Rd | 2 psychmeta-0.1.1/psychmeta/man/generate_directory.Rd | 2 psychmeta-0.1.1/psychmeta/man/ma_d.Rd | 6 psychmeta-0.1.1/psychmeta/man/ma_d_ad.Rd | 2 psychmeta-0.1.1/psychmeta/man/ma_d_ic.Rd | 2 psychmeta-0.1.1/psychmeta/man/ma_r_generic.Rd |only psychmeta-0.1.1/psychmeta/man/merge_simdat_d.Rd |only psychmeta-0.1.1/psychmeta/man/merge_simdat_r.Rd | 2 psychmeta-0.1.1/psychmeta/man/mix_matrix.Rd |only psychmeta-0.1.1/psychmeta/man/print.psychmeta.ma_generic.Rd |only psychmeta-0.1.1/psychmeta/man/print.psychmeta.simulate_psych.Rd |only psychmeta-0.1.1/psychmeta/man/psychmeta-package.Rd | 2 psychmeta-0.1.1/psychmeta/man/simulate_alpha.Rd | 2 psychmeta-0.1.1/psychmeta/man/simulate_d_database.Rd |only psychmeta-0.1.1/psychmeta/man/simulate_d_sample.Rd |only psychmeta-0.1.1/psychmeta/man/simulate_matrix.Rd | 2 psychmeta-0.1.1/psychmeta/man/simulate_psych.Rd |only psychmeta-0.1.1/psychmeta/man/simulate_r_database.Rd | 23 psychmeta-0.1.1/psychmeta/man/simulate_r_sample.Rd | 11 psychmeta-0.1.1/psychmeta/man/sparsify_simdat_d.Rd |only psychmeta-0.1.1/psychmeta/man/sparsify_simdat_r.Rd | 2 psychmeta-0.1.1/psychmeta/man/unmix_matrix.Rd |only psychmeta-0.1.1/psychmeta/man/var_error_r_bvirr.Rd | 57 +- 71 files changed, 1289 insertions(+), 668 deletions(-)