Title: Create 'roxygen2' Skeleton with Information from Function Script
Description: Create 'roxygen2' skeleton populated with information scraped from the
within the function script. Also creates field entries for imports in the
'DESCRIPTION' and import in the 'NAMESPACE' files. Can be run from the R
console or through the 'RStudio' 'addin' menu.
Author: c(person("Jonathan", "Sidi", email = "yonis@metrumrg.com", role = c("aut",
"cre")), person("Anton","Grishin",role = "ctb"),
person("Lorenzo","Busetto",role = "ctb"))
Maintainer: Jonathan Sidi <yonis@metrumrg.com>
Diff between sinew versions 0.3.2 dated 2017-09-16 and 0.3.5.1 dated 2017-10-28
DESCRIPTION | 23 ++++---- MD5 | 24 +++++--- NAMESPACE | 7 ++ NEWS.md |only R/create_yml.R |only R/makeImport.R | 130 ++++++++++++++++++++++++++---------------------- R/makeOxyFile.R | 6 +- R/makeSeeAlso.R | 4 + R/pretty_namespace.R |only R/something.R |only R/untangle.R | 11 ++-- build/sinew.pdf |binary man/create_yml.Rd |only man/makeImport.Rd | 15 +++-- man/pretty_namespace.Rd |only man/untangle.Rd | 3 + 16 files changed, 132 insertions(+), 91 deletions(-)
Title: Zig-Zag Sampler
Description: Implements the Zig-Zag algorithm with subsampling and control variates (ZZ-CV) of (Bierkens, Fearnhead, Roberts, 2016) <arXiv:1607.03188> as applied to Bayesian logistic regression, as well as basic Zig-Zag for a Gaussian target distribution.
Author: Joris Bierkens
Maintainer: Joris Bierkens <joris.bierkens@tudelft.nl>
Diff between RZigZag versions 0.1.3 dated 2017-10-17 and 0.1.4 dated 2017-10-28
DESCRIPTION | 8 ++--- MD5 | 14 ++++----- NEWS.md | 4 ++ R/RcppExports.R | 6 +-- man/ZigZagLogistic.Rd | 4 +- src/RZigZag.cpp | 77 +++++++++++++++++++++++++------------------------- src/RZigZag.h | 8 ++--- src/RcppExports.cpp | 8 ++--- 8 files changed, 67 insertions(+), 62 deletions(-)
Title: Network Estimation for Time Series
Description: Sparse VAR estimation based on LASSO.
Author: Christian Brownlees
Maintainer: Christian Brownlees <christian.brownlees@upf.edu>
Diff between nets versions 0.8 dated 2016-03-04 and 0.9 dated 2017-10-28
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- R/nets.R | 6 +++--- demo/granger.R | 4 ++-- demo/nets.R | 2 +- src/nets.c | 16 +++++++++++++++- 6 files changed, 30 insertions(+), 16 deletions(-)
Title: R Interface to 'Kokudo Suuchi' API
Description: Provides an interface to 'Kokudo Suuchi' API, the GIS data service of the Japanese government.
See <http://nlftp.mlit.go.jp/ksj-e/index.html> for more information.
Author: Hiroaki Yutani [aut, cre]
Maintainer: Hiroaki Yutani <yutani.ini@gmail.com>
Diff between kokudosuuchi versions 0.4.0 dated 2017-10-22 and 0.4.1 dated 2017-10-28
kokudosuuchi |only 1 file changed
Title: Goodness of Fit Tests for Logistic Regression Models
Description: Functions to assess the goodness of fit of binary, multinomial and ordinal logistic models.
Included are the Hosmer-Lemeshow tests (binary, multinomial and ordinal) and the Lipsitz and
Pulkstenis-Robinson tests (ordinal).
Author: Matthew Jay [aut, cre]
Maintainer: Matthew Jay <matthew.jay.15@ucl.ac.uk>
Diff between generalhoslem versions 1.2.5 dated 2017-06-24 and 1.3.0 dated 2017-10-28
generalhoslem-1.2.5/generalhoslem/man/pulkrob.chisq.Rd |only generalhoslem-1.3.0/generalhoslem/DESCRIPTION | 10 - generalhoslem-1.3.0/generalhoslem/MD5 | 16 +- generalhoslem-1.3.0/generalhoslem/NAMESPACE | 1 generalhoslem-1.3.0/generalhoslem/R/pulkrob.chisq.R | 115 ++++++++++------- generalhoslem-1.3.0/generalhoslem/R/pulkrob.deviance.R | 31 ++++ generalhoslem-1.3.0/generalhoslem/build/partial.rdb |binary generalhoslem-1.3.0/generalhoslem/man/lipsitz.test.Rd | 12 - generalhoslem-1.3.0/generalhoslem/man/logitgof.Rd | 10 - generalhoslem-1.3.0/generalhoslem/man/pulkrob.Rd |only 10 files changed, 126 insertions(+), 69 deletions(-)
Title: Datasets for Spatial Analysis
Description: Diverse spatial datasets for demonstrating, benchmarking and teaching spatial data analysis.
It includes R data of class sf (defined by the package 'sf'), Spatial (sp), and nb (spdep).
Unlike other spatial data packages such as 'rnaturalearth' and 'maps',
it also contains data stored in a range of file formats including GeoJSON, ESRI Shapefile and GeoPackage.
Some of the datasets are designed to illustrate specific analysis techniques.
cycle_hire and cycle_hire_osm, for example, is designed to illustrate point pattern analysis techniques.
This package interacts with data available through the 'spDataLarge' package,
which is available in a 'drat' repository. To access this data package,
run 'install.packages("spDataLarge", repos = <https://nowosad.github.io/drat/>, type = "source")'.
The size of the 'spDataLarge' package is approximately 20 MB.
Author: Roger Bivand [aut],
Jakub Nowosad [aut, cre] (0000-0002-1057-3721),
Robin Lovelace [aut] (0000-0001-5679-6536)
Maintainer: Jakub Nowosad <nowosad.jakub@gmail.com>
Diff between spData versions 0.2.6.0 dated 2017-10-07 and 0.2.6.2 dated 2017-10-28
DESCRIPTION | 19 +++++---- MD5 | 80 +++++++++++++++++++++-------------------- R/SplashDams.R | 2 - R/afcon.R | 2 - R/auckland.R | 2 - R/baltimore.R | 4 +- R/boston.R | 28 ++++++++++---- R/columbus.R | 2 - R/cycle_hire.R | 2 - R/cycle_hire_osm.R | 17 +++++--- R/elect80.R | 2 - R/hopkins.R | 2 - R/house.R | 2 - R/huddersfield.R | 2 - R/jenks71.R | 2 - R/lnd.R | 2 - R/nc.sids.R | 6 ++- R/nydata.R | 5 +- R/state.vbm.R | 2 - R/urban_agglomerations.R | 2 - R/us_states_df.R | 2 - R/used.cars.R | 2 - R/wheat.R | 2 - R/worldbank_df.R | 2 - data/boston.rda |binary data/cycle_hire_osm.rda |binary inst/shapes/NY8_bna_utm18.gpkg |only inst/shapes/auckland.dbf |binary inst/shapes/auckland.shp |binary inst/shapes/auckland.shx |binary inst/shapes/boston_tracts.dbf |binary inst/shapes/boston_tracts.shp |binary inst/shapes/boston_tracts.shx |binary inst/shapes/sids.dbf |binary inst/shapes/sids.shp |binary inst/shapes/sids.shx |binary inst/weights/NY_nb.gal |only man/baltimore.Rd | 2 - man/boston.Rd | 25 +++++++++--- man/cycle_hire_osm.Rd | 15 +++++-- man/nc.sids.Rd | 4 +- man/nydata.Rd | 2 - 42 files changed, 141 insertions(+), 100 deletions(-)
Title: Implement Material Design in Shiny Applications
Description: Allows shiny developers to incorporate UI elements based on Google's Material design. See <https://material.io/guidelines/> for more information.
Author: Eric Anderson [aut, cre],
Alvin Wang [ctb, cph] (Materialize CSS library),
Alan Chang [ctb, cph] (Materialize CSS library),
Alex Mark [ctb, cph] (Materialize CSS library),
Kevin Louie [ctb, cph] (Materialize CSS library)
Maintainer: Eric Anderson <eric.ray.anderson@gmail.com>
Diff between shinymaterial versions 0.4.0 dated 2017-10-27 and 0.4.1 dated 2017-10-28
DESCRIPTION | 6 +++--- MD5 | 6 +++--- R/shiny-material-page.R | 4 ++-- inst/doc/shinymaterial.pdf |binary 4 files changed, 8 insertions(+), 8 deletions(-)
Title: Bayesian Model to Find Changepoints Based on Rates and Count
Data
Description: This function fits a reversible jump Bayesian piecewise exponential model that also includes the intensity of each event considered along with the rate of events.
Author: Andrew G. Chapple
Maintainer: Andrew G. Chapple <agc6@rice.edu>
Diff between PieceExpIntensity versions 1.0.0 dated 2017-10-27 and 1.0.1 dated 2017-10-28
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NAMESPACE | 3 --- src/PieceRATE13.cpp | 32 ++++++++++++++++++++++---------- 4 files changed, 28 insertions(+), 19 deletions(-)
More information about PieceExpIntensity at CRAN
Permanent link
Title: Multicollinearity Diagnostic Measures
Description: Package computes popular and widely used multicollinearity diagnostic measures. Package also indicates which regressors may be the reason of collinearity among regressors.
Author: Muhammad Imdad Ullah and Dr. Muhammad Aslam
Maintainer: Muhammad Imdad Ullah <mimdadasad@gmail.com>
Diff between mctest versions 1.1 dated 2016-12-05 and 1.1.1 dated 2017-10-28
DESCRIPTION | 12 +++++++----- MD5 | 20 ++++++++++---------- NAMESPACE | 5 ----- R/imcdiag.R | 49 +++++++++++++++++++++++++++++++++++++++---------- R/omcdiag.R | 19 ++++++++++++++----- inst/NEWS.Rd | 8 ++++++++ man/imcdiag.Rd | 20 ++++++++++---------- man/mc.plot.Rd | 15 ++++++++------- man/mctest-package.Rd | 2 +- man/mctest.Rd | 14 ++++++++------ man/omcdiag.Rd | 21 ++++++++++++--------- 11 files changed, 117 insertions(+), 68 deletions(-)
Title: Miscellaneous Functions for the USGS INL Project Office
Description: A collection of functions for creating high-level graphics,
performing raster-based analysis, processing MODFLOW-based models, etc.
Used to support packages and scripts written by researchers at the
United States Geological Survey (USGS)
Idaho National Laboratory (INL) Project Office.
Author: Jason C. Fisher [aut, cre]
Maintainer: Jason C. Fisher <jfisher@usgs.gov>
Diff between inlmisc versions 0.3.4 dated 2017-10-26 and 0.3.5 dated 2017-10-28
inlmisc-0.3.4/inlmisc/R/AddCertificate.R |only inlmisc-0.3.5/inlmisc/DESCRIPTION | 8 +-- inlmisc-0.3.5/inlmisc/MD5 | 29 ++++++------- inlmisc-0.3.5/inlmisc/NEWS.md | 10 ++++ inlmisc-0.3.5/inlmisc/R/CreateWebMap.R | 2 inlmisc-0.3.5/inlmisc/R/FormatPval.R | 10 ++-- inlmisc-0.3.5/inlmisc/R/GetDaysInMonth.R | 3 + inlmisc-0.3.5/inlmisc/R/Grid2Polygons.R | 10 ++++ inlmisc-0.3.5/inlmisc/R/POSIXct2Character.R | 4 + inlmisc-0.3.5/inlmisc/R/PlotMap.R | 4 - inlmisc-0.3.5/inlmisc/R/ReadCodeChunks.R | 8 --- inlmisc-0.3.5/inlmisc/R/RecreateLibrary.R | 62 ++++++++++++++++++++++++++++ inlmisc-0.3.5/inlmisc/R/SetPolygons.R | 6 +- inlmisc-0.3.5/inlmisc/R/ToScientific.R | 8 +++ inlmisc-0.3.5/inlmisc/README.md | 1 inlmisc-0.3.5/inlmisc/man/AddCertificate.Rd | 7 ++- 16 files changed, 135 insertions(+), 37 deletions(-)
Title: Modelling Actual, Potential and Reference Crop
Evapotranspiration
Description: Uses data and constants to calculate potential evapotranspiration (PET) and actual evapotranspiration (AET) from 21 different formulations including Penman, Penman-Monteith FAO 56, Priestley-Taylor and Morton formulations.
Author: Danlu Guo [aut, cre] <danlu.guo@adelaide.edu.au>, Seth Westra [aut] <swestra@civeng.adelaide.edu.au>, Tim Peterson [ctb] <timjp@unimelb.edu.au>
Maintainer: Danlu Guo <danlu.guo@unimelb.edu.au>
Diff between Evapotranspiration versions 1.11 dated 2017-07-19 and 1.12 dated 2017-10-28
DESCRIPTION | 13 MD5 | 50 NEWS | 22 R/Evapotranspiration.R | 2285 +++++++++++++++++++++++-------------------- R/Reading.R | 5 man/ET.Abtew.Rd | 30 man/ET.BlaneyCriddle.Rd | 34 man/ET.BrutsaertStrickler.Rd | 33 man/ET.ChapmanAustralian.Rd | 33 man/ET.GrangerGray.Rd | 33 man/ET.Hamon.Rd | 25 man/ET.HargreavesSamani.Rd | 26 man/ET.JensenHaise.Rd | 30 man/ET.Linacre.Rd | 26 man/ET.Makkink.Rd | 30 man/ET.MattShuttleworth.Rd | 32 man/ET.McGuinnessBordne.Rd | 27 man/ET.MortonCRAE.Rd | 32 man/ET.MortonCRWE.Rd | 32 man/ET.PenPan.Rd | 33 man/ET.Penman.Rd | 34 man/ET.PenmanMonteith.Rd | 33 man/ET.PriestleyTaylor.Rd | 32 man/ET.Romanenko.Rd | 25 man/ET.SzilagyiJozsa.Rd | 33 man/ET.Turc.Rd | 34 26 files changed, 1652 insertions(+), 1370 deletions(-)
More information about Evapotranspiration at CRAN
Permanent link
Title: Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans and
K-Medoids Clustering
Description: Gaussian mixture models, k-means, mini-batch-kmeans and k-medoids
clustering with the option to plot, validate, predict (new data) and estimate the
optimal number of clusters. The package takes advantage of 'RcppArmadillo' to
speed up the computationally intensive parts of the functions.
Author: Lampros Mouselimis <mouselimislampros@gmail.com>
Maintainer: Lampros Mouselimis <mouselimislampros@gmail.com>
Diff between ClusterR versions 1.0.7 dated 2017-10-13 and 1.0.8 dated 2017-10-28
DESCRIPTION | 8 MD5 | 30 NEWS.md | 7 R/RcppExports.R | 106 - R/clustering_functions.R | 14 README.md | 3 inst/doc/the_clusterR_package.R | 4 inst/doc/the_clusterR_package.Rmd | 4 inst/doc/the_clusterR_package.html | 68 man/KMeans_rcpp.Rd | 9 man/Optimal_Clusters_KMeans.Rd | 7 src/RcppExports.cpp | 163 +- src/init.c | 180 +- src/kmeans_miniBatchKmeans_GMM_Medoids.cpp | 2303 ++++++++++++----------------- tests/testthat/test-kmeans.R | 6 vignettes/the_clusterR_package.Rmd | 4 16 files changed, 1357 insertions(+), 1559 deletions(-)
Title: 'pinp' is not 'PNAS'
Description: A 'PNAS'-alike style for 'rmarkdown', derived from the
'Proceedings of the National Academy of Sciences of the United States
of America' ('PNAS', see <https://www.pnas.org>) 'LaTeX' style, and
adapted for use with 'markdown' and 'pandoc'.
Author: Dirk Eddelbuettel and James Balamuta
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between pinp versions 0.0.2 dated 2017-09-20 and 0.0.3 dated 2017-10-28
ChangeLog | 39 ++++++++++++++++ DESCRIPTION | 10 ++-- MD5 | 28 +++++------ R/pinp.R | 47 +++++++++++++++++++- README.md | 10 ++++ build/vignette.rds |binary cleanup | 2 inst/NEWS.Rd | 16 ++++++ inst/doc/pinp.Rmd | 5 -- inst/doc/pinp.pdf |binary inst/rmarkdown/templates/pdf/resources/template.tex | 18 ++++++- inst/rmarkdown/templates/pdf/skeleton/pinp.cls | 13 ++--- inst/rmarkdown/templates/pdf/skeleton/skeleton.Rmd | 29 ++++-------- man/pinp.Rd | 47 ++++++++++++++++++++ vignettes/pinp.Rmd | 5 -- 15 files changed, 216 insertions(+), 53 deletions(-)
Title: COPPE-Cosenza Fuzzy Hierarchy Model
Description: The program implements the COPPE-Cosenza Fuzzy Hierarchy Model.
The model was based on the evaluation of local alternatives, representing
regional potentialities, so as to fulfill demands of economic projects.
After defining demand profiles in terms of their technological coefficients,
the degree of importance of factors is defined so as to represent
the productive activity. The method can detect a surplus of supply without
the restriction of the distance of classical algebra, defining a hierarchy
of location alternatives. In COPPE-Cosenza Model, the distance between
factors is measured in terms of the difference between grades of memberships
of the same factors belonging to two or more sets under comparison. The
required factors are classified under the following linguistic variables:
Critical (CR); Conditioning (C); Little Conditioning (LC); and Irrelevant
(I). And the alternatives can assume the following linguistic variables:
Excellent (Ex), Good (G), Regular (R), Weak (W), Empty (Em), Zero (Z) and
Inexistent (In). The model also provides flexibility, allowing different
aggregation rules to be performed and defined by the Decision Maker. Such
feature is considered in this package, allowing the user to define other
aggregation matrices, since it considers the same linguistic variables
mentioned.
Author: Pier Taranti [aut, cre],
Leonardo Pessoa [aut],
Carlos Cosenza [aut]
Maintainer: Pier Taranti <ptaranti@gmail.com>
Diff between coppeCosenzaR versions 0.1.2 dated 2017-07-10 and 0.1.3 dated 2017-10-28
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/aggregation-matrix-default.R | 3 ++- R/aggregation-matrix-membership-difference.R | 8 ++++---- 4 files changed, 13 insertions(+), 12 deletions(-)
Title: Global Surface Summary of the Day (GSOD) Weather Data from R
Description: Provides automated downloading, parsing, cleaning, unit conversion
and formatting of Global Surface Summary of the Day (GSOD) weather data from
the from the USA National Centers for Environmental Information (NCEI) for
use in R. Units are converted from from United States Customary System
(USCS) units to International System of Units (SI). Stations may be
individually checked for number of missing days defined by the user, where
stations with too many missing observations are omitted. Only stations with
valid reported latitude and longitude values are permitted in the final
data. Additional useful elements, saturation vapour pressure (es), actual
vapour pressure (ea) and relative humidity are calculated from the original
data and included in the final data set. The resulting data include station
identification information, state, country, latitude, longitude, elevation,
weather observations and associated flags. Data may be automatically saved
to disk. File output may be returned as a comma-separated values (CSV) or
GeoPackage (GPKG) file. Additional data are included with this R package: a
list of elevation values for stations between -60 and 60 degrees latitude
derived from the Shuttle Radar Topography Measuring Mission (SRTM). For
information on the GSOD data from NCEI, please see the GSOD readme.txt file
available from, <http://www1.ncdc.noaa.gov/pub/data/gsod/readme.txt>.
Author: Adam Sparks [aut, cre] (https://orcid.org/0000-0002-0061-8359),
Tomislav Hengl [aut] (https://orcid.org/0000-0002-9921-5129),
Andrew Nelson [aut] (https://orcid.org/0000-0002-7249-3778),
Hugh Parsonage [cph, ctb] (Wrote internal function to calcuate
distances for nearest_stations() and map code for station location
figure, both taken from our bomrang package,
https://orcid.org/0000-0003-4055-0835),
Bob Rudis [cph, ctb] (Wrote functionality to interface with NCEI server
and cache files for download,
https://orcid.org/0000-0001-5670-2640)
Maintainer: Adam Sparks <adamhsparks@gmail.com>
Diff between GSODR versions 1.0.7 dated 2017-10-16 and 1.1.0 dated 2017-10-28
DESCRIPTION | 59 - MD5 | 68 - NAMESPACE | 3 NEWS.md | 37 R/get_GSOD.R | 43 R/get_inventory.R |only R/nearest_stations.R | 36 R/process_gz.R | 337 ++---- R/reformat_GSOD.R | 14 R/update_station_list.R | 5 README.md | 315 ++--- build/vignette.rds |binary inst/doc/GSODR.R | 146 +- inst/doc/GSODR.Rmd | 145 +- inst/doc/GSODR.html | 1011 +++++++----------- inst/doc/Specified_stations_for_a_range_of_years.R | 132 ++ inst/doc/Specified_stations_for_a_range_of_years.Rmd | 51 inst/doc/Specified_stations_for_a_range_of_years.html | 446 +++---- inst/doc/Working_with_spatial_and_climate_data.R | 2 inst/doc/Working_with_spatial_and_climate_data.Rmd | 24 inst/doc/Working_with_spatial_and_climate_data.html | 396 +++---- inst/extdata/country_list.rda |binary inst/extdata/isd_history.rda |binary man/get_GSOD.Rd | 5 man/get_inventory.Rd |only man/nearest_stations.Rd | 6 man/reformat_GSOD.Rd | 5 man/update_station_list.Rd | 4 tests/testthat/test-get_GSOD.R | 18 tests/testthat/test-get_inventory.R |only tests/testthat/test-nearest_stations.R | 45 tests/testthat/test-process_gz.R | 10 tests/testthat/test-reformat_GSOD.R | 41 vignettes/GSODR.Rmd | 145 +- vignettes/Specified_stations_for_a_range_of_years.Rmd | 51 vignettes/Working_with_spatial_and_climate_data.Rmd | 24 vignettes/example_1.2-1.png |only 37 files changed, 1728 insertions(+), 1896 deletions(-)