Title: Structure for Organizing Monte Carlo Simulation Designs
Description: Provides tools to help safely and efficiently organize Monte Carlo simulations in R.
The package controls the structure and back-end of Monte Carlo simulations
by utilizing a general generate-analyse-summarise strategy. The functions provided control
common simulation issues such as re-simulating non-convergent results, support parallel
back-end and MPI distributed computations, save and restore temporary files,
aggregate results across independent nodes, and provide native support for debugging.
Author: Phil Chalmers [aut, cre],
Matthew Sigal [ctb]
Maintainer: Phil Chalmers <rphilip.chalmers@gmail.com>
Diff between SimDesign versions 1.7 dated 2017-08-14 and 1.8 dated 2017-10-29
SimDesign-1.7/SimDesign/R/generate.R |only SimDesign-1.7/SimDesign/inst/doc/SimDesign-vignettes.Rmd |only SimDesign-1.7/SimDesign/inst/doc/SimDesign-vignettes.html |only SimDesign-1.7/SimDesign/vignettes/SimDesign-vignettes.Rmd |only SimDesign-1.8/SimDesign/DESCRIPTION | 11 - SimDesign-1.8/SimDesign/MD5 | 100 ++++++++------ SimDesign-1.8/SimDesign/NAMESPACE | 4 SimDesign-1.8/SimDesign/R/Attach.R | 2 SimDesign-1.8/SimDesign/R/SimAnova.R | 2 SimDesign-1.8/SimDesign/R/SimClean.R | 2 SimDesign-1.8/SimDesign/R/SimFunctions.R | 2 SimDesign-1.8/SimDesign/R/SimResults.R | 2 SimDesign-1.8/SimDesign/R/SimShiny.R | 2 SimDesign-1.8/SimDesign/R/add_missing.R | 2 SimDesign-1.8/SimDesign/R/aggregate_simulations.R | 2 SimDesign-1.8/SimDesign/R/analysis.R | 15 +- SimDesign-1.8/SimDesign/R/functions.R | 7 SimDesign-1.8/SimDesign/R/rgenerate.R |only SimDesign-1.8/SimDesign/R/rtruncate.R |only SimDesign-1.8/SimDesign/R/runSimulation.R | 12 + SimDesign-1.8/SimDesign/R/subset.SimDesign.R | 2 SimDesign-1.8/SimDesign/R/summary_functions.R | 15 ++ SimDesign-1.8/SimDesign/build/vignette.rds |binary SimDesign-1.8/SimDesign/inst/doc/Catch_errors.R |only SimDesign-1.8/SimDesign/inst/doc/Catch_errors.Rmd |only SimDesign-1.8/SimDesign/inst/doc/Catch_errors.html |only SimDesign-1.8/SimDesign/inst/doc/Fixed_obj_fun.R |only SimDesign-1.8/SimDesign/inst/doc/Fixed_obj_fun.Rmd |only SimDesign-1.8/SimDesign/inst/doc/Fixed_obj_fun.html |only SimDesign-1.8/SimDesign/inst/doc/Saving-results.R |only SimDesign-1.8/SimDesign/inst/doc/Saving-results.Rmd |only SimDesign-1.8/SimDesign/inst/doc/Saving-results.html |only SimDesign-1.8/SimDesign/inst/doc/SimDesign-intro.R |only SimDesign-1.8/SimDesign/inst/doc/SimDesign-intro.Rmd |only SimDesign-1.8/SimDesign/inst/doc/SimDesign-intro.html |only SimDesign-1.8/SimDesign/man/Attach.Rd | 3 SimDesign-1.8/SimDesign/man/ECR.Rd | 3 SimDesign-1.8/SimDesign/man/EDR.Rd | 3 SimDesign-1.8/SimDesign/man/MAE.Rd | 3 SimDesign-1.8/SimDesign/man/RD.Rd | 3 SimDesign-1.8/SimDesign/man/RE.Rd | 3 SimDesign-1.8/SimDesign/man/RMSE.Rd | 3 SimDesign-1.8/SimDesign/man/SimAnova.Rd | 3 SimDesign-1.8/SimDesign/man/SimClean.Rd | 3 SimDesign-1.8/SimDesign/man/SimFunctions.Rd | 3 SimDesign-1.8/SimDesign/man/SimResults.Rd | 3 SimDesign-1.8/SimDesign/man/SimShiny.Rd | 3 SimDesign-1.8/SimDesign/man/add_missing.Rd | 3 SimDesign-1.8/SimDesign/man/aggregate_simulations.Rd | 3 SimDesign-1.8/SimDesign/man/bias.Rd | 3 SimDesign-1.8/SimDesign/man/rHeadrick.Rd | 4 SimDesign-1.8/SimDesign/man/rValeMaurelli.Rd | 4 SimDesign-1.8/SimDesign/man/rinvWishart.Rd |only SimDesign-1.8/SimDesign/man/rmgh.Rd | 4 SimDesign-1.8/SimDesign/man/rmvnorm.Rd |only SimDesign-1.8/SimDesign/man/rmvt.Rd |only SimDesign-1.8/SimDesign/man/rtruncate.Rd |only SimDesign-1.8/SimDesign/man/runSimulation.Rd | 14 + SimDesign-1.8/SimDesign/man/subset.SimDesign.Rd | 3 SimDesign-1.8/SimDesign/tests/tests/test-SimDesign.R | 28 ++- SimDesign-1.8/SimDesign/vignettes/Catch_errors.Rmd |only SimDesign-1.8/SimDesign/vignettes/Fixed_obj_fun.Rmd |only SimDesign-1.8/SimDesign/vignettes/Saving-results.Rmd |only SimDesign-1.8/SimDesign/vignettes/SimDesign-intro.Rmd |only 64 files changed, 208 insertions(+), 76 deletions(-)
Title: Easy Interface to Advanced PostgreSQL Features
Description: Allows ad hoc queries and reading and
writing data frames to and from a database.
Author: Timothy H. Keitt
Maintainer: Timothy H. Keitt <tkeitt@gmail.com>
Diff between rpg versions 1.5 dated 2017-02-08 and 1.6 dated 2017-10-29
rpg-1.5/rpg/src/get-libpq.R |only rpg-1.5/rpg/src/get-pgversion.R |only rpg-1.5/rpg/src/libpq-fe.h |only rpg-1.5/rpg/src/pg_config_ext.h |only rpg-1.5/rpg/src/postgres_ext.h |only rpg-1.6/rpg/DESCRIPTION | 12 +-- rpg-1.6/rpg/MD5 | 62 ++++++++--------- rpg-1.6/rpg/NAMESPACE | 3 rpg-1.6/rpg/R/RcppExports.R | 81 ++++++++++++----------- rpg-1.6/rpg/R/rpg.R | 39 ++++++----- rpg-1.6/rpg/R/utils.R | 37 +++------- rpg-1.6/rpg/cleanup |only rpg-1.6/rpg/configure | 50 +++++--------- rpg-1.6/rpg/man/async.Rd | 3 rpg-1.6/rpg/man/connection-utils.Rd | 7 -- rpg-1.6/rpg/man/connection.Rd | 1 rpg-1.6/rpg/man/copy.Rd | 7 -- rpg-1.6/rpg/man/cursor.Rd | 7 -- rpg-1.6/rpg/man/format-for-send.Rd | 3 rpg-1.6/rpg/man/misc.Rd | 7 -- rpg-1.6/rpg/man/path.Rd | 7 -- rpg-1.6/rpg/man/prepare.Rd | 1 rpg-1.6/rpg/man/psql.Rd | 7 -- rpg-1.6/rpg/man/query.Rd | 18 +++-- rpg-1.6/rpg/man/rpg-package.Rd | 11 +-- rpg-1.6/rpg/man/sql.Rd | 9 +- rpg-1.6/rpg/man/stack.Rd | 5 - rpg-1.6/rpg/man/stow.Rd | 13 +-- rpg-1.6/rpg/man/table-info.Rd | 11 +-- rpg-1.6/rpg/man/table-io.Rd | 13 ++- rpg-1.6/rpg/man/tracing.Rd | 5 - rpg-1.6/rpg/man/transactions.Rd | 1 rpg-1.6/rpg/src/Makevars.in | 1 rpg-1.6/rpg/src/RcppExports.cpp | 126 ++++++++++++++++++++++++------------ rpg-1.6/rpg/src/rpg.cpp | 7 +- 35 files changed, 285 insertions(+), 269 deletions(-)
Title: Make Dealing with Dates a Little Easier
Description: Functions to work with date-times and time-spans: fast and user
friendly parsing of date-time data, extraction and updating of components of
a date-time (years, months, days, hours, minutes, and seconds), algebraic
manipulation on date-time and time-span objects. The 'lubridate' package has
a consistent and memorable syntax that makes working with dates easy and
fun.
Author: Vitalie Spinu [aut, cre],
Garrett Grolemund [aut],
Hadley Wickham [aut],
Ian Lyttle [ctb],
Imanuel Constigan [ctb],
Jason Law [ctb],
Doug Mitarotonda [ctb],
Joseph Larmarange [ctb],
Jonathan Boiser [ctb],
Chel Hee Lee [ctb]
Maintainer: Vitalie Spinu <spinuvit@gmail.com>
Diff between lubridate versions 1.6.0 dated 2016-09-13 and 1.7.0 dated 2017-10-29
lubridate-1.6.0/lubridate/R/help.r |only lubridate-1.6.0/lubridate/man/DateUpdate.Rd |only lubridate-1.6.0/lubridate/man/quick_durations.Rd |only lubridate-1.6.0/lubridate/man/quick_periods.Rd |only lubridate-1.7.0/lubridate/DESCRIPTION | 76 - lubridate-1.7.0/lubridate/MD5 | 323 +++--- lubridate-1.7.0/lubridate/NAMESPACE | 17 lubridate-1.7.0/lubridate/NEWS.md | 56 + lubridate-1.7.0/lubridate/R/Dates.r | 2 lubridate-1.7.0/lubridate/R/POSIXt.r | 2 lubridate-1.7.0/lubridate/R/RcppExports.R |only lubridate-1.7.0/lubridate/R/accessors-date.R | 25 lubridate-1.7.0/lubridate/R/accessors-day.r | 95 + lubridate-1.7.0/lubridate/R/accessors-dst.r | 2 lubridate-1.7.0/lubridate/R/accessors-hour.r | 6 lubridate-1.7.0/lubridate/R/accessors-minute.r | 4 lubridate-1.7.0/lubridate/R/accessors-month.r | 44 lubridate-1.7.0/lubridate/R/accessors-quarter.r | 19 lubridate-1.7.0/lubridate/R/accessors-second.r | 4 lubridate-1.7.0/lubridate/R/accessors-tz.r | 22 lubridate-1.7.0/lubridate/R/accessors-week.r | 48 lubridate-1.7.0/lubridate/R/accessors-year.r | 37 lubridate-1.7.0/lubridate/R/coercion.r | 171 +-- lubridate-1.7.0/lubridate/R/constants.r | 48 lubridate-1.7.0/lubridate/R/data.r | 2 lubridate-1.7.0/lubridate/R/decimal-dates.r | 14 lubridate-1.7.0/lubridate/R/deprecated.r | 58 - lubridate-1.7.0/lubridate/R/difftimes.r | 28 lubridate-1.7.0/lubridate/R/durations.r | 167 +-- lubridate-1.7.0/lubridate/R/guess.r | 134 +- lubridate-1.7.0/lubridate/R/instants.r | 62 - lubridate-1.7.0/lubridate/R/intervals.r | 165 +-- lubridate-1.7.0/lubridate/R/ops-%m+%.r | 40 lubridate-1.7.0/lubridate/R/ops-addition.r | 76 - lubridate-1.7.0/lubridate/R/ops-compare.r | 49 lubridate-1.7.0/lubridate/R/ops-division.r | 73 - lubridate-1.7.0/lubridate/R/ops-integer-division.r | 2 lubridate-1.7.0/lubridate/R/ops-modulo.r | 10 lubridate-1.7.0/lubridate/R/ops-multiplication.r | 16 lubridate-1.7.0/lubridate/R/ops-subtraction.r | 10 lubridate-1.7.0/lubridate/R/package.r |only lubridate-1.7.0/lubridate/R/parse.r | 400 ++++--- lubridate-1.7.0/lubridate/R/periods.r | 286 ++--- lubridate-1.7.0/lubridate/R/pretty.r | 30 lubridate-1.7.0/lubridate/R/round.r | 218 ++-- lubridate-1.7.0/lubridate/R/stamp.r | 90 + lubridate-1.7.0/lubridate/R/time-zones.r | 154 ++ lubridate-1.7.0/lubridate/R/timespans.r | 94 - lubridate-1.7.0/lubridate/R/update.r | 119 +- lubridate-1.7.0/lubridate/R/util.r | 33 lubridate-1.7.0/lubridate/R/zzz.R |only lubridate-1.7.0/lubridate/README.md | 90 + lubridate-1.7.0/lubridate/build/vignette.rds |binary lubridate-1.7.0/lubridate/cleanup |only lubridate-1.7.0/lubridate/inst/cctz.sh |only lubridate-1.7.0/lubridate/inst/doc/lubridate.R | 3 lubridate-1.7.0/lubridate/inst/doc/lubridate.Rmd | 24 lubridate-1.7.0/lubridate/inst/doc/lubridate.html | 272 +---- lubridate-1.7.0/lubridate/man/DateCoercion.Rd | 1 lubridate-1.7.0/lubridate/man/DateTimeUpdate.Rd |only lubridate-1.7.0/lubridate/man/Deprecated.Rd | 26 lubridate-1.7.0/lubridate/man/Duration-class.Rd | 6 lubridate-1.7.0/lubridate/man/Interval-class.Rd | 6 lubridate-1.7.0/lubridate/man/Period-class.Rd | 26 lubridate-1.7.0/lubridate/man/Timespan-class.Rd | 6 lubridate-1.7.0/lubridate/man/am.Rd | 1 lubridate-1.7.0/lubridate/man/as.duration.Rd | 17 lubridate-1.7.0/lubridate/man/as.interval.Rd | 15 lubridate-1.7.0/lubridate/man/as.period.Rd | 19 lubridate-1.7.0/lubridate/man/as_date.Rd | 32 lubridate-1.7.0/lubridate/man/date.Rd | 7 lubridate-1.7.0/lubridate/man/date_decimal.Rd | 5 lubridate-1.7.0/lubridate/man/day.Rd | 53 - lubridate-1.7.0/lubridate/man/days_in_month.Rd | 3 lubridate-1.7.0/lubridate/man/decimal_date.Rd | 5 lubridate-1.7.0/lubridate/man/dst.Rd | 3 lubridate-1.7.0/lubridate/man/duration.Rd | 77 + lubridate-1.7.0/lubridate/man/figures |only lubridate-1.7.0/lubridate/man/fit_to_timeline.Rd | 33 lubridate-1.7.0/lubridate/man/force_tz.Rd | 59 - lubridate-1.7.0/lubridate/man/guess_formats.Rd | 7 lubridate-1.7.0/lubridate/man/hidden_aliases.Rd | 389 +++---- lubridate-1.7.0/lubridate/man/hms.Rd | 15 lubridate-1.7.0/lubridate/man/hour.Rd | 5 lubridate-1.7.0/lubridate/man/interval.Rd | 83 - lubridate-1.7.0/lubridate/man/is.Date.Rd | 3 lubridate-1.7.0/lubridate/man/is.POSIXt.Rd | 7 lubridate-1.7.0/lubridate/man/is.difftime.Rd | 5 lubridate-1.7.0/lubridate/man/is.instant.Rd | 5 lubridate-1.7.0/lubridate/man/is.timespan.Rd | 3 lubridate-1.7.0/lubridate/man/lakers.Rd | 3 lubridate-1.7.0/lubridate/man/leap_year.Rd | 1 lubridate-1.7.0/lubridate/man/local_time.Rd |only lubridate-1.7.0/lubridate/man/lubridate-package.Rd | 182 ++- lubridate-1.7.0/lubridate/man/make_datetime.Rd | 7 lubridate-1.7.0/lubridate/man/make_difftime.Rd | 7 lubridate-1.7.0/lubridate/man/minute.Rd | 3 lubridate-1.7.0/lubridate/man/month.Rd | 11 lubridate-1.7.0/lubridate/man/mplus.Rd | 51 lubridate-1.7.0/lubridate/man/now.Rd | 5 lubridate-1.7.0/lubridate/man/origin.Rd | 1 lubridate-1.7.0/lubridate/man/parse_date_time.Rd | 188 ++- lubridate-1.7.0/lubridate/man/period.Rd | 105 +- lubridate-1.7.0/lubridate/man/period_to_seconds.Rd | 10 lubridate-1.7.0/lubridate/man/pretty_dates.Rd | 1 lubridate-1.7.0/lubridate/man/quarter.Rd | 8 lubridate-1.7.0/lubridate/man/reclass_date.Rd | 1 lubridate-1.7.0/lubridate/man/reclass_timespan.Rd | 1 lubridate-1.7.0/lubridate/man/rollback.Rd | 1 lubridate-1.7.0/lubridate/man/round_date.Rd | 132 +- lubridate-1.7.0/lubridate/man/second.Rd | 3 lubridate-1.7.0/lubridate/man/stamp.Rd | 23 lubridate-1.7.0/lubridate/man/time_length.Rd | 17 lubridate-1.7.0/lubridate/man/timespan.Rd | 67 - lubridate-1.7.0/lubridate/man/today.Rd | 1 lubridate-1.7.0/lubridate/man/tz.Rd | 11 lubridate-1.7.0/lubridate/man/week.Rd | 25 lubridate-1.7.0/lubridate/man/with_tz.Rd | 7 lubridate-1.7.0/lubridate/man/within-interval.Rd | 3 lubridate-1.7.0/lubridate/man/year.Rd | 21 lubridate-1.7.0/lubridate/man/ymd.Rd | 38 lubridate-1.7.0/lubridate/man/ymd_hms.Rd | 48 lubridate-1.7.0/lubridate/src/Makevars |only lubridate-1.7.0/lubridate/src/RcppExports.cpp |only lubridate-1.7.0/lubridate/src/cctz |only lubridate-1.7.0/lubridate/src/constants.h | 10 lubridate-1.7.0/lubridate/src/datetime.c | 4 lubridate-1.7.0/lubridate/src/period.c | 56 - lubridate-1.7.0/lubridate/src/tparse.c | 54 - lubridate-1.7.0/lubridate/src/update.cpp |only lubridate-1.7.0/lubridate/src/utils.c | 27 lubridate-1.7.0/lubridate/src/utils.h | 11 lubridate-1.7.0/lubridate/tests/testthat/test-Dates.R | 14 lubridate-1.7.0/lubridate/tests/testthat/test-POSIXt.R | 25 lubridate-1.7.0/lubridate/tests/testthat/test-accessors.R | 262 +++-- lubridate-1.7.0/lubridate/tests/testthat/test-am-pm.R | 18 lubridate-1.7.0/lubridate/tests/testthat/test-daylight-savings.R | 124 +- lubridate-1.7.0/lubridate/tests/testthat/test-decimal-date.R | 19 lubridate-1.7.0/lubridate/tests/testthat/test-difftimes.R | 14 lubridate-1.7.0/lubridate/tests/testthat/test-durations.R | 88 + lubridate-1.7.0/lubridate/tests/testthat/test-guess.R | 2 lubridate-1.7.0/lubridate/tests/testthat/test-instants.R | 29 lubridate-1.7.0/lubridate/tests/testthat/test-intervals.R | 270 ++--- lubridate-1.7.0/lubridate/tests/testthat/test-namespace.R |only lubridate-1.7.0/lubridate/tests/testthat/test-ops-addition.R | 74 - lubridate-1.7.0/lubridate/tests/testthat/test-ops-compare.R | 9 lubridate-1.7.0/lubridate/tests/testthat/test-ops-division.R | 86 - lubridate-1.7.0/lubridate/tests/testthat/test-ops-integer-division.R | 28 lubridate-1.7.0/lubridate/tests/testthat/test-ops-modulo.R | 134 +- lubridate-1.7.0/lubridate/tests/testthat/test-ops-multiplication.R | 56 - lubridate-1.7.0/lubridate/tests/testthat/test-ops-subtraction.R | 68 - lubridate-1.7.0/lubridate/tests/testthat/test-parsers.R | 285 +++-- lubridate-1.7.0/lubridate/tests/testthat/test-periods.R | 49 lubridate-1.7.0/lubridate/tests/testthat/test-rollback.R | 6 lubridate-1.7.0/lubridate/tests/testthat/test-round.R | 293 +++-- lubridate-1.7.0/lubridate/tests/testthat/test-settors.R | 519 ++++------ lubridate-1.7.0/lubridate/tests/testthat/test-stamp.R | 81 - lubridate-1.7.0/lubridate/tests/testthat/test-timespans.R | 88 - lubridate-1.7.0/lubridate/tests/testthat/test-timezones.R | 80 + lubridate-1.7.0/lubridate/tests/testthat/test-update.R | 271 ++--- lubridate-1.7.0/lubridate/tests/testthat/test-utilities.R | 12 lubridate-1.7.0/lubridate/vignettes/lubridate.Rmd | 24 162 files changed, 4913 insertions(+), 3901 deletions(-)
Title: Network Diffusion Algorithms
Description: Implementation of network diffusion algorithms such as
heat diffusion or Markov random walks. Network diffusion algorithms generally
spread information in the form of node weights along the edges of a graph to other nodes.
These weights can for example be interpreted as temperature, an initial amount
of water, the activation of neurons in the brain, or the location of a random
surfer in the internet. The information (node weights) is iteratively propagated
to other nodes until a equilibrium state or stop criterion occurs.
Author: Simon Dirmeier [aut, cre]
Maintainer: Simon Dirmeier <simon.dirmeier@gmx.de>
Diff between diffusr versions 0.1.1 dated 2017-06-05 and 0.1.2 dated 2017-10-29
diffusr-0.1.1/diffusr/R/insulated_heat_process.R |only diffusr-0.1.1/diffusr/R/laplacian_heat_diffusion.R |only diffusr-0.1.1/diffusr/R/zzz.R |only diffusr-0.1.1/diffusr/man/insulated-diffusion-methods.Rd |only diffusr-0.1.1/diffusr/man/laplacian-diffusion-methods.Rd |only diffusr-0.1.1/diffusr/src/insulated_heat_diffusion.cpp |only diffusr-0.1.1/diffusr/src/laplacian_heat_diffusion.cpp |only diffusr-0.1.1/diffusr/tests/testthat/test_insulated_heat.R |only diffusr-0.1.1/diffusr/tests/testthat/test_laplacian_heat.R |only diffusr-0.1.2/diffusr/DESCRIPTION | 16 diffusr-0.1.2/diffusr/MD5 | 57 +- diffusr-0.1.2/diffusr/NAMESPACE | 3 diffusr-0.1.2/diffusr/R/RcppExports.R | 20 diffusr-0.1.2/diffusr/R/diffusr-package.R | 1 diffusr-0.1.2/diffusr/R/heat_diffusion.R |only diffusr-0.1.2/diffusr/R/mat_util.R | 6 diffusr-0.1.2/diffusr/R/mrw.R | 58 ++ diffusr-0.1.2/diffusr/R/neighbors.R | 2 diffusr-0.1.2/diffusr/R/util.R | 8 diffusr-0.1.2/diffusr/build/vignette.rds |binary diffusr-0.1.2/diffusr/inst/NEWS | 7 diffusr-0.1.2/diffusr/inst/doc/diffusr.R | 28 - diffusr-0.1.2/diffusr/inst/doc/diffusr.Rmd | 66 +-- diffusr-0.1.2/diffusr/inst/doc/diffusr.html | 80 ++- diffusr-0.1.2/diffusr/inst/fig |only diffusr-0.1.2/diffusr/inst/include/diffusr_RcppExports.h | 61 -- diffusr-0.1.2/diffusr/man/heat-diffusion-methods.Rd |only diffusr-0.1.2/diffusr/man/random-walk-methods.Rd | 39 + diffusr-0.1.2/diffusr/src/RcppExports.cpp | 279 +++++++------ diffusr-0.1.2/diffusr/src/heat_diffusion.cpp |only diffusr-0.1.2/diffusr/src/mat_util.cpp | 54 +- diffusr-0.1.2/diffusr/src/mrw.cpp | 81 ++- diffusr-0.1.2/diffusr/src/neighbors.cpp | 182 +++++--- diffusr-0.1.2/diffusr/tests/testthat/test_heat.R |only diffusr-0.1.2/diffusr/tests/testthat/test_mrw.R | 24 - diffusr-0.1.2/diffusr/vignettes/diffusr.Rmd | 66 +-- 36 files changed, 672 insertions(+), 466 deletions(-)
Title: Access Domains and Search Popular Websites
Description: Functions that allow for accessing domains and a number of search engines.
Author: Florian Simon Schaffner [aut, cre]
Maintainer: Florian Simon Schaffner <schaffner.florian@gmail.com>
Diff between websearchr versions 0.0.1 dated 2017-09-15 and 0.0.2 dated 2017-10-29
websearchr-0.0.1/websearchr/R/google.hits.R |only websearchr-0.0.1/websearchr/R/google.scholar.R |only websearchr-0.0.1/websearchr/R/rdrr.io.R |only websearchr-0.0.1/websearchr/man/google.hits.Rd |only websearchr-0.0.1/websearchr/man/google.scholar.Rd |only websearchr-0.0.1/websearchr/man/rdrr.io.Rd |only websearchr-0.0.2/websearchr/DESCRIPTION | 10 ++---- websearchr-0.0.2/websearchr/MD5 | 33 ++++++++++------------ websearchr-0.0.2/websearchr/NAMESPACE | 5 +-- websearchr-0.0.2/websearchr/NEWS.md |only websearchr-0.0.2/websearchr/R/crossref.R | 2 - websearchr-0.0.2/websearchr/R/duckduckgo.R | 2 - websearchr-0.0.2/websearchr/R/github.R | 2 - websearchr-0.0.2/websearchr/R/google.R | 2 - websearchr-0.0.2/websearchr/R/google_scholar.R |only websearchr-0.0.2/websearchr/R/rdocumentation.R | 2 - websearchr-0.0.2/websearchr/R/rdrr_io.R |only websearchr-0.0.2/websearchr/R/stackoverflow.R | 2 - websearchr-0.0.2/websearchr/R/twitter.R | 2 - websearchr-0.0.2/websearchr/R/wikipedia.R | 2 - websearchr-0.0.2/websearchr/README.md | 16 +++++++--- websearchr-0.0.2/websearchr/man/google_scholar.Rd |only websearchr-0.0.2/websearchr/man/rdrr_io.Rd |only 23 files changed, 41 insertions(+), 39 deletions(-)
Title: Solving Mixed Model Equations in R
Description: Structural multivariate-univariate linear mixed model solver for multiple random effects allowing the specification of variance-covariance structures for random effects and allowing the fit of heterogeneous variance models (Maier et al., 2015 <doi:10.1016/j.ajhg.2014.12.006>; Covarrubias-Pazaran, 2016 <doi:10.1371/journal.pone.0156744>). ML/REML estimates can be obtained using the Direct-Inversion Newton-Raphson, and Efficient Mixed Model Association algorithms. Designed for genomic prediction and genome wide association studies (GWAS), particularly focused in the p > n problem (more coefficients than observations) to include multiple relationship matrices or other covariance structures.
Author: Giovanny Covarrubias-Pazaran
Maintainer: Giovanny Covarrubias-Pazaran <cova_ruber@live.com.mx>
Diff between sommer versions 3.0 dated 2017-08-24 and 3.1 dated 2017-10-29
CHANGELOG | 28 +++ DESCRIPTION | 10 - MD5 | 83 +++++----- NAMESPACE | 2 R/AI.R | 2 R/D.mat.R | 30 ++- R/EM.R | 2 R/EMMA.R | 4 R/GWAS.R | 21 +- R/GWAS2.R | 6 R/NR.R | 26 +-- R/fill.design.R | 362 +++++++++++++++++++++----------------------- R/mmer.R | 36 ++-- R/mmer2.R | 79 +++++++-- R/pedtoK.R |only R/pin.R | 4 inst/doc/sommer.Rmd | 108 ++++--------- inst/doc/sommer.pdf |binary inst/doc/sommer.start.R | 11 + inst/doc/sommer.start.Rmd | 86 ++++++++-- inst/doc/sommer.start.pdf |binary man/CPdata.Rd | 212 ++++++++++++++++++------- man/D.mat.Rd | 2 man/ExpDesigns.Rd | 51 +++--- man/FDdata.Rd | 10 - man/GWAS.Rd | 6 man/GWAS2.Rd | 2 man/HDdata.Rd | 14 + man/MEMMA.Rd | 4 man/MNR.Rd | 6 man/adiag1.Rd | 1 man/figures |only man/mmer.Rd | 25 ++- man/mmer2.Rd | 30 ++- man/nna.Rd | 4 man/pedtoK.Rd |only man/sommer-package.Rd | 76 ++++++--- man/yates.oats.Rd | 2 vignettes/sommer.Rmd | 108 ++++--------- vignettes/sommer.html | 101 ++++-------- vignettes/sommer.start.Rmd | 86 ++++++++-- vignettes/sommer.start.html | 118 +++++++++++--- 42 files changed, 1048 insertions(+), 710 deletions(-)
Title: Lazy (Non-Standard) Evaluation
Description: An alternative approach to non-standard evaluation using
formulas. Provides a full implementation of LISP style 'quasiquotation',
making it easier to generate code with other code.
Author: Hadley Wickham [aut, cre],
RStudio [cph]
Maintainer: Hadley Wickham <hadley@rstudio.com>
Diff between lazyeval versions 0.2.0 dated 2016-06-13 and 0.2.1 dated 2017-10-29
lazyeval-0.2.0/lazyeval/vignettes/lazyeval.nb.html |only lazyeval-0.2.1/lazyeval/DESCRIPTION | 8 lazyeval-0.2.1/lazyeval/MD5 | 91 +++--- lazyeval-0.2.1/lazyeval/NAMESPACE | 10 lazyeval-0.2.1/lazyeval/NEWS.md | 13 lazyeval-0.2.1/lazyeval/R/expr.R | 6 lazyeval-0.2.1/lazyeval/R/f-capture.R | 4 lazyeval-0.2.1/lazyeval/R/f-interp.R | 3 lazyeval-0.2.1/lazyeval/R/formula.R | 20 - lazyeval-0.2.1/lazyeval/R/lazy-dots.R | 3 lazyeval-0.2.1/lazyeval/R/lazy.R | 3 lazyeval-0.2.1/lazyeval/R/lazyeval.R |only lazyeval-0.2.1/lazyeval/README.md | 2 lazyeval-0.2.1/lazyeval/build/vignette.rds |binary lazyeval-0.2.1/lazyeval/inst/doc/lazyeval-old.html | 114 +++----- lazyeval-0.2.1/lazyeval/inst/doc/lazyeval.html | 250 ++++++++---------- lazyeval-0.2.1/lazyeval/man/all_dots.Rd | 1 lazyeval-0.2.1/lazyeval/man/as.lazy.Rd | 1 lazyeval-0.2.1/lazyeval/man/as_name.Rd | 3 lazyeval-0.2.1/lazyeval/man/ast_.Rd | 3 lazyeval-0.2.1/lazyeval/man/auto_name.Rd | 1 lazyeval-0.2.1/lazyeval/man/call_modify.Rd | 1 lazyeval-0.2.1/lazyeval/man/call_new.Rd | 1 lazyeval-0.2.1/lazyeval/man/common_env.Rd | 1 lazyeval-0.2.1/lazyeval/man/expr_label.Rd | 5 lazyeval-0.2.1/lazyeval/man/f_capture.Rd | 3 lazyeval-0.2.1/lazyeval/man/f_eval.Rd | 6 lazyeval-0.2.1/lazyeval/man/f_interp.Rd | 4 lazyeval-0.2.1/lazyeval/man/f_list.Rd | 3 lazyeval-0.2.1/lazyeval/man/f_new.Rd | 1 lazyeval-0.2.1/lazyeval/man/f_rhs.Rd | 9 lazyeval-0.2.1/lazyeval/man/f_text.Rd | 3 lazyeval-0.2.1/lazyeval/man/f_unwrap.Rd | 1 lazyeval-0.2.1/lazyeval/man/function_new.Rd | 1 lazyeval-0.2.1/lazyeval/man/interp.Rd | 1 lazyeval-0.2.1/lazyeval/man/is_formula.Rd | 1 lazyeval-0.2.1/lazyeval/man/is_lang.Rd | 5 lazyeval-0.2.1/lazyeval/man/lazy_.Rd | 3 lazyeval-0.2.1/lazyeval/man/lazy_dots.Rd | 1 lazyeval-0.2.1/lazyeval/man/lazy_eval.Rd | 1 lazyeval-0.2.1/lazyeval/man/make_call.Rd | 1 lazyeval-0.2.1/lazyeval/man/missing_arg.Rd | 1 lazyeval-0.2.1/lazyeval/src/expr.c | 2 lazyeval-0.2.1/lazyeval/src/init.c |only lazyeval-0.2.1/lazyeval/src/lazy.c | 10 lazyeval-0.2.1/lazyeval/src/name.c | 14 - lazyeval-0.2.1/lazyeval/src/utils.c | 10 lazyeval-0.2.1/lazyeval/tests/testthat/test-formula.R | 4 48 files changed, 287 insertions(+), 342 deletions(-)
Title: Export 'grid' Graphics as SVG
Description: Functions to export graphics drawn with package grid to SVG
format. Additional functions provide access to SVG features that
are not available in standard R graphics, such as hyperlinks,
animation, filters, masks, clipping paths, and gradient and pattern fills.
Author: Paul Murrell [cre, aut],
Simon Potter [aut]
Maintainer: Paul Murrell <paul@stat.auckland.ac.nz>
Diff between gridSVG versions 1.5-1 dated 2017-05-04 and 1.6-0 dated 2017-10-29
DESCRIPTION | 6 MD5 | 19 +- R/devsvg.R | 254 ++++++++++++++++--------------------- R/griddev.R | 301 ++++++++++++++++++++++----------------------- R/svg.R | 112 ++++++++-------- R/svgStrings.R |only build/vignette.rds |binary inst/NEWS.Rd | 6 inst/doc/animation.pdf |binary inst/doc/extensibility.pdf |binary inst/doc/gridSVG.pdf |binary 11 files changed, 342 insertions(+), 356 deletions(-)
Title: Geographically Weighted Regression
Description: Functions for computing geographically weighted
regressions are provided, based on work by Chris
Brunsdon, Martin Charlton and Stewart Fotheringham.
Author: Roger Bivand [cre, aut] (0000-0003-2392-6140),
Danlin Yu [aut],
Tomoki Nakaya [ctb],
Miquel-Angel Garcia-Lopez [ctb]
Maintainer: Roger Bivand <Roger.Bivand@nhh.no>
Diff between spgwr versions 0.6-31 dated 2017-04-25 and 0.6-32 dated 2017-10-29
spgwr-0.6-31/spgwr/data/columbus.rda |only spgwr-0.6-31/spgwr/man/columbus.Rd |only spgwr-0.6-32/spgwr/ChangeLog | 341 +++++++++++++++++++++++++++++++ spgwr-0.6-32/spgwr/DESCRIPTION | 16 - spgwr-0.6-32/spgwr/MD5 | 32 +- spgwr-0.6-32/spgwr/NAMESPACE | 1 spgwr-0.6-32/spgwr/build/vignette.rds |binary spgwr-0.6-32/spgwr/inst/ChangeLog | 341 +++++++++++++++++++++++++++++++ spgwr-0.6-32/spgwr/inst/doc/GWR.R | 31 +- spgwr-0.6-32/spgwr/inst/doc/GWR.Rnw | 11 - spgwr-0.6-32/spgwr/inst/doc/GWR.pdf |binary spgwr-0.6-32/spgwr/man/LMZ.F3GWR.test.Rd | 18 - spgwr-0.6-32/spgwr/man/ggwr.Rd | 6 spgwr-0.6-32/spgwr/man/ggwr.sel.Rd | 6 spgwr-0.6-32/spgwr/man/gwr.Rd | 20 - spgwr-0.6-32/spgwr/man/gwr.cv.Rd | 10 spgwr-0.6-32/spgwr/man/gwr.morantest.Rd | 4 spgwr-0.6-32/spgwr/vignettes/GWR.Rnw | 11 - 18 files changed, 760 insertions(+), 88 deletions(-)
Title: Reliable Adaption of Big Data with R
Description: Methods to use 'dplyr' remote data sources ('SQL' databases,
'Spark' 2.0.0 and above) in a reliable "generic" fashion (generic meaning
user code works similarly on all such sources, without needing per-source
adaption).
Adds convenience functions to make such tasks more like
working with an in-memory R 'data.frame'.
Author: John Mount [aut, cre],
Nina Zumel [aut],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between replyr versions 0.5.4 dated 2017-10-19 and 0.8.2 dated 2017-10-29
DESCRIPTION | 18 MD5 | 67 ++- NAMESPACE | 10 NEWS.md | 12 R/bind_rows.R | 110 +++++ R/groupedApply.R | 12 R/land.R | 1 R/rowscols.R | 741 +++++++++++++++++++++++--------------- R/rowscols_old.R |only R/serviceName.R | 31 + README.md | 12 build/vignette.rds |binary inst/doc/DependencySorting.html | 28 - inst/doc/FluidData.R |only inst/doc/FluidData.Rmd |only inst/doc/FluidData.html |only inst/doc/NArm.html | 8 inst/doc/ParametricExample.html | 4 inst/doc/coalesce.html | 25 - inst/doc/joinController.html | 22 - inst/doc/letExample.html | 8 inst/doc/replyr.Rmd | 4 inst/doc/replyr.html | 14 inst/doc/summary.html | 8 man/bind_rowsQ.Rd |only man/buildPivotControlTable.Rd |only man/buildUnPivotControlTable.Rd |only man/dplyr_src_to_db_handle.Rd |only man/gapply.Rd | 11 man/grapes-land-grapes.Rd | 1 man/moveValuesToColumnsQ.Rd |only man/moveValuesToRowsQ.Rd |only man/replyr_bind_rows.Rd | 14 man/replyr_list_tables.Rd | 5 man/replyr_moveValuesToColumns.Rd | 26 - man/replyr_moveValuesToRows.Rd | 26 - man/replyr_split.Rd | 1 tests/testthat/test_pivot.R | 64 ++- vignettes/FluidData.Rmd |only vignettes/replyr.Rmd | 4 40 files changed, 803 insertions(+), 484 deletions(-)
Title: Interpreted String Literals
Description: An implementation of interpreted string literals, inspired by
Python's Literal String Interpolation <https://www.python.org/dev/peps/pep-0498/> and Docstrings
<https://www.python.org/dev/peps/pep-0257/> and Julia's Triple-Quoted String Literals
<https://docs.julialang.org/en/stable/manual/strings/#triple-quoted-string-literals>.
Author: Jim Hester [aut, cre]
Maintainer: Jim Hester <james.f.hester@gmail.com>
Diff between glue versions 1.1.1 dated 2017-06-21 and 1.2.0 dated 2017-10-29
.aspell |only DESCRIPTION | 14 +- MD5 | 39 +++++-- NAMESPACE | 4 NEWS.md | 34 +++++- R/glue.R | 82 ++++++++++++---- R/sql.R |only R/transformer.R |only R/utils.R | 42 ++++---- README.md | 89 ++++++++++++++++- build |only inst |only man/evaluate.Rd |only man/glue.Rd | 10 +- man/glue_sql.Rd |only man/trim.Rd | 2 src/glue.c | 204 ++++++++++++++++++++--------------------- src/trim.c | 62 ++++++------ tests/testthat/test-collapse.R | 8 + tests/testthat/test-glue.R | 142 ++++++++++++++++------------ tests/testthat/test-sql.R |only tests/testthat/test-trim.R |only vignettes |only 23 files changed, 470 insertions(+), 262 deletions(-)
Title: Fix Data and Create Report Tables from Different Objects
Description: Fixes data errors in numerical, factor and date variables, checks data quality, performs exploratory analysis and creates report tables from models and summaries.
Author: Victoria Fornes Ferrer, David Hervas Marin
Maintainer: David Hervas Marin <ddhervas@yahoo.es>
Diff between clickR versions 0.3.29 dated 2017-09-06 and 0.3.38 dated 2017-10-29
DESCRIPTION | 8 +++--- MD5 | 17 +++++++------ NEWS | 9 +++++++ R/coefplot.R | 2 - R/descriptive.R | 68 +++++++++++++++++++++++++++++++++++++++++++------------ R/report_model.R | 13 ++++++---- README.md | 4 +++ man/coefplot.Rd | 2 - man/fix.dates.Rd | 13 ++++++++-- man/fxd.Rd |only 10 files changed, 101 insertions(+), 35 deletions(-)
Title: Dynamic Estimation of Group-Level Opinion
Description: Fit dynamic group-level IRT and MRP models from individual or
aggregated item response data. This package handles common preprocessing
tasks and extends functions for inspecting results, poststratification, and
quick iteration over alternative models.
Author: James Dunham [aut, cre],
Devin Caughey [aut],
Christopher Warshaw [aut]
Maintainer: James Dunham <james@jdunham.io>
Diff between dgo versions 0.2.10 dated 2017-05-30 and 0.2.11 dated 2017-10-29
dgo-0.2.10/dgo/R/expand_rownames.r |only dgo-0.2.10/dgo/man/expand_rownames.Rd |only dgo-0.2.11/dgo/DESCRIPTION | 19 - dgo-0.2.11/dgo/MD5 | 98 +++---- dgo-0.2.11/dgo/NAMESPACE | 1 dgo-0.2.11/dgo/NEWS.md | 24 + dgo-0.2.11/dgo/R/aggregate_item_responses.r | 140 +++++----- dgo-0.2.11/dgo/R/assertions.r | 2 dgo-0.2.11/dgo/R/class-control.r | 20 + dgo-0.2.11/dgo/R/class-dgirt_fit.r | 4 dgo-0.2.11/dgo/R/class-dgirtin.r | 65 +++-- dgo-0.2.11/dgo/R/class-dgmrp_fit.r | 2 dgo-0.2.11/dgo/R/class-dgo_fit.r | 2 dgo-0.2.11/dgo/R/dgirt.r | 7 dgo-0.2.11/dgo/R/methods-control.r | 31 +- dgo-0.2.11/dgo/R/methods-dgirtfit-plot.r | 19 - dgo-0.2.11/dgo/R/methods-dgirtfit-poststratify.r | 64 ++-- dgo-0.2.11/dgo/R/methods-dgirtin.r | 30 -- dgo-0.2.11/dgo/R/restrict_input_data.r | 82 +++--- dgo-0.2.11/dgo/R/reweight_item_responses.r | 9 dgo-0.2.11/dgo/R/shape.r | 32 +- dgo-0.2.11/dgo/R/toy_dgirt_in.r | 2 dgo-0.2.11/dgo/R/toy_dgirtfit.r | 2 dgo-0.2.11/dgo/R/validate_input_data.r | 50 ++- dgo-0.2.11/dgo/README.md | 18 + dgo-0.2.11/dgo/data/toy_dgirt_in.rda |binary dgo-0.2.11/dgo/data/toy_dgirtfit.rda |binary dgo-0.2.11/dgo/inst/models/2017_01_04.stan | 218 ++++++++--------- dgo-0.2.11/dgo/inst/models/2017_01_04_singleissue.stan | 179 ++++++------- dgo-0.2.11/dgo/man/dgirt.Rd | 7 dgo-0.2.11/dgo/man/dgirt_fit-class.Rd | 2 dgo-0.2.11/dgo/man/dgirtfit-class.Rd | 2 dgo-0.2.11/dgo/man/dgirtin-class.Rd | 29 -- dgo-0.2.11/dgo/man/dgmrp_fit-class.Rd | 2 dgo-0.2.11/dgo/man/dgo_fit-class.Rd | 2 dgo-0.2.11/dgo/man/plot-method.Rd | 11 dgo-0.2.11/dgo/man/poststratify.Rd | 4 dgo-0.2.11/dgo/man/shape.Rd | 36 +- dgo-0.2.11/dgo/man/toy_dgirt_in.Rd | 2 dgo-0.2.11/dgo/man/toy_dgirtfit.Rd | 2 dgo-0.2.11/dgo/tests/testthat/dgirt_ret.Rds |binary dgo-0.2.11/dgo/tests/testthat/dgmrp_ret.Rds |binary dgo-0.2.11/dgo/tests/testthat/setup.r | 68 +++++ dgo-0.2.11/dgo/tests/testthat/test-assertions.r |only dgo-0.2.11/dgo/tests/testthat/test-dgirt.r |only dgo-0.2.11/dgo/tests/testthat/test-dgirtfit.r | 2 dgo-0.2.11/dgo/tests/testthat/test-dgirtin.r | 110 +++++++- dgo-0.2.11/dgo/tests/testthat/test-plot.r | 24 + dgo-0.2.11/dgo/tests/testthat/test-poststratify.r | 69 +++++ dgo-0.2.11/dgo/tests/testthat/test-raking.r | 46 +++ dgo-0.2.11/dgo/tests/testthat/test-restrict.r | 23 + dgo-0.2.11/dgo/tests/testthat/test-shape_misc.r | 66 ++++- 52 files changed, 1030 insertions(+), 597 deletions(-)
Title: Simple Fisheries Stock Assessment Methods
Description: A variety of simple fish stock assessment methods.
Detailed vignettes are available on the fishR website <http://derekogle.com/fishR/>.
Author: Derek Ogle [aut, cre]
Maintainer: Derek Ogle <derek@derekogle.com>
Diff between FSA versions 0.8.16 dated 2017-09-07 and 0.8.17 dated 2017-10-29
DESCRIPTION | 8 +-- MD5 | 18 ++++---- NEWS.md | 7 ++- R/dunnTest.R | 70 ++++++++++++++++++-------------- R/growthModels.R | 6 +- man/dunnTest.Rd | 56 +++++++++++++++---------- tests/testthat/EXS_dunnTest.R | 8 +-- tests/testthat/test_dunnTest_MSG.R | 1 tests/testthat/test_dunnTest_OUT.R | 12 ++++- tests/testthat/test_dunnTest_VALIDATE.R | 47 +++++++++++++++++---- 10 files changed, 149 insertions(+), 84 deletions(-)
Title: Categorical Regression Splines
Description: Regression splines that handle a mix of continuous and categorical (discrete) data often encountered in applied settings. I would like to gratefully acknowledge support from the Natural Sciences and Engineering Research Council of Canada (NSERC, <http://www.nserc-crsng.gc.ca>), the Social Sciences and Humanities Research Council of Canada (SSHRC, <http://www.sshrc-crsh.gc.ca>), and the Shared Hierarchical Academic Research Computing Network (SHARCNET, <https://www.sharcnet.ca>).
Author: Jeffrey S. Racine [aut, cre],
Zhenghua Nie [aut],
Brian D. Ripley [ctb] (stepCV.R)
Maintainer: Jeffrey S. Racine <racinej@mcmaster.ca>
Diff between crs versions 0.15-27 dated 2017-05-07 and 0.15-28 dated 2017-10-29
CHANGELOG | 8 ++ DESCRIPTION | 10 +-- MD5 | 46 +++++++-------- R/crs.R | 6 - R/crsiv.R | 2 R/crsivderiv.R | 2 R/glp.model.matrix.R | 136 +++++++++++++++++++++++++++++++++++++++------ R/krscvNOMAD.R | 2 R/np.regression.glp.R | 9 ++ R/zzz.R | 2 build/vignette.rds |binary inst/doc/crs.pdf |binary inst/doc/crs_faq.Rnw | 12 +++ inst/doc/crs_faq.pdf |binary inst/doc/spline_primer.pdf |binary man/crs.Rd | 2 man/crsiv.Rd | 2 man/crsivderiv.Rd | 2 man/krscvNOMAD.Rd | 2 man/npglpreg.Rd | 2 src/crs_init.c | 3 src/mgcv.c | 74 ++++++++++++++++++++++++ src/mgcv.h | 1 vignettes/crs_faq.Rnw | 12 +++ 24 files changed, 276 insertions(+), 59 deletions(-)
Title: Distance and Similarity Measures
Description: Provides an extensible framework for the efficient calculation of auto- and cross-proximities, along with implementations of the most popular ones.
Author: David Meyer [aut, cre],
Christian Buchta [aut]
Maintainer: David Meyer <David.Meyer@R-project.org>
Diff between proxy versions 0.4-17 dated 2017-02-01 and 0.4-19 dated 2017-10-29
DESCRIPTION | 6 MD5 | 18 - build/vignette.rds |binary inst/NEWS.Rd | 7 inst/doc/overview.pdf |binary src/apply.c | 40 +- src/distance.c | 661 ++++++----------------------------------------- src/util.c | 6 tests/distance.R | 2 tests/distance.Rout.save | 32 +- 10 files changed, 149 insertions(+), 623 deletions(-)
Title: Calculating Marginal Effects and Levels with Errors
Description: Calculate predicted levels and marginal effects,
using the delta method to calculate standard errors. This is an R-based
version of the 'margins' command from Stata.
Author: Alex Gold [aut],
Nat Olin [aut],
Annie Wang [aut, cre]
Maintainer: Annie Wang <anniejw6@gmail.com>
Diff between modmarg versions 0.6.0 dated 2017-08-13 and 0.9.0 dated 2017-10-29
modmarg-0.6.0/modmarg/tests/testthat/test_overall.R |only modmarg-0.6.0/modmarg/tests/testthat/test_se.R |only modmarg-0.6.0/modmarg/tests/testthat/test_weights.R |only modmarg-0.9.0/modmarg/DESCRIPTION | 16 - modmarg-0.9.0/modmarg/MD5 | 42 +- modmarg-0.9.0/modmarg/NAMESPACE | 6 modmarg-0.9.0/modmarg/NEWS.md | 9 modmarg-0.9.0/modmarg/R/calc_jacob.R | 13 modmarg-0.9.0/modmarg/R/data_clean.R | 31 ++ modmarg-0.9.0/modmarg/R/glm_marg.R |only modmarg-0.9.0/modmarg/R/ivreg_marg.R |only modmarg-0.9.0/modmarg/R/marg.R | 233 +++++++--------- modmarg-0.9.0/modmarg/R/output.R | 2 modmarg-0.9.0/modmarg/R/pred_se.R | 88 ++---- modmarg-0.9.0/modmarg/README.md | 2 modmarg-0.9.0/modmarg/build/vignette.rds |binary modmarg-0.9.0/modmarg/inst/doc/delta-method.html | 4 modmarg-0.9.0/modmarg/inst/doc/usage.html | 4 modmarg-0.9.0/modmarg/man/cvcov.Rd | 1 modmarg-0.9.0/modmarg/man/marg.Rd | 104 +------ modmarg-0.9.0/modmarg/man/marg.glm.Rd |only modmarg-0.9.0/modmarg/man/marg.ivreg.Rd |only modmarg-0.9.0/modmarg/man/margex.Rd | 1 modmarg-0.9.0/modmarg/man/pred_se.Rd |only modmarg-0.9.0/modmarg/tests/testthat/test_glm.R |only modmarg-0.9.0/modmarg/tests/testthat/test_glm_se.R |only modmarg-0.9.0/modmarg/tests/testthat/test_glm_weights.R |only modmarg-0.9.0/modmarg/tests/testthat/test_ivreg.R |only 28 files changed, 256 insertions(+), 300 deletions(-)
Title: Lexicons for Text Analysis
Description: A collection of lexical hash tables, dictionaries, and word lists.
Author: Tyler Rinker [aut, cre]
Maintainer: Tyler Rinker <tyler.rinker@gmail.com>
Diff between lexicon versions 0.3.1 dated 2017-04-10 and 0.4.1 dated 2017-10-29
DESCRIPTION | 25 ++++---- MD5 | 111 ++++++++++++++++++++++--------------- NEWS | 26 ++++++++ R/function_words.R | 2 R/hash_lemmas.R | 2 R/hash_valence_shifters.R | 22 ++++--- R/pos_df_irregular_nouns.R |only R/pos_unchanging_nouns.R |only R/profanity_alvarez.R |only R/profanity_arr_bad.R |only R/profanity_banned.R |only R/profanity_google.R |only R/profanity_von_ahn.R |only README.md | 70 +++++++++++++++++++---- data/common_names.rda |binary data/datalist | 7 ++ data/discourse_markers_alemany.rda |binary data/dodds_sentiment.rda |binary data/freq_first_names.rda |binary data/freq_last_names.rda |binary data/function_words.rda |binary data/grady_augmented.rda |binary data/hash_emoticons.rda |binary data/hash_grady_pos.rda |binary data/hash_lemmas.rda |binary data/hash_power.rda |binary data/hash_sentiment_huliu.rda |binary data/hash_sentiment_nrc.rda |binary data/hash_sentiment_sentiword.rda |binary data/hash_strength.rda |binary data/hash_syllable.rda |binary data/hash_valence_shifters.rda |binary data/key_abbreviation.rda |binary data/key_contractions.rda |binary data/key_grade.rda |binary data/key_rating.rda |binary data/nrc_emotions.rda |binary data/pos_action_verb.rda |binary data/pos_adverb.rda |binary data/pos_df_irregular_nouns.rda |only data/pos_df_pronouns.rda |binary data/pos_interjections.rda |binary data/pos_preposition.rda |binary data/pos_unchanging_nouns.rda |only data/profanity_alvarez.rda |only data/profanity_arr_bad.rda |only data/profanity_banned.rda |only data/profanity_google.rda |only data/profanity_von_ahn.rda |only data/sw_buckley_salton.rda |binary data/sw_dolch.rda |binary data/sw_fry_100.rda |binary data/sw_fry_1000.rda |binary data/sw_fry_200.rda |binary data/sw_fry_25.rda |binary data/sw_onix.rda |binary inst/CITATION | 4 - man/function_words.Rd | 2 man/hash_lemmas.Rd | 2 man/hash_valence_shifters.Rd | 22 ++++--- man/pos_df_irregular_nouns.Rd |only man/pos_unchanging_nouns.Rd |only man/profanity_alvarez.Rd |only man/profanity_arr_bad.Rd |only man/profanity_banned.Rd |only man/profanity_google.Rd |only man/profanity_von_ahn.Rd |only 67 files changed, 200 insertions(+), 95 deletions(-)
Title: Time Series Analysis Using the Innovations Algorithm
Description: Provides functions for modeling and forecasting time series data. Forecasting is based on the innovations algorithm. A description of the innovations algorithm can be found in the textbook "Introduction to Time Series and Forecasting" by Peter J. Brockwell and Richard A. Davis. <http://www.springer.com/us/book/9781475777505>.
Author: George Weigt
Maintainer: George Weigt <g808391@gmail.com>
Diff between itsmr versions 1.5 dated 2011-11-13 and 1.6 dated 2017-10-29
DESCRIPTION | 17 +++++++++-------- MD5 | 8 ++++---- NAMESPACE | 8 ++++++-- R/itsmr.R | 9 +++++---- man/itsmr-package.Rd | 21 ++++++++++----------- 5 files changed, 34 insertions(+), 29 deletions(-)
Title: 'linl' is not 'Letter'
Description: A 'LaTeX' Letter class for 'rmarkdown', using the
'pandoc-letter' template adapted for use with 'markdown'.
Author: Dirk Eddelbuettel and Aaron Wolen
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between linl versions 0.0.1 dated 2017-10-22 and 0.0.2 dated 2017-10-29
ChangeLog | 42 ++++++++++++++++++++ DESCRIPTION | 8 +-- MD5 | 26 ++++++------ R/linl.R | 26 +++++++++++- README.md | 29 ++++++++++--- build/vignette.rds |binary inst/NEWS.Rd | 11 +++++ inst/doc/linl.Rmd | 29 +++++++++---- inst/doc/linl.pdf |binary inst/rmarkdown/templates/pdf/resources/template.tex | 24 +++++------ inst/rmarkdown/templates/pdf/skeleton/skeleton.Rmd | 30 +++++++------- inst/rmarkdown/templates/pdf/template.yaml | 2 man/linl.Rd | 28 ++++++++++++- vignettes/linl.Rmd | 29 +++++++++---- 14 files changed, 210 insertions(+), 74 deletions(-)
Title: NPLS Regression with L1 Penalization
Description: Tools for performing variable selection in three-way data using N-PLS
in combination with L1 penalization. The N-PLS model (Rasmus Bro, 1996
<DOI:10.1002/(SICI)1099-128X(199601)10:1%3C47::AID-CEM400%3E3.0.CO;2-C>) is the
natural extension of PLS (Partial Least Squares) to N-way structures, and tries
to maximize the covariance between X and Y data arrays. The package also adds
variable selection through L1 penalization.
Author: David Hervas
Maintainer: David Hervas <ddhervas@yahoo.es>
Diff between sNPLS versions 0.2.7 dated 2017-09-30 and 0.3.0 dated 2017-10-29
DESCRIPTION | 6 - MD5 | 22 ++--- NAMESPACE | 4 + R/sNPLS_fit.R | 198 ++++++++++++++++++++++++++++++++++++-------------- README.md | 4 + data/bread.rda |binary man/plot_T.Rd | 9 ++ man/plot_U.Rd | 9 ++ man/plot_Wj.Rd | 9 ++ man/plot_Wk.Rd | 9 ++ man/plot_time.Rd | 4 - man/plot_variables.Rd | 4 - 12 files changed, 203 insertions(+), 75 deletions(-)
Title: Bayesian Variable Selection Methods for Multivariate Data
Description: Bayesian variable selection methods for data with multivariate responses and multiple covariates. The package contains implementations of multivariate Bayesian variable selection methods for continuous data and zero-inflated count data.
Author: Kyu Ha Lee, Mahlet G. Tadesse, Brent A. Coull, Jacqueline R. Starr
Maintainer: Kyu Ha Lee <klee@hsph.harvard.edu>
Diff between mBvs versions 1.0 dated 2015-12-05 and 1.1 dated 2017-10-29
mBvs-1.0/mBvs/data/simData.rda |only mBvs-1.0/mBvs/man/simData.Rd |only mBvs-1.1/mBvs/DESCRIPTION | 17 - mBvs-1.1/mBvs/MD5 | 38 +- mBvs-1.1/mBvs/NAMESPACE | 9 mBvs-1.1/mBvs/R/methods.R | 456 ++++++++++++++++++++++++++- mBvs-1.1/mBvs/R/mzipBvs.R |only mBvs-1.1/mBvs/data/simData_cont.rda |only mBvs-1.1/mBvs/data/simData_mzip.rda |only mBvs-1.1/mBvs/man/mBvs-package.Rd | 22 - mBvs-1.1/mBvs/man/methods.Rd | 16 mBvs-1.1/mBvs/man/mvnBvs.Rd | 19 - mBvs-1.1/mBvs/man/mzipBvs.Rd |only mBvs-1.1/mBvs/man/simData_cont.Rd |only mBvs-1.1/mBvs/man/simData_mzip.Rd |only mBvs-1.1/mBvs/src/MBVSfa.h | 19 - mBvs-1.1/mBvs/src/MBVSus.h | 26 - mBvs-1.1/mBvs/src/MBVSus_Updates.c | 1 mBvs-1.1/mBvs/src/Utilities.c | 456 ++++++++++++++++++++++++++- mBvs-1.1/mBvs/src/mzipBVS_general.c |only mBvs-1.1/mBvs/src/mzipBVS_general.h |only mBvs-1.1/mBvs/src/mzipBVS_general_Updates.c |only mBvs-1.1/mBvs/src/mzip_restricted1.c |only mBvs-1.1/mBvs/src/mzip_restricted1.h |only mBvs-1.1/mBvs/src/mzip_restricted1_Updates.c |only mBvs-1.1/mBvs/src/mzip_restricted2.c |only mBvs-1.1/mBvs/src/mzip_restricted2.h |only mBvs-1.1/mBvs/src/mzip_restricted2_Updates.c |only mBvs-1.1/mBvs/src/registerDynamicSymbol.c |only 29 files changed, 977 insertions(+), 102 deletions(-)