Title: 'fastText' Wrapper for Text Classification and Word
Representation
Description: Learning text representations and text classifiers may rely
on the same simple and efficient approach. 'fastText' is an open-source, free,
lightweight library that allows users to perform both tasks.
It transforms text into continuous vectors that can later
be used on many language related task.
It works on standard, generic hardware (no 'GPU' required).
It also includes model size reduction feature.
'fastText' original source code is available
at <https://github.com/facebookresearch/fastText>.
Author: Michaël Benesty [aut, cre, cph],
Facebook, Inc [cph]
Maintainer: Michaël Benesty <michael@benesty.fr>
Diff between fastrtext versions 0.2.3 dated 2017-11-10 and 0.2.4 dated 2017-12-09
fastrtext-0.2.3/fastrtext/src/fasttext_wrapper.h |only fastrtext-0.2.4/fastrtext/DESCRIPTION | 12 fastrtext-0.2.4/fastrtext/MD5 | 67 +- fastrtext-0.2.4/fastrtext/NAMESPACE | 2 fastrtext-0.2.4/fastrtext/NEWS.md | 8 fastrtext-0.2.4/fastrtext/R/API.R | 50 + fastrtext-0.2.4/fastrtext/build/vignette.rds |binary fastrtext-0.2.4/fastrtext/inst/doc/list_commands.html | 4 fastrtext-0.2.4/fastrtext/inst/doc/supervised_learning.html | 46 - fastrtext-0.2.4/fastrtext/inst/doc/unsupervised_learning.html | 120 ++-- fastrtext-0.2.4/fastrtext/man/add_tags.Rd |only fastrtext-0.2.4/fastrtext/man/get_analogies.Rd | 2 fastrtext-0.2.4/fastrtext/man/get_sentence_representation.Rd |only fastrtext-0.2.4/fastrtext/src/Makevars | 2 fastrtext-0.2.4/fastrtext/src/fastrtext.cpp | 83 +-- fastrtext-0.2.4/fastrtext/src/fasttext/args.cc | 163 +++--- fastrtext-0.2.4/fastrtext/src/fasttext/args.h | 44 - fastrtext-0.2.4/fastrtext/src/fasttext/dictionary.cc | 15 fastrtext-0.2.4/fastrtext/src/fasttext/dictionary.h | 7 fastrtext-0.2.4/fastrtext/src/fasttext/fasttext.cc | 257 +++++----- fastrtext-0.2.4/fastrtext/src/fasttext/fasttext.h | 148 +++-- fastrtext-0.2.4/fastrtext/src/fasttext/main.cc | 23 fastrtext-0.2.4/fastrtext/src/fasttext/matrix.cc | 8 fastrtext-0.2.4/fastrtext/src/fasttext/matrix.h | 5 fastrtext-0.2.4/fastrtext/src/fasttext/model.cc | 75 +- fastrtext-0.2.4/fastrtext/src/fasttext/model.h | 19 fastrtext-0.2.4/fastrtext/src/fasttext/productquantizer.cc | 1 fastrtext-0.2.4/fastrtext/src/fasttext/productquantizer.h | 7 fastrtext-0.2.4/fastrtext/src/fasttext/qmatrix.h | 7 fastrtext-0.2.4/fastrtext/src/fasttext/real.h | 5 fastrtext-0.2.4/fastrtext/src/fasttext/utils.h | 13 fastrtext-0.2.4/fastrtext/src/fasttext/vector.h | 5 fastrtext-0.2.4/fastrtext/src/main.h | 5 fastrtext-0.2.4/fastrtext/src/r_compliance.h | 5 fastrtext-0.2.4/fastrtext/tests/testthat/test-supervised.R | 12 fastrtext-0.2.4/fastrtext/tests/testthat/test-unsupervised.R | 10 36 files changed, 672 insertions(+), 558 deletions(-)
Title: Parse ThermoFisher MSF Files and Estimate Protein Abundances
Description: Provides functions for parsing ThermoFisher MSF files produced by Proteome Discoverer 1.4.x (see <https://thermofisher.com> for more information). This package makes it easy to view individual peptide information, including peak areas, and to map peptides to locations within the parent protein sequence. This package also estimates protein abundances from peak areas and across multiple technical replicates. The author of this package is not affiliated with ThermoFisher Scientific in any way.
Author: Benjamin Jack [aut, cre]
Maintainer: Benjamin Jack <benjamin.r.jack@gmail.com>
Diff between parsemsf versions 0.1.0 dated 2017-01-24 and 0.1.1 dated 2017-12-09
DESCRIPTION | 16 - MD5 | 38 +- NEWS.md | 3 R/make_area_table.R | 5 R/make_pep_table.R | 13 R/map_peptides.R | 5 R/parsemsf.R | 2 README.md | 14 - build/vignette.rds |binary inst/doc/introduction.R | 6 inst/doc/introduction.Rmd | 50 ++- inst/doc/introduction.html | 624 +++++++++++++++++++++++++++++---------------- man/make_area_table.Rd | 5 man/make_pep_table.Rd | 7 man/map_peptides.Rd | 7 man/merge_top_peptides.Rd | 1 man/parsemsf.Rd | 5 man/parsemsf_example.Rd | 1 man/quantitate.Rd | 1 vignettes/introduction.Rmd | 50 ++- 20 files changed, 562 insertions(+), 291 deletions(-)
Title: Utility Functions for Exploratory Factor Analysis
Description: A number of utility function for exploratory factor analysis
are included in this package. In particular, it computes standard errors for
parameter estimates and factor correlations under a variety of conditions.
Author: Guangjian Zhang, Ge Jiang, Minami Hattori, Lauren Trichtinger
Maintainer: Guangjian Zhang <gzhang3@nd.edu>
Diff between EFAutilities versions 1.1.1 dated 2017-11-06 and 1.2.1 dated 2017-12-09
EFAutilities-1.1.1/EFAutilities/R/OblqDerivatives20170525.R |only EFAutilities-1.1.1/EFAutilities/R/efa20170816_c.R |only EFAutilities-1.1.1/EFAutilities/R/oblqSE20170526.R |only EFAutilities-1.1.1/EFAutilities/R/xpstQ20161129.R |only EFAutilities-1.2.1/EFAutilities/DESCRIPTION | 8 EFAutilities-1.2.1/EFAutilities/MD5 | 16 EFAutilities-1.2.1/EFAutilities/NEWS.md | 3 EFAutilities-1.2.1/EFAutilities/R/OblqDerivatives20171128_c.R |only EFAutilities-1.2.1/EFAutilities/R/efa20171208_c.R |only EFAutilities-1.2.1/EFAutilities/R/oblqSE20171128_c.R |only EFAutilities-1.2.1/EFAutilities/R/xpstQ20171128_c.R |only EFAutilities-1.2.1/EFAutilities/README.md | 8 EFAutilities-1.2.1/EFAutilities/man/efa.Rd | 452 +++++----- 13 files changed, 246 insertions(+), 241 deletions(-)
Title: Run 'roxygen2' on (Chunks of) Single Code Files
Description: Have you ever been tempted to create 'roxygen2'-style documentation
comments for one of your functions that was not part of one of your
packages (yet)?
This is exactly what this package is about: running 'roxygen2' on
(chunks of) a single code file.
Author: Andreas Dominik Cullmann [aut, cre]
Maintainer: Andreas Dominik Cullmann <adc-r@arcor.de>
Diff between document versions 2.1.0 dated 2017-08-18 and 2.2.0 dated 2017-12-09
DESCRIPTION | 9 +++++---- MD5 | 24 ++++++++++++------------ NEWS.md | 9 +++++++++ R/package_functions.R | 10 +++++++--- R/utils.R | 31 ++++++++++++++++++++----------- inst/doc/Introduction_to_document.R | 28 ++++++---------------------- inst/doc/Introduction_to_document.Rmd | 27 ++++++++++----------------- inst/doc/Introduction_to_document.html | 27 +++++++++++++-------------- inst/tests/testthat/test_basic.R | 5 +++-- man/alter_description_file.Rd | 7 ++++++- man/clean_description_file.Rd | 3 ++- tests/testthat/test_basic.R | 5 +++-- vignettes/Introduction_to_document.Rmd | 27 ++++++++++----------------- 13 files changed, 106 insertions(+), 106 deletions(-)
Title: Financial and Actuarial Mathematics for Life Contingencies
Description: Classes and methods that allow the user to manage life table,
actuarial tables (also multiple decrements tables). Moreover, functions to easily
perform demographic, financial and actuarial mathematics on life contingencies
insurances calculations are contained therein.
Author: Giorgio Alfredo Spedicato [cre,aut], Reinhold Kainhofer [ctb], Kevin J.
Owens [ctb], Christophe Dutang [ctb], Ernesto Schirmacher[ctb], Gian Paolo Clemente [ctb]
Maintainer: Giorgio Alfredo Spedicato <spedicato_giorgio@yahoo.it>
Diff between lifecontingencies versions 1.3.1 dated 2017-09-29 and 1.3.2 dated 2017-12-09
lifecontingencies-1.3.1/lifecontingencies/inst/doc/pensionfunding.R |only lifecontingencies-1.3.1/lifecontingencies/inst/doc/pensionfunding.Rmd |only lifecontingencies-1.3.1/lifecontingencies/inst/doc/pensionfunding.pdf |only lifecontingencies-1.3.2/lifecontingencies/ChangeLog | 2 lifecontingencies-1.3.2/lifecontingencies/DESCRIPTION | 8 lifecontingencies-1.3.2/lifecontingencies/MD5 | 21 +- lifecontingencies-1.3.2/lifecontingencies/NEWS | 6 lifecontingencies-1.3.2/lifecontingencies/build/vignette.rds |binary lifecontingencies-1.3.2/lifecontingencies/inst/doc/an_introduction_to_lifecontingencies_package.pdf |binary lifecontingencies-1.3.2/lifecontingencies/inst/doc/introToLifecontingencies.pdf |binary lifecontingencies-1.3.2/lifecontingencies/inst/doc/mortality_projection.pdf |binary lifecontingencies-1.3.2/lifecontingencies/man/lifecontingencies-package.Rd | 4 lifecontingencies-1.3.2/lifecontingencies/vignettes/pensionfunding.Rmd | 86 +++++++--- 13 files changed, 83 insertions(+), 44 deletions(-)
More information about lifecontingencies at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-09-07 1.32
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-07-19 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-11-24 2.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-01-30 0.4
2015-01-28 0.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-11-14 1.0
Title: Statistical Tools for Topological Data Analysis
Description: Tools for the statistical analysis of persistent homology and for density clustering. For that, this package provides an R interface for the efficient algorithms of the C++ libraries GUDHI, Dionysus, and PHAT.
Author: Brittany T. Fasy, Jisu Kim, Fabrizio Lecci, Clement Maria, Vincent Rouvreau. The included GUDHI is authored by Clement Maria, Dionysus by Dmitriy Morozov, and PHAT by Ulrich Bauer, Michael Kerber, and Jan Reininghaus.
Maintainer: Jisu Kim <jisuk1@andrew.cmu.edu>
Diff between TDA versions 1.5.1 dated 2017-04-27 and 1.6 dated 2017-12-09
DESCRIPTION | 8 MD5 | 118 - NAMESPACE | 8 NEWS | 10 R/RcppExports.R | 52 R/alphaComplexDiag.R | 68 R/alphaComplexFiltration.R |only R/alphaShapeDiag.R | 61 R/alphaShapeFiltration.R |only R/bootstrapDiagram.R | 13 R/filtrationDiag.R |only R/funFiltration.R |only R/gridDiag.R | 21 R/gridFiltration.R |only R/kde.R | 10 R/maxPersistence.R | 9 R/plot.diagram.R | 30 R/ripsDiag.R | 53 R/ripsFiltration.R |only build/vignette.rds |binary inst/doc/article.R | 1117 +++++++------- inst/doc/article.Rnw | 2291 +++++++++++++++--------------- inst/doc/article.pdf |binary man/TDA-internal.Rd | 4 man/TDA-package.Rd | 4 man/alphaComplexDiag.Rd | 45 man/alphaComplexFiltration.Rd |only man/alphaShapeDiag.Rd | 32 man/alphaShapeFiltration.Rd |only man/bootstrapBand.Rd | 5 man/bootstrapDiagram.Rd | 12 man/clusterTree.Rd | 5 man/filtrationDiag.Rd |only man/funFiltration.Rd |only man/gridDiag.Rd | 23 man/gridFiltration.Rd |only man/hausdInterval.Rd | 5 man/kde.Rd | 7 man/landscape.Rd | 5 man/maxPersistence.Rd | 14 man/multipBootstrap.Rd | 4 man/plot.clusterTree.Rd | 3 man/plot.diagram.Rd | 7 man/plot.maxPersistence.Rd | 4 man/ripsDiag.Rd | 20 man/ripsFiltration.Rd |only man/silhouette.Rd | 5 src/RcppExports.cpp | 120 + src/alphaComplex.h |only src/alphaShape.h |only src/boost/archive |only src/boost/serialization/binary_object.hpp | 158 +- src/boost/serialization/singleton.hpp |only src/diag.cpp | 956 +++--------- src/dtm.h |only src/grid.h |only src/init.c | 50 src/kde.h |only src/rips.h |only src/tdautils/cgalUtils.h | 3 src/tdautils/dionysusUtils.h | 258 ++- src/tdautils/filtrationDiag.h |only src/tdautils/filtrationUtils.h |only src/tdautils/gridUtils.h | 238 +-- src/tdautils/gudhiUtils.h | 363 ++++ src/tdautils/kernelUtils.h | 237 +-- src/tdautils/phatUtils.h | 185 +- src/tdautils/ripsArbit.h | 2 src/tdautils/ripsL2.h | 2 src/tdautils/typecastUtils.h | 551 +++++++ vignettes/article.Rnw | 2291 +++++++++++++++--------------- 71 files changed, 5410 insertions(+), 4077 deletions(-)
Title: An Analysis Toolbox for Hermitian Positive Definite Matrices
Description: An implementation of data analysis tools for samples of symmetric or
Hermitian positive definite matrices, such as collections of covariance matrices
or spectral density matrices. The tools in this package can be used to perform (i)
intrinsic manifold wavelet regression and clustering for curves (1D) or surfaces (2D)
of Hermitian positive definite matrices, and (ii) exploratory data analysis and inference
for samples of (curves of) Hermitian positive definite matrices by means of intrinsic manifold
data depth and manifold rank-based hypothesis tests.
Author: Joris Chau [aut, cre]
Maintainer: Joris Chau <j.chau@uclouvain.be>
Diff between pdSpecEst versions 1.1.1 dated 2017-07-02 and 1.2.0 dated 2017-12-09
pdSpecEst-1.1.1/pdSpecEst/R/arma.R |only pdSpecEst-1.1.1/pdSpecEst/R/basis.R |only pdSpecEst-1.1.1/pdSpecEst/R/goldenSection.R |only pdSpecEst-1.1.1/pdSpecEst/man/InvWavTransf.Rd |only pdSpecEst-1.1.1/pdSpecEst/man/KarchMean.Rd |only pdSpecEst-1.1.1/pdSpecEst/man/WavTransf.Rd |only pdSpecEst-1.1.1/pdSpecEst/man/pdSpecClust.Rd |only pdSpecEst-1.1.1/pdSpecEst/src/Chol.cpp |only pdSpecEst-1.1.1/pdSpecEst/src/E_coeff.cpp |only pdSpecEst-1.1.1/pdSpecEst/src/E_coeff_inv.cpp |only pdSpecEst-1.1.1/pdSpecEst/src/Expm.cpp |only pdSpecEst-1.1.1/pdSpecEst/src/Logm.cpp |only pdSpecEst-1.1.1/pdSpecEst/src/Mid.cpp |only pdSpecEst-1.1.1/pdSpecEst/src/NormF.cpp |only pdSpecEst-1.1.1/pdSpecEst/src/RiemmDist.cpp |only pdSpecEst-1.1.1/pdSpecEst/src/SolveMid.cpp |only pdSpecEst-1.1.1/pdSpecEst/src/Sqrt.cpp |only pdSpecEst-1.1.1/pdSpecEst/src/iSqrt.cpp |only pdSpecEst-1.1.1/pdSpecEst/src/pdSpecEst_init.c |only pdSpecEst-1.1.1/pdSpecEst/tests/testthat/test-depth_ranktests.R |only pdSpecEst-1.2.0/pdSpecEst/DESCRIPTION | 23 pdSpecEst-1.2.0/pdSpecEst/MD5 | 128 +- pdSpecEst-1.2.0/pdSpecEst/NAMESPACE | 33 pdSpecEst-1.2.0/pdSpecEst/NEWS.md | 17 pdSpecEst-1.2.0/pdSpecEst/R/RcppExports.R | 119 +- pdSpecEst-1.2.0/pdSpecEst/R/benchmark.R |only pdSpecEst-1.2.0/pdSpecEst/R/cluster.R | 587 +++++++-- pdSpecEst-1.2.0/pdSpecEst/R/depth.R | 156 +- pdSpecEst-1.2.0/pdSpecEst/R/dist.R | 113 - pdSpecEst-1.2.0/pdSpecEst/R/estimation.R | 592 +++++++--- pdSpecEst-1.2.0/pdSpecEst/R/examples.R |only pdSpecEst-1.2.0/pdSpecEst/R/impute.R | 246 +++- pdSpecEst-1.2.0/pdSpecEst/R/inference.R |only pdSpecEst-1.2.0/pdSpecEst/R/invwavtrans.R | 313 ++++- pdSpecEst-1.2.0/pdSpecEst/R/karchMean.R | 64 - pdSpecEst-1.2.0/pdSpecEst/R/pdSpecEst.R |only pdSpecEst-1.2.0/pdSpecEst/R/pgram.R | 205 ++- pdSpecEst-1.2.0/pdSpecEst/R/polynomial.R |only pdSpecEst-1.2.0/pdSpecEst/R/ranktests.R | 39 pdSpecEst-1.2.0/pdSpecEst/R/sysdata.rda |binary pdSpecEst-1.2.0/pdSpecEst/R/wavtrans.R | 362 +++++- pdSpecEst-1.2.0/pdSpecEst/README.md | 12 pdSpecEst-1.2.0/pdSpecEst/build/vignette.rds |binary pdSpecEst-1.2.0/pdSpecEst/inst/doc/depth_ranktests.R | 32 pdSpecEst-1.2.0/pdSpecEst/inst/doc/depth_ranktests.Rmd | 63 - pdSpecEst-1.2.0/pdSpecEst/inst/doc/depth_ranktests.html | 121 +- pdSpecEst-1.2.0/pdSpecEst/inst/doc/wavelet_est_clust.R | 292 ++++ pdSpecEst-1.2.0/pdSpecEst/inst/doc/wavelet_est_clust.Rmd | 438 ++++++- pdSpecEst-1.2.0/pdSpecEst/inst/doc/wavelet_est_clust.html | 373 ++++-- pdSpecEst-1.2.0/pdSpecEst/man/Expm.Rd | 2 pdSpecEst-1.2.0/pdSpecEst/man/H.coeff.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/InvWavTransf1D.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/InvWavTransf2D.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/Logm.Rd | 2 pdSpecEst-1.2.0/pdSpecEst/man/Mid.Rd | 2 pdSpecEst-1.2.0/pdSpecEst/man/ParTrans.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/WavTransf1D.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/WavTransf2D.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/pdCART.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/pdConfInt1D.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/pdDepth.Rd | 28 pdSpecEst-1.2.0/pdSpecEst/man/pdDist.Rd | 4 pdSpecEst-1.2.0/pdSpecEst/man/pdMean.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/pdNeville.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/pdPgram.Rd | 52 pdSpecEst-1.2.0/pdSpecEst/man/pdPgram2D.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/pdPolynomial.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/pdRankTests.Rd | 19 pdSpecEst-1.2.0/pdSpecEst/man/pdSpecClust1D.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/pdSpecClust2D.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/pdSpecEst.Rd | 89 - pdSpecEst-1.2.0/pdSpecEst/man/pdSpecEst1D.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/pdSpecEst2D.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/pdSplineReg.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/rARMA.Rd | 4 pdSpecEst-1.2.0/pdSpecEst/man/rExamples.Rd |only pdSpecEst-1.2.0/pdSpecEst/man/rExamples2D.Rd |only pdSpecEst-1.2.0/pdSpecEst/src/Makevars | 13 pdSpecEst-1.2.0/pdSpecEst/src/Makevars.win | 14 pdSpecEst-1.2.0/pdSpecEst/src/RcppExports.cpp | 172 +- pdSpecEst-1.2.0/pdSpecEst/src/Tools.cpp |only pdSpecEst-1.2.0/pdSpecEst/src/Transform.cpp |only pdSpecEst-1.2.0/pdSpecEst/src/arma.cpp | 1 pdSpecEst-1.2.0/pdSpecEst/src/kMean.cpp | 3 pdSpecEst-1.2.0/pdSpecEst/tests/testthat/test-estimation.R | 205 ++- pdSpecEst-1.2.0/pdSpecEst/tests/testthat/test-geometry.R | 92 + pdSpecEst-1.2.0/pdSpecEst/vignettes/depth_ranktests.Rmd | 63 - pdSpecEst-1.2.0/pdSpecEst/vignettes/wavelet_est_clust.Rmd | 438 ++++++- 88 files changed, 4165 insertions(+), 1366 deletions(-)
Title: Time Series Clustering Along with Optimizations for the Dynamic
Time Warping Distance
Description: Time series clustering along with optimized techniques related
to the Dynamic Time Warping distance and its corresponding lower bounds.
Implementations of partitional, hierarchical, fuzzy, k-Shape and TADPole
clustering are available. Functionality can be easily extended with
custom distance measures and centroid definitions. Implementations of
DTW barycenter averaging and a distance based on global alignment kernels
are also provided. All included distance functions have custom loops
optimized for the calculation of cross-distance matrices, including
parallelization support. Several cluster validity indices are included.
Author: Alexis Sarda-Espinosa
Maintainer: Alexis Sarda <alexis.sarda@gmail.com>
Diff between dtwclust versions 4.1.0 dated 2017-09-11 and 5.0.0 dated 2017-12-09
dtwclust-4.1.0/dtwclust/R/all-cent.R |only dtwclust-4.1.0/dtwclust/R/create-dtwclust.R |only dtwclust-4.1.0/dtwclust/R/ddist.R |only dtwclust-4.1.0/dtwclust/R/dtwclust-classes.R |only dtwclust-4.1.0/dtwclust/R/dtwclust-methods.R |only dtwclust-4.1.0/dtwclust/R/dtwclust.R |only dtwclust-4.1.0/dtwclust/R/fuzzy.R |only dtwclust-4.1.0/dtwclust/R/partitional.R |only dtwclust-4.1.0/dtwclust/R/tsclust-classes.R |only dtwclust-4.1.0/dtwclust/R/tsclust-methods.R |only dtwclust-4.1.0/dtwclust/inst/COPYRIGHT.txt |only dtwclust-4.1.0/dtwclust/man/clusterSim.Rd |only dtwclust-4.1.0/dtwclust/man/create_dtwclust.Rd |only dtwclust-4.1.0/dtwclust/man/dtwclust-class.Rd |only dtwclust-4.1.0/dtwclust/man/dtwclust-deprecated.Rd |only dtwclust-4.1.0/dtwclust/man/dtwclust-methods.Rd |only dtwclust-4.1.0/dtwclust/man/dtwclust.Rd |only dtwclust-4.1.0/dtwclust/man/dtwclustControl-class.Rd |only dtwclust-4.1.0/dtwclust/man/dtwclustFamily-class.Rd |only dtwclust-4.1.0/dtwclust/man/randIndex.Rd |only dtwclust-5.0.0/dtwclust/DESCRIPTION | 37 dtwclust-5.0.0/dtwclust/MD5 | 199 dtwclust-5.0.0/dtwclust/NAMESPACE | 38 dtwclust-5.0.0/dtwclust/R/DBA.R | 307 dtwclust-5.0.0/dtwclust/R/Distmat.R | 198 dtwclust-5.0.0/dtwclust/R/GAK.R | 697 - dtwclust-5.0.0/dtwclust/R/NCCc.R | 59 dtwclust-5.0.0/dtwclust/R/SBD.R | 480 - dtwclust-5.0.0/dtwclust/R/SparseDistmat.R | 219 dtwclust-5.0.0/dtwclust/R/TADPole.R | 229 dtwclust-5.0.0/dtwclust/R/TSClusters-classes.R |only dtwclust-5.0.0/dtwclust/R/TSClusters-methods.R |only dtwclust-5.0.0/dtwclust/R/all-cent2.R | 109 dtwclust-5.0.0/dtwclust/R/compare-clusterings.R | 2074 ++--- dtwclust-5.0.0/dtwclust/R/compute-envelope.R | 10 dtwclust-5.0.0/dtwclust/R/cvi.R | 194 dtwclust-5.0.0/dtwclust/R/ddist2.R | 121 dtwclust-5.0.0/dtwclust/R/dtw-basic.R | 517 - dtwclust-5.0.0/dtwclust/R/dtw-lb.R | 567 - dtwclust-5.0.0/dtwclust/R/dtw2.R | 112 dtwclust-5.0.0/dtwclust/R/lb-improved.R | 22 dtwclust-5.0.0/dtwclust/R/lb-keogh.R | 18 dtwclust-5.0.0/dtwclust/R/partitional-fuzzy.R |only dtwclust-5.0.0/dtwclust/R/pkg.R | 432 - dtwclust-5.0.0/dtwclust/R/reinterpolate.R | 4 dtwclust-5.0.0/dtwclust/R/shape-extraction.R | 230 dtwclust-5.0.0/dtwclust/R/tsclust-controls.R | 408 - dtwclust-5.0.0/dtwclust/R/tsclust-family.R | 273 dtwclust-5.0.0/dtwclust/R/tsclust.R | 1558 ++-- dtwclust-5.0.0/dtwclust/R/tslist.R | 14 dtwclust-5.0.0/dtwclust/R/utils.R | 204 dtwclust-5.0.0/dtwclust/R/zscore.R | 103 dtwclust-5.0.0/dtwclust/build/vignette.rds |binary dtwclust-5.0.0/dtwclust/inst/COPYRIGHTS |only dtwclust-5.0.0/dtwclust/inst/NEWS.Rd | 39 dtwclust-5.0.0/dtwclust/inst/doc/dtwclust.Rnw | 3537 +++++----- dtwclust-5.0.0/dtwclust/inst/doc/dtwclust.pdf |binary dtwclust-5.0.0/dtwclust/inst/doc/timing-experiments.R | 1 dtwclust-5.0.0/dtwclust/inst/doc/timing-experiments.Rmd | 1 dtwclust-5.0.0/dtwclust/inst/doc/timing-experiments.html | 360 - dtwclust-5.0.0/dtwclust/inst/include/dtwclust.h | 16 dtwclust-5.0.0/dtwclust/man/DBA.Rd | 3 dtwclust-5.0.0/dtwclust/man/GAK.Rd | 2 dtwclust-5.0.0/dtwclust/man/NCCc.Rd | 5 dtwclust-5.0.0/dtwclust/man/TSClusters-class.Rd | 12 dtwclust-5.0.0/dtwclust/man/compare_clusterings.Rd | 6 dtwclust-5.0.0/dtwclust/man/compute_envelope.Rd | 3 dtwclust-5.0.0/dtwclust/man/cvi.Rd | 87 dtwclust-5.0.0/dtwclust/man/dtw_basic.Rd | 115 dtwclust-5.0.0/dtwclust/man/lb_improved.Rd | 4 dtwclust-5.0.0/dtwclust/man/lb_keogh.Rd | 4 dtwclust-5.0.0/dtwclust/man/tsclust-controls.Rd | 4 dtwclust-5.0.0/dtwclust/man/tsclustFamily-class.Rd | 1 dtwclust-5.0.0/dtwclust/man/tsclusters-methods.Rd | 5 dtwclust-5.0.0/dtwclust/man/tslist.Rd | 4 dtwclust-5.0.0/dtwclust/man/zscore.Rd | 6 dtwclust-5.0.0/dtwclust/src/dba.cpp | 18 dtwclust-5.0.0/dtwclust/src/dtw-basic.c | 22 dtwclust-5.0.0/dtwclust/src/dtwclust.h | 6 dtwclust-5.0.0/dtwclust/src/init.cpp | 2 dtwclust-5.0.0/dtwclust/src/logGAK.c | 10 dtwclust-5.0.0/dtwclust/src/pairs.c | 33 dtwclust-5.0.0/dtwclust/src/tadpole.cpp | 19 dtwclust-5.0.0/dtwclust/tests/testthat.R | 2 dtwclust-5.0.0/dtwclust/tests/testthat/acceptance/dtwb.R | 19 dtwclust-5.0.0/dtwclust/tests/testthat/acceptance/gak.R | 13 dtwclust-5.0.0/dtwclust/tests/testthat/acceptance/lbs.R | 17 dtwclust-5.0.0/dtwclust/tests/testthat/acceptance/symmetric-proxy.R | 147 dtwclust-5.0.0/dtwclust/tests/testthat/helper-all.R | 83 dtwclust-5.0.0/dtwclust/tests/testthat/integration/custom-dist.R | 24 dtwclust-5.0.0/dtwclust/tests/testthat/integration/families.R | 403 - dtwclust-5.0.0/dtwclust/tests/testthat/integration/proxy.R | 184 dtwclust-5.0.0/dtwclust/tests/testthat/regression/clusterings.R | 34 dtwclust-5.0.0/dtwclust/tests/testthat/regression/cvis.R | 61 dtwclust-5.0.0/dtwclust/tests/testthat/regression/family-centroids.R | 4 dtwclust-5.0.0/dtwclust/tests/testthat/system/comparisons.R | 58 dtwclust-5.0.0/dtwclust/tests/testthat/system/data-formats.R | 116 dtwclust-5.0.0/dtwclust/tests/testthat/system/fuzzy.R | 227 dtwclust-5.0.0/dtwclust/tests/testthat/system/hierarchical.R | 142 dtwclust-5.0.0/dtwclust/tests/testthat/system/invalid-inputs.R | 538 - dtwclust-5.0.0/dtwclust/tests/testthat/system/partitional.R | 555 - dtwclust-5.0.0/dtwclust/tests/testthat/system/preproc.R | 140 dtwclust-5.0.0/dtwclust/tests/testthat/test-01-unit.R | 1 dtwclust-5.0.0/dtwclust/tests/testthat/test-06-parallel.R | 4 dtwclust-5.0.0/dtwclust/tests/testthat/unit/centroids.R | 154 dtwclust-5.0.0/dtwclust/tests/testthat/unit/configs.R | 17 dtwclust-5.0.0/dtwclust/tests/testthat/unit/cvis.R | 154 dtwclust-5.0.0/dtwclust/tests/testthat/unit/distances.R | 432 - dtwclust-5.0.0/dtwclust/tests/testthat/unit/methods.R | 109 dtwclust-5.0.0/dtwclust/tests/testthat/unit/misc.R |only dtwclust-5.0.0/dtwclust/vignettes/REFERENCES.bib | 811 +- dtwclust-5.0.0/dtwclust/vignettes/dtwclust.Rnw | 3537 +++++----- dtwclust-5.0.0/dtwclust/vignettes/timing-experiments.Rmd | 1 113 files changed, 10857 insertions(+), 10888 deletions(-)