Title: Determines Species Probabilities Based on Functional Traits
Description: For determining species probabilities that satisfy a given
functional trait profile. Restoring resilient ecosystems requires a
flexible framework for selecting assemblages that are based on the functional
traits of species. However, current trait-based models have been biased toward
algorithms that can only select species by optimising specific trait values,
and could not elegantly accommodate the common desire among restoration ecologists
to produce functionally diverse assemblages. We have solved this problem by
applying a non-linear optimisation algorithm that optimises Rao’s Q, a closed-form
functional diversity index that incorporates species abundances, subject to other
linear constraints. This framework generalises previous models that could only
optimise the entropy of the community, and can optimise both functional diversity
and entropy simultaneously.
Author: Daniel Laughlin [aut, cre]
Maintainer: Daniel Laughlin <danielclaughlin@gmail.com>
Diff between Select versions 1.1 dated 2017-02-16 and 1.2 dated 2017-12-16
Select-1.1/Select/R/plotprobs.R |only Select-1.1/Select/R/select.R |only Select-1.1/Select/man/plotprobs.Rd |only Select-1.1/Select/man/select.Rd |only Select-1.2/Select/DESCRIPTION | 12 ++++++------ Select-1.2/Select/MD5 | 12 ++++++------ Select-1.2/Select/NAMESPACE | 8 ++++---- Select-1.2/Select/R/plotProbs.R |only Select-1.2/Select/R/selectSpecies.R |only Select-1.2/Select/man/plotProbs.Rd |only Select-1.2/Select/man/selectSpecies.Rd |only 11 files changed, 16 insertions(+), 16 deletions(-)
Title: Algebraic Tools for the Analysis of Multiple Social Networks
Description: Algebraic procedures for the analysis of multiple social networks are delivered with
this package. Among other things, it makes possible to create and manipulate multivariate
network data with different formats, and there are effective ways available to treat multiple
networks with routines that combine algebraic systems like the partially ordered semigroup or
the semiring structure together with the relational bundles occurring in different types of
multivariate network data sets. It also provides an algebraic approach for two-mode networks
through Galois derivations between families of the pairs of subsets in the two domains.
Author: Antonio Rivero Ostoic [aut, cre]
Maintainer: Antonio Rivero Ostoic <multiplex@post.com>
Diff between multiplex versions 2.7 dated 2017-08-16 and 2.8 dated 2017-12-16
multiplex-2.7/multiplex/R/convert.R |only multiplex-2.7/multiplex/R/relabel.R |only multiplex-2.7/multiplex/man/convert.Rd |only multiplex-2.7/multiplex/man/relabel.Rd |only multiplex-2.8/multiplex/DESCRIPTION | 8 - multiplex-2.8/multiplex/MD5 | 88 ++++++------ multiplex-2.8/multiplex/R/as.semigroup.R | 38 +++-- multiplex-2.8/multiplex/R/bundle.census.R | 2 multiplex-2.8/multiplex/R/bundles.R | 2 multiplex-2.8/multiplex/R/cngr.R | 2 multiplex-2.8/multiplex/R/comps.R | 4 multiplex-2.8/multiplex/R/diagram.R | 108 ++++++++++----- multiplex-2.8/multiplex/R/dichot.R | 11 + multiplex-2.8/multiplex/R/edgeT.R | 52 +++---- multiplex-2.8/multiplex/R/jnt.R | 19 +- multiplex-2.8/multiplex/R/mnplx.R | 49 +++---- multiplex-2.8/multiplex/R/neighb.R | 23 +-- multiplex-2.8/multiplex/R/perm.R | 38 +++-- multiplex-2.8/multiplex/R/pi.rels.R | 7 - multiplex-2.8/multiplex/R/rbox.R | 14 +- multiplex-2.8/multiplex/R/reduc.R | 27 ++- multiplex-2.8/multiplex/R/reducs.R | 2 multiplex-2.8/multiplex/R/rm.isol.R | 130 ++----------------- multiplex-2.8/multiplex/R/transf.R | 15 +- multiplex-2.8/multiplex/R/wordT.R | 68 +++++---- multiplex-2.8/multiplex/R/zbind.R | 11 + multiplex-2.8/multiplex/build/vignette.rds |binary multiplex-2.8/multiplex/inst/CHANGELOG | 17 ++ multiplex-2.8/multiplex/inst/doc/TwoModeNetworks.pdf |binary multiplex-2.8/multiplex/man/as.semigroup.Rd | 16 +- multiplex-2.8/multiplex/man/cph.Rd | 11 - multiplex-2.8/multiplex/man/diagram.Rd | 31 ++++ multiplex-2.8/multiplex/man/dichot.Rd | 6 multiplex-2.8/multiplex/man/edgeT.Rd | 1 multiplex-2.8/multiplex/man/iinc.Rd | 2 multiplex-2.8/multiplex/man/jnt.Rd | 2 multiplex-2.8/multiplex/man/mnplx.Rd | 7 - multiplex-2.8/multiplex/man/multiplex-package.Rd | 4 multiplex-2.8/multiplex/man/neighb.Rd | 14 +- multiplex-2.8/multiplex/man/perm.Rd | 4 multiplex-2.8/multiplex/man/pi.rels.Rd | 14 +- multiplex-2.8/multiplex/man/rbox.Rd | 10 - multiplex-2.8/multiplex/man/reduc.Rd | 2 multiplex-2.8/multiplex/man/rm.isol.Rd | 7 - multiplex-2.8/multiplex/man/semigroup.Rd | 2 multiplex-2.8/multiplex/man/transf.Rd | 6 multiplex-2.8/multiplex/man/wordT.Rd | 1 47 files changed, 464 insertions(+), 411 deletions(-)
Title: High-Performance Stemmer, Tokenizer, and Spell Checker
Description: Low level spell checker and morphological analyzer based on the
famous 'hunspell' library <https://hunspell.github.io>. The package can analyze
or check individual words as well as parse text, latex, html or xml documents.
For a more user-friendly interface use the 'spelling' package which builds on
this package to automate checking of files, documentation and vignettes in all
common formats.
Author: Jeroen Ooms [aut, cre],
Authors of libhunspell [cph] (see AUTHORS file)
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between hunspell versions 2.8 dated 2017-12-12 and 2.9 dated 2017-12-16
hunspell-2.8/hunspell/src/check.cpp |only hunspell-2.8/hunspell/src/find.cpp |only hunspell-2.8/hunspell/src/utils.h |only hunspell-2.8/hunspell/tests/testthat/test_case.R |only hunspell-2.8/hunspell/tests/testthat/test_encodings.R |only hunspell-2.8/hunspell/tests/testthat/test_parser.R |only hunspell-2.9/hunspell/DESCRIPTION | 29 +++--- hunspell-2.9/hunspell/MD5 | 48 +++++----- hunspell-2.9/hunspell/NEWS | 8 + hunspell-2.9/hunspell/R/RcppExports.R | 4 hunspell-2.9/hunspell/R/hunspell.R | 48 +++++----- hunspell-2.9/hunspell/README.md | 17 +-- hunspell-2.9/hunspell/inst/AUTHORS |only hunspell-2.9/hunspell/inst/WORDLIST |only hunspell-2.9/hunspell/inst/dict/en_GB.aff | 8 + hunspell-2.9/hunspell/inst/dict/en_US.aff | 4 hunspell-2.9/hunspell/inst/doc/intro.R | 5 - hunspell-2.9/hunspell/inst/doc/intro.Rmd | 11 +- hunspell-2.9/hunspell/inst/doc/intro.html | 86 +++++++++--------- hunspell-2.9/hunspell/man/hunspell.Rd | 8 - hunspell-2.9/hunspell/src/Makevars | 12 +- hunspell-2.9/hunspell/src/RcppExports.cpp | 9 - hunspell-2.9/hunspell/src/dictionary.cpp |only hunspell-2.9/hunspell/src/dictionary.h |only hunspell-2.9/hunspell/src/hunspell/hunvisapi.h | 4 hunspell-2.9/hunspell/src/hunspell_types.h | 2 hunspell-2.9/hunspell/src/parser.cpp |only hunspell-2.9/hunspell/tests/spelling.R |only hunspell-2.9/hunspell/tests/testthat/test-cache.R |only hunspell-2.9/hunspell/tests/testthat/test-case.R |only hunspell-2.9/hunspell/tests/testthat/test-encodings.R |only hunspell-2.9/hunspell/tests/testthat/test-parser.R |only hunspell-2.9/hunspell/vignettes/intro.Rmd | 11 +- 33 files changed, 173 insertions(+), 141 deletions(-)
Title: Statistical Tests and Graphics for Hardy-Weinberg Equilibrium
Description: Contains tools for exploring Hardy-Weinberg equilibrium (Hardy, 1908; Weinberg, 1908) for bi and multi-allelic genetic marker data. All classical tests (chi-square, exact, likelihood-ratio and permutation tests) with bi-allelic variants are included in the package, as well as functions for power computation and for the simulation of marker data under equilibrium and disequilibrium. Routines for dealing with markers on the X-chromosome are included, including Bayesian procedures. Some exact and permutation procedures also work with multi-allelic variants. Special test procedures that jointly address Hardy-Weinberg equilibrium and equality of allele frequencies in both sexes are supplied, for the bi and multi-allelic case. Functions for testing equilibrium in the presence of missing data by using multiple imputation are also provided. Implements several graphics for exploring the equilibrium status of a large set of bi-allelic markers: ternary plots with acceptance regions, log-ratio plots and Q-Q plots.
Author: Jan Graffelman [aut, cre],
Christopher Chang [ctb],
Xavi Puig [ctb],
Jan Wigginton [ctb]
Maintainer: Jan Graffelman <jan.graffelman@upc.edu>
Diff between HardyWeinberg versions 1.5.8 dated 2017-05-17 and 1.5.9 dated 2017-12-16
DESCRIPTION | 30 +++++++-------- MD5 | 79 ++++++++++++++++++++++++++++++++++-------- NAMESPACE | 12 ++++-- R/EAFExact.R |only R/HWAIC.R |only R/HWLRAllTests.R |only R/HWLRtest.R |only R/HWPerm.mult.R |only R/HWTernaryPlot.R | 2 - R/HWTriExact.R |only R/alleles.R |only R/dens.auto.R |only R/density.ma.gender.R |only R/dgraffelmanweir.bi.R |only R/dlevene.R |only R/dlevene.bi.R |only R/eqn3.R |only R/eqnE.R |only R/gen.outcomesXtri.R |only R/hwe.modelC.obj.R |only R/hwe.modelC.sol.R |only R/hwe.modelE.obj.R |only R/hwe.modelE.sol.R |only R/limit.R |only R/loglik.1.R |only R/loglik.2.R |only R/loglik.3.R |only R/loglik.4.R |only R/loglik.5.R |only R/loglik.6.R |only R/n.alleles.R |only R/outcomes.3.R |only R/strsort.R |only R/toTriangular.R |only build/vignette.rds |binary data/JPTmultiallelicsChr7.rda |only data/JPTmultiallelicsChrX.rda |only data/JPTtriallelicsChr7.rda |only data/JPTtriallelicsChrX.rda |only inst/CITATION | 2 - inst/doc/HardyWeinberg.R | 58 +++++++++++++++--------------- inst/doc/HardyWeinberg.Rnw | 4 ++ inst/doc/HardyWeinberg.pdf |binary man/EAFExact.Rd |only man/HWAIC.Rd |only man/HWExactPrevious.Rd | 4 +- man/HWExactStats.Rd | 2 - man/HWLRAllTests.Rd |only man/HWLRtest.Rd |only man/HWPerm.mult.Rd |only man/HWTernaryPlot.Rd | 2 - man/HWTriExact.Rd |only man/HardyWeinberg-package.Rd | 4 +- man/JPTmultiallelicsChr7.Rd |only man/JPTmultiallelicsChrX.Rd |only man/JPTtriallelicsChr7.Rd |only man/JPTtriallelicsChrX.Rd |only man/alleles.Rd |only man/dgraffelmanweir.bi.Rd |only man/dlevene.Rd |only man/dlevene.bi.Rd |only man/n.alleles.Rd |only man/strsort.Rd |only man/toTriangular.Rd |only vignettes/HardyWeinberg.Rnw | 4 ++ vignettes/HardyWeinberg.bib | 20 +++++++++- 66 files changed, 150 insertions(+), 73 deletions(-)
Title: Use and Explore CRU CL v. 2.0 Climatology Elements in R
Description: Provides functions that automate downloading and importing
University of East Anglia Climate Research Unit (CRU) CL v. 2.0 climatology
data into R, facilitates the calculation of minimum temperature and maximum
temperature and formats the data into a tidy data frame as a tibble or a
list of raster stack objects for use in an R session. CRU CL v. 2.0 data
are a gridded climatology of 1961-1990 monthly means released in 2002 and
cover all land areas (excluding Antarctica) at 10 arcminutes
(0.1666667 degree) resolution. For more information see the description of
the data provided by the University of East Anglia Climate Research Unit,
<https://crudata.uea.ac.uk/cru/data/hrg/tmc/readme.txt>.
Author: Adam Sparks [aut, cre] (0000-0002-0061-8359)
Maintainer: Adam Sparks <adamhsparks@gmail.com>
Diff between getCRUCLdata versions 0.2.1 dated 2017-12-15 and 0.2.2 dated 2017-12-16
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- NEWS.md | 12 ++++++++++++ 3 files changed, 18 insertions(+), 6 deletions(-)
Title: The Critical Care Clinical Data Processing Tools
Description: An electronic health care record (EHR) data cleaning and processing
platform. It focus on heterogeneous high resolution longitudinal data. It works with
Critical Care Health Informatics Collaborative (CCHIC) dataset. It is
created to address various data reliability and accessibility problems of
EHRs as such.
Author: Sinan Shi, David Perez-Suarez, Steve Harris, Niall MacCallum, David
Brealey, Mervyn Singer, James Hetherington
Maintainer: Sinan Shi <s.shi@ucl.ac.uk>
Diff between cleanEHR versions 0.1 dated 2017-02-01 and 1.0 dated 2017-12-16
cleanEHR-0.1/cleanEHR/R/create2dclean.R |only cleanEHR-0.1/cleanEHR/R/pipeline.R |only cleanEHR-0.1/cleanEHR/R/reallocateTime.R |only cleanEHR-0.1/cleanEHR/R/selectTable.R |only cleanEHR-0.1/cleanEHR/R/sql_demographic.R |only cleanEHR-0.1/cleanEHR/R/summary.R |only cleanEHR-0.1/cleanEHR/R/unique.spell.R |only cleanEHR-0.1/cleanEHR/R/xml2ccdata.R |only cleanEHR-0.1/cleanEHR/data/icnarc_table.RData |only cleanEHR-0.1/cleanEHR/inst/doc/sample_ccd.RData |only cleanEHR-0.1/cleanEHR/inst/doc/tour.R |only cleanEHR-0.1/cleanEHR/inst/doc/tour.Rmd |only cleanEHR-0.1/cleanEHR/inst/doc/tour.html |only cleanEHR-0.1/cleanEHR/inst/pipeline |only cleanEHR-0.1/cleanEHR/inst/sql |only cleanEHR-0.1/cleanEHR/man/add.episode.list.to.record.Rd |only cleanEHR-0.1/cleanEHR/man/add.episode.to.record.Rd |only cleanEHR-0.1/cleanEHR/man/add.record.to.record.Rd |only cleanEHR-0.1/cleanEHR/man/ccRecord_subset_files.Rd |only cleanEHR-0.1/cleanEHR/man/create.cctable.Rd |only cleanEHR-0.1/cleanEHR/man/demographic.patient.spell.Rd |only cleanEHR-0.1/cleanEHR/man/episode.graph.Rd |only cleanEHR-0.1/cleanEHR/man/extractIndexTable.Rd |only cleanEHR-0.1/cleanEHR/man/extractInfo.Rd |only cleanEHR-0.1/cleanEHR/man/getItemInfo.Rd |only cleanEHR-0.1/cleanEHR/man/getfilter.Rd |only cleanEHR-0.1/cleanEHR/man/icnarc.Rd |only cleanEHR-0.1/cleanEHR/man/parse.new.xml.Rd |only cleanEHR-0.1/cleanEHR/man/selectTable.Rd |only cleanEHR-0.1/cleanEHR/man/sql.demographic.table.Rd |only cleanEHR-0.1/cleanEHR/man/unique_spell.Rd |only cleanEHR-0.1/cleanEHR/man/update_database.Rd |only cleanEHR-0.1/cleanEHR/tests/testthat/test_demographic.r |only cleanEHR-0.1/cleanEHR/tests/testthat/test_pipeline.r |only cleanEHR-0.1/cleanEHR/vignettes/tour.Rmd |only cleanEHR-1.0/cleanEHR/DESCRIPTION | 35 cleanEHR-1.0/cleanEHR/MD5 | 185 +- cleanEHR-1.0/cleanEHR/NAMESPACE | 48 cleanEHR-1.0/cleanEHR/R/RcppExports.R | 2 cleanEHR-1.0/cleanEHR/R/ccRecord.R | 262 ++-- cleanEHR-1.0/cleanEHR/R/ccTable.R | 654 +++++++--- cleanEHR-1.0/cleanEHR/R/cchic_xml.R |only cleanEHR-1.0/cleanEHR/R/data.R |only cleanEHR-1.0/cleanEHR/R/data.quality.report.R | 80 - cleanEHR-1.0/cleanEHR/R/deltaTime.R | 3 cleanEHR-1.0/cleanEHR/R/demographics.R |only cleanEHR-1.0/cleanEHR/R/filter.categorical.R | 48 cleanEHR-1.0/cleanEHR/R/filter.missingness.R | 36 cleanEHR-1.0/cleanEHR/R/filter.range.R | 70 - cleanEHR-1.0/cleanEHR/R/imputation.R | 7 cleanEHR-1.0/cleanEHR/R/stdid.R | 14 cleanEHR-1.0/cleanEHR/R/utilities.R | 141 -- cleanEHR-1.0/cleanEHR/R/zzz.R | 23 cleanEHR-1.0/cleanEHR/build/vignette.rds |binary cleanEHR-1.0/cleanEHR/data/ITEM_REFTABLE2.RData |only cleanEHR-1.0/cleanEHR/data/icnarc_table.csv.gz |only cleanEHR-1.0/cleanEHR/data/sample_ccd.RData |only cleanEHR-1.0/cleanEHR/inst/doc/cchic_overview.R |only cleanEHR-1.0/cleanEHR/inst/doc/cchic_overview.Rmd |only cleanEHR-1.0/cleanEHR/inst/doc/cchic_overview.html |only cleanEHR-1.0/cleanEHR/inst/doc/data_clean.R |only cleanEHR-1.0/cleanEHR/inst/doc/data_clean.Rmd |only cleanEHR-1.0/cleanEHR/inst/doc/data_clean.html |only cleanEHR-1.0/cleanEHR/inst/report/data_quality_report.Rmd | 14 cleanEHR-1.0/cleanEHR/man/ITEM_REF.Rd |only cleanEHR-1.0/cleanEHR/man/ccEpisode-class.Rd | 4 cleanEHR-1.0/cleanEHR/man/ccRecord-class.Rd | 8 cleanEHR-1.0/cleanEHR/man/ccTable-class.Rd | 32 cleanEHR-1.0/cleanEHR/man/ccTable_apply_filters.Rd |only cleanEHR-1.0/cleanEHR/man/ccTable_clean.Rd |only cleanEHR-1.0/cleanEHR/man/ccTable_create_cctable.Rd |only cleanEHR-1.0/cleanEHR/man/ccTable_export_csv.Rd |only cleanEHR-1.0/cleanEHR/man/ccTable_filter_categories.Rd |only cleanEHR-1.0/cleanEHR/man/ccTable_filter_missingness.Rd |only cleanEHR-1.0/cleanEHR/man/ccTable_filter_nodata.Rd |only cleanEHR-1.0/cleanEHR/man/ccTable_filter_range.Rd |only cleanEHR-1.0/cleanEHR/man/ccTable_reload_conf.Rd |only cleanEHR-1.0/cleanEHR/man/ccTable_reset.Rd |only cleanEHR-1.0/cleanEHR/man/ccd.Rd |only cleanEHR-1.0/cleanEHR/man/ccd_demographic_spell.Rd |only cleanEHR-1.0/cleanEHR/man/ccd_demographic_table.Rd |only cleanEHR-1.0/cleanEHR/man/ccd_select_table.Rd |only cleanEHR-1.0/cleanEHR/man/ccd_unique_spell.Rd |only cleanEHR-1.0/cleanEHR/man/create2dclean.Rd | 4 cleanEHR-1.0/cleanEHR/man/create_cctable.Rd |only cleanEHR-1.0/cleanEHR/man/data.checklist.Rd | 2 cleanEHR-1.0/cleanEHR/man/data.quality.report.Rd | 4 cleanEHR-1.0/cleanEHR/man/data.quality.report.brc.Rd | 2 cleanEHR-1.0/cleanEHR/man/deltaTime.Rd | 4 cleanEHR-1.0/cleanEHR/man/demg.distribution.Rd | 2 cleanEHR-1.0/cleanEHR/man/demographic.data.completeness.Rd | 2 cleanEHR-1.0/cleanEHR/man/extract_file_origin.Rd | 2 cleanEHR-1.0/cleanEHR/man/extract_info.Rd |only cleanEHR-1.0/cleanEHR/man/getEpisodePeriod.Rd | 2 cleanEHR-1.0/cleanEHR/man/getXmlepisode.Rd | 2 cleanEHR-1.0/cleanEHR/man/icnarc2diagnosis.Rd | 10 cleanEHR-1.0/cleanEHR/man/icnarc_table.Rd |only cleanEHR-1.0/cleanEHR/man/inrange.Rd | 2 cleanEHR-1.0/cleanEHR/man/lenstay.Rd |only cleanEHR-1.0/cleanEHR/man/long2stname.Rd |only cleanEHR-1.0/cleanEHR/man/plot_episode-ccEpisode-character-method.Rd |only cleanEHR-1.0/cleanEHR/man/plot_episode-ccEpisode-missing-method.Rd |only cleanEHR-1.0/cleanEHR/man/plot_episode.Rd |only cleanEHR-1.0/cleanEHR/man/plus-ccRecord-NULL-method.Rd | 4 cleanEHR-1.0/cleanEHR/man/plus-ccRecord-list-method.Rd | 12 cleanEHR-1.0/cleanEHR/man/reallocateTimeRecord.Rd | 2 cleanEHR-1.0/cleanEHR/man/sub-ccRecord-character-method.Rd | 4 cleanEHR-1.0/cleanEHR/man/sub-sub-ccRecord-method.Rd | 4 cleanEHR-1.0/cleanEHR/man/table1.Rd | 2 cleanEHR-1.0/cleanEHR/man/xml2Data.Rd | 2 cleanEHR-1.0/cleanEHR/man/xmlLoad.Rd | 2 cleanEHR-1.0/cleanEHR/src/RcppExports.cpp | 12 cleanEHR-1.0/cleanEHR/src/collapseTime.cpp | 24 cleanEHR-1.0/cleanEHR/tests/data/ANALYSIS_REF.yaml | 15 cleanEHR-1.0/cleanEHR/tests/data/sample_ccd.RData |only cleanEHR-1.0/cleanEHR/tests/testthat/test_0_load_xml.r | 5 cleanEHR-1.0/cleanEHR/tests/testthat/test_ccdatatable.r | 37 cleanEHR-1.0/cleanEHR/tests/testthat/test_deltaTime.r | 4 cleanEHR-1.0/cleanEHR/tests/testthat/test_demographics.r |only cleanEHR-1.0/cleanEHR/tests/testthat/test_range_filter.r | 12 cleanEHR-1.0/cleanEHR/tests/testthat/test_record2.r | 36 cleanEHR-1.0/cleanEHR/tests/testthat/test_report.r | 18 cleanEHR-1.0/cleanEHR/tests/testthat/test_selectTable.r | 18 cleanEHR-1.0/cleanEHR/tests/testthat/test_utilities.r |only cleanEHR-1.0/cleanEHR/vignettes/cchic_overview.Rmd |only cleanEHR-1.0/cleanEHR/vignettes/data_clean.Rmd |only cleanEHR-1.0/cleanEHR/vignettes/graphs |only 127 files changed, 1217 insertions(+), 700 deletions(-)
Title: Fast DocumentTermMatrix and TermDocumentMatrix Creation
Description: Harness the power of 'quanteda', 'data.table' & 'stringi' to quickly generate 'tm' DocumentTermMatrix
and TermDocumentMatrix data structures.
Author: Tyler Rinker [aut, cre]
Maintainer: Tyler Rinker <tyler.rinker@gmail.com>
Diff between gofastr versions 0.2.1 dated 2017-02-19 and 0.3.0 dated 2017-12-16
gofastr-0.2.1/gofastr/inst/figure |only gofastr-0.3.0/gofastr/DESCRIPTION | 18 +- gofastr-0.3.0/gofastr/MD5 | 43 +++--- gofastr-0.3.0/gofastr/NEWS | 11 + gofastr-0.3.0/gofastr/R/q_dtm.R | 4 gofastr-0.3.0/gofastr/README.md | 65 ++++------ gofastr-0.3.0/gofastr/data/partial_republican_debates_2015.rda |binary gofastr-0.3.0/gofastr/data/presidential_debates_2012.rda |binary gofastr-0.3.0/gofastr/inst/CITATION | 5 gofastr-0.3.0/gofastr/man/as_dtm.Rd | 1 gofastr-0.3.0/gofastr/man/filter_documents.Rd | 1 gofastr-0.3.0/gofastr/man/filter_tf_idf.Rd | 7 - gofastr-0.3.0/gofastr/man/filter_words.Rd | 1 gofastr-0.3.0/gofastr/man/gofastr.Rd | 3 gofastr-0.3.0/gofastr/man/partial_republican_debates_2015.Rd | 1 gofastr-0.3.0/gofastr/man/presidential_debates_2012.Rd | 1 gofastr-0.3.0/gofastr/man/q_dtm.Rd | 1 gofastr-0.3.0/gofastr/man/q_tdm.Rd | 1 gofastr-0.3.0/gofastr/man/remove_stopwords.Rd | 3 gofastr-0.3.0/gofastr/man/select_documents.Rd | 1 gofastr-0.3.0/gofastr/man/sub_in_na.Rd | 1 gofastr-0.3.0/gofastr/tools |only 22 files changed, 78 insertions(+), 90 deletions(-)
Title: Dive Analysis and Calibration
Description: Utilities to represent, visualize, filter, analyse, and summarize
time-depth recorder (TDR) data. Miscellaneous functions for
handling location data are also provided.
Author: Sebastian P. Luque <spluque@gmail.com>
Maintainer: Sebastian P. Luque <spluque@gmail.com>
Diff between diveMove versions 1.4.3 dated 2017-03-06 and 1.4.4 dated 2017-12-16
DESCRIPTION | 6 +++--- MD5 | 20 ++++++++++---------- NEWS | 12 ++++++++++++ R/AllMethod.R | 2 ++ R/detDive.R | 27 ++++++++++++++++----------- build/vignette.rds |binary inst/doc/diveMove.Rnw | 1 - inst/doc/diveMove.pdf |binary man/calibrateDepth.Rd | 10 +++++++++- man/labDive-internal.Rd | 3 ++- vignettes/diveMove.Rnw | 1 - 11 files changed, 54 insertions(+), 28 deletions(-)
Title: 'Drat' R Archive Template
Description: Creation and use of R Repositories via helper functions
to insert packages into a repository, and to add repository information
to the current R session. Two primary types of repositories are support:
gh-pages at GitHub, as well as local repositories on either the same machine
or a local network. Drat is a recursive acronym: Drat R Archive Template.
Author: Dirk Eddelbuettel with contributions by Carl Boettiger, Neal Fultz,
Sebastian Gibb, Colin Gillespie, Jan Górecki, Matt Jones, Thomas Leeper,
Steven Pav and Jan Schulz.
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between drat versions 0.1.3 dated 2017-09-16 and 0.1.4 dated 2017-12-16
ChangeLog | 16 +++++++++++++++- DESCRIPTION | 14 +++++++------- MD5 | 14 +++++++------- R/insertPackage.R | 48 +++++++++++++++++++++++++++++++++--------------- README.md | 1 - build/vignette.rds |binary inst/NEWS.Rd | 30 ++++++++++++++++++++++++++++++ man/insertPackage.Rd | 26 ++++++++++++++++++-------- 8 files changed, 110 insertions(+), 39 deletions(-)
Title: Data Management and Analysis of Tests
Description: A system for the management, assessment, and psychometric analysis of data from educational and psychological tests. Developed at Cito, The Netherlands, with subsidy from the Dutch Ministry of Education, Culture, and Science.
Author: Gunter Maris, Timo Bechger, Jesse Koops, Ivailo Partchev
Maintainer: Ivailo Partchev <Ivailo.Partchev@cito.nl>
Diff between dexter versions 0.5.1 dated 2017-10-22 and 0.6.0 dated 2017-12-16
dexter-0.5.1/dexter/man/predicate_variables.Rd |only dexter-0.6.0/dexter/DESCRIPTION | 16 dexter-0.6.0/dexter/MD5 | 153 +-- dexter-0.6.0/dexter/NAMESPACE | 35 dexter-0.6.0/dexter/NEWS | 13 dexter-0.6.0/dexter/R/Rversions.R |only dexter-0.6.0/dexter/R/ability.R |only dexter-0.6.0/dexter/R/anon.R | 450 ++++++---- dexter-0.6.0/dexter/R/d3c.R | 4 dexter-0.6.0/dexter/R/data_selection.R | 65 + dexter-0.6.0/dexter/R/database.R | 22 dexter-0.6.0/dexter/R/dexter.R | 154 ++- dexter-0.6.0/dexter/R/dif.R | 13 dexter-0.6.0/dexter/R/enorm.R | 236 +---- dexter-0.6.0/dexter/R/individual_differences.R | 19 dexter-0.6.0/dexter/R/interaction_model.R | 299 +++--- dexter-0.6.0/dexter/R/misc.R | 105 ++ dexter-0.6.0/dexter/R/plausible_scores.R |only dexter-0.6.0/dexter/R/plausible_values.R | 24 dexter-0.6.0/dexter/R/plots.R | 80 + dexter-0.6.0/dexter/R/predicates.R | 26 dexter-0.6.0/dexter/R/zzz.R |only dexter-0.6.0/dexter/build/vignette.rds |binary dexter-0.6.0/dexter/inst/doc/DIF_vignette.R | 20 dexter-0.6.0/dexter/inst/doc/DIF_vignette.Rmd | 30 dexter-0.6.0/dexter/inst/doc/DIF_vignette.html | 21 dexter-0.6.0/dexter/inst/doc/Plausible_Values.R | 12 dexter-0.6.0/dexter/inst/doc/Plausible_Values.Rmd | 18 dexter-0.6.0/dexter/inst/doc/Plausible_Values.html | 47 - dexter-0.6.0/dexter/inst/doc/Test_Individual_differences.R | 8 dexter-0.6.0/dexter/inst/doc/Test_Individual_differences.Rmd | 14 dexter-0.6.0/dexter/inst/doc/Test_Individual_differences.html | 29 dexter-0.6.0/dexter/inst/doc/data_management.R | 30 dexter-0.6.0/dexter/inst/doc/data_management.Rmd | 61 + dexter-0.6.0/dexter/inst/doc/data_management.html | 135 +-- dexter-0.6.0/dexter/inst/doc/dexter.R | 16 dexter-0.6.0/dexter/inst/doc/dexter.Rmd | 21 dexter-0.6.0/dexter/inst/doc/dexter.html | 30 dexter-0.6.0/dexter/inst/doc/profile-plots.R | 47 - dexter-0.6.0/dexter/inst/doc/profile-plots.Rmd | 95 +- dexter-0.6.0/dexter/inst/doc/profile-plots.html | 62 + dexter-0.6.0/dexter/inst/extdata/dexter_sqlite.sql | 2 dexter-0.6.0/dexter/inst/extdata/dexter_standard.sql | 2 dexter-0.6.0/dexter/man/DIF.Rd | 11 dexter-0.6.0/dexter/man/ability.Rd | 69 + dexter-0.6.0/dexter/man/add_booklet.Rd | 6 dexter-0.6.0/dexter/man/add_item_properties.Rd | 31 dexter-0.6.0/dexter/man/as.data.frame.prms.Rd | 4 dexter-0.6.0/dexter/man/coef.prms.Rd |only dexter-0.6.0/dexter/man/coef.rim.Rd |only dexter-0.6.0/dexter/man/design_as_network.Rd | 3 dexter-0.6.0/dexter/man/design_is_connected.Rd | 3 dexter-0.6.0/dexter/man/distractor_plot.Rd | 19 dexter-0.6.0/dexter/man/fit_domains.Rd | 12 dexter-0.6.0/dexter/man/fit_enorm.Rd | 11 dexter-0.6.0/dexter/man/fit_inter.Rd | 5 dexter-0.6.0/dexter/man/get_responses.Rd | 2 dexter-0.6.0/dexter/man/individual_differences.Rd | 6 dexter-0.6.0/dexter/man/plausible_scores.Rd |only dexter-0.6.0/dexter/man/plausible_values.Rd | 4 dexter-0.6.0/dexter/man/plot.rim.Rd | 2 dexter-0.6.0/dexter/man/print.prms.Rd | 4 dexter-0.6.0/dexter/man/profile_plot.Rd | 2 dexter-0.6.0/dexter/man/show_rules.Rd | 6 dexter-0.6.0/dexter/man/start_new_project.Rd | 9 dexter-0.6.0/dexter/src/elsymean.c | 101 +- dexter-0.6.0/dexter/src/packagename_init.c | 3 dexter-0.6.0/dexter/src/roger.c | 62 + dexter-0.6.0/dexter/src/roger.h | 2 dexter-0.6.0/dexter/tests |only dexter-0.6.0/dexter/vignettes/DIF_vignette.Rmd | 30 dexter-0.6.0/dexter/vignettes/Plausible_Values.Rmd | 18 dexter-0.6.0/dexter/vignettes/Test_Individual_differences.Rmd | 14 dexter-0.6.0/dexter/vignettes/data_management.Rmd | 61 + dexter-0.6.0/dexter/vignettes/dexter.Rmd | 21 dexter-0.6.0/dexter/vignettes/profile-plots.Rmd | 95 +- 76 files changed, 1892 insertions(+), 1138 deletions(-)
Title: Quality Improvement Charts
Description: Functions for making run charts, Shewhart control charts and
Pareto charts for continuous quality improvement. Included control charts are:
I, MR, Xbar, S, T, C, U, U', P, P', and G charts. Non-random variation in the
form of minor to moderate persistent shifts in data over time is identified by
the Anhoej rules for unusually long runs and unusually few crossing
[Anhoej, Olesen (2014) <doi:10.1371/journal.pone.0113825>].
Non-random variation in the form of larger, possibly transient, shifts is
identified by Shewhart's 3-sigma rule [Mohammed, Worthington, Woodall (2008)
<doi:10.1136/qshc.2004.012047>].
Author: Jacob Anhoej [aut, cre]
Maintainer: Jacob Anhoej <jacob@anhoej.net>
Diff between qicharts2 versions 0.2.1 dated 2017-12-08 and 0.2.3 dated 2017-12-16
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- NEWS | 8 ++++++++ R/qic.R | 2 +- inst/doc/qicharts2.html | 4 ++-- tests/testthat/test_montgomery.R | 3 +++ 6 files changed, 22 insertions(+), 11 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-11-12 0.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-12-06 1.0.3
2017-11-27 1.0.1
2017-11-06 1.0.0
Title: Low-Cost Anonymous Functions
Description: Provides a compact variation of the usual syntax of function
declaration, in order to support tidyverse-style quasiquotation of a
function's arguments and body.
Author: Eugene Ha [aut, cre]
Maintainer: Eugene Ha <eha@posteo.de>
Diff between nofrills versions 0.2.0 dated 2017-09-18 and 0.2.1 dated 2017-12-16
DESCRIPTION | 6 +++--- MD5 | 23 ++++++++++++----------- NAMESPACE | 1 - NEWS | 6 ++++++ R/as-fn.R | 13 +++++++------ R/exprs.R | 12 ++++++------ R/fn.R | 22 +++++++++------------- R/make-fn-aware.R | 2 +- README.md | 34 +++++++++++++++++++++++++--------- man/fn.Rd | 16 +++++++++------- tests/testthat/helper.R |only tests/testthat/test-functions.R | 4 ---- tests/testthat/test-quasiquotation.R | 22 +++++++++++----------- 13 files changed, 89 insertions(+), 72 deletions(-)