Title: Connect to ODBC Compatible Databases (using the DBI Interface)
Description: A DBI-compatible interface to ODBC databases.
Author: Jim Hester [aut, cre],
Hadley Wickham [aut],
lexicalunit [cph] (nanodbc library),
Google Inc. [cph] (cctz library),
RStudio [cph, fnd]
Maintainer: Jim Hester <james.hester@rstudio.com>
Diff between odbc versions 1.1.5 dated 2018-01-23 and 1.1.6 dated 2018-06-09
odbc-1.1.5/odbc/man/dbUnQuoteIdentifier.Rd |only odbc-1.1.6/odbc/DESCRIPTION | 10 - odbc-1.1.6/odbc/MD5 | 45 ++-- odbc-1.1.6/odbc/NAMESPACE | 3 odbc-1.1.6/odbc/NEWS.md | 13 + odbc-1.1.6/odbc/R/Connection.R | 91 ++++------ odbc-1.1.6/odbc/R/Driver.R | 10 - odbc-1.1.6/odbc/R/RcppExports.R | 6 odbc-1.1.6/odbc/R/Result.R | 13 - odbc-1.1.6/odbc/R/Table.R | 22 ++ odbc-1.1.6/odbc/R/Viewer.R | 70 +++++++ odbc-1.1.6/odbc/build/odbc.pdf |binary odbc-1.1.6/odbc/inst/icons |only odbc-1.1.6/odbc/man/OdbcConnection.Rd | 20 +- odbc-1.1.6/odbc/man/OdbcResult.Rd | 3 odbc-1.1.6/odbc/man/dbConnect-OdbcDriver-method.Rd | 13 - odbc-1.1.6/odbc/man/dbListFields-OdbcConnection-character-method.Rd |only odbc-1.1.6/odbc/man/dbListTables-OdbcConnection-method.Rd |only odbc-1.1.6/odbc/man/odbc-package.Rd | 4 odbc-1.1.6/odbc/src/RcppExports.cpp | 19 +- odbc-1.1.6/odbc/src/connection.cpp | 83 +++++++-- odbc-1.1.6/odbc/src/nanodbc/nanodbc.cpp | 64 ++----- odbc-1.1.6/odbc/src/nanodbc/nanodbc.h | 8 odbc-1.1.6/odbc/src/odbc_connection.cpp | 9 odbc-1.1.6/odbc/src/odbc_connection.h | 3 25 files changed, 319 insertions(+), 190 deletions(-)
Title: Measurement Units for R Vectors
Description: Support for measurement units in R vectors, matrices
and arrays: automatic propagation, conversion, derivation
and simplification of units; raising errors in case of unit
incompatibility. Compatible with the POSIXct, Date and difftime
classes. Uses the UNIDATA udunits library and unit database for
unit compatibility checking and conversion.
Author: Edzer Pebesma [aut, cre] (<https://orcid.org/0000-0001-8049-7069>),
Thomas Mailund [aut],
Tomasz Kalinowski [aut],
James Hiebert [ctb],
Iñaki Ucar [ctb] (<https://orcid.org/0000-0001-6403-5550>)
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between units versions 0.5-1 dated 2018-01-08 and 0.6-0 dated 2018-06-09
units-0.5-1/units/man/install_conversion_function.Rd |only units-0.5-1/units/man/matmult.Rd |only units-0.6-0/units/DESCRIPTION | 27 +- units-0.6-0/units/MD5 | 87 ++++--- units-0.6-0/units/NAMESPACE | 16 - units-0.6-0/units/NEWS.md | 16 + units-0.6-0/units/R/RcppExports.R |only units-0.6-0/units/R/arith.R | 97 ++++---- units-0.6-0/units/R/conversion.R | 38 +-- units-0.6-0/units/R/deprecated.R | 7 units-0.6-0/units/R/init.R |only units-0.6-0/units/R/make_units.R | 42 ++- units-0.6-0/units/R/math.R | 31 +- units-0.6-0/units/R/misc.R | 44 ++-- units-0.6-0/units/R/options.R | 23 +- units-0.6-0/units/R/plot.R | 14 - units-0.6-0/units/R/set_units.R | 15 + units-0.6-0/units/R/summaries.R | 45 +--- units-0.6-0/units/R/symbolic_units.R | 18 + units-0.6-0/units/R/ud_units.R | 12 - units-0.6-0/units/R/udunits.R |only units-0.6-0/units/R/user_conversion.R | 176 ++++------------ units-0.6-0/units/R/valid_udunits.R | 31 +- units-0.6-0/units/TODO | 31 ++ units-0.6-0/units/build/vignette.rds |binary units-0.6-0/units/cleanup |only units-0.6-0/units/configure |only units-0.6-0/units/configure.ac |only units-0.6-0/units/inst/doc/measurement_units_in_R.html | 52 +++- units-0.6-0/units/inst/doc/units.html | 118 +++++----- units-0.6-0/units/inst/include |only units-0.6-0/units/inst/share |only units-0.6-0/units/man/as_units.Rd | 12 - units-0.6-0/units/man/install_conversion_constant.Rd | 30 +- units-0.6-0/units/man/install_symbolic_unit.Rd | 15 - units-0.6-0/units/man/units.Rd | 5 units-0.6-0/units/man/units_options.Rd | 15 - units-0.6-0/units/src |only units-0.6-0/units/tests/testthat/test_arith.R | 27 ++ units-0.6-0/units/tests/testthat/test_conversion.R | 34 ++- units-0.6-0/units/tests/testthat/test_math.R | 5 units-0.6-0/units/tests/testthat/test_unit_creation.R | 11 - units-0.6-0/units/tests/testthat/test_user_conversion.R | 25 +- units-0.6-0/units/tools |only units-0.6-0/units/vignettes/measurement_units_in_R.bib | 3 45 files changed, 616 insertions(+), 506 deletions(-)
Title: Generate Functions to Get or Set Global Options
Description: It provides more configurations on the option values such as validation
and filtering on the values, making options invisible or private.
Author: Zuguang Gu
Maintainer: Zuguang Gu <z.gu@dkfz.de>
Diff between GlobalOptions versions 0.0.13 dated 2018-03-15 and 0.1.0 dated 2018-06-09
DESCRIPTION | 13 LICENSE |only MD5 | 40 + NAMESPACE | 18 NEWS | 11 R/class.R | 144 ++++++ R/setGlobalOptions.R | 344 ++++++++++++---- build/vignette.rds |binary inst/doc/GlobalOptions.R | 134 ++++-- inst/doc/GlobalOptions.Rmd | 425 +++++++++++-------- inst/doc/GlobalOptions.html | 577 +++++++++++++++++---------- man/Assign.GlobalOptionsFun.rd | 12 man/Dot.DollarNames.GlobalOptionsFun.rd |only man/Dot.v.rd |only man/Extract.GlobalOptionsFun.rd |only man/ExtractExtract.GlobalOptionsFun.rd |only man/ExtractExtractAssign.GlobalOptionsFun.rd |only man/Subset.GlobalOptionsFun.rd | 8 man/Subset.InternalOptionValue.rd |only man/dump_opt.rd |only man/print.GlobalOptionsFun.rd |only man/setGlobalOptions.rd | 34 - man/set_opt.rd |only tests/testthat/test.R | 234 ++++++---- vignettes/GlobalOptions.Rmd | 425 +++++++++++-------- vignettes/custom.css | 2 26 files changed, 1610 insertions(+), 811 deletions(-)
Title: Analysis and Visualisation of Ecological Communities
Description: Provides a flexible, extendable representation of an ecological community and a range of functions for analysis and visualisation, focusing on food web, body mass and numerical abundance data. Allows inter-web comparisons such as examining changes in community structure over environmental, temporal or spatial gradients.
Author: Lawrence Hudson with contributions from Dan Reuman and Rob Emerson
Maintainer: Lawrence Hudson <quicklizard@googlemail.com>
Diff between cheddar versions 0.1-631 dated 2016-10-10 and 0.1-631.1 dated 2018-06-09
DESCRIPTION | 7 ++++--- MD5 | 33 +++++++++++++++++---------------- NAMESPACE | 8 ++++++++ build |only data/Benguela.RData |binary data/BroadstoneStream.RData |binary data/ChesapeakeBay.RData |binary data/Millstream.RData |binary data/SkipwithPond.RData |binary data/TL84.RData |binary data/TL86.RData |binary data/YthanEstuary.RData |binary data/pHWebs.RData |binary inst/doc/CheddarQuickstart.pdf |binary inst/doc/Collections.pdf |binary inst/doc/Community.pdf |binary inst/doc/ImportExport.pdf |binary inst/doc/PlotsAndStats.pdf |binary 18 files changed, 29 insertions(+), 19 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2010-04-02 0.2
2009-06-03 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2011-12-21 1.0
Title: A Collection of Handy, Useful Functions
Description: A set of little functions that have been found useful to do little
odds and ends such as plotting the results of K-means clustering, substituting
special text characters, viewing parts of a data.frame, constructing formulas
from text and building design and response matrices.
Author: Jared P. Lander [cre, aut],
Nicholas Galasinao [ctb],
Joshua Kraut [ctb],
Daniel Chen [ctb]
Maintainer: Jared P. Lander <packages@jaredlander.com>
Diff between useful versions 1.2.4 dated 2018-05-20 and 1.2.5 dated 2018-06-09
useful-1.2.4/useful/man/plot.Rd |only useful-1.2.5/useful/DESCRIPTION | 6 - useful-1.2.5/useful/MD5 | 20 +++--- useful-1.2.5/useful/NAMESPACE | 3 useful-1.2.5/useful/NEWS.md | 3 useful-1.2.5/useful/R/corner.r | 2 useful-1.2.5/useful/R/tsPlot.r | 72 +++++++++++++---------- useful-1.2.5/useful/man/autoplot.acf.Rd |only useful-1.2.5/useful/man/compare.list.Rd | 2 useful-1.2.5/useful/man/corner.Rd | 2 useful-1.2.5/useful/man/plot.acf.Rd | 25 +------ useful-1.2.5/useful/tests/testthat/test-tsplot.r | 53 ++++++++++------ 12 files changed, 101 insertions(+), 87 deletions(-)
Title: Multivariate Normality Tests
Description: Performs multivariate normality tests and graphical approaches and
implements multivariate outlier detection and univariate normality of marginal
distributions through plots and tests (Korkmaz et al, (2014), <https://journal.r-project.org/archive/2014-2/korkmaz-goksuluk-zararsiz.pdf>).
Author: Selcuk Korkmaz [aut, cre],
Dincer Goksuluk [aut],
Gokmen Zararsiz [aut]
Maintainer: Selcuk Korkmaz <selcukorkmaz@gmail.com>
Diff between MVN versions 5.3 dated 2018-05-07 and 5.4 dated 2018-06-09
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/mvn.R | 10 ++++------ inst/doc/MVN.pdf |binary 4 files changed, 11 insertions(+), 13 deletions(-)
Title: Global Optimization by Differential Evolution in C++
Description: An efficient C++ based implementation of the 'DEoptim'
function which performs global optimization by differential evolution.
Its creation was motivated by trying to see if the old approximation "easier,
shorter, faster: pick any two" could in fact be extended to achieving all
three goals while moving the code from plain old C to modern C++. The
initial version did in fact do so, but a good part of the gain was due to
an implicit code review which eliminated a few inefficiencies which have
since been eliminated in 'DEoptim'.
Author: Dirk Eddelbuettel extending DEoptim (by David Ardia, Katharine Mullen,
Brian Peterson, Joshua Ulrich) which itself is based on DE-Engine (by Rainer Storn)
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppDE versions 0.1.5 dated 2016-01-22 and 0.1.6 dated 2018-06-09
ChangeLog | 59 ++++++++++++++++++++++ DESCRIPTION | 8 +-- MD5 | 33 ++++++------ NAMESPACE | 2 R/DEoptim.R | 15 +++-- R/RcppExports.R | 8 ++- README.md | 2 build/vignette.rds |binary cleanup | 2 inst/doc/RcppDE.pdf |binary man/DEoptim.control.Rd | 36 +++++--------- src/Makevars | 13 +++-- src/RcppExports.cpp | 34 ++++++++++--- src/deoptim.cpp | 19 +++++-- src/devol.cpp | 126 ++++++++++++++++++++++++++++--------------------- src/evaluate.h | 29 +++++++---- tests/compTest.R | 92 ++++++++++++++++++++--------------- tests/rosenbrock.R |only 18 files changed, 309 insertions(+), 169 deletions(-)
Title: BiCluster Algorithms
Description: The main function biclust() provides several algorithms to
find biclusters in two-dimensional data: Cheng and Church (2000, ISBN:1-57735-115-0),
spectral (2003) <doi:10.1101/gr.648603>, plaid model (2005) <doi:10.1016/j.csda.2004.02.003>, xmotifs (2003) <doi:10.1142/9789812776303_0008> and bimax (2006) <doi:10.1093/bioinformatics/btl060>. In addition, the
package provides methods for data preprocessing (normalization
and discretisation), visualisation, and validation of bicluster
solutions.
Author: Sebastian Kaiser, Rodrigo Santamaria, Tatsiana Khamiakova,
Martin Sill, Roberto Theron, Luis Quintales, Friedrich
Leisch and Ewoud De Troyer.
Maintainer: ORPHANED
Diff between biclust versions 2.0.0 dated 2018-05-18 and 2.0.1 dated 2018-06-09
DESCRIPTION | 23 ++++++++++++++--------- MD5 | 4 ++-- src/rbimax.c | 36 +++++++++++++++++++++++++++--------- 3 files changed, 43 insertions(+), 20 deletions(-)
Title: Evaluation of Surrogate Endpoints in Clinical Trials
Description: In a clinical trial, it frequently occurs that the most credible outcome to evaluate the effectiveness of a new therapy (the true endpoint) is difficult to measure. In such a situation, it can be an effective strategy to replace the true endpoint by a (bio)marker that is easier to measure and that allows for a prediction of the treatment effect on the true endpoint (a surrogate endpoint). The package 'Surrogate' allows for an evaluation of the appropriateness of a candidate surrogate endpoint based on the meta-analytic, information-theoretic, and causal-inference frameworks. Part of this software has been developed using funding provided from the European Union's Seventh Framework Programme for research, technological development and demonstration under Grant Agreement no 602552.
Author: Wim Van der Elst, Paul Meyvisch, Ariel Alonso, Hannah M. Ensor, Christopher J. Weir & Geert Molenberghs
Maintainer: Wim Van der Elst <Wim.vanderelst@gmail.com>
Diff between Surrogate versions 0.8 dated 2018-06-02 and 0.9 dated 2018-06-09
DESCRIPTION | 6 +- MD5 | 6 +- R/PPE.BinBin.R | 155 ++++++++++++++++++++++++------------------------------ man/PPE.BinBin.Rd | 11 +-- 4 files changed, 80 insertions(+), 98 deletions(-)
Title: Kernel Smoothing
Description: Kernel smoothers for univariate and multivariate data, including densities, density derivatives, cumulative distributions, clustering, classification, density ridges, significant modal regions, and two-sample hypothesis tests. Duong (2017) <doi:10.18637/jss.v021.i07>.
Author: Tarn Duong <tarn.duong@gmail.com>
Maintainer: Tarn Duong <tarn.duong@gmail.com>
Diff between ks versions 1.11.1 dated 2018-04-22 and 1.11.2 dated 2018-06-09
CHANGELOG | 4 +++ DESCRIPTION | 11 +++++----- MD5 | 22 ++++++++++---------- R/kcde.R | 1 R/kda.R | 14 +++++++------ R/kdde.R | 1 R/kde.R | 1 R/kms.R | 3 +- R/kr.R | 1 R/normal.R | 58 ++++++++++++++++++++++-------------------------------- inst/doc/kde.pdf |binary man/ks-package.Rd | 2 - 12 files changed, 60 insertions(+), 58 deletions(-)
Title: Syntax Highlighting for R Source Code
Description: Provides syntax highlighting for R source code. Currently it
supports LaTeX and HTML output. Source code of other languages is supported
via Andre Simon's highlight package (<http://www.andre-simon.de>).
Author: Christopher Gandrud [ctb],
Qiang Li [ctb],
Yixuan Qiu [aut],
Yihui Xie [aut, cre]
Maintainer: Yihui Xie <xie@yihui.name>
Diff between highr versions 0.6 dated 2016-05-09 and 0.7 dated 2018-06-09
DESCRIPTION | 11 +++++------ MD5 | 18 +++++++++--------- NAMESPACE | 2 ++ NEWS | 7 +++++++ R/highlight.R | 20 ++++++++++++++++++++ build/vignette.rds |binary inst/doc/highr-custom.html | 4 ++-- inst/doc/highr-internals.html | 4 ++-- man/hi_andre.Rd | 1 + man/hilight.Rd | 13 +++++++------ 10 files changed, 55 insertions(+), 25 deletions(-)
Title: Highest (Posterior) Density Intervals
Description: A generic function and a set of methods to calculate highest density intervals for a variety of classes of objects which can specify a probability density distribution, including MCMC output, fitted density objects, and functions.
Author: Mike Meredith and John Kruschke
Maintainer: Mike Meredith <mmeredith@wcs.org>
Diff between HDInterval versions 0.1.3 dated 2016-05-13 and 0.2.0 dated 2018-06-09
DESCRIPTION | 8 ++++---- MD5 | 15 +++++++++------ NAMESPACE | 4 +++- NEWS | 22 +++++++++++++--------- R/hdi.R | 2 +- R/inverseCDF.R |only README | 6 +++--- inst/tests/testthat/test-inverseCDF.R |only man/hdi.Rd | 4 ++-- man/inverseCDF.Rd |only 10 files changed, 35 insertions(+), 26 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-05-21 0.9.1-2
2018-05-19 0.9.1-0
2018-02-07 0.9.0-3
2017-11-09 0.9.0-1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-06-03 0.7.2-2
2018-05-19 0.7.2-1
2017-10-13 0.6-1
2017-10-05 0.6-0
2017-03-28 0.5-6
2016-11-13 0.5-5
2015-10-21 0.5-1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-05-17 1.1.2
Title: Data for Trails in the United States from the Rails-to-Trails
Conservancy
Description: Rail trail data from the excellent 'TrailLink' website, sponsored by the
Rails-to-Trails Conservancy <https://www.traillink.com/>. Includes information
(such as name, length, surface, reviews, and trailhead latitude and longitude) on
3,846 trails and 24,413 reviews in every state in the United States. Data can be
used to better understand recreational trail use in the United States and for
examples / teaching, particularly examples and teaching involving hierarchical
or repeated measures data.
Author: Joshua Rosenberg [aut, cre],
Aaron Rosenberg [ctb]
Maintainer: Joshua Rosenberg <jmichaelrosenberg@gmail.com>
Diff between railtrails versions 0.0.3 dated 2018-02-04 and 0.1.1 dated 2018-06-09
DESCRIPTION | 21 ++++++---- MD5 | 16 ++++---- NEWS.md | 9 ++++ README.md | 75 +++++++++++++++++++------------------- build/vignette.rds |binary data/railtrails.rda |binary inst/doc/intro_to_railtrails.Rmd | 2 - inst/doc/intro_to_railtrails.html | 49 ++++++++++++------------ vignettes/intro_to_railtrails.Rmd | 2 - 9 files changed, 91 insertions(+), 83 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-06-06 0.1.6
Title: Extreme Gradient Boosting
Description: Extreme Gradient Boosting, which is an efficient implementation
of the gradient boosting framework from Chen & Guestrin (2016) <doi:10.1145/2939672.2939785>.
This package is its R interface. The package includes efficient linear
model solver and tree learning algorithms. The package can automatically
do parallel computation on a single machine which could be more than 10
times faster than existing gradient boosting packages. It supports
various objective functions, including regression, classification and ranking.
The package is made to be extensible, so that users are also allowed to define
their own objectives easily.
Author: Tianqi Chen [aut],
Tong He [aut, cre],
Michael Benesty [aut],
Vadim Khotilovich [aut],
Yuan Tang [aut] (<https://orcid.org/0000-0001-5243-233X>),
Hyunsu Cho [aut],
Kailong Chen [aut],
Rory Mitchell [aut],
Ignacio Cano [aut],
Tianyi Zhou [aut],
Mu Li [aut],
Junyuan Xie [aut],
Min Lin [aut],
Yifeng Geng [aut],
Yutian Li [aut],
XGBoost contributors [cph] (base XGBoost implementation)
Maintainer: Tong He <hetong007@gmail.com>
Diff between xgboost versions 0.71.1 dated 2018-05-16 and 0.71.2 dated 2018-06-09
xgboost-0.71.1/xgboost/src/src/data/sparse_batch_page.h |only xgboost-0.71.2/xgboost/DESCRIPTION | 12 xgboost-0.71.2/xgboost/MD5 | 181 +- xgboost-0.71.2/xgboost/R/xgb.Booster.R | 7 xgboost-0.71.2/xgboost/inst/doc/discoverYourData.html | 2 xgboost-0.71.2/xgboost/inst/doc/xgboost.pdf |binary xgboost-0.71.2/xgboost/inst/doc/xgboostPresentation.html | 10 xgboost-0.71.2/xgboost/src/amalgamation/dmlc-minimum0.cc | 2 xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/any.h | 31 xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/base.h | 45 xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/blockingconcurrentqueue.h |only xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/common.h | 18 xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/concurrency.h | 51 xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/concurrentqueue.h |only xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/data.h | 120 + xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/endian.h |only xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/input_split_shuffle.h | 1 xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/io.h | 71 - xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/json.h | 200 ++ xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/logging.h | 153 +- xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/omp.h | 32 xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/optional.h | 79 + xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/parameter.h | 67 xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/recordio.h | 6 xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/registry.h | 3 xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/serializer.h | 20 xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/thread_group.h |only xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/thread_local.h | 10 xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/threadediter.h | 215 ++- xgboost-0.71.2/xgboost/src/dmlc-core/include/dmlc/type_traits.h | 30 xgboost-0.71.2/xgboost/src/dmlc-core/src/data.cc | 148 +- xgboost-0.71.2/xgboost/src/dmlc-core/src/data/basic_row_iter.h | 18 xgboost-0.71.2/xgboost/src/dmlc-core/src/data/csv_parser.h | 48 xgboost-0.71.2/xgboost/src/dmlc-core/src/data/disk_row_iter.h | 36 xgboost-0.71.2/xgboost/src/dmlc-core/src/data/libfm_parser.h | 24 xgboost-0.71.2/xgboost/src/dmlc-core/src/data/libsvm_parser.h | 33 xgboost-0.71.2/xgboost/src/dmlc-core/src/data/parser.h | 38 xgboost-0.71.2/xgboost/src/dmlc-core/src/data/row_block.h | 50 xgboost-0.71.2/xgboost/src/dmlc-core/src/data/text_parser.h | 131 + xgboost-0.71.2/xgboost/src/dmlc-core/src/io.cc | 44 xgboost-0.71.2/xgboost/src/dmlc-core/src/io/cached_input_split.h | 4 xgboost-0.71.2/xgboost/src/dmlc-core/src/io/filesys.cc |only xgboost-0.71.2/xgboost/src/dmlc-core/src/io/filesys.h | 7 xgboost-0.71.2/xgboost/src/dmlc-core/src/io/hdfs_filesys.cc | 8 xgboost-0.71.2/xgboost/src/dmlc-core/src/io/indexed_recordio_split.cc |only xgboost-0.71.2/xgboost/src/dmlc-core/src/io/indexed_recordio_split.h |only xgboost-0.71.2/xgboost/src/dmlc-core/src/io/input_split_base.cc | 52 xgboost-0.71.2/xgboost/src/dmlc-core/src/io/input_split_base.h | 91 - xgboost-0.71.2/xgboost/src/dmlc-core/src/io/local_filesys.cc | 49 xgboost-0.71.2/xgboost/src/dmlc-core/src/io/recordio_split.h | 5 xgboost-0.71.2/xgboost/src/dmlc-core/src/io/s3_filesys.cc | 696 +++++++--- xgboost-0.71.2/xgboost/src/dmlc-core/src/io/s3_filesys.h | 37 xgboost-0.71.2/xgboost/src/dmlc-core/src/io/single_file_split.h | 6 xgboost-0.71.2/xgboost/src/dmlc-core/src/io/threaded_input_split.h | 20 xgboost-0.71.2/xgboost/src/dmlc-core/src/recordio.cc | 2 xgboost-0.71.2/xgboost/src/include/xgboost/data.h | 173 +- xgboost-0.71.2/xgboost/src/include/xgboost/gbm.h | 2 xgboost-0.71.2/xgboost/src/include/xgboost/learner.h | 4 xgboost-0.71.2/xgboost/src/include/xgboost/predictor.h | 4 xgboost-0.71.2/xgboost/src/include/xgboost/tree_model.h | 8 xgboost-0.71.2/xgboost/src/rabit/include/dmlc/base.h | 4 xgboost-0.71.2/xgboost/src/src/c_api/c_api.cc | 56 xgboost-0.71.2/xgboost/src/src/cli_main.cc | 3 xgboost-0.71.2/xgboost/src/src/common/compressed_iterator.h | 21 xgboost-0.71.2/xgboost/src/src/common/device_helpers.cuh | 20 xgboost-0.71.2/xgboost/src/src/common/hist_util.cc | 18 xgboost-0.71.2/xgboost/src/src/data/data.cc | 8 xgboost-0.71.2/xgboost/src/src/data/simple_csr_source.cc | 38 xgboost-0.71.2/xgboost/src/src/data/simple_csr_source.h | 12 xgboost-0.71.2/xgboost/src/src/data/simple_dmatrix.cc | 201 -- xgboost-0.71.2/xgboost/src/src/data/simple_dmatrix.h | 57 xgboost-0.71.2/xgboost/src/src/data/sparse_page_dmatrix.cc | 84 - xgboost-0.71.2/xgboost/src/src/data/sparse_page_dmatrix.h | 29 xgboost-0.71.2/xgboost/src/src/data/sparse_page_raw_format.cc | 18 xgboost-0.71.2/xgboost/src/src/data/sparse_page_source.cc | 22 xgboost-0.71.2/xgboost/src/src/data/sparse_page_source.h | 8 xgboost-0.71.2/xgboost/src/src/data/sparse_page_writer.cc | 14 xgboost-0.71.2/xgboost/src/src/data/sparse_page_writer.h |only xgboost-0.71.2/xgboost/src/src/gbm/gblinear.cc | 20 xgboost-0.71.2/xgboost/src/src/gbm/gbtree.cc | 16 xgboost-0.71.2/xgboost/src/src/learner.cc | 11 xgboost-0.71.2/xgboost/src/src/linear/coordinate_common.h | 30 xgboost-0.71.2/xgboost/src/src/linear/updater_gpu_coordinate.cu | 20 xgboost-0.71.2/xgboost/src/src/linear/updater_shotgun.cc | 10 xgboost-0.71.2/xgboost/src/src/objective/regression_obj.cc | 7 xgboost-0.71.2/xgboost/src/src/objective/regression_obj_gpu.cu | 4 xgboost-0.71.2/xgboost/src/src/predictor/cpu_predictor.cc | 26 xgboost-0.71.2/xgboost/src/src/predictor/gpu_predictor.cu | 22 xgboost-0.71.2/xgboost/src/src/tree/param.h | 1 xgboost-0.71.2/xgboost/src/src/tree/updater_basemaker-inl.h | 28 xgboost-0.71.2/xgboost/src/src/tree/updater_colmaker.cc | 63 xgboost-0.71.2/xgboost/src/src/tree/updater_gpu.cu | 13 xgboost-0.71.2/xgboost/src/src/tree/updater_gpu_hist.cu | 217 ++- xgboost-0.71.2/xgboost/src/src/tree/updater_histmaker.cc | 53 xgboost-0.71.2/xgboost/src/src/tree/updater_refresh.cc | 10 xgboost-0.71.2/xgboost/src/src/tree/updater_skmaker.cc | 16 96 files changed, 2735 insertions(+), 1549 deletions(-)
Title: Text Cleaning Tools
Description: Tools to clean and process text. Tools are geared at checking for substrings that
are not optimal for analysis and replacing or removing them (normalizing) with more
analysis friendly substrings (see Sproat, Black, Chen, Kumar, Ostendorf, & Richards
(2001) <doi:10.1006/csla.2001.0169>) or extracting them into new variables. For
example, emoticons are often used in text but not always easily handled by analysis
algorithms. The replace_emoticon() function replaces emoticons with word
equivalents.
Author: Tyler Rinker [aut, cre],
ctwheels StackOverflow [ctb]
Maintainer: Tyler Rinker <tyler.rinker@gmail.com>
Diff between textclean versions 0.7.3 dated 2018-04-24 and 0.9.2 dated 2018-06-09
DESCRIPTION | 43 +- MD5 | 125 ++++--- NAMESPACE | 13 NEWS | 41 ++ R/add_missing_endmark.R | 6 R/check_text.R | 428 ++++++++++++------------- R/check_text_logicals.R |only R/drop_row.R | 29 + R/fgsub.R | 160 +++++++++ R/filter_element.R | 9 R/filter_row.R | 34 +- R/glue-reexports.R | 2 R/has_endmark.R | 6 R/mgsub.R | 59 ++- R/replace_contraction.R | 10 R/replace_date.R | 16 R/replace_email.R |only R/replace_emoji.R | 19 - R/replace_emoticon.R | 23 + R/replace_grade.R | 8 R/replace_hash.R |only R/replace_incomplete.R | 14 R/replace_internet_slang.R | 3 R/replace_kerning.R | 26 + R/replace_money.R | 30 + R/replace_names.R | 18 - R/replace_non_ascii.R | 38 +- R/replace_number.R | 156 ++------- R/replace_tag.R |only R/replace_time.R | 3 R/replace_to.R |only R/replace_tokens.R | 25 + R/replace_url.R |only R/replace_word_elongation.R | 27 - R/strip.R | 45 +- R/sub_holder.R | 54 ++- R/sysdata.rda |binary R/utils.R | 106 +++++- README.md | 593 +++++++++++++++++++++++------------ data/DATA.rda |binary inst/CITATION | 4 man/add_missing_endmark.Rd | 3 man/check_text.Rd | 85 ++--- man/drop_row.Rd | 3 man/fgsub.Rd | 36 ++ man/mgsub.Rd | 18 - man/print.check_text.Rd | 6 man/print.which_are_locs.Rd |only man/replace_contraction.Rd | 4 man/replace_date.Rd | 5 man/replace_email.Rd |only man/replace_emoji.Rd | 6 man/replace_emoticon.Rd | 15 man/replace_hash.Rd |only man/replace_incomplete.Rd | 11 man/replace_kern.Rd | 10 man/replace_money.Rd | 6 man/replace_names.Rd | 5 man/replace_non_ascii.Rd | 11 man/replace_number.Rd | 21 - man/replace_tag.Rd |only man/replace_to.Rd |only man/replace_tokens.Rd | 17 - man/replace_url.Rd |only man/replace_word_elongation.Rd | 12 man/strip.Rd | 7 man/sub_holder.Rd | 14 man/which_are.Rd |only tests/testthat/test-replace_grade.R | 3 tests/testthat/test-replace_rating.R | 22 - 70 files changed, 1635 insertions(+), 858 deletions(-)