Title: Artificial Spatial and Spatiotemporal Densities on Bounded
Windows
Description: A utility package containing some simple tools to design and generate density functions on bounded regions in space and space-time, and simulate iid data therefrom. See Davies & Hazelton (2010) <doi:10.1002/sim.3995> for example.
Author: Anna K. Redmond and Tilman M. Davies
Maintainer: Tilman M. Davies <tdavies@maths.otago.ac.nz>
Diff between spagmix versions 0.3-0 dated 2018-07-21 and 0.3-1 dated 2018-09-10
DESCRIPTION | 12 ++++++------ MD5 | 12 +++++++----- NAMESPACE | 3 +-- NEWS | 10 ++++++++++ R/rgmix.R | 2 +- R/riw.R |only man/spagmix-internal.Rd |only man/spagmix-package.Rd | 4 ++-- 8 files changed, 27 insertions(+), 16 deletions(-)
Title: Simulation of Diffusion Processes
Description: It provides users with a wide range of tools to simulate, estimate, analyze, and visualize the dynamics of stochastic differential systems in both forms It<f4> and Stratonovich. Statistical analysis with parallel Monte Carlo and moment equations methods of SDE's. Enabled many searchers in different domains to use these equations to modeling practical problems in financial and actuarial modeling and other areas of application, e.g., modeling and simulate of first passage time problem in shallow water using the attractive center (Boukhetala K, 1996) ISBN:1-56252-342-2.
Author: Arsalane Chouaib Guidoum [cre, aut],
Kamal Boukhetala [aut]
Maintainer: Arsalane Chouaib Guidoum <acguidoum@usthb.dz>
Diff between Sim.DiffProc versions 4.0 dated 2017-11-28 and 4.1 dated 2018-09-10
Sim.DiffProc-4.0/Sim.DiffProc/inst/doc/Sim.DiffProc.R |only Sim.DiffProc-4.0/Sim.DiffProc/inst/doc/Sim.DiffProc.Rmd |only Sim.DiffProc-4.0/Sim.DiffProc/inst/doc/Sim.DiffProc.html |only Sim.DiffProc-4.0/Sim.DiffProc/vignettes/Sim.DiffProc.Rmd |only Sim.DiffProc-4.1/Sim.DiffProc/DESCRIPTION | 12 Sim.DiffProc-4.1/Sim.DiffProc/MD5 | 105 +-- Sim.DiffProc-4.1/Sim.DiffProc/NAMESPACE | 7 Sim.DiffProc-4.1/Sim.DiffProc/R/ABM.R | 16 Sim.DiffProc-4.1/Sim.DiffProc/R/BB.R | 14 Sim.DiffProc-4.1/Sim.DiffProc/R/BM.R | 22 Sim.DiffProc-4.1/Sim.DiffProc/R/Euler.R | 23 Sim.DiffProc-4.1/Sim.DiffProc/R/GBM.R | 18 Sim.DiffProc-4.1/Sim.DiffProc/R/HWV.R | 33 Sim.DiffProc-4.1/Sim.DiffProc/R/Heun.R | 3 Sim.DiffProc-4.1/Sim.DiffProc/R/MCM.sde.R | 35 - Sim.DiffProc-4.1/Sim.DiffProc/R/MEM.sde.r | 38 - Sim.DiffProc-4.1/Sim.DiffProc/R/Milstein.R | 3 Sim.DiffProc-4.1/Sim.DiffProc/R/OU.R | 16 Sim.DiffProc-4.1/Sim.DiffProc/R/PredCorr.R | 3 Sim.DiffProc-4.1/Sim.DiffProc/R/RK.R | 3 Sim.DiffProc-4.1/Sim.DiffProc/R/SMilstein.R | 3 Sim.DiffProc-4.1/Sim.DiffProc/R/STS.R | 13 Sim.DiffProc-4.1/Sim.DiffProc/R/Tex.sde.r |only Sim.DiffProc-4.1/Sim.DiffProc/R/bridgesde.R | 296 +++++--- Sim.DiffProc-4.1/Sim.DiffProc/R/dsde.r | 14 Sim.DiffProc-4.1/Sim.DiffProc/R/fitsde.R | 53 - Sim.DiffProc-4.1/Sim.DiffProc/R/ftpsde.R | 4 Sim.DiffProc-4.1/Sim.DiffProc/R/rsde.R | 22 Sim.DiffProc-4.1/Sim.DiffProc/R/snssde.R | 434 ++++++++---- Sim.DiffProc-4.1/Sim.DiffProc/R/st.int.R | 65 + Sim.DiffProc-4.1/Sim.DiffProc/R/utils.R | 466 ++++++++----- Sim.DiffProc-4.1/Sim.DiffProc/R/zzz.r | 6 Sim.DiffProc-4.1/Sim.DiffProc/README.md |only Sim.DiffProc-4.1/Sim.DiffProc/build/vignette.rds |binary Sim.DiffProc-4.1/Sim.DiffProc/inst/NEWS.Rd | 11 Sim.DiffProc-4.1/Sim.DiffProc/inst/doc/bridgesde.Rmd | 5 Sim.DiffProc-4.1/Sim.DiffProc/inst/doc/bridgesde.html | 489 +++++++------- Sim.DiffProc-4.1/Sim.DiffProc/inst/doc/fitsde.Rmd | 5 Sim.DiffProc-4.1/Sim.DiffProc/inst/doc/fitsde.html | 81 +- Sim.DiffProc-4.1/Sim.DiffProc/inst/doc/fptsde.Rmd | 5 Sim.DiffProc-4.1/Sim.DiffProc/inst/doc/fptsde.html | 339 ++++----- Sim.DiffProc-4.1/Sim.DiffProc/inst/doc/mcmsde.Rmd | 5 Sim.DiffProc-4.1/Sim.DiffProc/inst/doc/mcmsde.html | 45 - Sim.DiffProc-4.1/Sim.DiffProc/inst/doc/sdetotex.R |only Sim.DiffProc-4.1/Sim.DiffProc/inst/doc/sdetotex.Rmd |only Sim.DiffProc-4.1/Sim.DiffProc/inst/doc/sdetotex.html |only Sim.DiffProc-4.1/Sim.DiffProc/inst/doc/snssde.Rmd | 5 Sim.DiffProc-4.1/Sim.DiffProc/inst/doc/snssde.html | 459 ++++++------- Sim.DiffProc-4.1/Sim.DiffProc/man/HWV.Rd | 4 Sim.DiffProc-4.1/Sim.DiffProc/man/MCM.sde.Rd | 8 Sim.DiffProc-4.1/Sim.DiffProc/man/Sim.DiffProc-package.Rd | 7 Sim.DiffProc-4.1/Sim.DiffProc/man/TEX.sde.Rd |only Sim.DiffProc-4.1/Sim.DiffProc/man/rsde3d.Rd | 4 Sim.DiffProc-4.1/Sim.DiffProc/vignettes/bridgesde.Rmd | 5 Sim.DiffProc-4.1/Sim.DiffProc/vignettes/fitsde.Rmd | 5 Sim.DiffProc-4.1/Sim.DiffProc/vignettes/fptsde.Rmd | 5 Sim.DiffProc-4.1/Sim.DiffProc/vignettes/mcmsde.Rmd | 5 Sim.DiffProc-4.1/Sim.DiffProc/vignettes/sdetotex.Rmd |only Sim.DiffProc-4.1/Sim.DiffProc/vignettes/snssde.Rmd | 5 59 files changed, 1875 insertions(+), 1349 deletions(-)
Title: 'Lex' and 'Yacc'
Description: R implementation of the common parsing tools 'lex' and 'yacc'.
Author: Marek Jagielski [aut, cre, cph],
David M. Beazley [aut, cph],
Yasutaka Tanaka [ctb],
Henrico Witvliet [ctb]
Maintainer: Marek Jagielski <marek.jagielski@gmail.com>
Diff between rly versions 1.6.1 dated 2018-04-24 and 1.6.2 dated 2018-09-10
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- R/yacc.R | 4 ++-- 3 files changed, 8 insertions(+), 8 deletions(-)
Title: Working with Files from 'LexisNexis'
Description: My PhD supervisor once told me that everyone doing newspaper
analysis starts by writing code to read in files from the 'LexisNexis' newspaper
archive (retrieved e.g., from <http://www.nexis.com/> or any of the partner
sites). However, while this is a nice exercise I do recommend, not everyone has
the time. This package takes TXT files downloaded from the newspaper archive of
'LexisNexis', reads them into R and offers functions for further processing.
Author: Johannes Gruber [aut, cre]
Maintainer: Johannes Gruber <j.gruber.1@research.gla.ac.uk>
Diff between LexisNexisTools versions 0.1.2 dated 2018-04-09 and 0.2.0 dated 2018-09-10
LexisNexisTools-0.1.2/LexisNexisTools/R/lnt_checkFiles.R |only LexisNexisTools-0.1.2/LexisNexisTools/R/lnt_read.R |only LexisNexisTools-0.1.2/LexisNexisTools/R/lnt_rename.R |only LexisNexisTools-0.1.2/LexisNexisTools/R/lnt_sample.R |only LexisNexisTools-0.1.2/LexisNexisTools/R/lnt_similarity.R |only LexisNexisTools-0.1.2/LexisNexisTools/R/zzz.R |only LexisNexisTools-0.1.2/LexisNexisTools/man/LNToutput-class.Rd |only LexisNexisTools-0.2.0/LexisNexisTools/DESCRIPTION | 43 LexisNexisTools-0.2.0/LexisNexisTools/MD5 | 58 - LexisNexisTools-0.2.0/LexisNexisTools/NAMESPACE | 39 LexisNexisTools-0.2.0/LexisNexisTools/R/LexisNexisTools.R |only LexisNexisTools-0.2.0/LexisNexisTools/README.md | 552 +++++++--- LexisNexisTools-0.2.0/LexisNexisTools/build |only LexisNexisTools-0.2.0/LexisNexisTools/inst/CITATION | 4 LexisNexisTools-0.2.0/LexisNexisTools/inst/doc |only LexisNexisTools-0.2.0/LexisNexisTools/man/LNToutput.Rd |only LexisNexisTools-0.2.0/LexisNexisTools/man/LNToutput_methods.Rd |only LexisNexisTools-0.2.0/LexisNexisTools/man/lnt_add.Rd |only LexisNexisTools-0.2.0/LexisNexisTools/man/lnt_asDate.Rd |only LexisNexisTools-0.2.0/LexisNexisTools/man/lnt_checkFiles.Rd | 58 - LexisNexisTools-0.2.0/LexisNexisTools/man/lnt_convert.Rd |only LexisNexisTools-0.2.0/LexisNexisTools/man/lnt_diff.Rd |only LexisNexisTools-0.2.0/LexisNexisTools/man/lnt_lookup.Rd |only LexisNexisTools-0.2.0/LexisNexisTools/man/lnt_read.Rd | 75 - LexisNexisTools-0.2.0/LexisNexisTools/man/lnt_rename.Rd | 44 LexisNexisTools-0.2.0/LexisNexisTools/man/lnt_sample.Rd | 4 LexisNexisTools-0.2.0/LexisNexisTools/man/lnt_similarity.Rd | 74 + LexisNexisTools-0.2.0/LexisNexisTools/tests |only LexisNexisTools-0.2.0/LexisNexisTools/vignettes |only 29 files changed, 676 insertions(+), 275 deletions(-)
More information about LexisNexisTools at CRAN
Permanent link
Title: Importing and Manipulating Symmetric Input-Output Tables
Description: Pre-processing tasks related to working with Eurostat's symmetric input-output
tables and provide basic input-output economics calculations. The package is
a part of rOpenGov <http://ropengov.github.io/> to open source open government initiatives.
Author: Daniel Antal
Maintainer: Daniel Antal <daniel.antal@ceemid.eu>
Diff between iotables versions 0.3.2 dated 2018-09-01 and 0.3.3 dated 2018-09-10
DESCRIPTION | 7 - MD5 | 61 ++++++----- NAMESPACE | 3 NEWS.md | 15 ++ R/backward_linkages.R | 7 - R/conforming_vector_create.R | 2 R/employment_get.R | 128 +++++++++++++++++------- R/equation_solve.R | 3 R/forward_linkages.R |only R/gva_get.R | 4 R/input_coefficient_matrix_create.R | 36 +++++- R/iotable_get.R | 54 +++++++--- R/leontieff_inverse_create.R | 3 R/leontieff_matrix_create.R | 4 R/multiplier_create.R | 2 R/output_coefficient_matrix_create.R |only R/output_get.R | 32 ++++-- R/output_multiplier_create.R |only R/use_table_get.R | 16 +-- build |only data/metadata.rda |binary inst |only man/backward_linkages.Rd | 7 - man/conforming_vector_create.Rd | 2 man/employment_get.Rd | 11 +- man/forward_linkages.Rd |only man/input_coefficient_matrix_create.Rd | 12 +- man/leontieff_inverse_create.Rd | 3 man/leontieff_matrix_create.Rd | 4 man/output_coefficient_matrix_create.Rd |only man/output_multiplier_create.Rd |only tests/testthat/test_forward_linkages.R | 36 +++--- tests/testthat/test_output_coefficient_matrix.R |only tests/testthat/test_output_multipliers.R |only tests/testthat/test_use_table_get.R | 22 ++-- vignettes |only 36 files changed, 314 insertions(+), 160 deletions(-)
Title: Toolbox for Model Building and Forecasting
Description: Implements functions and instruments for regression model building and its
application to forecasting. The main scope of the package is in variables selection
and models specification for cases of time series data. This includes promotional
modelling, selection between different dynamic regressions with non-standard
distributions of errors, selection based on cross validation, solutions to the fat
regression model problem and more. Models developed in the package are tailored
specifically for forecasting purposes. So as a results there are several methods
that allow producing forecasts from these models and visualising them.
Author: Ivan Svetunkov [aut, cre] (Lecturer at Centre for Marketing Analytics
and Forecasting, Lancaster University, UK)
Maintainer: Ivan Svetunkov <ivan@svetunkov.ru>
Diff between greybox versions 0.3.0 dated 2018-08-06 and 0.3.1 dated 2018-09-10
greybox-0.3.0/greybox/man/reexports.Rd |only greybox-0.3.1/greybox/DESCRIPTION | 14 greybox-0.3.1/greybox/MD5 | 67 +-- greybox-0.3.1/greybox/NAMESPACE | 34 + greybox-0.3.1/greybox/NEWS | 50 ++ greybox-0.3.1/greybox/R/alm.R | 529 ++++++++++++++++++----- greybox-0.3.1/greybox/R/association.R |only greybox-0.3.1/greybox/R/determination.R | 4 greybox-0.3.1/greybox/R/graphmaker.R |only greybox-0.3.1/greybox/R/greybox-package.R | 11 greybox-0.3.1/greybox/R/isFunctions.R |only greybox-0.3.1/greybox/R/lmCombine.R | 107 ++-- greybox-0.3.1/greybox/R/lmDynamic.R | 90 ++-- greybox-0.3.1/greybox/R/methods.R | 597 +++++++++++++++++++++++---- greybox-0.3.1/greybox/R/rmc.R | 221 ++++----- greybox-0.3.1/greybox/R/stepwise.R | 189 ++++++-- greybox-0.3.1/greybox/README.md | 9 greybox-0.3.1/greybox/build/partial.rdb |binary greybox-0.3.1/greybox/build/vignette.rds |binary greybox-0.3.1/greybox/inst/doc/alm.R |only greybox-0.3.1/greybox/inst/doc/alm.Rmd |only greybox-0.3.1/greybox/inst/doc/alm.html |only greybox-0.3.1/greybox/inst/doc/greybox.R | 4 greybox-0.3.1/greybox/inst/doc/greybox.Rmd | 27 - greybox-0.3.1/greybox/inst/doc/greybox.html | 54 +- greybox-0.3.1/greybox/inst/doc/ro.html | 24 - greybox-0.3.1/greybox/man/alm.Rd | 84 +++ greybox-0.3.1/greybox/man/errorType.Rd | 2 greybox-0.3.1/greybox/man/graphmaker.Rd |only greybox-0.3.1/greybox/man/greybox.Rd | 9 greybox-0.3.1/greybox/man/isFunctions.Rd |only greybox-0.3.1/greybox/man/lmCombine.Rd | 35 + greybox-0.3.1/greybox/man/lmDynamic.Rd | 39 + greybox-0.3.1/greybox/man/pointIC.Rd | 2 greybox-0.3.1/greybox/man/pointLik.Rd | 2 greybox-0.3.1/greybox/man/predict.greybox.Rd |only greybox-0.3.1/greybox/man/rmc.Rd | 64 +- greybox-0.3.1/greybox/man/stepwise.Rd | 24 - greybox-0.3.1/greybox/vignettes/alm.Rmd |only greybox-0.3.1/greybox/vignettes/greybox.Rmd | 27 - 40 files changed, 1724 insertions(+), 595 deletions(-)
Title: Various Utilities for Microbial Genomics and Metagenomics
Description: A collection of functions for microbial ecology and other
applications of genomics and metagenomics. Companion package for the
Enveomics Collection (Rodriguez-R, L.M. and Konstantinidis, K.T., 2016
<DOI:10.7287/peerj.preprints.1900v1>).
Author: Luis M. Rodriguez-R [aut, cre]
Maintainer: Luis M. Rodriguez-R <lmrodriguezr@gmail.com>
Diff between enveomics.R versions 1.3.3 dated 2018-08-27 and 1.4.1 dated 2018-09-10
DESCRIPTION | 6 MD5 | 12 - R/recplot2.R | 318 +++++++++++++++++++----------------- README.md | 3 man/enve.RecPlot2-class.Rd | 1 man/enve.recplot2.Rd | 18 +- man/enve.recplot2.extractWindows.Rd | 14 - 7 files changed, 203 insertions(+), 169 deletions(-)
Title: Stability Analysis of Genotype by Environment Interaction (GEI)
Description: Functionalities to perform Stability Analysis of Genotype by Environment Interaction (GEI) to identify superior and stable genotypes under diverse environments. It performs Eberhart & Russel's ANOVA (1966) (<doi:10.2135/cropsci1966.0011183X000600010011x>), Finlay and Wilkinson (1963) Joint Linear Regression (<doi:10.1071/AR9630742>), Wricke (1962, 1964) Ecovalence, Shukla's stability variance parameter (1972) (<doi:10.1038/hdy.1972.87>) and Kang's (1991) (<doi:10.2134/agronj1991.00021962008300010037x>) simultaneous selection for high yielding and stable parameter.
Author: Muhammad Yaseen [aut, cre],
Kent M. Eskridge [aut, ctb]
Maintainer: Muhammad Yaseen <myaseen208@gmail.com>
Diff between stability versions 0.3.0 dated 2018-08-23 and 0.4.0 dated 2018-09-10
DESCRIPTION | 6 +- MD5 | 30 ++++++------- NEWS.md | 11 +++++ R/add_anova.R | 40 +++++++++--------- R/ammi.R | 46 ++++++++++++--------- R/ammi_biplot.R | 28 +++++-------- R/er_anova.R | 60 ++++++++++++++++++--------- R/ge_means.R | 8 +-- R/stab_asv.R | 74 ++++++++++++++++++++-------------- R/stab_dist.R | 78 ++++++++++++++++++++---------------- R/stab_fox.R | 23 +++++----- R/stab_kang.R | 74 ++++++++++++++++++++-------------- R/stab_masv.R | 76 ++++++++++++++++++++--------------- R/stab_measures.R | 86 +++++++++++++++++----------------------- R/stab_par.R | 116 +++++++++++++++++++++++++++--------------------------- R/stab_reg.R | 44 ++++++-------------- 16 files changed, 429 insertions(+), 371 deletions(-)
Title: Measuring Agreement Using Sklar's Omega Coefficient
Description: Provides tools for applying Sklar's Omega (Hughes, 2018) <arXiv:1803.02734>
methodology to nominal, ordinal, interval, or ratio scores. The framework can
accommodate any number of units, any number of coders, and missingness; and
can be used to measure agreement with a gold standard, intra-coder agreement,
and/or inter-coder agreement. Frequentist inference is supported for all levels
of measurement. Bayesian inference is supported for interval and ratio scores.
Author: John Hughes <jphughesjr@gmail.com>
Maintainer: John Hughes <jphughesjr@gmail.com>
Diff between sklarsomega versions 1.0 dated 2018-05-24 and 2.0 dated 2018-09-10
DESCRIPTION | 16 MD5 | 12 NAMESPACE | 7 R/sklarsomega.R | 749 +++++++++++++++++++++++++++++++++++++---- inst/doc/sklarsomega_arXiv.pdf |only man/simulate.sklarsomega.Rd | 2 man/sklars.omega.Rd | 17 man/sklars.omega.bayes.Rd |only 8 files changed, 720 insertions(+), 83 deletions(-)
Title: Sparse Identification of Nonlinear Dynamics
Description: This implements the Brunton et al (2016; PNAS <doi:10.1073/pnas.1517384113>) sparse
identification algorithm for finding ordinary differential equations for a measured
system from raw data (SINDy). The package includes a set of additional tools for
working with raw data, with an emphasis on cognitive science applications (Dale
and Bhat, in press <doi:10.1016/j.cogsys.2018.06.020>).
Author: Rick Dale and Harish S. Bhat
Maintainer: Rick Dale <racdale@gmail.com>
Diff between sindyr versions 0.2 dated 2018-08-16 and 0.2.1 dated 2018-09-10
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/sindy.R | 4 ++-- man/sindyr-package.Rd | 4 ++-- 4 files changed, 11 insertions(+), 11 deletions(-)
Title: National Eutrophication Survey Data
Description: Serves data from the United States Environmental Protection Agency (USEPA) National Eutrophication Survey <https://www.epa.gov/national-aquatic-resource-surveys>.
Author: Joseph Stachelek [aut, cre] (<https://orcid.org/0000-0002-5924-2464>)
Maintainer: Joseph Stachelek <stachel2@msu.edu>
Diff between nesRdata versions 0.1.0 dated 2017-11-09 and 0.2.0 dated 2018-09-10
DESCRIPTION | 8 +-- MD5 | 22 +++++---- NEWS.md | 14 +++++ R/get.R | 12 ++++- R/load.R | 31 +++++-------- R/nesRdata-package.R | 44 ++++++++++++++++++ R/utils.R | 7 ++ README.md | 121 +++++++++++++++++++++++++++++++-------------------- data/nes.rda |binary inst |only man/nes.Rd | 45 ++++++++++++++++++ man/nes_get.Rd | 6 +- 12 files changed, 226 insertions(+), 84 deletions(-)
Title: Language Server Protocol
Description: An implementation of the Language Server Protocol for R. The Language Server protocol is used by an editor client to integrate features like auto completion. See <https://microsoft.github.io/language-server-protocol> for details.
Author: Randy Lai
Maintainer: Randy Lai <randy.cs.lai@gmail.com>
Diff between languageserver versions 0.2.4 dated 2018-08-27 and 0.2.5 dated 2018-09-10
languageserver-0.2.4/languageserver/R/collections.R |only languageserver-0.2.4/languageserver/tests/testthat/test_queue.R |only languageserver-0.2.5/languageserver/DESCRIPTION | 14 - languageserver-0.2.5/languageserver/MD5 | 30 +- languageserver-0.2.5/languageserver/NEWS.md | 20 + languageserver-0.2.5/languageserver/R/document.R | 51 ++++ languageserver-0.2.5/languageserver/R/handlers-general.R | 4 languageserver-0.2.5/languageserver/R/handlers-textsync.R | 12 - languageserver-0.2.5/languageserver/R/handlers-workspace.R | 6 languageserver-0.2.5/languageserver/R/languageclient.R |only languageserver-0.2.5/languageserver/R/languageserver.R | 115 +++++---- languageserver-0.2.5/languageserver/R/utils.R | 16 - languageserver-0.2.5/languageserver/R/workspace.R | 119 ++++------ languageserver-0.2.5/languageserver/README.md | 4 languageserver-0.2.5/languageserver/inst |only languageserver-0.2.5/languageserver/man/run.Rd | 3 languageserver-0.2.5/languageserver/tests/testthat/test-stdio.R |only languageserver-0.2.5/languageserver/tests/testthat/test-tcp.R |only 18 files changed, 228 insertions(+), 166 deletions(-)
More information about languageserver at CRAN
Permanent link
Title: Statistical Toolbox for Radiometric Geochronology
Description: Plots U-Pb data on Wetherill and Tera-Wasserburg concordia diagrams. Calculates concordia and discordia ages. Performs linear regression of measurements with correlated errors using 'York', 'Titterington' and 'Ludwig' approaches. Generates Kernel Density Estimates (KDEs) and Cumulative Age Distributions (CADs). Produces Multidimensional Scaling (MDS) configurations and Shepard plots of multi-sample detrital datasets using the Kolmogorov-Smirnov distance as a dissimilarity measure. Calculates 40Ar/39Ar ages, isochrons, and age spectra. Computes weighted means accounting for overdispersion. Calculates U-Th-He (single grain and central) ages, logratio plots and ternary diagrams. Processes fission track data using the external detector method and LA-ICP-MS, calculates central ages and plots fission track and other data on radial (a.k.a. 'Galbraith') plots. Constructs total Pb-U, Pb-Pb, K-Ca, Re-Os, Sm-Nd, Lu-Hf, Rb-Sr and 230Th-U isochrons as well as 230Th-U evolution plots.
Author: Pieter Vermeesch [aut, cre]
Maintainer: Pieter Vermeesch <p.vermeesch@ucl.ac.uk>
Diff between IsoplotR versions 1.4 dated 2018-08-13 and 2.0 dated 2018-09-10
DESCRIPTION | 10 +-- MD5 | 80 ++++++++++++++++--------------- NAMESPACE | 16 ++++++ R/IsoplotR.R | 9 ++- R/KCa.R |only R/PD.R | 77 ++++++++++++++++++------------ R/PbPb.R | 15 +---- R/RbSr.R | 2 R/UPb.R | 9 ++- R/age.R | 120 +++++++++++++++++++++++++++++++++-------------- R/cad.R | 31 +++++++----- R/concordia.R | 6 +- R/constants.R | 37 +++++++++----- R/discordia.R | 18 +++---- R/documentation.R | 11 +++- R/io.R | 75 +++++++++++++++++++++-------- R/isochron.R | 131 +++++++++++++++++++++++++++++++-------------------- R/kde.R | 36 +++++++++----- R/ludwig.R | 20 +++++-- R/peakfit.R | 83 ++++++++++++-------------------- R/radialplot.R | 59 +++++++++++------------ R/toolbox.R | 19 ++++--- R/weightedmean.R | 62 ++++++++++++------------ R/york.R | 132 +++++++++++++++++++++++++++++++++++++++++++++++----- data/examples.rda |binary inst/CITATION | 4 - inst/KCa1.csv |only inst/KCa2.csv |only inst/constants.json | 3 - man/IsoplotR.Rd | 11 +++- man/age.Rd | 67 ++++++++++++++------------ man/cad.Rd | 27 ++++++---- man/concordia.Rd | 2 man/data2york.Rd |only man/examples.Rd | 11 +++- man/isochron.Rd | 67 +++++++++++++++----------- man/kde.Rd | 27 ++++++---- man/peakfit.Rd | 29 ++++++----- man/radialplot.Rd | 28 +++++++---- man/read.data.Rd | 22 ++++++-- man/settings.Rd | 37 +++++++++----- man/weightedmean.Rd | 28 +++++++---- man/york.Rd | 15 +++-- 43 files changed, 907 insertions(+), 529 deletions(-)
Title: Distance to Default
Description: Provides fast methods to work with Merton's distance to default
model introduced in Merton (1974) <doi:10.1111/j.1540-6261.1974.tb03058.x>.
The methods includes simulation and estimation of the parameters.
Author: Benjamin Christoffersen [cre, aut],
R-core [cph]
Maintainer: Benjamin Christoffersen <boennecd@gmail.com>
Diff between DtD versions 0.1.0 dated 2018-05-02 and 0.2.0 dated 2018-09-10
DESCRIPTION | 6 +-- MD5 | 35 +++++++++++-------- NAMESPACE | 3 + NEWS.md |only R/BS_fit.R | 69 ++++++++++++++++++++++++++++----------- R/RcppExports.R | 4 ++ R/logLike.R |only R/rolling.R |only inst/doc/Distance-to-default.pdf |binary man/BS_fit.Rd | 12 +++++- man/BS_fit_rolling.Rd |only man/get_underlying.Rd | 4 +- man/merton_ll.Rd |only src/Makevars | 3 - src/Makevars.win | 3 - src/RcppExports.cpp | 19 ++++++++++ src/bs.cpp | 4 +- src/bs.h | 2 - src/est_iterative.cpp | 44 ++++++++++++++++-------- src/mle.cpp | 20 +++++++---- tests/testthat/test_logLike.R |only tests/testthat/test_rolling.R |only 22 files changed, 163 insertions(+), 65 deletions(-)
Title: A Method to Download Department of Education College Scorecard
Data
Description: A method to download Department of Education College
Scorecard data using the public API
<https://collegescorecard.ed.gov/data/documentation/>. It is based on
the 'dplyr' model of piped commands to select and filter data in a
single chained function call. An API key from the U.S. Department of
Education is required.
Author: Benjamin Skinner [aut, cre] (<https://orcid.org/0000-0002-0337-7415>)
Maintainer: Benjamin Skinner <btskinner@virginia.edu>
Diff between rscorecard versions 0.8.0 dated 2018-08-26 and 0.9.0 dated 2018-09-10
rscorecard-0.8.0/rscorecard/build |only rscorecard-0.8.0/rscorecard/inst |only rscorecard-0.8.0/rscorecard/vignettes |only rscorecard-0.9.0/rscorecard/DESCRIPTION | 9 - rscorecard-0.9.0/rscorecard/MD5 | 30 ++---- rscorecard-0.9.0/rscorecard/NEWS.md | 75 +++++++++------ rscorecard-0.9.0/rscorecard/R/get.R | 2 rscorecard-0.9.0/rscorecard/R/init.R | 2 rscorecard-0.9.0/rscorecard/R/select.R | 31 ++++++ rscorecard-0.9.0/rscorecard/R/select_year.R | 15 ++- rscorecard-0.9.0/rscorecard/R/sysdata.rda |binary rscorecard-0.9.0/rscorecard/man/figures |only rscorecard-0.9.0/rscorecard/man/sc_year.Rd | 5 - rscorecard-0.9.0/rscorecard/tests/testthat/test-filter.R | 8 - rscorecard-0.9.0/rscorecard/tests/testthat/test-get.R | 39 ++++++- rscorecard-0.9.0/rscorecard/tests/testthat/test-select.R | 53 +++++++++- rscorecard-0.9.0/rscorecard/tests/testthat/test-year.R | 17 ++- 17 files changed, 208 insertions(+), 78 deletions(-)
Title: Penalized Ordinal Regression
Description: Fits ordinal regression models with elastic net penalty.
Supported model families include cumulative probability, stopping ratio,
continuation ratio, and adjacent category. These families are a subset of
vector glm's which belong to a model class we call the elementwise link
multinomial-ordinal (ELMO) class. Each family in this class links a vector
of covariates to a vector of class probabilities. Each of these families
has a parallel form, which is appropriate for ordinal response data, as
well as a nonparallel form that is appropriate for an unordered categorical
response, or as a more flexible model for ordinal data. The parallel model
has a single set of coefficients, whereas the nonparallel model has a set of
coefficients for each response category except the baseline category. It is
also possible to fit a model with both parallel and nonparallel terms, which
we call the semi-parallel model. The semi-parallel model has the flexibility
of the nonparallel model, but the elastic net penalty shrinks it toward the
parallel model. For details, refer to Wurm, Hanlon, and Rathouz (2017)
<arXiv:1706.05003>.
Author: Michael Wurm [aut, cre],
Paul Rathouz [aut],
Bret Hanlon [aut]
Maintainer: Michael Wurm <wurm@uwalumni.com>
Diff between ordinalNet versions 2.4 dated 2017-12-05 and 2.5 dated 2018-09-10
DESCRIPTION | 6 +-- LICENSE | 2 - MD5 | 30 +++++++-------- R/cdIn.R | 2 - R/cdOut.R | 17 ++++++++ R/mirlsNet.R | 21 +++++++--- R/misc.R | 19 +++++++++ R/ordinalNet.R | 37 ++++++++++++------ R/ordinalNetCV.R | 84 +++++++++++++++++++++++++----------------- R/ordinalNetTune.R | 73 ++++++++++++++++++++++++------------ man/ordinalNet.Rd | 29 +++++++++----- man/ordinalNetCV.Rd | 41 +++++++++++--------- man/ordinalNetTune.Rd | 19 ++++++--- man/plot.ordinalNetTune.Rd | 12 +++--- man/summary.ordinalNetCV.Rd | 2 - man/summary.ordinalNetTune.Rd | 4 +- 16 files changed, 258 insertions(+), 140 deletions(-)
Title: Choosing the Sample Strategy
Description: Intended to assist in the choice of the sampling strategy to implement in a survey. It compares five strategies having into account the information available in an auxiliary variable and two superpopulation models, called working and true models.
Author: Edgar Bueno <edgar.bueno@stat.su.se>
Maintainer: Edgar Bueno <edgar.bueno@stat.su.se>
Diff between optimStrat versions 1.0 dated 2018-08-17 and 1.1 dated 2018-09-10
optimStrat-1.0/optimStrat/R/optiallo.R |only optimStrat-1.0/optimStrat/R/optimStrat-internal.R |only optimStrat-1.0/optimStrat/man/optiallo.Rd |only optimStrat-1.1/optimStrat/DESCRIPTION | 10 optimStrat-1.1/optimStrat/MD5 | 35 - optimStrat-1.1/optimStrat/R/optimApp.R | 12 optimStrat-1.1/optimStrat/R/simulatey.R | 8 optimStrat-1.1/optimStrat/R/stratify.R | 8 optimStrat-1.1/optimStrat/R/stratvar.R | 96 +-- optimStrat-1.1/optimStrat/R/varpips.R |only optimStrat-1.1/optimStrat/R/varstsi.R |only optimStrat-1.1/optimStrat/inst/optimStrat/myapp/server.R | 361 ++++++++------- optimStrat-1.1/optimStrat/inst/optimStrat/myapp/ui.R | 164 +++--- optimStrat-1.1/optimStrat/man/absdif.Rd | 8 optimStrat-1.1/optimStrat/man/covp.Rd | 3 optimStrat-1.1/optimStrat/man/optimStrat-package.Rd | 4 optimStrat-1.1/optimStrat/man/simulatey.Rd | 37 + optimStrat-1.1/optimStrat/man/stratify.Rd | 13 optimStrat-1.1/optimStrat/man/stratvar.Rd | 46 + optimStrat-1.1/optimStrat/man/varp.Rd | 3 optimStrat-1.1/optimStrat/man/varpips.Rd |only optimStrat-1.1/optimStrat/man/varstsi.Rd |only 22 files changed, 430 insertions(+), 378 deletions(-)
Title: Comprehensive TIFF I/O with Full Support for 'ImageJ' TIFF Files
Description: General purpose TIFF file I/O for R users. Currently the only such
package with read and write support for TIFF files with floating point
(real-numbered) pixels, and the only package that can correctly import TIFF
files that were saved from 'ImageJ' and write TIFF files than can be
correctly read by 'ImageJ' <https://imagej.nih.gov/ij/>.
Also supports text image I/O.
Author: Rory Nolan [aut, cre] (<https://orcid.org/0000-0002-5239-4043>),
Kent Johnson [aut],
Simon Urbanek [ctb],
Sergi Padilla-Parra [ths] (<https://orcid.org/0000-0002-8010-9481>),
Jeroen Ooms [rev, ctb] (<https://orcid.org/0000-0002-4035-0289>),
Jon Clayden [rev] (<https://orcid.org/0000-0002-6608-0619>)
Maintainer: Rory Nolan <rorynoolan@gmail.com>
Diff between ijtiff versions 1.1.0 dated 2018-04-19 and 1.4.0 dated 2018-09-10
ijtiff-1.1.0/ijtiff/inst/doc/ijtiff.R |only ijtiff-1.1.0/ijtiff/inst/doc/ijtiff.Rmd |only ijtiff-1.1.0/ijtiff/inst/doc/ijtiff.html |only ijtiff-1.1.0/ijtiff/src/Makevars |only ijtiff-1.1.0/ijtiff/src/dims.cpp |only ijtiff-1.1.0/ijtiff/src/float.cpp |only ijtiff-1.1.0/ijtiff/vignettes/ijtiff.Rmd |only ijtiff-1.4.0/ijtiff/DESCRIPTION | 35 - ijtiff-1.4.0/ijtiff/MD5 | 86 +- ijtiff-1.4.0/ijtiff/NAMESPACE | 3 ijtiff-1.4.0/ijtiff/NEWS.md | 37 + ijtiff-1.4.0/ijtiff/R/RcppExports.R | 8 ijtiff-1.4.0/ijtiff/R/class_constructors.R | 25 ijtiff-1.4.0/ijtiff/R/graphics.R | 76 +- ijtiff-1.4.0/ijtiff/R/ijtiff.R | 38 - ijtiff-1.4.0/ijtiff/R/read.R | 116 ++- ijtiff-1.4.0/ijtiff/R/text_io.R | 75 +- ijtiff-1.4.0/ijtiff/R/utils.R | 294 +++++++++- ijtiff-1.4.0/ijtiff/R/write.R | 157 +++-- ijtiff-1.4.0/ijtiff/README.md |only ijtiff-1.4.0/ijtiff/build/vignette.rds |binary ijtiff-1.4.0/ijtiff/cleanup |only ijtiff-1.4.0/ijtiff/configure |only ijtiff-1.4.0/ijtiff/inst/doc/reading-and-writing-images.R |only ijtiff-1.4.0/ijtiff/inst/doc/reading-and-writing-images.Rmd |only ijtiff-1.4.0/ijtiff/inst/doc/reading-and-writing-images.html |only ijtiff-1.4.0/ijtiff/inst/doc/text-images.R |only ijtiff-1.4.0/ijtiff/inst/doc/text-images.Rmd |only ijtiff-1.4.0/ijtiff/inst/doc/text-images.html |only ijtiff-1.4.0/ijtiff/inst/doc/the-imagej-problem.R |only ijtiff-1.4.0/ijtiff/inst/doc/the-imagej-problem.Rmd |only ijtiff-1.4.0/ijtiff/inst/doc/the-imagej-problem.html |only ijtiff-1.4.0/ijtiff/inst/img/Rlogo-banana.tif |only ijtiff-1.4.0/ijtiff/inst/img/Rlogo-grey.tif |only ijtiff-1.4.0/ijtiff/inst/img/Rlogo-grey.txt |only ijtiff-1.4.0/ijtiff/man/as_EBImage.Rd |only ijtiff-1.4.0/ijtiff/man/display.Rd | 22 ijtiff-1.4.0/ijtiff/man/figures |only ijtiff-1.4.0/ijtiff/man/ijtiff.Rd | 17 ijtiff-1.4.0/ijtiff/man/ijtiff_img.Rd | 4 ijtiff-1.4.0/ijtiff/man/linescan-conversion.Rd |only ijtiff-1.4.0/ijtiff/man/read_tif.Rd | 4 ijtiff-1.4.0/ijtiff/man/text-image-io.Rd | 14 ijtiff-1.4.0/ijtiff/man/tiff_tag_data.Rd | 18 ijtiff-1.4.0/ijtiff/man/write_tif.Rd | 5 ijtiff-1.4.0/ijtiff/src/Makevars.in |only ijtiff-1.4.0/ijtiff/src/RcppExports.cpp | 30 - ijtiff-1.4.0/ijtiff/src/common.c | 4 ijtiff-1.4.0/ijtiff/src/utils.cpp |only ijtiff-1.4.0/ijtiff/tests/testthat/test-as_EBImage-examples.R |only ijtiff-1.4.0/ijtiff/tests/testthat/test-count_imgs-examples.R | 12 ijtiff-1.4.0/ijtiff/tests/testthat/test-linescan_to_stack-examples.R |only ijtiff-1.4.0/ijtiff/tests/testthat/test-read_tags-examples.R | 41 - ijtiff-1.4.0/ijtiff/tests/testthat/test_class_constructors.R | 11 ijtiff-1.4.0/ijtiff/tests/testthat/test_graphics.R | 24 ijtiff-1.4.0/ijtiff/tests/testthat/test_io.R | 214 +++++-- ijtiff-1.4.0/ijtiff/tests/testthat/test_utils.R | 15 ijtiff-1.4.0/ijtiff/vignettes/reading-and-writing-images.Rmd |only ijtiff-1.4.0/ijtiff/vignettes/text-images.Rmd |only ijtiff-1.4.0/ijtiff/vignettes/the-imagej-problem.Rmd |only 60 files changed, 1045 insertions(+), 340 deletions(-)
Title: Studio Ghibli Palette Generator
Description: Colour palettes inspired by Studio Ghibli films, ported to R for your enjoyment.
Author: Ewen Henderson [aut, cre]
Maintainer: Ewen Henderson <ewenhenderson@gmail.com>
Diff between ghibli versions 0.1.1 dated 2017-12-05 and 0.1.2 dated 2018-09-10
DESCRIPTION | 8 ++++---- MD5 | 18 +++++++++--------- NEWS | 7 ++++++- R/colours.R | 3 ++- build/vignette.rds |binary inst/doc/ghibli-guide.R | 17 +++++------------ inst/doc/ghibli-guide.Rmd | 26 ++++++-------------------- inst/doc/ghibli-guide.html | 33 ++++++++------------------------- man/ghibli_palette.Rd | 3 +-- vignettes/ghibli-guide.Rmd | 26 ++++++-------------------- 10 files changed, 47 insertions(+), 94 deletions(-)
Title: Penalty Learning
Description: Implementations of algorithms from
Learning Sparse Penalties for Change-point Detection
using Max Margin Interval Regression, by
Hocking, Rigaill, Vert, Bach
<http://proceedings.mlr.press/v28/hocking13.html>
published in proceedings of ICML2013.
Author: Toby Dylan Hocking
Maintainer: Toby Dylan Hocking <toby.hocking@r-project.org>
Diff between penaltyLearning versions 2017.12.08 dated 2017-12-08 and 2018.09.04 dated 2018-09-10
penaltyLearning-2017.12.08/penaltyLearning/tests/testthat/R |only penaltyLearning-2018.09.04/penaltyLearning/DESCRIPTION | 8 ++++---- penaltyLearning-2018.09.04/penaltyLearning/MD5 | 7 +++---- penaltyLearning-2018.09.04/penaltyLearning/NEWS | 4 ++++ penaltyLearning-2018.09.04/penaltyLearning/R/IntervalRegression.R | 4 ++-- 5 files changed, 13 insertions(+), 10 deletions(-)
More information about penaltyLearning at CRAN
Permanent link
Title: Non Linear Time Series Analysis
Description: Models for time series forecasting and causality detection. The main functionalities of this package consist of a neural network Vector Auto-Regressive model, the classical causality test C.W.J.Granger (1980) <doi:10.1016/0165-1889(80)90069-X>, and a non-linear version of it based on feed-forward neural networks.
Author: Youssef Hmamouche [aut, cre],
Sylvain Barthelemy [cph]
Maintainer: Youssef Hmamouche <hmamoucheyussef@gmail.com>
Diff between NlinTS versions 1.3.4 dated 2018-07-22 and 1.3.5 dated 2018-09-10
DESCRIPTION | 10 +++--- MD5 | 30 +++++++++---------- R/modues.R | 59 +++++++++++++++++++-------------------- build/partial.rdb |binary inst/include/CDynamicCausality.h | 24 ++++++++++++++- inst/include/CNeuralNVarModel.h | 13 +++++++- inst/include/CVARMLPExport.h | 6 +-- inst/include/CausalityTest.h | 28 +++++++++++++++--- inst/include/Operateurs.h | 33 +++++++++++++++++---- man/causality.test.Rd | 14 +++++---- man/df.test.Rd | 8 ++--- man/nlin_causality.test.Rd | 23 +++++++-------- man/varmlp.Rd | 14 ++++----- src/CausalityTest.cpp | 26 +++++++++++++---- src/Cmatrixoperations.cpp | 21 ++++--------- src/Tests.cpp | 15 ++++----- 16 files changed, 201 insertions(+), 123 deletions(-)
Title: DBI Connector to Presto
Description: Implements a 'DBI' compliant interface to Presto. Presto is
an open source distributed SQL query engine for running interactive
analytic queries against data sources of all sizes ranging from
gigabytes to petabytes: <https://prestodb.io/>.
Author: Onur Ismail Filiz [aut, cre],
Sergey Goder [aut],
John Myles White [ctb]
Maintainer: Onur Ismail Filiz <onur@fb.com>
Diff between RPresto versions 1.3.0 dated 2017-07-13 and 1.3.1 dated 2018-09-10
RPresto-1.3.0/RPresto/tests/testthat/test-wait.R |only RPresto-1.3.1/RPresto/DESCRIPTION | 22 RPresto-1.3.1/RPresto/MD5 | 56 +- RPresto-1.3.1/RPresto/NEWS.md | 8 RPresto-1.3.1/RPresto/R/PrestoCursor.R | 34 + RPresto-1.3.1/RPresto/R/PrestoResult.R | 17 RPresto-1.3.1/RPresto/R/RcppExports.R | 4 RPresto-1.3.1/RPresto/R/dbDataType.R | 4 RPresto-1.3.1/RPresto/R/dbFetch.R | 59 -- RPresto-1.3.1/RPresto/R/dbListFields.R | 18 RPresto-1.3.1/RPresto/R/dbSendQuery.R | 8 RPresto-1.3.1/RPresto/R/db_query_fields.R | 9 RPresto-1.3.1/RPresto/R/extract.data.R | 3 RPresto-1.3.1/RPresto/R/json.tabular.to.data.frame.R | 14 RPresto-1.3.1/RPresto/R/parse.response.R |only RPresto-1.3.1/RPresto/R/src.translate.env.src.presto.R | 5 RPresto-1.3.1/RPresto/man/PrestoResult-class.Rd | 7 RPresto-1.3.1/RPresto/man/dplyr_function_implementations.Rd | 2 RPresto-1.3.1/RPresto/src/RcppExports.cpp | 8 RPresto-1.3.1/RPresto/tests/testthat/test-PrestoCursor.R | 42 + RPresto-1.3.1/RPresto/tests/testthat/test-data_types.R | 6 RPresto-1.3.1/RPresto/tests/testthat/test-dbGetQuery.R | 99 ++++ RPresto-1.3.1/RPresto/tests/testthat/test-dbIsValid.R | 8 RPresto-1.3.1/RPresto/tests/testthat/test-dbListFields.R | 229 +++++++++- RPresto-1.3.1/RPresto/tests/testthat/test-dbSendQuery.R | 54 ++ RPresto-1.3.1/RPresto/tests/testthat/test-db_query_fields.R | 14 RPresto-1.3.1/RPresto/tests/testthat/test-dplyr.integration.R | 4 RPresto-1.3.1/RPresto/tests/testthat/test-fetch.R | 76 +++ RPresto-1.3.1/RPresto/tests/testthat/test-json_tabular_to_data_frame.R | 73 ++- RPresto-1.3.1/RPresto/tests/testthat/test-src_translate_env.R | 48 +- 30 files changed, 743 insertions(+), 188 deletions(-)
Title: PRIM Survival Regression Classification
Description: Performs a unified treatment of Bump Hunting by Patient Rule Induction Method (PRIM) in Survival, Regression and Classification settings (SRC). The current version is a development release that only implements the case of a survival response.
Author: Jean-Eudes Dazard [aut, cre],
Michael Choe [ctb],
Michael LeBlanc [ctb],
Alberto Santana [ctb],
J. Sunil Rao [ctb]
Maintainer: Jean-Eudes Dazard <jean-eudes.dazard@case.edu>
Diff between PRIMsrc versions 0.8.0 dated 2018-08-25 and 0.8.1 dated 2018-09-10
PRIMsrc-0.8.0/PRIMsrc/inst/doc/PRIMsrc_0.8.0.pdf |only PRIMsrc-0.8.1/PRIMsrc/DESCRIPTION | 8 ++-- PRIMsrc-0.8.1/PRIMsrc/MD5 | 16 ++++----- PRIMsrc-0.8.1/PRIMsrc/R/PRIMsrc.internal.r | 7 ++-- PRIMsrc-0.8.1/PRIMsrc/R/PRIMsrc.r | 13 ++++---- PRIMsrc-0.8.1/PRIMsrc/README.md | 14 ++++---- PRIMsrc-0.8.1/PRIMsrc/inst/NEWS | 23 +++++++++++--- PRIMsrc-0.8.1/PRIMsrc/inst/doc/PRIMsrc_0.8.1.pdf |only PRIMsrc-0.8.1/PRIMsrc/man/plot.sbh.Rd | 10 ++++-- PRIMsrc-0.8.1/PRIMsrc/man/sbh.Rd | 37 +++++++++++++---------- 10 files changed, 78 insertions(+), 50 deletions(-)
Title: Mean-Variance Regularization
Description: This is a non-parametric method for joint adaptive mean-variance regularization and variance stabilization of high-dimensional data. It is suited for handling difficult problems posed by high-dimensional multivariate datasets (p >> n paradigm). Among those are that the variance is often a function of the mean, variable-specific estimators of variances are not reliable, and tests statistics have low powers due to a lack of degrees of freedom. Key features include:
(i) Normalization and/or variance stabilization of the data,
(ii) Computation of mean-variance-regularized t-statistics (F-statistics to follow),
(iii) Generation of diverse diagnostic plots,
(iv) Computationally efficient implementation using C/C++ interfacing and an option for parallel computing to enjoy a faster and easier experience in the R environment.
Author: Jean-Eudes Dazard [aut, cre],
Hua Xu [ctb],
Alberto Santana [ctb]
Maintainer: Jean-Eudes Dazard <jean-eudes.dazard@case.edu>
Diff between MVR versions 1.32.1 dated 2018-04-16 and 1.33.0 dated 2018-09-10
MVR-1.32.1/MVR/inst/doc/MVR_1.32.1.pdf |only MVR-1.33.0/MVR/DESCRIPTION | 8 +++--- MVR-1.33.0/MVR/MD5 | 16 ++++++------ MVR-1.33.0/MVR/R/MVRr.internal.r | 6 ++-- MVR-1.33.0/MVR/R/MVRr.r | 14 +++++----- MVR-1.33.0/MVR/README.md | 10 +++---- MVR-1.33.0/MVR/inst/NEWS | 12 +++++++++ MVR-1.33.0/MVR/inst/doc/MVR_1.33.0.pdf |only MVR-1.33.0/MVR/man/mvr.Rd | 43 ++++++++++++++++++--------------- MVR-1.33.0/MVR/man/mvrt.test.Rd | 13 +++++---- 10 files changed, 70 insertions(+), 52 deletions(-)
Title: Time Series Analysis Using the Innovations Algorithm
Description: Provides functions for modeling and forecasting time series data. Forecasting is based on the innovations algorithm. A description of the innovations algorithm can be found in the textbook "Introduction to Time Series and Forecasting" by Peter J. Brockwell and Richard A. Davis. <http://www.springer.com/us/book/9781475777505>.
Author: George Weigt
Maintainer: George Weigt <g808391@icloud.com>
Diff between itsmr versions 1.8 dated 2018-01-21 and 1.9 dated 2018-09-10
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/itsmr.R | 4 ++-- man/itsmr-package.Rd | 4 ++-- 4 files changed, 11 insertions(+), 11 deletions(-)
Title: Install Packages from Snapshots on the Checkpoint Server for
Reproducibility
Description: The goal of checkpoint is to solve the problem of package
reproducibility in R. Specifically, checkpoint allows you to install packages
as they existed on CRAN on a specific snapshot date as if you had a CRAN time
machine. To achieve reproducibility, the checkpoint() function installs the
packages required or called by your project and scripts to a local library
exactly as they existed at the specified point in time. Only those packages
are available to your project, thereby avoiding any package updates that came
later and may have altered your results. In this way, anyone using checkpoint's
checkpoint() can ensure the reproducibility of your scripts or projects at any
time. To create the snapshot archives, once a day (at midnight UTC) Microsoft
refreshes the Austria CRAN mirror on the "Microsoft R Archived Network"
server (<https://mran.microsoft.com/>). Immediately after completion
of the rsync mirror process, the process takes a snapshot, thus creating the
archive. Snapshot archives exist starting from 2014-09-17.
Author: Microsoft Corporation
Maintainer: Rich Calaway <richcala@microsoft.com>
Diff between checkpoint versions 0.4.3 dated 2017-12-18 and 0.4.5 dated 2018-09-10
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- build/vignette.rds |binary inst/doc/checkpoint.html | 16 ++++++++-------- inst/doc/managing-checkpoint-archives.html | 26 +++++++++++++------------- tests/testthat/test-0-is-404.R | 1 + 6 files changed, 31 insertions(+), 30 deletions(-)
Title: Wrap R Tools for Debugging and Parametric Programming
Description: Tools for writing and debugging R code. Provides:
'let()'
(converts non-standard evaluation interfaces to parametric standard
evaluation interfaces, inspired by 'gtools:strmacro()' and 'base::bquote()'),
'%.>%' dot-pipe (an 'S3' configurable pipe),
'build_frame()'/'draw_frame()' ('data.frame' example tools),
'qc()' (quoting concatenate),
':=' (named map builder),
'DebugFnW()' (capture function context on error for debugging),
and more.
Author: John Mount [aut, cre],
Nina Zumel [aut],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between wrapr versions 1.6.1 dated 2018-08-22 and 1.6.2 dated 2018-09-10
DESCRIPTION | 12 ++-- MD5 | 42 +++++++++------ NAMESPACE | 5 + NEWS.md | 7 ++ R/let.R | 106 ++++++++++++++++++++++++++++++---------- R/mk_formula.R |only R/orderv.R |only README.md | 2 inst/doc/CornerCases.html | 4 - inst/doc/DebugFnW.html | 6 +- inst/doc/FrameTools.html | 4 - inst/doc/Named_Arguments.html | 4 - inst/doc/SubstitutionModes.html | 4 - inst/doc/dot_pipe.html | 4 - inst/doc/lambda.html | 4 - inst/doc/let.Rmd | 7 +- inst/doc/let.html | 7 +- inst/doc/named_map_builder.html | 4 - inst/doc/wrapr_applicable.html | 4 - man/grapes-in_block-grapes.Rd |only man/let.Rd | 53 ++++++++++---------- man/mk_formula.Rd |only man/orderv.Rd |only man/sortv.Rd |only vignettes/let.Rmd | 7 +- 25 files changed, 183 insertions(+), 103 deletions(-)
Title: Tools for the Analysis of Air Pollution Data
Description: Tools to analyse, interpret and understand air
pollution data. Data are typically hourly time series
and both monitoring data and dispersion model output
can be analysed. Many functions can also be applied to
other data, including meteorological and traffic data.
Author: David Carslaw [aut, cre],
Karl Ropkins [aut]
Maintainer: David Carslaw <david.carslaw@york.ac.uk>
Diff between openair versions 2.4-2 dated 2018-05-22 and 2.5-0 dated 2018-09-10
DESCRIPTION | 11 ++--- MD5 | 94 ++++++++++++++++++++++----------------------- NAMESPACE | 2 R/TheilSen.R | 4 + R/aqStats.R | 2 R/calcPercentile.R | 2 R/cutData.R | 7 ++- R/importAURN.R | 16 +++++++ R/polarAnnulus.R | 2 R/polarFreq.R | 10 +++- R/smoothTrend.R | 5 +- R/timeAverage.R | 8 +-- R/timePlot.R | 2 R/timeVariation.R | 14 +++--- R/trajCluster.R | 18 +++++++- R/trajLevel.R | 10 ++-- R/trajPlot.R | 14 +++--- R/utilities.R | 2 R/zzz.R | 3 - man/TaylorDiagram.Rd | 4 - man/TheilSen.Rd | 19 ++++----- man/aqStats.Rd | 4 - man/calendarPlot.Rd | 12 +++-- man/conditionalEval.Rd | 9 ++-- man/conditionalQuantile.Rd | 7 +-- man/import.Rd | 6 +- man/importADMS.Rd | 8 +-- man/importAURN.Rd | 4 - man/importAURNCsv.Rd | 5 +- man/importKCL.Rd | 4 - man/linearRelation.Rd | 4 - man/modStats.Rd | 4 - man/percentileRose.Rd | 13 +++--- man/polarFreq.Rd | 11 +++-- man/polarPlot.Rd | 5 +- man/rollingMean.Rd | 4 - man/scatterPlot.Rd | 20 +++++---- man/selectByDate.Rd | 4 - man/selectRunning.Rd | 3 - man/smoothTrend.Rd | 10 ++-- man/summaryPlot.Rd | 4 - man/timeAverage.Rd | 7 +-- man/timeProp.Rd | 6 +- man/timeVariation.Rd | 5 +- man/trajCluster.Rd | 8 +-- man/trajLevel.Rd | 9 ++-- man/trajPlot.Rd | 4 - man/trendLevel.Rd | 3 - 48 files changed, 248 insertions(+), 184 deletions(-)
Title: Visualization and Analysis of Statistical Measures of Confidence
Description: Enables: (1) plotting two-dimensional confidence regions, and (2) calculating
confidence intervals and the associated actual coverage for binomial proportions. Both
are given in greater detail next. (1) Plots the two-dimensional confidence region for
probability distribution parameters (supported distribution suffixes: gamma, invgauss,
llogis, lnorm, norm, unif, weibull) corresponding to a user given dataset and level of
significance. The crplot() algorithm plots more points in areas of greater curvature to
ensure a smooth appearance throughout the confidence region boundary. An alternative
heuristic plots a specified number of points at roughly uniform intervals along its
boundary. Both heuristics build upon the radial profile log-likelihood ratio technique
for plotting two-dimensional confidence regions given by Jaeger (2016)
<doi:10.1080/00031305.2016.1182946>. (2) Calculates confidence interval bounds for a
binomial proportion with binomTest(), calculates the actual coverage with
binomTestCoverage(), and plots the actual coverage with binomTestCoveragePlot(). Calculates
confidence interval bounds for the binomial proportion using an ensemble of constituent
confidence intervals with binomTestEnsemble().
Author: Christopher Weld [aut, cre] (<https://orcid.org/0000-0001-5902-9738>),
Hayeon Park [aut],
Lawrence Leemis [aut],
Andrew Loh [ctb],
Yuan Chang [ctb],
Brock Crook [ctb],
Xin Zhang [ctb]
Maintainer: Christopher Weld <ceweld@email.wm.edu>
Diff between conf versions 1.3.1 dated 2018-07-23 and 1.3.2 dated 2018-09-10
DESCRIPTION | 6 +-- MD5 | 18 ++++++--- R/coversim.R | 89 ++++++++++++++++++++++++++++++++++--------------- R/crplot.R | 37 +++++++++++++------- build/vignette.rds |binary inst/doc/coversim.R |only inst/doc/coversim.Rmd |only inst/doc/coversim.html |only inst/doc/crplot.html | 6 +-- man/coversim.Rd | 6 +-- man/crplot.Rd | 6 +-- vignettes/coversim.Rmd |only 12 files changed, 110 insertions(+), 58 deletions(-)
Title: Retrieve Historical and Near Realtime Data from CDEC
Description: CDEC maintains a set of web services at <http://cdec.water.ca.gov/queryTools.html>.
In order to better interact and analyze the data this R packages allows
users to quickly and easily retrieve data.
Author: Emanuel Rodriguez [aut, cre]
Maintainer: Emanuel Rodriguez <erodriguez@flowwest.com>
Diff between CDECRetrieve versions 0.1.1 dated 2018-05-15 and 0.1.2 dated 2018-09-10
DESCRIPTION | 8 MD5 | 30 - NEWS.md | 6 R/consts.R | 2 R/data.R | 3 R/datasets.R | 7 R/query.R | 99 +++-- build/vignette.rds |binary data/sac_valley_wy_types.rda |binary data/san_joaquin_wy_types.rda |binary inst/doc/CDECRetrieve.html | 523 ++++++++--------------------- inst/doc/Introduction_to_CDECRetrieve.html | 188 ---------- inst/doc/advanced-queries.R |only inst/doc/advanced-queries.Rmd |only inst/doc/advanced-queries.html |only man/cdec_query.Rd | 2 man/cdec_stations.Rd | 4 vignettes/advanced-queries.Rmd |only 18 files changed, 245 insertions(+), 627 deletions(-)
Title: A Framework for Comparing the Performance of MCMC Samplers
Description: A framework for running sets of MCMC samplers on sets of distributions with a variety of tuning parameters, along with plotting functions to visualize the results of those simulations.
Author: Madeleine Thompson, except dchud.f and dchdd.f, which were written by G. W. Stewart.
Maintainer: Madeleine Thompson <madeleineth@gmail.com>
Diff between SamplerCompare versions 1.2.9 dated 2018-01-24 and 1.3.0 dated 2018-09-10
SamplerCompare-1.2.9/SamplerCompare/man/SamplerCompare-package.Rd |only SamplerCompare-1.3.0/SamplerCompare/DESCRIPTION | 21 SamplerCompare-1.3.0/SamplerCompare/MD5 | 38 - SamplerCompare-1.3.0/SamplerCompare/NAMESPACE | 7 SamplerCompare-1.3.0/SamplerCompare/R/compare-samplers.R | 225 +++------- SamplerCompare-1.3.0/SamplerCompare/R/util.R | 14 SamplerCompare-1.3.0/SamplerCompare/build/vignette.rds |binary SamplerCompare-1.3.0/SamplerCompare/inst/doc/glue.pdf |binary SamplerCompare-1.3.0/SamplerCompare/inst/doc/sc-intro.R | 2 SamplerCompare-1.3.0/SamplerCompare/inst/doc/sc-intro.Rnw | 13 SamplerCompare-1.3.0/SamplerCompare/inst/doc/sc-intro.pdf |binary SamplerCompare-1.3.0/SamplerCompare/man/compare.samplers.Rd | 26 - SamplerCompare-1.3.0/SamplerCompare/tests/test-lint.R |only SamplerCompare-1.3.0/SamplerCompare/tests/test-samplers.R | 35 - SamplerCompare-1.3.0/SamplerCompare/vignettes/Code/ex-beta.Rfrag | 7 SamplerCompare-1.3.0/SamplerCompare/vignettes/Code/ex-compare-results.Rfrag | 13 SamplerCompare-1.3.0/SamplerCompare/vignettes/Code/ex-compare-samplers.Rfrag | 15 SamplerCompare-1.3.0/SamplerCompare/vignettes/Code/ex-final-compare.Rfrag | 15 SamplerCompare-1.3.0/SamplerCompare/vignettes/Code/ex-final.Rfrag | 2 SamplerCompare-1.3.0/SamplerCompare/vignettes/Code/ex-metropolis.Rfrag | 8 SamplerCompare-1.3.0/SamplerCompare/vignettes/sc-intro.Rnw | 13 21 files changed, 158 insertions(+), 296 deletions(-)
More information about SamplerCompare at CRAN
Permanent link
Title: Relational Query Generator for Data Manipulation at Scale
Description: A piped query generator based on Edgar F. Codd's relational
algebra, and on production experience using 'SQL' and 'dplyr' at big data
scale. The design represents an attempt to make 'SQL' more teachable by
denoting composition by a sequential pipeline notation instead of nested
queries or functions. The implementation delivers reliable high
performance data processing on large data systems such as 'Spark',
databases, and 'data.table'. Package features include: data processing trees
or pipelines as observable objects (able to report both columns
produced and columns used), optimized 'SQL' generation as an explicit
user visible modeling step, explicit query reasoning and checking.
Author: John Mount [aut, cre],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between rquery versions 0.6.2 dated 2018-08-15 and 1.0.0 dated 2018-09-10
DESCRIPTION | 10 +++++----- MD5 | 28 +++++++++++++++------------- NAMESPACE | 1 + NEWS.md | 7 +++++++ R/db_info.R | 6 ++++-- R/extend.R | 9 +++++++++ R/join_controller.R | 2 +- R/project.R | 3 +++ R/tokenize_for_sql.R | 2 +- inst/doc/AssigmentPartitioner.html | 4 ++-- inst/doc/PipeableSQL.html | 4 ++-- inst/doc/QueryGeneration.html | 4 ++-- inst/doc/rquery_intro.html | 4 ++-- man/quote_table_name.Rd | 2 +- man/rquery_default_db_info.Rd |only tests/testthat/test_partial_fn_parse.R |only 16 files changed, 55 insertions(+), 31 deletions(-)
Title: Miscellaneous Functions for the USGS INL Project Office
Description: A collection of functions for creating high-level graphics,
performing raster-based analysis, processing MODFLOW-based models,
selecting subsets using a genetic algorithm, creating interactive web maps,
etc. Used to support packages and scripts written by researchers at the
United States Geological Survey (USGS) Idaho National Laboratory (INL)
Project Office.
Author: Jason C. Fisher [aut, cre] (<https://orcid.org/0000-0001-9032-8912>)
Maintainer: Jason C. Fisher <jfisher@usgs.gov>
Diff between inlmisc versions 0.4.2 dated 2018-07-14 and 0.4.3 dated 2018-09-10
DESCRIPTION | 12 MD5 | 88 +++--- NAMESPACE | 3 NEWS.md | 30 ++ R/AddColorKey.R | 4 R/AddGradientLegend.R | 49 +-- R/AddInsetMap.R | 29 -- R/AddNorthArrow.R |only R/AddPoints.R | 82 +++--- R/AddScaleBar.R | 91 +++---- R/BumpDisconnectCells.R | 41 ++- R/ExportRasterStack.R | 30 +- R/ExtractAlongTransect.R | 7 R/FindOptimalSubset.R | 13 - R/GetInsetLocation.R |only R/GetTolColors.R | 570 ++++++++++++++++++++++++++++++++++++-------- R/Grid2Polygons.R | 17 + R/PlotCrossSection.R | 35 +- R/PlotGraph.R | 76 +++-- R/PlotMap.R | 98 ++----- R/PrintFigure.R | 12 R/RecreateLibrary.R | 2 R/RmSmallCellChunks.R | 6 man/AddColorKey.Rd | 2 man/AddGradientLegend.Rd | 29 +- man/AddInsetMap.Rd | 14 - man/AddNorthArrow.Rd |only man/AddPoints.Rd | 47 ++- man/AddScaleBar.Rd | 30 +- man/AddWebMapElements.Rd | 8 man/BumpDisconnectCells.Rd | 35 +- man/ExportRasterStack.Rd | 26 +- man/ExtractAlongTransect.Rd | 7 man/FindOptimalSubset.Rd | 17 - man/GetInsetLocation.Rd |only man/GetTolColors.Rd | 199 +++++++++++++-- man/Grid2Polygons.Rd | 20 + man/IsPackageInstalled.Rd | 2 man/PlotCrossSection.Rd | 32 +- man/PlotGraph.Rd | 22 + man/PlotMap.Rd | 40 +-- man/PrintFigure.Rd | 5 man/ReadModflowBinary.Rd | 4 man/RecreateLibrary.Rd | 3 man/RmSmallCellChunks.Rd | 4 man/ToScientific.Rd | 4 tests/testthat/test.R | 12 47 files changed, 1242 insertions(+), 615 deletions(-)
Title: Bayesian Multi-Plate High-Throughput Screening of Compounds
Description: Can be used for joint identification of candidate compound hits from multiple assays, in drug discovery. This package implements the framework of I. D. Shterev, D. B. Dunson, C. Chan and G. D. Sempowski. "Bayesian Multi-Plate High-Throughput Screening of Compounds", Scientific Reports 8(1):9551, 2018. This project was funded by the Division of Allergy, Immunology, and Transplantation, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services, under contract No. HHSN272201400054C entitled "Adjuvant Discovery For Vaccines Against West Nile Virus and Influenza", awarded to Duke University and lead by Drs. Herman Staats and Soman Abraham.
Author: Ivo D. Shterev [aut, cre],
David B. Dunson [aut],
Cliburn Chan [aut],
Gregory D. Sempowski [aut]
Maintainer: Ivo D. Shterev <i.shterev@duke.edu>
Diff between BHTSpack versions 0.4 dated 2018-06-22 and 0.5 dated 2018-09-10
DESCRIPTION | 8 ++++---- MD5 | 30 +++++++++++++++--------------- NAMESPACE | 1 + R/bhts.R | 5 ++++- R/r.fdr.R | 2 +- build/partial.rdb |binary inst/doc/BHTSpackManual.Rnw | 1 + inst/doc/BHTSpackManual.pdf |binary man/BHTSpack-package.Rd | 2 +- man/bhts.Rd | 6 +++++- man/h.pr.u.Rd | 4 ---- man/ind.u.Rd | 4 ---- man/lambda.u.Rd | 4 ---- man/sig.k.u.Rd | 4 ---- man/z.pr.u.Rd | 4 ---- vignettes/BHTSpackManual.Rnw | 1 + 16 files changed, 33 insertions(+), 43 deletions(-)
Title: Analysis of Basketball Data
Description: Collection of tools to work with basketball data. Functions available are related to friendly
web scraping and visualization. Data were obtained from <http://www.euroleague.net/>,
<http://www.eurocupbasketball.com/> and <http://www.acb.com>, following the instructions of their
respectives robots.txt files. Tools for visualization include a population pyramid, 2D plots of
archetypoids and the rest of players, percentile circular plots, plots to analyze monthly evolution,
heatmaps, shooting barplots, four factor plots and maps of players' nationalities.
Author: Guillermo Vinue
Maintainer: Guillermo Vinue <Guillermo.Vinue@uv.es>
Diff between BAwiR versions 1.1.1 dated 2018-07-10 and 1.1.2 dated 2018-09-10
DESCRIPTION | 10 ++++++---- MD5 | 13 +++++++++---- NEWS | 4 ++++ R/get_stats_seasons.R | 10 ++++++++-- build |only inst |only man/BAwiR-package.Rd | 4 ++-- vignettes |only 8 files changed, 29 insertions(+), 12 deletions(-)
Title: A Statistically Sound 'data.frame' Processor/Conditioner
Description: A 'data.frame' processor/conditioner that prepares real-world data for predictive modeling in a statistically sound manner.
'vtreat' prepares variables so that data has fewer exceptional cases, making
it easier to safely use models in production. Common problems 'vtreat' defends
against: 'Inf', 'NA', too many categorical levels, rare categorical levels, and new
categorical levels (levels seen during application, but not during training). Reference:
"'vtreat': a data.frame Processor for Predictive Modeling", 'Zumel', 'Mount', 2016, DOI:10.5281/zenodo.1173314.
Author: John Mount [aut, cre],
Nina Zumel [aut],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between vtreat versions 1.3.0 dated 2018-07-20 and 1.3.1 dated 2018-09-10
DESCRIPTION | 17 - MD5 | 72 +++--- NEWS.md | 9 R/mult_class.R | 16 - R/rquery_treatment.R | 93 +++++++- R/zzz.R | 2 README.md | 12 - inst/doc/MultiClassVtreat.R | 10 inst/doc/MultiClassVtreat.Rmd | 12 - inst/doc/MultiClassVtreat.html | 347 +++++++++++++++++++++++-------- inst/doc/SavingTreamentPlans.html | 4 inst/doc/vtreat.html | 54 ++-- inst/doc/vtreatCrossFrames.R | 6 inst/doc/vtreatCrossFrames.Rmd | 6 inst/doc/vtreatCrossFrames.html | 161 +++++++++++--- inst/doc/vtreatGrouping.html | 4 inst/doc/vtreatOverfit.html | 38 +-- inst/doc/vtreatRareLevels.html | 4 inst/doc/vtreatScaleMode.html | 16 - inst/doc/vtreatSignificance.html | 18 - inst/doc/vtreatSplitting.html | 4 inst/doc/vtreatVariableTypes.html | 42 +-- man/as_rquery_plan.Rd | 3 man/buildEvalSets.Rd | 4 man/designTreatmentsN.Rd | 4 man/flatten_fn_list.Rd | 1 man/mkCrossFrameMExperiment.Rd | 16 - man/mkCrossFrameNExperiment.Rd | 6 man/prepare.multinomial_plan.Rd | 5 man/prepare.treatmentplan.Rd | 9 man/reexports.Rd | 12 - man/rqdatatable_prepare.Rd | 9 man/rquery_prepare.Rd | 12 - tests/testthat/test_custom_coder.R |only tests/testthat/test_multiclass.R |only tests/testthat/test_rquery.R |only tests/testthat/test_simple_missingness.R |only vignettes/MultiClassVtreat.Rmd | 12 - vignettes/vtreatCrossFrames.Rmd | 6 39 files changed, 714 insertions(+), 332 deletions(-)
Title: Generation of Virtual Species Distributions
Description: Provides a framework for generating virtual species distributions,
a procedure increasingly used in ecology to improve species distribution
models. This package integrates the existing methodological approaches with the
objective of generating virtual species distributions with increased ecological
realism.
Author: Boris Leroy [cre, aut], Christine N. Meynard [ctb], Celine Bellard [ctb], Franck Courchamp [ctb], Robin Delsol [ctb], Willson Gaul [ctb]
Maintainer: Boris Leroy <leroy.boris@gmail.com>
Diff between virtualspecies versions 1.4-2 dated 2017-07-03 and 1.4-4 dated 2018-09-10
DESCRIPTION | 14 - MD5 | 57 ++-- NAMESPACE | 2 NEWS | 9 R/convertToPA.R | 2 R/formatFunctions.R | 2 R/generateRandomSp.R | 64 +++-- R/generateSpFromBCA.R | 10 R/generateSpFromFun.R | 10 R/generateSpFromPCA.R | 10 R/genericfunctions.R | 53 ++++ R/limitDistribution.R | 2 R/plotResponse.R | 2 R/removeCollinearity.R | 8 R/sampleOccurrences.R | 507 +++++++++++++++++++++++++++--------------- R/sp.env.functions.R | 46 +-- R/utilityFunctions.R |only R/virtualspecies-package.R | 7 man/betaFun.Rd | 2 man/convertToPA.Rd | 6 man/formatFunctions.Rd | 2 man/generateRandomSp.Rd | 19 - man/generateSpFromBCA.Rd | 15 - man/generateSpFromFun.Rd | 14 - man/generateSpFromPCA.Rd | 8 man/limitDistribution.Rd | 2 man/plotResponse.Rd | 2 man/removeCollinearity.Rd | 8 man/sampleOccurrences.Rd | 195 +++++++++++----- man/virtualspecies-package.Rd | 7 30 files changed, 711 insertions(+), 374 deletions(-)
More information about virtualspecies at CRAN
Permanent link
Title: Discrete-Event Simulation for R
Description: A process-oriented and trajectory-based Discrete-Event Simulation
(DES) package for R. It is designed as a generic yet powerful framework. The
architecture encloses a robust and fast simulation core written in 'C++' with
automatic monitoring capabilities. It provides a rich and flexible R API that
revolves around the concept of trajectory, a common path in the simulation
model for entities of the same type.
Author: Iñaki Ucar [aut, cph, cre] (<https://orcid.org/0000-0001-6403-5550>),
Bart Smeets [aut, cph]
Maintainer: Iñaki Ucar <iucar@fedoraproject.org>
Diff between simmer versions 4.0.0 dated 2018-07-20 and 4.0.1 dated 2018-09-10
simmer-4.0.0/simmer/man/at.Rd |only simmer-4.0.1/simmer/DESCRIPTION | 12 simmer-4.0.1/simmer/MD5 | 109 simmer-4.0.1/simmer/NAMESPACE | 11 simmer-4.0.1/simmer/NEWS.md | 21 simmer-4.0.1/simmer/R/RcppExports.R | 4 simmer-4.0.1/simmer/R/generators.R | 92 simmer-4.0.1/simmer/R/schedule-class.R | 10 simmer-4.0.1/simmer/R/simmer-class.R | 7 simmer-4.0.1/simmer/R/simmer-methods.R | 81 simmer-4.0.1/simmer/R/trajectory-activities.R | 84 simmer-4.0.1/simmer/R/trajectory-class.R | 35 simmer-4.0.1/simmer/R/utils.R | 6 simmer-4.0.1/simmer/R/wrap-class.R | 4 simmer-4.0.1/simmer/R/wrap-methods.R | 27 simmer-4.0.1/simmer/inst/doc/simmer-01-introduction.html | 530 +- simmer-4.0.1/simmer/inst/doc/simmer-02-jss.R | 5 simmer-4.0.1/simmer/inst/doc/simmer-02-jss.Rmd | 41 simmer-4.0.1/simmer/inst/doc/simmer-02-jss.pdf |binary simmer-4.0.1/simmer/inst/doc/simmer-03-trajectories.R | 2 simmer-4.0.1/simmer/inst/doc/simmer-03-trajectories.Rmd | 12 simmer-4.0.1/simmer/inst/doc/simmer-03-trajectories.html | 2640 +++++----- simmer-4.0.1/simmer/inst/doc/simmer-04-bank-1.html | 1368 ++--- simmer-4.0.1/simmer/inst/doc/simmer-04-bank-2.html | 1694 +++--- simmer-4.0.1/simmer/inst/doc/simmer-05-simpy.html | 912 ++- simmer-4.0.1/simmer/inst/doc/simmer-06-queueing.html | 518 + simmer-4.0.1/simmer/inst/doc/simmer-07-ctmc.html | 730 +- simmer-4.0.1/simmer/inst/doc/simmer-08-philosophers.html | 440 + simmer-4.0.1/simmer/inst/doc/simmer-aa-5G.html | 1089 ++-- simmer-4.0.1/simmer/inst/include/simmer/activity/log.h | 5 simmer-4.0.1/simmer/inst/include/simmer/activity/resource_internal.h | 79 simmer-4.0.1/simmer/inst/include/simmer/process/manager.h | 11 simmer-4.0.1/simmer/inst/include/simmer/process/source.h | 2 simmer-4.0.1/simmer/inst/include/simmer/simulator_impl.h | 15 simmer-4.0.1/simmer/man/batch.Rd | 3 simmer-4.0.1/simmer/man/generators.Rd |only simmer-4.0.1/simmer/man/get_capacity.Rd | 3 simmer-4.0.1/simmer/man/get_n_generated.Rd | 24 simmer-4.0.1/simmer/man/get_sources.Rd |only simmer-4.0.1/simmer/man/monitor.Rd | 5 simmer-4.0.1/simmer/man/select.Rd | 29 simmer-4.0.1/simmer/man/set_attribute.Rd | 12 simmer-4.0.1/simmer/man/simmer.Rd | 13 simmer-4.0.1/simmer/man/timeout.Rd | 7 simmer-4.0.1/simmer/src/Makevars | 2 simmer-4.0.1/simmer/src/RcppExports.cpp | 13 simmer-4.0.1/simmer/src/process.cpp | 6 simmer-4.0.1/simmer/tests/testthat.R | 3 simmer-4.0.1/simmer/tests/testthat/test-convenience-funcs.R | 12 simmer-4.0.1/simmer/tests/testthat/test-simmer-dataframe.R | 6 simmer-4.0.1/simmer/tests/testthat/test-simmer-generator.R | 6 simmer-4.0.1/simmer/tests/testthat/test-simmer-resource-schedule.R | 13 simmer-4.0.1/simmer/tests/testthat/test-simmer-resource.R | 3 simmer-4.0.1/simmer/tests/testthat/test-trajectory-select.R | 94 simmer-4.0.1/simmer/tests/testthat/test-wrap.R | 2 simmer-4.0.1/simmer/vignettes/simmer-02-jss.Rmd | 41 simmer-4.0.1/simmer/vignettes/simmer-03-trajectories.Rmd | 12 57 files changed, 6583 insertions(+), 4322 deletions(-)
Title: Improved Standard Evaluation Interfaces for Common Data
Manipulation Tasks
Description: The 'seplyr' (standard evaluation plying) package supplies improved
standard evaluation adapter methods for important common 'dplyr' data manipulation tasks.
In addition the 'seplyr' package supplies several new "key operations
bound together" methods. These include 'group_summarize()' (which
combines grouping, arranging and calculation in an atomic unit),
'add_group_summaries()' (which joins grouped summaries into a 'data.frame'
in a well documented manner), 'add_group_indices()' (which adds
per-group identifiers to a 'data.frame' without depending on row-order),
'partition_mutate_qt()' (which optimizes mutate sequences), and 'if_else_device()'
(which simulates per-row if-else blocks in expression sequences).
Author: John Mount [aut, cre],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between seplyr versions 0.5.9 dated 2018-07-20 and 0.8.0 dated 2018-09-10
seplyr-0.5.9/seplyr/inst/doc/example.R |only seplyr-0.5.9/seplyr/inst/doc/example.Rmd |only seplyr-0.5.9/seplyr/inst/doc/example.html |only seplyr-0.8.0/seplyr/DESCRIPTION | 12 +- seplyr-0.8.0/seplyr/MD5 | 51 ++++----- seplyr-0.8.0/seplyr/NEWS.md | 7 + seplyr-0.8.0/seplyr/R/arrange_se.R | 107 +++++++++++++++++--- seplyr-0.8.0/seplyr/R/group_by_se.R | 16 ++ seplyr-0.8.0/seplyr/R/mutate_nse.R | 5 seplyr-0.8.0/seplyr/R/mutate_se.R | 5 seplyr-0.8.0/seplyr/R/rename_se.R | 41 +++---- seplyr-0.8.0/seplyr/R/summarize_nse.R | 11 +- seplyr-0.8.0/seplyr/R/summarize_se.R | 26 ++++ seplyr-0.8.0/seplyr/inst/doc/MutatePartitioner.html | 4 seplyr-0.8.0/seplyr/inst/doc/named_map_builder.html | 4 seplyr-0.8.0/seplyr/inst/doc/rename_se.html | 4 seplyr-0.8.0/seplyr/inst/doc/seplyr.html | 4 seplyr-0.8.0/seplyr/inst/doc/using_seplyr.html | 6 - seplyr-0.8.0/seplyr/man/arrange_se.Rd | 50 ++++++++- seplyr-0.8.0/seplyr/man/gather_se.Rd | 3 seplyr-0.8.0/seplyr/man/group_by_se.Rd | 1 seplyr-0.8.0/seplyr/man/mutate_nse.Rd | 5 seplyr-0.8.0/seplyr/man/mutate_se.Rd | 9 - seplyr-0.8.0/seplyr/man/reexports.Rd | 16 -- seplyr-0.8.0/seplyr/man/rename_se.Rd | 5 seplyr-0.8.0/seplyr/man/spread_se.Rd | 4 seplyr-0.8.0/seplyr/man/summarize_nse.Rd | 6 - seplyr-0.8.0/seplyr/man/summarize_se.Rd | 21 +++ 28 files changed, 285 insertions(+), 138 deletions(-)
Title: 'rquery' for 'data.table'
Description: Implements the 'rquery' piped Codd-style query algebra using 'data.table'. This allows
for a high-speed in memory implementation of Codd-style data manipulation tools.
Author: John Mount [aut, cre],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between rqdatatable versions 0.1.4 dated 2018-08-18 and 1.0.0 dated 2018-09-10
DESCRIPTION | 10 +++++----- MD5 | 12 ++++++------ NEWS.md | 5 +++++ R/relop_extend.R | 8 ++++++-- R/relop_project.R | 2 -- inst/doc/GroupedSampling.html | 4 ++-- inst/doc/logisticexample.html | 4 ++-- 7 files changed, 26 insertions(+), 19 deletions(-)
Title: R Commander Miscellaneous Functions
Description: Various statistical, graphics, and data-management functions used by the Rcmdr package in the R Commander GUI for R.
Author: John Fox [aut, cre],
Robert Muenchen [ctb],
Dan Putler [ctb]
Maintainer: John Fox <jfox@mcmaster.ca>
Diff between RcmdrMisc versions 2.5-0 dated 2018-08-19 and 2.5-1 dated 2018-09-10
DESCRIPTION | 14 +++++++------- MD5 | 4 ++-- NEWS | 4 ++++ 3 files changed, 13 insertions(+), 9 deletions(-)
Title: Help to Fit of a Parametric Distribution to Non-Censored or
Censored Data
Description: Extends the fitdistr() function (of the MASS package) with several functions to help the fit of a parametric distribution to non-censored or censored data. Censored data may contain left censored, right censored and interval censored values, with several lower and upper bounds. In addition to maximum likelihood estimation (MLE), the package provides moment matching (MME), quantile matching (QME) and maximum goodness-of-fit estimation (MGE) methods (available only for non-censored data). Weighted versions of MLE, MME and QME are available. See e.g. Casella & Berger (2002). Statistical inference. Pacific Grove.
Author: Marie-Laure Delignette-Muller [aut],
Christophe Dutang [aut],
Regis Pouillot [ctb],
Jean-Baptiste Denis [ctb],
Aurelie Siberchicot [aut, cre]
Maintainer: Aurelie Siberchicot <aurelie.siberchicot@univ-lyon1.fr>
Diff between fitdistrplus versions 1.0-9 dated 2017-03-24 and 1.0-11 dated 2018-09-10
fitdistrplus-1.0-11/fitdistrplus/DESCRIPTION | 20 fitdistrplus-1.0-11/fitdistrplus/MD5 | 181 fitdistrplus-1.0-11/fitdistrplus/NAMESPACE | 172 fitdistrplus-1.0-11/fitdistrplus/R/CIcdfplot.R | 6 fitdistrplus-1.0-11/fitdistrplus/R/bootdist.R | 449 - fitdistrplus-1.0-11/fitdistrplus/R/bootdistcens.R | 389 - fitdistrplus-1.0-11/fitdistrplus/R/cdfcomp.R | 562 - fitdistrplus-1.0-11/fitdistrplus/R/cdfcompcens.R | 545 + fitdistrplus-1.0-11/fitdistrplus/R/denscomp.R | 255 fitdistrplus-1.0-11/fitdistrplus/R/fitbench.R | 4 fitdistrplus-1.0-11/fitdistrplus/R/fitdist.R | 636 +- fitdistrplus-1.0-11/fitdistrplus/R/fitdistcens.R | 410 - fitdistrplus-1.0-11/fitdistrplus/R/gofstat.R | 788 +- fitdistrplus-1.0-11/fitdistrplus/R/logLik-surface.R | 20 fitdistrplus-1.0-11/fitdistrplus/R/mgedist.R | 90 fitdistrplus-1.0-11/fitdistrplus/R/mledist.R | 136 fitdistrplus-1.0-11/fitdistrplus/R/mmedist.R | 117 fitdistrplus-1.0-11/fitdistrplus/R/plotdist.R | 508 - fitdistrplus-1.0-11/fitdistrplus/R/plotdistcens.R | 466 + fitdistrplus-1.0-11/fitdistrplus/R/ppcomp.R | 401 - fitdistrplus-1.0-11/fitdistrplus/R/ppcompcens.R |only fitdistrplus-1.0-11/fitdistrplus/R/qmedist.R | 68 fitdistrplus-1.0-11/fitdistrplus/R/qqcomp.R | 405 - fitdistrplus-1.0-11/fitdistrplus/R/qqcompcens.R |only fitdistrplus-1.0-11/fitdistrplus/R/quantiles.R | 4 fitdistrplus-1.0-11/fitdistrplus/R/util-cens2pseudo.R |only fitdistrplus-1.0-11/fitdistrplus/R/util-checkparam.R | 237 fitdistrplus-1.0-11/fitdistrplus/R/util-checkparamlist.R |only fitdistrplus-1.0-11/fitdistrplus/R/util-getparam.R |only fitdistrplus-1.0-11/fitdistrplus/R/util-manageparam.R |only fitdistrplus-1.0-11/fitdistrplus/R/util-startarg.R | 26 fitdistrplus-1.0-11/fitdistrplus/R/util-testdensity.R |only fitdistrplus-1.0-11/fitdistrplus/build/vignette.rds |binary fitdistrplus-1.0-11/fitdistrplus/data/danishmulti.rda |binary fitdistrplus-1.0-11/fitdistrplus/data/danishuni.rda |binary fitdistrplus-1.0-11/fitdistrplus/data/dataFAQlog1.rda |binary fitdistrplus-1.0-11/fitdistrplus/data/dataFAQscale1.rda |binary fitdistrplus-1.0-11/fitdistrplus/data/dataFAQscale2.rda |binary fitdistrplus-1.0-11/fitdistrplus/data/endosulfan.rda |binary fitdistrplus-1.0-11/fitdistrplus/data/fluazinam.rda |binary fitdistrplus-1.0-11/fitdistrplus/data/groundbeef.rda |binary fitdistrplus-1.0-11/fitdistrplus/data/salinity.rda |binary fitdistrplus-1.0-11/fitdistrplus/data/smokedfish.rda |binary fitdistrplus-1.0-11/fitdistrplus/data/toxocara.rda |binary fitdistrplus-1.0-11/fitdistrplus/inst/NEWS | 29 fitdistrplus-1.0-11/fitdistrplus/inst/doc/FAQ.Rmd | 2318 ++++--- fitdistrplus-1.0-11/fitdistrplus/inst/doc/FAQ.html | 485 + fitdistrplus-1.0-11/fitdistrplus/inst/doc/Optimalgo.html | 1990 +++--- fitdistrplus-1.0-11/fitdistrplus/inst/doc/paper2JSS.R | 43 fitdistrplus-1.0-11/fitdistrplus/inst/doc/paper2JSS.Rnw | 2926 +++++----- fitdistrplus-1.0-11/fitdistrplus/inst/doc/paper2JSS.pdf |binary fitdistrplus-1.0-11/fitdistrplus/man/bootdist.Rd | 440 - fitdistrplus-1.0-11/fitdistrplus/man/bootdistcens.Rd | 356 - fitdistrplus-1.0-11/fitdistrplus/man/fitdist.Rd | 1147 +-- fitdistrplus-1.0-11/fitdistrplus/man/fitdistcens.Rd | 29 fitdistrplus-1.0-11/fitdistrplus/man/graphcomp.Rd | 534 - fitdistrplus-1.0-11/fitdistrplus/man/graphcompcens.Rd |only fitdistrplus-1.0-11/fitdistrplus/man/logLik-plot.Rd | 2 fitdistrplus-1.0-11/fitdistrplus/man/mgedist.Rd | 26 fitdistrplus-1.0-11/fitdistrplus/man/mledist.Rd | 21 fitdistrplus-1.0-11/fitdistrplus/man/mmedist.Rd | 36 fitdistrplus-1.0-11/fitdistrplus/man/plotdistcens.Rd | 69 fitdistrplus-1.0-11/fitdistrplus/man/qmedist.Rd | 26 fitdistrplus-1.0-11/fitdistrplus/tests/t-bootdist.R | 582 + fitdistrplus-1.0-11/fitdistrplus/tests/t-bootdistcens.R | 60 fitdistrplus-1.0-11/fitdistrplus/tests/t-cdfcomp.R | 588 +- fitdistrplus-1.0-11/fitdistrplus/tests/t-cdfcompcens.R | 81 fitdistrplus-1.0-11/fitdistrplus/tests/t-cvg-algo.R | 212 fitdistrplus-1.0-11/fitdistrplus/tests/t-denscomp.R | 528 + fitdistrplus-1.0-11/fitdistrplus/tests/t-descdist.R | 71 fitdistrplus-1.0-11/fitdistrplus/tests/t-fitbench.R | 43 fitdistrplus-1.0-11/fitdistrplus/tests/t-fitdist-customoptim.R | 4 fitdistrplus-1.0-11/fitdistrplus/tests/t-fitdist.R | 856 +- fitdistrplus-1.0-11/fitdistrplus/tests/t-fitdistcens.R | 114 fitdistrplus-1.0-11/fitdistrplus/tests/t-getparam.R |only fitdistrplus-1.0-11/fitdistrplus/tests/t-gofstat.R | 110 fitdistrplus-1.0-11/fitdistrplus/tests/t-init-actuar.R |only fitdistrplus-1.0-11/fitdistrplus/tests/t-llplot.R | 72 fitdistrplus-1.0-11/fitdistrplus/tests/t-lnL-surf.R | 6 fitdistrplus-1.0-11/fitdistrplus/tests/t-manageparam.R |only fitdistrplus-1.0-11/fitdistrplus/tests/t-mledist-cens.R |only fitdistrplus-1.0-11/fitdistrplus/tests/t-mledist-nocens.R |only fitdistrplus-1.0-11/fitdistrplus/tests/t-mmedist.R | 6 fitdistrplus-1.0-11/fitdistrplus/tests/t-parallel.R | 78 fitdistrplus-1.0-11/fitdistrplus/tests/t-plotdistcens.R | 50 fitdistrplus-1.0-11/fitdistrplus/tests/t-ppcomp.R | 425 - fitdistrplus-1.0-11/fitdistrplus/tests/t-ppcompcens.R |only fitdistrplus-1.0-11/fitdistrplus/tests/t-prefit.R | 6 fitdistrplus-1.0-11/fitdistrplus/tests/t-qme-discrete.R | 10 fitdistrplus-1.0-11/fitdistrplus/tests/t-qqcomp.R | 418 - fitdistrplus-1.0-11/fitdistrplus/tests/t-qqcompcens.R |only fitdistrplus-1.0-11/fitdistrplus/tests/t-quantiledist.R | 4 fitdistrplus-1.0-11/fitdistrplus/tests/t-startfixarg-overall.R |only fitdistrplus-1.0-11/fitdistrplus/tests/t-util-testdensity.R |only fitdistrplus-1.0-11/fitdistrplus/tests/t-weird-ppcomp-cens.R |only fitdistrplus-1.0-11/fitdistrplus/tests/t-weird-qqcomp-cens.R |only fitdistrplus-1.0-11/fitdistrplus/vignettes/FAQ.Rmd | 2318 ++++--- fitdistrplus-1.0-11/fitdistrplus/vignettes/jssfitdistrplus.bib | 44 fitdistrplus-1.0-11/fitdistrplus/vignettes/paper2JSS.Rnw | 2926 +++++----- fitdistrplus-1.0-9/fitdistrplus/inst/doc/FAQ.R |only fitdistrplus-1.0-9/fitdistrplus/inst/doc/Optimalgo.R |only fitdistrplus-1.0-9/fitdistrplus/man/cdfcompcens.Rd |only fitdistrplus-1.0-9/fitdistrplus/tests/t-mledist.R |only 103 files changed, 14335 insertions(+), 12649 deletions(-)
Title: Fluid Data Transformations
Description: Supplies higher-order fluid data transform operators that include pivot and anti-pivot as special cases.
The methodology is describe in 'Zumel', 2018, "Fluid data reshaping with 'cdata'", <http://winvector.github.io/FluidData/FluidDataReshapingWithCdata.html> , doi:10.5281/zenodo.1173299 .
Based on the 'DBI' database interface.
Author: John Mount [aut, cre],
Nina Zumel [aut],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between cdata versions 0.7.4 dated 2018-08-17 and 1.0.0 dated 2018-09-10
DESCRIPTION | 16 ++--- MD5 | 18 +++--- NEWS.md | 4 + R/LocalOps.R | 35 +++++++++--- R/RowsColumns.R | 117 +++++++++++++++++++++++++++++++---------- README.md | 4 - inst/doc/cdata.html | 6 +- man/blocks_to_rowrecs.Rd | 12 ++-- man/checkColsFormUniqueKeys.Rd | 5 - man/rowrecs_to_blocks.Rd | 15 +++-- 10 files changed, 162 insertions(+), 70 deletions(-)
Title: Generate Assorted Books and Documents with R 'bookdown' Package
Description: A collection and selector of R 'bookdown' templates. 'bookdownplus' helps you write academic journal articles, guitar books, chemical equations, mails, calendars, and diaries. R 'bookdownplus' extends the features of 'bookdown', and simplifies the procedure. Users only have to choose a template, clarify the book title and author name, and then focus on writing the text. No need to struggle in 'YAML' and 'LaTeX'.
Author: Peng Zhao
Maintainer: Peng Zhao <pzhao@pzhao.net>
Diff between bookdownplus versions 1.3.2 dated 2017-10-10 and 1.4.6 dated 2018-09-10
bookdownplus-1.3.2/bookdownplus/inst/images/logo-mdpi.eps |only bookdownplus-1.3.2/bookdownplus/inst/rmd |only bookdownplus-1.3.2/bookdownplus/inst/showcase |only bookdownplus-1.3.2/bookdownplus/inst/style |only bookdownplus-1.3.2/bookdownplus/inst/tex |only bookdownplus-1.4.6/bookdownplus/DESCRIPTION | 13 bookdownplus-1.4.6/bookdownplus/MD5 | 231 ++++---------- bookdownplus-1.4.6/bookdownplus/NAMESPACE | 2 bookdownplus-1.4.6/bookdownplus/R/fun.R | 191 +++++++---- bookdownplus-1.4.6/bookdownplus/inst/proj/body.Rmd |only bookdownplus-1.4.6/bookdownplus/inst/proj/index.Rmd |only bookdownplus-1.4.6/bookdownplus/inst/yml |only bookdownplus-1.4.6/bookdownplus/inst/zip |only bookdownplus-1.4.6/bookdownplus/man/bd.Rd |only bookdownplus-1.4.6/bookdownplus/man/bookdownplus.Rd | 9 bookdownplus-1.4.6/bookdownplus/man/share.Rd |only 16 files changed, 206 insertions(+), 240 deletions(-)
Title: An R-Tool for Comprehensive Science Mapping Analysis
Description: Tool for quantitative research in scientometrics and bibliometrics.
It provides various routines for importing bibliographic data from SCOPUS (<http://scopus.com>),
Clarivate Analytics Web of Science (<http://www.webofknowledge.com/>), Cochrane Library (<http://www.cochranelibrary.com/>)
and PubMed (<https://www.ncbi.nlm.nih.gov/pubmed/>) databases, performing bibliometric analysis
and building networks for co-citation, coupling, scientific collaboration and co-word analysis.
Author: Massimo Aria [cre, aut],
Corrado Cuccurullo [aut]
Maintainer: Massimo Aria <aria@unina.it>
Diff between bibliometrix versions 1.9.4 dated 2018-06-25 and 2.0.0 dated 2018-09-10
DESCRIPTION | 18 ++-- MD5 | 72 +++++++++------- NAMESPACE | 7 + NEWS | 8 + R/biblioAnalysis.R | 7 - R/biblioNetwork.R | 4 R/biblioshiny.R |only R/conceptualStructure.R | 13 +-- R/convert2df.R | 6 + R/histNetwork.R | 47 ++++++---- R/histPlot.R | 9 +- R/metaTagExtraction.R | 8 + R/plot.bibliometrix.R | 4 R/retrievalByAuthorID.R | 30 ++++-- R/summary.bibliometrix.R | 52 ++++++------ R/tableTag.R | 7 + R/thematicEvolution.R | 8 + R/zzz.R | 5 - build/partial.rdb |binary build/vignette.rds |binary inst/biblioshiny |only inst/doc/bibliometrix-vignette.html | 156 +++++++++++++++++------------------- man/biblioNetwork.Rd | 3 man/biblioshiny.Rd |only man/cocMatrix.Rd | 3 man/cochrane2df.Rd | 1 man/conceptualStructure.Rd | 8 + man/convert2df.Rd | 1 man/isi2df.Rd | 1 man/isibib2df.Rd | 1 man/networkPlot.Rd | 9 +- man/pubmed2df.Rd | 1 man/retrievalByAuthorID.Rd | 5 - man/scopus2df.Rd | 1 man/summary.bibliometrix.Rd | 3 man/termExtraction.Rd | 6 - man/thematicEvolution.Rd | 6 + 37 files changed, 303 insertions(+), 207 deletions(-)
Title: 'Asio' C++ Header Files
Description: 'Asio' is a cross-platform C++ library for network and low-level
I/O programming that provides developers with a consistent asynchronous model
using a modern C++ approach. It is also included in Boost but requires linking
when used with Boost. Standalone it can be used header-only (provided a recent
compiler). 'Asio' is written and maintained by Christopher M. Kohlhoff, and
released under the 'Boost Software License', Version 1.0.
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between AsioHeaders versions 1.12.1 dated 2018-09-10 and 1.12.1-1 dated 2018-09-10
DESCRIPTION | 6 +++--- MD5 | 2 +- 2 files changed, 4 insertions(+), 4 deletions(-)
Title: Continuous-Time Movement Modeling
Description: Functions for identifying, fitting, and applying continuous-space, continuous-time stochastic movement models to animal tracking data.
The package is described in Calabrese & Fleming (2016) <doi:10.1111/2041-210X.12559> and its methods are based on those introduced in
Fleming et al (2014) <doi:10.1086/675504>,
Fleming et al (2014) <doi:10.1111/2041-210X.12176>,
Fleming et al (2015) <doi:10.1890/14-2010.1>,
Fleming et al (2016) <doi:10.1890/15-1607>,
Péron & Fleming et al (2016) <doi:10.1186/s40462-016-0084-7>,
Fleming & Calabrese (2016) <doi:10.1111/2041-210X.12673>,
Péron et al (2017) <doi:10.1002/ecm.1260>,
Fleming et al (2017) <doi:10.1016/j.ecoinf.2017.04.008>,
Fleming et al (2018) <doi:10.1002/eap.1704>,
and
Winner & Noonan et al (2018) <doi:10.1111/2041-210X.13027>.
Author: Christen H. Fleming [aut, cre],
Justin M. Calabrese [aut],
Xianghui Dong [ctb],
Kevin Winner [ctb],
Guillaume Péron [ctb],
Michael J. Noonan [ctb],
Bart Kranstauber [ctb],
Eliezer Gurarie [ctb],
Kamran Safi [ctb],
Paul C. Cross [dtc],
Thomas Mueller [dtc],
Rogério C. de Paula [dtc],
Thomas Akre [dtc],
Jonathan Drescher-Lehman [dtc]
Maintainer: Christen H. Fleming <flemingc@si.edu>
Diff between ctmm versions 0.5.1 dated 2018-08-07 and 0.5.2 dated 2018-09-10
DESCRIPTION | 8 MD5 | 80 +-- NAMESPACE | 3 NEWS.md | 17 R/1.R | 23 - R/ctmm.R | 5 R/extent.R | 2 R/generic.R | 3 R/kde.R | 8 R/krige.R | 3 R/likelihood.R | 34 + R/median.R | 6 R/optim.R | 14 R/outlier.R | 7 R/overlap.R | 30 - R/stats.R | 2 R/telemetry.R | 266 ++++++++---- R/uere.R | 542 ++++++++++++++++++++----- R/units.R | 20 TODO | 9 build/vignette.rds |binary data/buffalo.rda |binary data/coati.rda |binary data/datalist | 10 data/gazelle.rda |binary data/turtle.rda |binary data/wolf.rda |binary inst/doc/akde.R | 88 ++-- inst/doc/akde.html | 614 ++++++++++++---------------- inst/doc/error.R | 128 +++--- inst/doc/error.Rmd | 8 inst/doc/error.html | 791 ++++++++++++++++++------------------- inst/doc/periodogram.R | 102 ++-- inst/doc/periodogram.html | 876 ++++++++++++++++++++--------------------- inst/doc/variogram.R | 186 ++++---- inst/doc/variogram.html | 977 +++++++++++++++++++++++----------------------- man/as.telemetry.Rd | 20 man/ctmm-package.Rd | 4 man/overlap.Rd | 17 man/uere.Rd | 35 - vignettes/error.Rmd | 8 41 files changed, 2671 insertions(+), 2275 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-07-29 0.0.1
Title: Balanced and Spatially Balanced Sampling
Description: Select balanced and spatially balanced probability samples in multi-dimensional spaces with any prescribed inclusion probabilities. It contains fast (C++ via Rcpp) implementations of the included sampling methods. The local pivotal method and spatially correlated Poisson sampling (for spatially balanced sampling) are included. Also the cube method (for balanced sampling) and the local cube method (for doubly balanced sampling) are included.
Author: Anton Grafström, Jonathan Lisic
Maintainer: Anton Grafström <anton.grafstrom@gmail.com>
Diff between BalancedSampling versions 1.5.3 dated 2018-08-14 and 1.5.4 dated 2018-09-10
BalancedSampling-1.5.3/BalancedSampling/R/lpm2_kdtree.R |only BalancedSampling-1.5.3/BalancedSampling/man/lpm2_kdtree.Rd |only BalancedSampling-1.5.3/BalancedSampling/src/kdtree_lpm.c |only BalancedSampling-1.5.3/BalancedSampling/src/kdtree_lpm.h |only BalancedSampling-1.5.3/BalancedSampling/src/lpm3.c |only BalancedSampling-1.5.3/BalancedSampling/src/median.c |only BalancedSampling-1.5.3/BalancedSampling/src/median.h |only BalancedSampling-1.5.4/BalancedSampling/DESCRIPTION | 10 +++---- BalancedSampling-1.5.4/BalancedSampling/MD5 | 17 +++--------- BalancedSampling-1.5.4/BalancedSampling/NAMESPACE | 1 BalancedSampling-1.5.4/BalancedSampling/R/hlpm.R | 6 ++-- BalancedSampling-1.5.4/BalancedSampling/man/hlpm.Rd | 2 - BalancedSampling-1.5.4/BalancedSampling/src/RcppExports.cpp | 3 -- 13 files changed, 15 insertions(+), 24 deletions(-)
More information about BalancedSampling at CRAN
Permanent link
Title: Seasonal Analysis of Health Data
Description: Routines for the seasonal analysis of health data,
including regression models, time-stratified case-crossover,
plotting functions and residual checks, see Barnett and Dobson (2010) ISBN 978-3-642-10748-1. Thanks to Yuming Guo
for checking the case-crossover code.
Author: Adrian Barnett and Peter Baker
Maintainer: Adrian Barnett <a.barnett@qut.edu.au>
Diff between season versions 0.3.7 dated 2018-09-02 and 0.3.8 dated 2018-09-10
DESCRIPTION | 6 +-- MD5 | 14 +++---- R/plot.nsCosinor.R | 76 +++++++++++++++++++------------------- inst/doc/season-vignette.R | 17 ++++---- inst/doc/season-vignette.Rmd | 50 +++++++++++++------------ inst/doc/season-vignette.html | 82 ++++++++++++++++++++++-------------------- man/nscosinor.Rd | 2 - vignettes/season-vignette.Rmd | 50 +++++++++++++------------ 8 files changed, 155 insertions(+), 142 deletions(-)
Title: Data Structures, Summaries, and Visualisations for Missing Data
Description: Missing values are ubiquitous in data and need to be explored and
handled in the initial stages of analysis. 'naniar' provides data structures
and functions that facilitate the plotting of missing values and examination
of imputations. This allows missing data dependencies to be explored with
minimal deviation from the common work patterns of 'ggplot2' and tidy data.
Author: Nicholas Tierney [aut, cre] (<https://orcid.org/0000-0003-1460-8722>),
Di Cook [aut] (<https://orcid.org/0000-0002-3813-7155>),
Miles McBain [aut] (<https://orcid.org/0000-0003-2865-2548>),
Colin Fay [aut] (<https://orcid.org/0000-0001-7343-1846>),
Mitchell O'Hara-Wild [ctb],
Jim Hester [ctb],
Luke Smith [ctb]
Maintainer: Nicholas Tierney <nicholas.tierney@gmail.com>
Diff between naniar versions 0.3.1 dated 2018-06-08 and 0.4.0.0 dated 2018-09-10
naniar-0.3.1/naniar/man/are_shadow.Rd |only naniar-0.3.1/naniar/man/label_shadow_matrix.Rd |only naniar-0.3.1/naniar/tests/testthat/test-complete-x-pct.R |only naniar-0.3.1/naniar/tests/testthat/test-label-na.R |only naniar-0.4.0.0/naniar/DESCRIPTION | 27 naniar-0.4.0.0/naniar/LICENSE | 2 naniar-0.4.0.0/naniar/MD5 | 293 ++- naniar-0.4.0.0/naniar/NAMESPACE | 31 naniar-0.4.0.0/naniar/NEWS.md | 83 + naniar-0.4.0.0/naniar/R/add-cols.R | 171 +- naniar-0.4.0.0/naniar/R/add-n-prop-miss.R | 26 naniar-0.4.0.0/naniar/R/cast-shadows.R | 11 naniar-0.4.0.0/naniar/R/data-common-na-strings.R | 6 naniar-0.4.0.0/naniar/R/geom-miss-point.R | 35 naniar-0.4.0.0/naniar/R/gg-miss-case.R | 16 naniar-0.4.0.0/naniar/R/gg-miss-span.R | 4 naniar-0.4.0.0/naniar/R/gg-miss-upset.R |only naniar-0.4.0.0/naniar/R/gg-miss-var.R | 14 naniar-0.4.0.0/naniar/R/helpers.R | 6 naniar-0.4.0.0/naniar/R/impute-median.R |only naniar-0.4.0.0/naniar/R/impute_below.R | 33 naniar-0.4.0.0/naniar/R/impute_mean.R | 12 naniar-0.4.0.0/naniar/R/label-miss.R | 27 naniar-0.4.0.0/naniar/R/miss-complete-x-pct-prop.R | 67 naniar-0.4.0.0/naniar/R/miss-prop-pct-summary.R | 6 naniar-0.4.0.0/naniar/R/miss-scan-count.R | 16 naniar-0.4.0.0/naniar/R/miss-x-cumsum.R | 2 naniar-0.4.0.0/naniar/R/miss-x-run.R | 2 naniar-0.4.0.0/naniar/R/miss-x-span.R | 2 naniar-0.4.0.0/naniar/R/miss-x-summary.R | 108 + naniar-0.4.0.0/naniar/R/miss-x-table.R | 8 naniar-0.4.0.0/naniar/R/n-prop-miss-complete-rows.R | 12 naniar-0.4.0.0/naniar/R/nabular.R |only naniar-0.4.0.0/naniar/R/naniar-package.R | 5 naniar-0.4.0.0/naniar/R/prop-pct-var-case-miss-complete.R |only naniar-0.4.0.0/naniar/R/shade.R |only naniar-0.4.0.0/naniar/R/shadow-recode.R |only naniar-0.4.0.0/naniar/R/shadow-shifters.R | 8 naniar-0.4.0.0/naniar/R/shadow-verifiers.R |only naniar-0.4.0.0/naniar/R/shadows.R | 182 ++ naniar-0.4.0.0/naniar/R/stat-miss-point.R | 35 naniar-0.4.0.0/naniar/R/utils.R | 69 naniar-0.4.0.0/naniar/R/where-na.R | 3 naniar-0.4.0.0/naniar/README.md | 136 + naniar-0.4.0.0/naniar/build/vignette.rds |binary naniar-0.4.0.0/naniar/data/common_na_strings.rda |binary naniar-0.4.0.0/naniar/inst/doc/exploring-imputed-values.R |only naniar-0.4.0.0/naniar/inst/doc/exploring-imputed-values.Rmd |only naniar-0.4.0.0/naniar/inst/doc/exploring-imputed-values.html |only naniar-0.4.0.0/naniar/inst/doc/getting-started-w-naniar.R | 6 naniar-0.4.0.0/naniar/inst/doc/getting-started-w-naniar.Rmd | 38 naniar-0.4.0.0/naniar/inst/doc/getting-started-w-naniar.html | 288 ++- naniar-0.4.0.0/naniar/inst/doc/naniar-visualisation.R | 33 naniar-0.4.0.0/naniar/inst/doc/naniar-visualisation.Rmd | 51 naniar-0.4.0.0/naniar/inst/doc/naniar-visualisation.html | 230 +-- naniar-0.4.0.0/naniar/inst/doc/replace-with-na.R | 9 naniar-0.4.0.0/naniar/inst/doc/replace-with-na.Rmd | 65 naniar-0.4.0.0/naniar/inst/doc/replace-with-na.html | 227 +- naniar-0.4.0.0/naniar/inst/doc/special-missing-values.R |only naniar-0.4.0.0/naniar/inst/doc/special-missing-values.Rmd |only naniar-0.4.0.0/naniar/inst/doc/special-missing-values.html |only naniar-0.4.0.0/naniar/man/add_any_miss.Rd | 7 naniar-0.4.0.0/naniar/man/add_label_missings.Rd | 12 naniar-0.4.0.0/naniar/man/add_label_shadow.Rd | 9 naniar-0.4.0.0/naniar/man/bind_shadow.Rd | 4 naniar-0.4.0.0/naniar/man/common_na_strings.Rd | 6 naniar-0.4.0.0/naniar/man/figures/README-facet-by-month-1.png |binary naniar-0.4.0.0/naniar/man/figures/README-geom-miss-point-1.png |binary naniar-0.4.0.0/naniar/man/figures/README-gg-miss-span-1.png |binary naniar-0.4.0.0/naniar/man/figures/README-gg-miss-upset-1.png |only naniar-0.4.0.0/naniar/man/figures/README-gg-miss-var-1.png |binary naniar-0.4.0.0/naniar/man/figures/README-regular-geom-point-1.png |binary naniar-0.4.0.0/naniar/man/figures/README-shadow-impute-1.png |binary naniar-0.4.0.0/naniar/man/figures/README-shadow-w-ggplot-1.png |binary naniar-0.4.0.0/naniar/man/geom_miss_point.Rd | 9 naniar-0.4.0.0/naniar/man/gg_miss_upset.Rd |only naniar-0.4.0.0/naniar/man/impute_below.Rd | 51 naniar-0.4.0.0/naniar/man/impute_below_all.Rd |only naniar-0.4.0.0/naniar/man/impute_mean.Rd | 3 naniar-0.4.0.0/naniar/man/impute_median.Rd |only naniar-0.4.0.0/naniar/man/is_shade.Rd |only naniar-0.4.0.0/naniar/man/is_shadow.Rd | 23 naniar-0.4.0.0/naniar/man/label_missings.Rd | 19 naniar-0.4.0.0/naniar/man/label_shadow.Rd | 8 naniar-0.4.0.0/naniar/man/miss-complete-case-pct.Rd | 11 naniar-0.4.0.0/naniar/man/miss-complete-case-prop.Rd | 11 naniar-0.4.0.0/naniar/man/miss-complete-var-pct.Rd | 13 naniar-0.4.0.0/naniar/man/miss-complete-var-prop.Rd | 13 naniar-0.4.0.0/naniar/man/miss_case_summary.Rd | 14 naniar-0.4.0.0/naniar/man/miss_case_table.Rd | 2 naniar-0.4.0.0/naniar/man/miss_prop_summary.Rd | 2 naniar-0.4.0.0/naniar/man/miss_scan_count.Rd | 2 naniar-0.4.0.0/naniar/man/miss_summary.Rd | 2 naniar-0.4.0.0/naniar/man/miss_var_run.Rd | 2 naniar-0.4.0.0/naniar/man/miss_var_span.Rd | 2 naniar-0.4.0.0/naniar/man/miss_var_summary.Rd | 9 naniar-0.4.0.0/naniar/man/miss_var_table.Rd | 2 naniar-0.4.0.0/naniar/man/n-var-case-complete.Rd | 1 naniar-0.4.0.0/naniar/man/n_complete_row.Rd | 3 naniar-0.4.0.0/naniar/man/n_miss_row.Rd | 3 naniar-0.4.0.0/naniar/man/nabular.Rd |only naniar-0.4.0.0/naniar/man/naniar-ggproto.Rd | 2 naniar-0.4.0.0/naniar/man/naniar.Rd | 2 naniar-0.4.0.0/naniar/man/new_nabular.Rd |only naniar-0.4.0.0/naniar/man/new_shade.Rd |only naniar-0.4.0.0/naniar/man/new_shadow.Rd |only naniar-0.4.0.0/naniar/man/pct-miss-complete-case.Rd |only naniar-0.4.0.0/naniar/man/pct-miss-complete-var.Rd |only naniar-0.4.0.0/naniar/man/prop-miss-complete-case.Rd |only naniar-0.4.0.0/naniar/man/prop-miss-complete-var.Rd |only naniar-0.4.0.0/naniar/man/prop_complete_row.Rd | 3 naniar-0.4.0.0/naniar/man/prop_miss_row.Rd | 3 naniar-0.4.0.0/naniar/man/recode_shadow.Rd |only naniar-0.4.0.0/naniar/man/reexports.Rd | 3 naniar-0.4.0.0/naniar/man/scoped-impute_median.Rd |only naniar-0.4.0.0/naniar/man/shade.Rd |only naniar-0.4.0.0/naniar/man/shadow_expand_relevel.Rd |only naniar-0.4.0.0/naniar/man/shadow_long.Rd |only naniar-0.4.0.0/naniar/man/stat_miss_point.Rd | 10 naniar-0.4.0.0/naniar/man/test_if_shadow.Rd |only naniar-0.4.0.0/naniar/man/update_shadow.Rd |only naniar-0.4.0.0/naniar/man/what_levels.Rd |only naniar-0.4.0.0/naniar/man/where.Rd |only naniar-0.4.0.0/naniar/man/which_are_shade.Rd |only naniar-0.4.0.0/naniar/tests/figs/deps.txt | 8 naniar-0.4.0.0/naniar/tests/figs/geom-miss-point/geom-miss-point-jitter.svg |only naniar-0.4.0.0/naniar/tests/figs/geom-miss-point/geom-miss-point-prop-jitter.svg |only naniar-0.4.0.0/naniar/tests/figs/geom-miss-point/geom-miss-point-prop.svg |only naniar-0.4.0.0/naniar/tests/figs/geom-miss-point/geom-miss-point.svg | 372 ++-- naniar-0.4.0.0/naniar/tests/figs/gg-miss-case-cumsum/gg-miss-case-cumsum.svg | 84 - naniar-0.4.0.0/naniar/tests/figs/gg-miss-case/gg-miss-case-group-and-sort-show-pct.svg | 764 +++++----- naniar-0.4.0.0/naniar/tests/figs/gg-miss-case/gg-miss-case-group-and-sort.svg | 764 +++++----- naniar-0.4.0.0/naniar/tests/figs/gg-miss-case/gg-miss-case-group-show-pct.svg | 764 +++++----- naniar-0.4.0.0/naniar/tests/figs/gg-miss-case/gg-miss-case-group.svg | 764 +++++----- naniar-0.4.0.0/naniar/tests/figs/gg-miss-case/gg-miss-case-plot-show-pct.svg | 364 ++-- naniar-0.4.0.0/naniar/tests/figs/gg-miss-case/gg-miss-case-sort-show-pct.svg | 364 ++-- naniar-0.4.0.0/naniar/tests/figs/gg-miss-case/gg-miss-case-sort.svg | 370 ++-- naniar-0.4.0.0/naniar/tests/figs/gg-miss-case/gg-miss-case.svg | 370 ++-- naniar-0.4.0.0/naniar/tests/figs/gg-miss-fct/gg-miss-fct.svg | 670 ++++---- naniar-0.4.0.0/naniar/tests/figs/gg-miss-span/gg-miss-span-group.svg | 282 +-- naniar-0.4.0.0/naniar/tests/figs/gg-miss-span/gg-miss-span.svg | 116 - naniar-0.4.0.0/naniar/tests/figs/gg-miss-var-cumsum/gg-miss-var-cumsum.svg | 88 - naniar-0.4.0.0/naniar/tests/figs/gg-miss-var-plot/gg-miss-var-group-pct.svg | 364 ++-- 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naniar-0.4.0.0/naniar/tests/testthat/test-miss-case-summary.R | 27 naniar-0.4.0.0/naniar/tests/testthat/test-miss-case-table.R | 2 naniar-0.4.0.0/naniar/tests/testthat/test-miss-scan-count.R |only naniar-0.4.0.0/naniar/tests/testthat/test-miss-var-summary.R | 27 naniar-0.4.0.0/naniar/tests/testthat/test-miss-var-table.R | 2 naniar-0.4.0.0/naniar/tests/testthat/test-miss-x-pct.R | 107 + naniar-0.4.0.0/naniar/tests/testthat/test-nabular.R |only naniar-0.4.0.0/naniar/tests/testthat/test-shade-verifiers.R |only naniar-0.4.0.0/naniar/tests/testthat/test-shade.R |only naniar-0.4.0.0/naniar/tests/testthat/test-shadow-identifiers.R |only naniar-0.4.0.0/naniar/tests/testthat/test-shadow-long.R |only naniar-0.4.0.0/naniar/tests/testthat/test-special-missing-values.R |only naniar-0.4.0.0/naniar/vignettes/exploring-imputed-values.Rmd |only naniar-0.4.0.0/naniar/vignettes/getting-started-w-naniar.Rmd | 38 naniar-0.4.0.0/naniar/vignettes/naniar-visualisation.Rmd | 51 naniar-0.4.0.0/naniar/vignettes/replace-with-na.Rmd | 65 naniar-0.4.0.0/naniar/vignettes/special-missing-values.Rmd |only 175 files changed, 5696 insertions(+), 4693 deletions(-)
Title: 'Asio' C++ Header Files
Description: 'Asio' is a cross-platform C++ library for network and low-level
I/O programming that provides developers with a consistent asynchronous model
using a modern C++ approach. It is also included in Boost but requires linking
when used with Boost. Standalone it can be used header-only (provided a recent
compiler). 'Asio' is written and maintained by Christopher M. Kohlhoff, and
released under the 'Boost Software License', Version 1.0.
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between AsioHeaders versions 1.11.0-1 dated 2016-01-07 and 1.12.1 dated 2018-09-10
AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/detail/impl/win_iocp_io_service.hpp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/detail/impl/win_iocp_io_service.ipp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/detail/win_iocp_io_service.hpp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/executor_work.hpp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/impl/io_service.hpp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/impl/io_service.ipp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/impl/system_executor.ipp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/ip/address_iterator_v4.hpp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/ip/address_iterator_v6.hpp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/ip/address_range_v4.hpp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/ip/address_range_v6.hpp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/package.hpp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/ts/io_service.hpp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/ts/networking.hpp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/ts/thread_pool.hpp |only AsioHeaders-1.11.0-1/AsioHeaders/inst/include/asio/wrap.hpp |only AsioHeaders-1.12.1/AsioHeaders/ChangeLog | 16 AsioHeaders-1.12.1/AsioHeaders/DESCRIPTION | 18 AsioHeaders-1.12.1/AsioHeaders/MD5 | 945 ++-- AsioHeaders-1.12.1/AsioHeaders/README.md | 20 AsioHeaders-1.12.1/AsioHeaders/inst/COPYRIGHTS | 6 AsioHeaders-1.12.1/AsioHeaders/inst/NEWS.Rd | 13 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio.hpp | 23 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/associated_allocator.hpp | 10 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/associated_executor.hpp | 9 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/async_result.hpp | 164 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_datagram_socket.hpp | 185 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_deadline_timer.hpp | 141 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_io_object.hpp | 75 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_raw_socket.hpp | 184 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_seq_packet_socket.hpp | 139 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_serial_port.hpp | 77 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_signal_set.hpp | 63 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_socket.hpp | 354 + AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_socket_acceptor.hpp | 982 ++++ AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_socket_iostream.hpp | 195 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_socket_streambuf.hpp | 709 +-- AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_stream_socket.hpp | 159 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_streambuf.hpp | 11 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_streambuf_fwd.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/basic_waitable_timer.hpp | 189 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/bind_executor.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/buffer.hpp | 2027 +++------- AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/buffered_read_stream.hpp | 42 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/buffered_read_stream_fwd.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/buffered_stream.hpp | 32 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/buffered_stream_fwd.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/buffered_write_stream.hpp | 42 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/buffered_write_stream_fwd.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/buffers_iterator.hpp | 82 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/completion_condition.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/connect.hpp | 688 ++- AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/coroutine.hpp | 14 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/datagram_socket_service.hpp | 114 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/deadline_timer.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/deadline_timer_service.hpp | 27 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/defer.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/array.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/array_fwd.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/assert.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/atomic_count.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/base_from_completion_cond.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/bind_handler.hpp | 557 ++ AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/buffer_resize_guard.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/buffer_sequence_adapter.hpp | 263 + AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/buffered_stream_storage.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/call_stack.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/chrono.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/chrono_time_traits.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/completion_handler.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/concurrency_hint.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/conditionally_enabled_event.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/conditionally_enabled_mutex.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/config.hpp | 385 + AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/consuming_buffers.hpp | 452 +- AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/cstddef.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/cstdint.hpp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/date_time_fwd.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/deadline_timer_service.hpp | 42 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/dependent_type.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/descriptor_ops.hpp | 3 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/descriptor_read_op.hpp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/descriptor_write_op.hpp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/dev_poll_reactor.hpp | 26 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/epoll_reactor.hpp | 36 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/event.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/eventfd_select_interrupter.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/executor_op.hpp | 14 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/fd_set_adapter.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/fenced_block.hpp | 6 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/functional.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/gcc_arm_fenced_block.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/gcc_hppa_fenced_block.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/gcc_sync_fenced_block.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/gcc_x86_fenced_block.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/global.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/handler_alloc_helpers.hpp | 72 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/handler_cont_helpers.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/handler_invoke_helpers.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/handler_tracking.hpp | 97 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/handler_type_requirements.hpp | 104 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/handler_work.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/hash_map.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/buffer_sequence_adapter.ipp | 12 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/descriptor_ops.ipp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/dev_poll_reactor.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/dev_poll_reactor.ipp | 84 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/epoll_reactor.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/epoll_reactor.ipp | 175 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/eventfd_select_interrupter.ipp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/handler_tracking.ipp | 107 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/kqueue_reactor.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/kqueue_reactor.ipp | 193 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/null_event.ipp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/pipe_select_interrupter.ipp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/posix_event.ipp | 14 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/posix_mutex.ipp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/posix_thread.ipp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/posix_tss_ptr.ipp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/reactive_descriptor_service.ipp | 40 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/reactive_serial_port_service.ipp | 13 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/reactive_socket_service_base.ipp | 53 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/resolver_service_base.ipp | 84 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/scheduler.ipp | 117 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/select_reactor.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/select_reactor.ipp | 25 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/service_registry.hpp | 30 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/service_registry.ipp | 10 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/signal_set_service.ipp | 62 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/socket_ops.ipp | 201 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/socket_select_interrupter.ipp | 5 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/strand_executor_service.hpp | 65 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/strand_executor_service.ipp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/strand_service.hpp | 18 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/strand_service.ipp | 22 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/throw_error.ipp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/timer_queue_ptime.ipp | 17 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/timer_queue_set.ipp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/win_event.ipp | 15 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/win_iocp_handle_service.ipp | 48 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/win_iocp_io_context.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/win_iocp_io_context.ipp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/win_iocp_serial_port_service.ipp | 9 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/win_iocp_socket_service_base.ipp | 99 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/win_mutex.ipp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/win_object_handle_service.ipp | 37 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/win_static_mutex.ipp | 20 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/win_thread.ipp | 14 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/win_tss_ptr.ipp | 6 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/winrt_ssocket_service_base.ipp | 57 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/winrt_timer_scheduler.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/winrt_timer_scheduler.ipp | 18 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/impl/winsock_init.ipp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/io_control.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/is_buffer_sequence.hpp | 56 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/is_executor.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/keyword_tss_ptr.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/kqueue_reactor.hpp | 29 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/local_free_on_block_exit.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/macos_fenced_block.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/memory.hpp | 14 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/mutex.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/noncopyable.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/null_event.hpp | 22 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/null_fenced_block.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/null_global.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/null_mutex.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/null_reactor.hpp | 6 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/null_signal_blocker.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/null_socket_service.hpp | 49 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/null_static_mutex.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/null_thread.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/null_tss_ptr.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/object_pool.hpp | 27 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/old_win_sdk_compat.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/op_queue.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/operation.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/pipe_select_interrupter.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/pop_options.hpp | 32 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/posix_event.hpp | 38 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/posix_fd_set_adapter.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/posix_global.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/posix_mutex.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/posix_signal_blocker.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/posix_static_mutex.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/posix_thread.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/posix_tss_ptr.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/push_options.hpp | 35 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactive_descriptor_service.hpp | 28 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactive_null_buffers_op.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactive_serial_port_service.hpp | 18 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactive_socket_accept_op.hpp | 113 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactive_socket_connect_op.hpp | 13 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactive_socket_recv_op.hpp | 20 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactive_socket_recvfrom_op.hpp | 13 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactive_socket_recvmsg_op.hpp | 15 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactive_socket_send_op.hpp | 28 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactive_socket_sendto_op.hpp | 15 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactive_socket_service.hpp | 111 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactive_socket_service_base.hpp | 62 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactive_wait_op.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactor.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactor_fwd.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactor_op.hpp | 10 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/reactor_op_queue.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/recycling_allocator.hpp | 6 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/regex_fwd.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/resolve_endpoint_op.hpp | 41 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/resolve_op.hpp | 100 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/resolve_query_op.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/resolver_service.hpp | 52 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/resolver_service_base.hpp | 49 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/scheduler.hpp | 41 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/scheduler_operation.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/scheduler_thread_info.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/scoped_lock.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/scoped_ptr.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/select_interrupter.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/select_reactor.hpp | 25 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/service_registry.hpp | 37 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/signal_blocker.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/signal_handler.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/signal_init.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/signal_op.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/signal_set_service.hpp | 22 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/socket_holder.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/socket_ops.hpp | 11 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/socket_option.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/socket_select_interrupter.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/socket_types.hpp | 24 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/solaris_fenced_block.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/static_mutex.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/std_event.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/std_fenced_block.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/std_global.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/std_mutex.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/std_static_mutex.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/std_thread.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/strand_executor_service.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/strand_service.hpp | 18 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/string_view.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/thread.hpp | 6 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/thread_context.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/thread_group.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/thread_info_base.hpp | 60 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/throw_error.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/throw_exception.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/timer_queue.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/timer_queue_base.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/timer_queue_ptime.hpp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/timer_queue_set.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/timer_scheduler.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/timer_scheduler_fwd.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/tss_ptr.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/type_traits.hpp | 11 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/variadic_templates.hpp | 20 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/wait_handler.hpp | 6 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/wait_op.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_event.hpp | 27 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_fd_set_adapter.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_fenced_block.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_global.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_handle_read_op.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_handle_service.hpp | 27 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_handle_write_op.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_io_context.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_null_buffers_op.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_operation.hpp | 6 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_overlapped_op.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_overlapped_ptr.hpp | 22 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_serial_port_service.hpp | 18 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_accept_op.hpp | 134 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_connect_op.hpp | 9 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_recv_op.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_recvfrom_op.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_recvmsg_op.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_send_op.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_service.hpp | 114 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_socket_service_base.hpp | 79 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_thread_info.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_iocp_wait_op.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_mutex.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_object_handle_service.hpp | 18 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_static_mutex.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_thread.hpp | 10 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/win_tss_ptr.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/winapp_thread.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/wince_thread.hpp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/winrt_async_manager.hpp | 28 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/winrt_async_op.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/winrt_resolve_op.hpp | 19 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/winrt_resolver_service.hpp | 62 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/winrt_socket_connect_op.hpp | 6 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/winrt_socket_recv_op.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/winrt_socket_send_op.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/winrt_ssocket_service.hpp | 20 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/winrt_ssocket_service_base.hpp | 26 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/winrt_timer_scheduler.hpp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/winrt_utils.hpp | 5 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/winsock_init.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/work_dispatcher.hpp | 12 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/detail/wrapped_handler.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/dispatch.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/error.hpp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/error_code.hpp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/execution_context.hpp | 48 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/executor.hpp | 57 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/executor_work_guard.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/experimental |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/experimental.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/generic/basic_endpoint.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/generic/datagram_protocol.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/generic/detail/endpoint.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/generic/detail/impl/endpoint.ipp | 5 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/generic/raw_protocol.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/generic/seq_packet_protocol.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/generic/stream_protocol.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/handler_alloc_hook.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/handler_continuation_hook.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/handler_invoke_hook.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/handler_type.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/high_resolution_timer.hpp | 27 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/buffered_read_stream.hpp | 19 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/buffered_write_stream.hpp | 25 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/connect.hpp | 640 ++- AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/defer.hpp | 26 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/dispatch.hpp | 27 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/error.ipp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/error_code.ipp | 57 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/execution_context.hpp | 5 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/execution_context.ipp | 12 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/executor.hpp | 38 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/executor.ipp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/handler_alloc_hook.ipp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/io_context.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/io_context.ipp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/post.hpp | 26 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/read.hpp | 481 -- AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/read_at.hpp | 430 -- AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/read_until.hpp | 289 - AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/serial_port_base.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/serial_port_base.ipp | 60 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/spawn.hpp | 231 - AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/src.cpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/src.hpp | 10 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/system_context.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/system_context.ipp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/system_executor.hpp | 48 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/thread_pool.hpp | 67 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/thread_pool.ipp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/use_future.hpp | 940 ++++ AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/write.hpp | 561 -- AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/impl/write_at.hpp | 503 -- AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/io_context.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/io_context_strand.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/io_service.hpp | 698 --- AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/io_service_strand.hpp | 352 - AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/address.hpp | 118 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/address_v4.hpp | 74 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/address_v4_iterator.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/address_v4_range.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/address_v6.hpp | 30 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/address_v6_iterator.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/address_v6_range.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/bad_address_cast.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/basic_endpoint.hpp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/basic_resolver.hpp | 882 ++++ AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/basic_resolver_entry.hpp | 27 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/basic_resolver_iterator.hpp | 134 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/basic_resolver_query.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/basic_resolver_results.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/detail/endpoint.hpp | 10 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/detail/impl/endpoint.ipp | 69 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/detail/socket_option.hpp | 18 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/host_name.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/icmp.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/impl/address.hpp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/impl/address.ipp | 90 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/impl/address_v4.hpp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/impl/address_v4.ipp | 62 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/impl/address_v6.hpp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/impl/address_v6.ipp | 28 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/impl/basic_endpoint.hpp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/impl/host_name.ipp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/impl/network_v4.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/impl/network_v4.ipp | 38 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/impl/network_v6.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/impl/network_v6.ipp | 40 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/multicast.hpp | 16 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/network_v4.hpp | 41 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/network_v6.hpp | 37 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/resolver_base.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/resolver_query_base.hpp | 93 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/resolver_service.hpp | 66 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/tcp.hpp | 6 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/udp.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/unicast.hpp | 6 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ip/v6_only.hpp | 6 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/is_executor.hpp | 20 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/is_read_buffered.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/is_write_buffered.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/local/basic_endpoint.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/local/connect_pair.hpp | 44 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/local/datagram_protocol.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/local/detail/endpoint.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/local/detail/impl/endpoint.ipp | 5 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/local/stream_protocol.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/packaged_task.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/placeholders.hpp | 32 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/posix/basic_descriptor.hpp | 71 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/posix/basic_stream_descriptor.hpp | 26 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/posix/descriptor.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/posix/descriptor_base.hpp | 11 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/posix/stream_descriptor.hpp | 329 + AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/posix/stream_descriptor_service.hpp | 65 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/post.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/raw_socket_service.hpp | 114 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/read.hpp | 59 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/read_at.hpp | 19 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/read_until.hpp | 127 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/seq_packet_socket_service.hpp | 110 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/serial_port.hpp | 739 +++ AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/serial_port_base.hpp | 22 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/serial_port_service.hpp | 63 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/signal_set.hpp | 425 ++ AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/signal_set_service.hpp | 51 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/socket_acceptor_service.hpp | 138 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/socket_base.hpp | 93 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/spawn.hpp | 10 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/context.hpp | 50 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/context_base.hpp | 13 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/detail/buffered_handshake_op.hpp | 42 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/detail/engine.hpp | 6 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/detail/handshake_op.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/detail/impl/engine.ipp | 41 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/detail/impl/openssl_init.ipp | 42 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/detail/io.hpp | 10 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/detail/openssl_init.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/detail/openssl_types.hpp | 6 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/detail/password_callback.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/detail/read_op.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/detail/shutdown_op.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/detail/stream_core.hpp | 12 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/detail/verify_callback.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/detail/write_op.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/error.hpp | 47 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/impl/context.hpp | 12 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/impl/context.ipp | 416 +- AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/impl/error.ipp | 47 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/impl/rfc2818_verification.ipp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/impl/src.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/rfc2818_verification.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/stream.hpp | 80 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/stream_base.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/verify_context.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ssl/verify_mode.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/steady_timer.hpp | 27 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/strand.hpp | 32 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/stream_socket_service.hpp | 110 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/streambuf.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/system_context.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/system_error.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/system_executor.hpp | 47 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/system_timer.hpp | 23 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/thread.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/thread_pool.hpp | 49 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/time_traits.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ts/buffer.hpp | 3 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ts/executor.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ts/internet.hpp | 8 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ts/io_context.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ts/net.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ts/netfwd.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ts/socket.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/ts/timer.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/unyield.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/use_future.hpp | 73 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/uses_executor.hpp | 2 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/version.hpp | 4 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/wait_traits.hpp | 10 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/waitable_timer_service.hpp | 27 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/windows/basic_handle.hpp | 37 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/windows/basic_object_handle.hpp | 24 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/windows/basic_random_access_handle.hpp | 26 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/windows/basic_stream_handle.hpp | 26 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/windows/object_handle.hpp | 349 + AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/windows/object_handle_service.hpp | 41 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/windows/overlapped_handle.hpp |only AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/windows/overlapped_ptr.hpp | 12 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/windows/random_access_handle.hpp | 347 + AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/windows/random_access_handle_service.hpp | 45 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/windows/stream_handle.hpp | 331 + AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/windows/stream_handle_service.hpp | 43 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/write.hpp | 59 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/write_at.hpp | 19 AsioHeaders-1.12.1/AsioHeaders/inst/include/asio/yield.hpp | 2 497 files changed, 17225 insertions(+), 9658 deletions(-)
Title: Time Series with Matrix Profile
Description: A toolkit implementing the Matrix Profile concept that was created by CS-UCR <http://www.cs.ucr.edu/~eamonn/MatrixProfile.html>.
Author: Francisco Bischoff [aut, cre] (<https://orcid.org/0000-0002-5301-8672>),
Michael Yeh [res, ccp, ctb] (<https://orcid.org/0000-0002-9807-2963>),
Diego Silva [res, ccp, ctb] (<https://orcid.org/0000-0002-5184-9413>),
Yan Zhu [res, ccp, ctb] (<https://orcid.org/0000-0002-5952-2108>),
Hoang Dau [res, ccp, ctb] (<https://orcid.org/0000-0003-2439-5185>)
Maintainer: Francisco Bischoff <fbischoff@med.up.pt>
Diff between tsmp versions 0.2.12 dated 2018-08-17 and 0.3.1 dated 2018-09-10
tsmp-0.2.12/tsmp/R/m_guide_search.R |only tsmp-0.2.12/tsmp/R/m_unconstrain_search.R |only tsmp-0.2.12/tsmp/R/mass_pre.R |only tsmp-0.2.12/tsmp/R/mstomp_par.R |only tsmp-0.2.12/tsmp/R/sdts_predict.R |only tsmp-0.2.12/tsmp/R/sdts_train.R |only tsmp-0.2.12/tsmp/R/stamp_par.R |only tsmp-0.2.12/tsmp/R/test_data.R |only tsmp-0.2.12/tsmp/R/toy_data.R |only tsmp-0.2.12/tsmp/R/tsmp-package.R |only tsmp-0.2.12/tsmp/data/test_data.rda |only tsmp-0.2.12/tsmp/data/toy_data.rda |only tsmp-0.2.12/tsmp/man/compute.f.meas.Rd |only tsmp-0.2.12/tsmp/man/fast.movavg.Rd |only tsmp-0.2.12/tsmp/man/fast.movsd.Rd |only tsmp-0.2.12/tsmp/man/golden.section.2.Rd |only tsmp-0.2.12/tsmp/man/golden.section.Rd |only tsmp-0.2.12/tsmp/man/guide.search.Rd |only tsmp-0.2.12/tsmp/man/mass.pre.Rd |only tsmp-0.2.12/tsmp/man/mode.Rd |only tsmp-0.2.12/tsmp/man/mstomp.par.Rd |only tsmp-0.2.12/tsmp/man/sdts.f.score.Rd |only tsmp-0.2.12/tsmp/man/sdts.predict.Rd |only tsmp-0.2.12/tsmp/man/sdts.train.Rd |only tsmp-0.2.12/tsmp/man/stamp.par.Rd |only tsmp-0.2.12/tsmp/man/std.Rd |only tsmp-0.2.12/tsmp/man/test_data.Rd |only tsmp-0.2.12/tsmp/man/toy_data.Rd |only tsmp-0.2.12/tsmp/man/tsmp-package.Rd |only tsmp-0.2.12/tsmp/man/unconstrain.search.Rd |only tsmp-0.2.12/tsmp/tests/testthat/test.basics.R |only tsmp-0.2.12/tsmp/tests/testthat/test.stamps.R |only tsmp-0.2.12/tsmp/tests/testthat/test.z.update_version.R |only tsmp-0.3.1/tsmp/DESCRIPTION | 31 tsmp-0.3.1/tsmp/LICENSE | 4 tsmp-0.3.1/tsmp/MD5 | 133 +- tsmp-0.3.1/tsmp/NAMESPACE | 66 - tsmp-0.3.1/tsmp/NEWS | 72 + tsmp-0.3.1/tsmp/NEWS.md |only tsmp-0.3.1/tsmp/R/aaa.R |only tsmp-0.3.1/tsmp/R/annotations.R |only tsmp-0.3.1/tsmp/R/find-chains.R |only tsmp-0.3.1/tsmp/R/find-motifs.R |only tsmp-0.3.1/tsmp/R/fluss.R |only tsmp-0.3.1/tsmp/R/mass-pre.R |only tsmp-0.3.1/tsmp/R/mass.R | 102 - tsmp-0.3.1/tsmp/R/misc.R | 900 ++++++++++++++-- tsmp-0.3.1/tsmp/R/mp-fluss-data.R |only tsmp-0.3.1/tsmp/R/mp-gait-data.R |only tsmp-0.3.1/tsmp/R/mp-test-data.R |only tsmp-0.3.1/tsmp/R/mp-toy-data.R |only tsmp-0.3.1/tsmp/R/mstomp-par.R |only tsmp-0.3.1/tsmp/R/mstomp.R | 589 +++++----- tsmp-0.3.1/tsmp/R/plot.R |only tsmp-0.3.1/tsmp/R/print.R |only tsmp-0.3.1/tsmp/R/salient.R |only tsmp-0.3.1/tsmp/R/scrimp.R |only tsmp-0.3.1/tsmp/R/sdts-predict.R |only tsmp-0.3.1/tsmp/R/sdts-train.R |only tsmp-0.3.1/tsmp/R/simple.R |only tsmp-0.3.1/tsmp/R/stamp-par.R |only tsmp-0.3.1/tsmp/R/stamp.R | 350 +++--- tsmp-0.3.1/tsmp/R/stomp-par.R |only tsmp-0.3.1/tsmp/R/stomp.R |only tsmp-0.3.1/tsmp/R/sysdata.rda |only tsmp-0.3.1/tsmp/R/tsmp.R |only tsmp-0.3.1/tsmp/README.md | 106 + tsmp-0.3.1/tsmp/data/datalist | 6 tsmp-0.3.1/tsmp/data/mp_fluss_data.rda |only tsmp-0.3.1/tsmp/data/mp_gait_data.rda |only tsmp-0.3.1/tsmp/data/mp_test_data.rda |only tsmp-0.3.1/tsmp/data/mp_toy_data.rda |only tsmp-0.3.1/tsmp/inst |only tsmp-0.3.1/tsmp/man/as.matrixprofile.Rd |only tsmp-0.3.1/tsmp/man/av_apply.Rd |only tsmp-0.3.1/tsmp/man/av_complexity.Rd |only tsmp-0.3.1/tsmp/man/av_hardlimit_artifact.Rd |only tsmp-0.3.1/tsmp/man/av_motion_artifact.Rd |only tsmp-0.3.1/tsmp/man/av_stop_word.Rd |only tsmp-0.3.1/tsmp/man/av_zerocrossing.Rd |only tsmp-0.3.1/tsmp/man/fast_movavg.Rd |only tsmp-0.3.1/tsmp/man/fast_movsd.Rd |only tsmp-0.3.1/tsmp/man/figures/logo.png |binary tsmp-0.3.1/tsmp/man/find_chains.Rd |only tsmp-0.3.1/tsmp/man/find_motif.Rd |only tsmp-0.3.1/tsmp/man/fluss.Rd |only tsmp-0.3.1/tsmp/man/fluss_cac.Rd |only tsmp-0.3.1/tsmp/man/fluss_extract.Rd |only tsmp-0.3.1/tsmp/man/fluss_score.Rd |only tsmp-0.3.1/tsmp/man/mass.Rd | 54 tsmp-0.3.1/tsmp/man/mass_pre.Rd |only tsmp-0.3.1/tsmp/man/mp_fluss_data.Rd |only tsmp-0.3.1/tsmp/man/mp_gait_data.Rd |only tsmp-0.3.1/tsmp/man/mp_test_data.Rd |only tsmp-0.3.1/tsmp/man/mp_toy_data.Rd |only tsmp-0.3.1/tsmp/man/mstomp.Rd | 90 + tsmp-0.3.1/tsmp/man/plot.Rd |only tsmp-0.3.1/tsmp/man/plot_arcs.Rd |only tsmp-0.3.1/tsmp/man/salient_subsequences.Rd |only tsmp-0.3.1/tsmp/man/scrimp.Rd |only tsmp-0.3.1/tsmp/man/sdts_predict.Rd |only tsmp-0.3.1/tsmp/man/sdts_score.Rd |only tsmp-0.3.1/tsmp/man/sdts_train.Rd |only tsmp-0.3.1/tsmp/man/simple_fast.Rd |only tsmp-0.3.1/tsmp/man/stamp.Rd | 87 + tsmp-0.3.1/tsmp/man/stomp.Rd |only tsmp-0.3.1/tsmp/man/tsmp.Rd |only tsmp-0.3.1/tsmp/tests/spelling.R |only tsmp-0.3.1/tsmp/tests/testthat.R | 8 tsmp-0.3.1/tsmp/tests/testthat/test-annotation.R |only tsmp-0.3.1/tsmp/tests/testthat/test-basics.R |only tsmp-0.3.1/tsmp/tests/testthat/test-find-chains.R |only tsmp-0.3.1/tsmp/tests/testthat/test-fluss.R |only tsmp-0.3.1/tsmp/tests/testthat/test-mstomp-search.R |only tsmp-0.3.1/tsmp/tests/testthat/test-salient.R |only tsmp-0.3.1/tsmp/tests/testthat/test-sdts.R |only tsmp-0.3.1/tsmp/tests/testthat/test-simple.R |only tsmp-0.3.1/tsmp/tests/testthat/test-stamps.R |only tsmp-0.3.1/tsmp/tests/testthat/test-z-update-version.R |only 119 files changed, 1887 insertions(+), 711 deletions(-)
Title: Fast R and C++ Access to NIfTI Images
Description: Provides very fast read and write access to images stored in the
NIfTI-1 and ANALYZE-7.5 formats, with seamless synchronisation between
compiled C and interpreted R code. Also provides a C/C++ API that can be
used by other packages. Not to be confused with 'RNiftyReg', which performs
image registration.
Author: Jon Clayden [cre, aut],
Bob Cox [aut],
Mark Jenkinson [aut],
Matt Hall [ctb],
Rick Reynolds [ctb],
Kate Fissell [ctb],
Jean-loup Gailly [cph],
Mark Adler [cph]
Maintainer: Jon Clayden <code@clayden.org>
Diff between RNifti versions 0.8.1 dated 2018-07-05 and 0.9.0 dated 2018-09-10
RNifti-0.8.1/RNifti/inst/extdata/example_compressed.nii.gz |only RNifti-0.8.1/RNifti/man/dumpNifti.Rd |only RNifti-0.9.0/RNifti/DESCRIPTION | 17 RNifti-0.9.0/RNifti/MD5 | 82 +- RNifti-0.9.0/RNifti/NAMESPACE | 6 RNifti-0.9.0/RNifti/NEWS | 36 + RNifti-0.9.0/RNifti/R/image.R | 33 + RNifti-0.9.0/RNifti/R/nifti.R | 84 ++ RNifti-0.9.0/RNifti/R/xform.R | 39 + RNifti-0.9.0/RNifti/README.md | 122 ++- RNifti-0.9.0/RNifti/inst/doxygen/html/_nifti_image_8h_source.html | 96 +-- RNifti-0.9.0/RNifti/inst/doxygen/html/annotated.html | 6 RNifti-0.9.0/RNifti/inst/doxygen/html/class_r_nifti_1_1_nifti_image-members.html | 11 RNifti-0.9.0/RNifti/inst/doxygen/html/class_r_nifti_1_1_nifti_image.html | 130 +++- RNifti-0.9.0/RNifti/inst/doxygen/html/classes.html | 9 RNifti-0.9.0/RNifti/inst/doxygen/html/functions.html | 9 RNifti-0.9.0/RNifti/inst/doxygen/html/functions_func.html | 9 RNifti-0.9.0/RNifti/inst/doxygen/html/search/all_1.js | 2 RNifti-0.9.0/RNifti/inst/doxygen/html/search/all_4.js | 2 RNifti-0.9.0/RNifti/inst/doxygen/html/search/all_d.js | 1 RNifti-0.9.0/RNifti/inst/doxygen/html/search/all_e.js | 1 RNifti-0.9.0/RNifti/inst/doxygen/html/search/classes_2.html |only RNifti-0.9.0/RNifti/inst/doxygen/html/search/classes_2.js |only RNifti-0.9.0/RNifti/inst/doxygen/html/search/functions_1.js | 2 RNifti-0.9.0/RNifti/inst/doxygen/html/search/functions_4.js | 2 RNifti-0.9.0/RNifti/inst/doxygen/html/search/functions_e.js | 1 RNifti-0.9.0/RNifti/inst/doxygen/html/search/searchdata.js | 2 RNifti-0.9.0/RNifti/inst/doxygen/html/struct_r_nifti_1_1_nifti_image_1_1_block-members.html | 2 RNifti-0.9.0/RNifti/inst/doxygen/html/struct_r_nifti_1_1_nifti_image_1_1_block.html | 46 + RNifti-0.9.0/RNifti/inst/doxygen/html/struct_r_nifti_1_1internal_1_1vec3-members.html |only RNifti-0.9.0/RNifti/inst/doxygen/html/struct_r_nifti_1_1internal_1_1vec3.html |only RNifti-0.9.0/RNifti/inst/include/lib/NiftiImage.h | 281 ++++++-- RNifti-0.9.0/RNifti/inst/include/lib/NiftiImage_internal.h | 218 +++++- RNifti-0.9.0/RNifti/man/indexing.Rd |only RNifti-0.9.0/RNifti/man/niftiHeader.Rd |only RNifti-0.9.0/RNifti/man/niftiVersion.Rd | 2 RNifti-0.9.0/RNifti/man/readNifti.Rd | 6 RNifti-0.9.0/RNifti/man/retrieveNifti.Rd | 2 RNifti-0.9.0/RNifti/man/updateNifti.Rd | 6 RNifti-0.9.0/RNifti/man/voxelToWorld.Rd | 3 RNifti-0.9.0/RNifti/man/xform.Rd | 33 - RNifti-0.9.0/RNifti/src/main.cpp | 314 ++++++++-- RNifti-0.9.0/RNifti/src/niftilib/nifti1_io.c | 2 RNifti-0.9.0/RNifti/tests/testthat/test-05-nifti.R | 42 - RNifti-0.9.0/RNifti/tests/testthat/test-10-xform.R | 42 + RNifti-0.9.0/RNifti/tests/testthat/test-15-foreign.R | 7 46 files changed, 1299 insertions(+), 409 deletions(-)
Title: Kidney Functions: Clinical and Epidemiological
Description: Contains kidney care oriented functions.
Current version contains only function for calculation of Kidney Donor Risk Index and Kidney Donor Profile Index for kidney transplant donors by Rao et al. (2009) <doi:10.1097/TP.0b013e3181ac620b>.
Citation: Bikbov B. R open source programming code for calculation of the Kidney Donor Profile Index and Kidney Donor Risk Index. Kidney Diseases (2018) <doi:10.1159/000492427>.
Author: Boris Bikbov [aut, cre] (<https://orcid.org/0000-0002-1925-7506>)
Maintainer: Boris Bikbov <boris@bikbov.ru>
Diff between kidney.epi versions 1.0.0 dated 2018-06-19 and 1.1.0 dated 2018-09-10
DESCRIPTION | 7 MD5 | 25 +- NAMESPACE | 6 NEWS | 7 R/ktx.kdpi.optn.R | 228 +++++++++++++++++--- R/service.R |only R/sysdata.rda |binary README.md | 21 + inst/doc/ktx.html | 10 man/ktx.kdpi.optn.Rd | 46 ++-- man/service.count_greater_threshhold.Rd |only man/service.count_lowerequal_threshhold.Rd |only man/service.is.param_possible.Rd |only man/service.is_numeric.Rd |only man/service.kdpi.optn.output_message.Rd |only man/service.singular_or_plural.Rd |only man/service.strict_to_numeric_threshhold_greater.Rd |only man/service.strict_to_numeric_threshhold_lower.Rd |only 18 files changed, 277 insertions(+), 73 deletions(-)
Title: k-Prototypes Clustering for Mixed Variable-Type Data
Description: Functions to perform k-prototypes partitioning clustering for
mixed variable-type data according to Z.Huang (1998): Extensions to the k-Means
Algorithm for Clustering Large Data Sets with Categorical Variables, Data Mining
and Knowledge Discovery 2, 283-304, <DOI:10.1023/A:1009769707641>.
Author: Gero Szepannek
Maintainer: Gero Szepannek <gero.szepannek@web.de>
Diff between clustMixType versions 0.1-29 dated 2017-10-17 and 0.1-36 dated 2018-09-10
clustMixType-0.1-29/clustMixType/man/summary.kproto.Rd |only clustMixType-0.1-36/clustMixType/DESCRIPTION | 11 clustMixType-0.1-36/clustMixType/MD5 | 16 - clustMixType-0.1-36/clustMixType/R/kprototypes.R | 201 ++++++++++------- clustMixType-0.1-36/clustMixType/man/clprofiles.Rd | 11 clustMixType-0.1-36/clustMixType/man/kproto.Rd | 40 ++- clustMixType-0.1-36/clustMixType/man/lambdaest.Rd | 11 clustMixType-0.1-36/clustMixType/man/predict.kproto.Rd | 15 - clustMixType-0.1-36/clustMixType/man/summary.Rd |only clustMixType-0.1-36/clustMixType/tests |only 10 files changed, 173 insertions(+), 132 deletions(-)
Title: Request Data from the U.S. Bureau of Labor Statistics API
Description: Allows users to request data for one or multiple series through the
U.S. Bureau of Labor Statistics API. Users provide parameters as specified in
<https://www.bls.gov/developers/api_signature.htm> and the function returns a JSON
string.
Author: Michael Silva <mike.a.silva@gmail.com>
Maintainer: Michael Silva <mike.a.silva@gmail.com>
Diff between blsAPI versions 0.1.9 dated 2017-08-07 and 0.2.0 dated 2018-09-10
DESCRIPTION | 8 - MD5 | 12 +- NAMESPACE | 14 +- R/blsAPI.R | 273 ++++++++++++++++++++++++++++++--------------------------- R/blsQCEW.R | 141 ++++++++++++++--------------- man/blsAPI.Rd | 144 +++++++++++++++--------------- man/blsQCEW.Rd | 126 +++++++++++++------------- 7 files changed, 364 insertions(+), 354 deletions(-)
Title: Movement Data Visualization
Description: Tools to visualize movement data (e.g. from GPS tracking) and temporal changes of environmental data (e.g. from remote sensing) by creating video animations.
Author: Jakob Schwalb-Willmann [aut, cre]
Maintainer: Jakob Schwalb-Willmann <movevis@schwalb-willmann.de>
Diff between moveVis versions 0.9.6 dated 2017-11-03 and 0.9.7 dated 2018-09-10
moveVis-0.9.6/moveVis/NEWS |only moveVis-0.9.7/moveVis/DESCRIPTION | 18 ++- moveVis-0.9.7/moveVis/MD5 | 33 ++++--- moveVis-0.9.7/moveVis/NAMESPACE | 3 moveVis-0.9.7/moveVis/NEWS.md |only moveVis-0.9.7/moveVis/R/animate_move.R | 131 ++++++++++++---------------- moveVis-0.9.7/moveVis/R/animate_raster.R | 17 --- moveVis-0.9.7/moveVis/R/animate_stats.R | 7 - moveVis-0.9.7/moveVis/R/get_formats.R | 47 ++++------ moveVis-0.9.7/moveVis/R/get_libraries.R | 120 ++++--------------------- moveVis-0.9.7/moveVis/R/moveVis-internal.R | 53 ++++++++++- moveVis-0.9.7/moveVis/README.md | 59 ++++++++++-- moveVis-0.9.7/moveVis/man/animate_move.Rd | 20 ++-- moveVis-0.9.7/moveVis/man/animate_raster.Rd | 64 ------------- moveVis-0.9.7/moveVis/man/animate_stats.Rd | 4 moveVis-0.9.7/moveVis/man/get_libraries.Rd | 27 ++--- moveVis-0.9.7/moveVis/tests |only 17 files changed, 269 insertions(+), 334 deletions(-)
Title: Spatial Generalised Linear Mixed Models for Areal Unit Data
Description: Implements a class of univariate and multivariate spatial generalised linear mixed models for areal unit data, with inference in a Bayesian setting using Markov chain Monte Carlo (MCMC) simulation. The response variable can be binomial, Gaussian, multinomial, Poisson or zero-inflated Poisson (ZIP), and spatial autocorrelation is modelled by a set of random effects that are assigned a conditional autoregressive (CAR) prior distribution. A number of different models are available for univariate spatial data, including models with no random effects as well as random effects modelled by different types of CAR prior, including the BYM model (Besag et al. (1991) <doi:10.1007/BF00116466>), the Leroux model (Leroux et al. (2000) <doi:10.1007/978-1-4612-1284-3_4>) and the localised model (Lee et al. (2015) <doi:10.1002/env.2348>). Additionally, a multivariate CAR (MCAR) model for multivariate spatial data is available, as is a two-level hierarchical model for modelling data relating to individuals within areas. Full details are given in the vignette accompanying this package. The initial creation of this package was supported by the Economic and Social Research Council (ESRC) grant RES-000-22-4256, and on-going development has been supported by the Engineering and Physical Science Research Council (EPSRC) grant EP/J017442/1, ESRC grant ES/K006460/1, Innovate UK / Natural Environment Research Council (NERC) grant NE/N007352/1 and the TB Alliance.
Author: Duncan Lee
Maintainer: Duncan Lee <Duncan.Lee@glasgow.ac.uk>
Diff between CARBayes versions 5.0 dated 2017-06-01 and 5.1 dated 2018-09-10
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Title: Tokenization, Parts of Speech Tagging, Lemmatization and
Dependency Parsing with the 'UDPipe' 'NLP' Toolkit
Description: This natural language processing toolkit provides language-agnostic
'tokenization', 'parts of speech tagging', 'lemmatization' and 'dependency
parsing' of raw text. Next to text parsing, the package also allows you to train
annotation models based on data of 'treebanks' in 'CoNLL-U' format as provided
at <http://universaldependencies.org/format.html>. The techniques are explained
in detail in the paper: 'Tokenizing, POS Tagging, Lemmatizing and Parsing UD 2.0
with UDPipe', available at <doi:10.18653/v1/K17-3009>.
Author: Jan Wijffels [aut, cre, cph],
BNOSAC [cph],
Institute of Formal and Applied Linguistics, Faculty of Mathematics and
Physics, Charles University in Prague, Czech Republic [cph],
Milan Straka [ctb, cph],
Jana Straková [ctb, cph]
Maintainer: Jan Wijffels <jwijffels@bnosac.be>
Diff between udpipe versions 0.6.1 dated 2018-07-30 and 0.7 dated 2018-09-10
DESCRIPTION | 6 MD5 | 45 ++-- NAMESPACE | 5 NEWS.md | 8 R/pkg.R | 3 R/udpipe_models.R | 40 ++-- R/udpipe_parse.R | 170 +++++++++++++++++- R/udpipe_reconstruct.R |only R/utils.R | 102 ++++++++++ README.md | 33 +-- build/vignette.rds |binary inst/doc/udpipe-annotation.html | 6 inst/doc/udpipe-train.html | 6 inst/doc/udpipe-tryitout.R | 10 - inst/doc/udpipe-tryitout.Rmd | 12 + inst/doc/udpipe-tryitout.html | 32 ++- inst/doc/udpipe-usecase-postagging-lemmatisation.html | 4 inst/doc/udpipe-usecase-topicmodelling.html | 4 man/as.data.frame.udpipe_connlu.Rd | 5 man/txt_tagsequence.Rd |only man/udpipe.Rd |only man/udpipe_annotate.Rd | 4 man/udpipe_download_model.Rd | 25 +- man/udpipe_load_model.Rd | 2 vignettes/udpipe-tryitout.Rmd | 12 + 25 files changed, 436 insertions(+), 98 deletions(-)
Title: Statistical Methods for Interval Censored Data
Description: Functions that provide statistical methods for interval censored (grouped) data. The package supports the estimation of linear and linear mixed regression models with interval censored dependent variables. Parameter estimates are obtained by a stochastic expectation maximization algorithm. Furthermore, the package enables the direct (without covariates) estimation of statistical indicators from interval censored data via an iterative kernel density algorithm. Survey and Organisation for Economic Co-operation and Development (OECD) weights can be included into the direct estimation (see, Groß, M., U. Rendtel, T. Schmid, S. Schmon, and N. Tzavidis (2017) <doi:10.1111/rssa.12179>).
Author: Paul Walter
Maintainer: Paul Walter <paul.walter@fu-berlin.de>
Diff between smicd versions 1.0.1 dated 2018-06-20 and 1.0.2 dated 2018-09-10
DESCRIPTION | 9 +++++---- MD5 | 43 ++++++++++++++++++++++++------------------- NEWS.md |only R/ICD.R | 27 +++++++++++++++------------ R/dclassICD.R | 18 ++++++------------ R/kde.algo.R | 17 ++++++++--------- R/kdeAlgoObject.R | 10 +++++++--- R/plot.kdeAlgo.R | 4 ++-- R/plot.sem.R | 4 ++-- R/sem.lm.R | 6 +++--- R/sem.lme.R | 21 +++++++++++++-------- R/semObject.R | 27 +++++++++++++-------------- R/standardError.est.R | 4 ++-- build |only inst |only man/kdeAlgo.Rd | 18 ++++++++---------- man/kdeAlgoObject.Rd | 10 +++++++--- man/plot.kdeAlgo.Rd | 4 ++-- man/plot.sem.Rd | 4 ++-- man/semLm.Rd | 6 +++--- man/semLme.Rd | 10 +++++----- man/semObject.Rd | 27 +++++++++++++-------------- man/smicd.Rd | 27 +++++++++++++++------------ vignettes |only 24 files changed, 155 insertions(+), 141 deletions(-)
Title: Domain-Specific Language for Building PLS Structural Equation
Models
Description: A powerful, easy to write and easy to modify syntax for
specifying and estimating Partial Least Squares (PLS) path models allowing for the latest estimation methods
for Consistent PLS as per Dijkstra & Henseler (2015, MISQ 39(2): 297-316), adjusted interactions as per
Henseler & Chin (2010) <doi:10.1080/10705510903439003> and bootstrapping utilizing
parallel processing as per Hair et al. (2017, ISBN:978-1483377445).
Author: Soumya Ray [aut, ths],
Nicholas Danks [aut, cre],
Juan Manuel Velasquez Estrada [aut]
Maintainer: Nicholas Danks <nicholasdanks@hotmail.com>
Diff between seminr versions 0.5.0 dated 2018-06-26 and 0.5.1 dated 2018-09-10
DESCRIPTION | 6 +++--- MD5 | 6 +++--- inst/doc/SEMinR.html | 18 +++++++++--------- tests/testthat/test-summary.R | 10 +++++----- 4 files changed, 20 insertions(+), 20 deletions(-)
Title: Population (and Individual) Optimal Experimental Design
Description: Optimal experimental designs for both population and individual
studies based on nonlinear mixed-effect models. Often this is based on a
computation of the Fisher Information Matrix. This package was developed
for pharmacometric problems, and examples and predefined models are available
for these types of systems. The methods are described in Nyberg et al.
(2012) <doi:10.1016/j.cmpb.2012.05.005>, and Foracchia et al. (2004)
<doi:10.1016/S0169-2607(03)00073-7>.
Author: Andrew C. Hooker [aut, cre, trl, cph],
Marco Foracchia [aut] (O-Matrix version),
Eric Stroemberg [ctb] (MATLAB version),
Martin Fink [ctb] (Streamlining code, added functionality, vignettes),
Giulia Lestini [ctb] (Streamlining code, added functionality,
vignettes),
Sebastian Ueckert [aut] (MATLAB version),
Joakim Nyberg [aut] (MATLAB version)
Maintainer: Andrew C. Hooker <andrew.hooker@farmbio.uu.se>
Diff between PopED versions 0.3.2 dated 2016-12-12 and 0.4.0 dated 2018-09-10
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PopED-0.4.0/PopED/man/mc_mean.Rd | 3 PopED-0.4.0/PopED/man/median_hilow_poped.Rd | 1 PopED-0.4.0/PopED/man/mf3.Rd | 85 - PopED-0.4.0/PopED/man/mf7.Rd | 81 - PopED-0.4.0/PopED/man/mfea.Rd | 34 PopED-0.4.0/PopED/man/mftot.Rd | 23 PopED-0.4.0/PopED/man/model_prediction.Rd | 10 PopED-0.4.0/PopED/man/ofv_criterion.Rd | 18 PopED-0.4.0/PopED/man/ofv_fim.Rd | 27 PopED-0.4.0/PopED/man/ones.Rd | 5 PopED-0.4.0/PopED/man/optim_ARS.Rd | 21 PopED-0.4.0/PopED/man/optim_LS.Rd | 15 PopED-0.4.0/PopED/man/pargen.Rd | 7 PopED-0.4.0/PopED/man/plot_efficiency_of_windows.Rd | 24 PopED-0.4.0/PopED/man/plot_model_prediction.Rd | 127 + PopED-0.4.0/PopED/man/poped.choose.Rd | 2 PopED-0.4.0/PopED/man/poped_gui.Rd | 1 PopED-0.4.0/PopED/man/poped_optim.Rd | 80 - PopED-0.4.0/PopED/man/poped_optim_1.Rd |only PopED-0.4.0/PopED/man/poped_optim_2.Rd |only PopED-0.4.0/PopED/man/poped_optim_3.Rd |only PopED-0.4.0/PopED/man/poped_optimize.Rd | 54 PopED-0.4.0/PopED/man/rand.Rd | 5 PopED-0.4.0/PopED/man/randn.Rd | 5 PopED-0.4.0/PopED/man/shrinkage.Rd |only PopED-0.4.0/PopED/man/size.Rd | 5 PopED-0.4.0/PopED/man/start_parallel.Rd | 5 PopED-0.4.0/PopED/man/summary.poped_optim.Rd | 7 PopED-0.4.0/PopED/man/test_mat_size.Rd | 1 PopED-0.4.0/PopED/man/tic.Rd | 7 PopED-0.4.0/PopED/man/toc.Rd | 7 PopED-0.4.0/PopED/man/zeros.Rd | 5 PopED-0.4.0/PopED/tests/testthat/PopED_output_summary_D_cont_opt_1.txt | 167 +- PopED-0.4.0/PopED/tests/testthat/PopED_output_summary_RS.txt | 65 PopED-0.4.0/PopED/tests/testthat/PopED_output_summary_mfea_opt_1.txt | 57 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_RS_opt.R | 20 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_blockfinal.R | 2 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_evaluate.fim.R | 5 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_evaluate_power.R |only PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_feps.add.R | 6 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_ff.PK.1.comp.oral.md.CL.R | 6 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_ff.PK.1.comp.oral.md.KE.R | 6 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_ff.PK.1.comp.oral.sd.KE.R | 6 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_ff.PKPD.1.comp.oral.md.CL.imax.R | 6 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_ff.PKPD.1.comp.sd.CL.emax.R | 6 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_optim_ARS.R | 2 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_plot_efficiency_of_windows.R | 7 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_plot_model_prediction.R | 84 + PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_poped-package.R | 12 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_poped_optim.R | 9 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_poped_optimize.R | 1 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/examples_shrinkage.R |only PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/warfarin_basic.R | 6 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/warfarin_ed.R | 6 PopED-0.4.0/PopED/tests/testthat/examples_fcn_doc/warfarin_optimize.R | 6 PopED-0.4.0/PopED/tests/testthat/helper_options.R | 2 PopED-0.4.0/PopED/tests/testthat/test_create_databases.R | 19 PopED-0.4.0/PopED/tests/testthat/test_distributions.R | 56 PopED-0.4.0/PopED/tests/testthat/test_evaluate.fim.R | 131 + PopED-0.4.0/PopED/tests/testthat/test_evaluate_design.R | 221 ++ PopED-0.4.0/PopED/tests/testthat/test_examples.R | 12 PopED-0.4.0/PopED/tests/testthat/test_misc.R |only PopED-0.4.0/PopED/tests/testthat/test_optimization.R | 22 PopED-0.4.0/PopED/tests/testthat/test_pre_optimization.R |only PopED-0.4.0/PopED/tests/testthat/test_predictions.R | 1 PopED-0.4.0/PopED/vignettes/examples.Rmd |only PopED-0.4.0/PopED/vignettes/intro-poped.Rmd | 154 +- PopED-0.4.0/PopED/vignettes/run_vignettes.R |only 304 files changed, 3869 insertions(+), 3874 deletions(-)
Title: Interface for Loading Datasets
Description: Visual interface for loading datasets in RStudio from all installed (unloaded) packages.
Author: Bastiaan quast [aut, cre]
Maintainer: Bastiaan quast <bquast@gmail.com>
Diff between datasets.load versions 0.1.0 dated 2016-12-14 and 0.3.0 dated 2018-09-10
DESCRIPTION | 8 ++++---- MD5 | 26 +++++++++++++------------- R/datasets.load.R | 2 +- R/print.datasets.R | 1 - man/alldata.Rd | 1 - man/browseDatasets.Rd | 1 - man/datasets.Rd | 1 - man/datasets.load-package.Rd | 1 - man/datasets.load.Rd | 1 - man/getDatasetInfo.Rd | 1 - man/print.browseDatasets.Rd | 1 - man/print.datasets.Rd | 1 - man/printDatasets.Rd | 1 - man/promptDatasets.Rd | 1 - 14 files changed, 18 insertions(+), 29 deletions(-)
Title: Chandler-Bate Sandwich Loglikelihood Adjustment
Description: Performs adjustments of a user-supplied independence loglikelihood
function using a robust sandwich estimator of the parameter covariance
matrix, based on the methodology in Chandler and Bate (2007)
<doi:10.1093/biomet/asm015>. This can be used for cluster correlated data
when interest lies in the parameters of the marginal distributions or for
performing inferences that are robust to certain types of model
misspecification. Functions for profiling the adjusted loglikelihoods are
also provided, as are functions for calculating and plotting confidence
intervals, for single model parameters, and confidence regions, for pairs
of model parameters. Nested models can be compared using an adjusted
likelihood ratio test.
Author: Paul J. Northrop [aut, cre, cph],
Richard Chandler [aut, cph]
Maintainer: Paul J. Northrop <p.northrop@ucl.ac.uk>
Diff between chandwich versions 1.0.0 dated 2018-03-06 and 1.1.0 dated 2018-09-10
DESCRIPTION | 18 +- MD5 | 70 ++++++---- NAMESPACE | 7 + NEWS.md |only R/adjust_loglik.R | 121 ++++++++++++++++-- R/chandwich.R | 8 - R/compare_models.R | 192 +++++++++++++++++++++++++++--- R/confidence_intervals.R | 107 ++++++++++++++++ R/methods.R |only R/plot_summary_print.R | 65 ++++++++++ README.md | 2 build/vignette.rds |binary inst/doc/chandwich-vignette.R | 8 + inst/doc/chandwich-vignette.Rmd | 20 ++- inst/doc/chandwich-vignette.html | 104 ++++++++++------ man/adjust_loglik.Rd | 58 +++++++-- man/anova.chandwich.Rd |only man/chandwich.Rd | 8 - man/coef.chandwich.Rd |only man/compare_models.Rd | 18 +- man/conf_intervals.Rd | 9 + man/conf_region.Rd | 11 + man/confint.chandwich.Rd |only man/logLik.chandwich.Rd |only man/plot.confreg.Rd | 4 man/print.chandwich.Rd |only man/print.compmod.Rd | 3 man/print.confint.Rd | 3 man/print.summary.chandwich.Rd |only man/profile_loglik.Rd | 5 man/summary.chandwich.Rd | 6 man/vcov.chandwich.Rd |only tests/testthat/test-adjust_loglik.R | 18 ++ tests/testthat/test-compare_models.R | 88 ++++++++++++- tests/testthat/test-compare_to_sandwich.R | 86 +++++++++++-- tests/testthat/test-methods.R |only tests/testthat/test-plot_chandwich.R | 2 tests/testthat/test-plot_confint.R | 13 +- tests/testthat/test-print_confint.R | 33 ++--- tests/testthat/test-summary_chandwich.R | 2 vignettes/chandwich-vignette.Rmd | 20 ++- 41 files changed, 919 insertions(+), 190 deletions(-)
Title: Biochemically Intuitive Generalized Loewe Model
Description: Response surface methods for drug synergy analysis. Available
methods include generalized and classical Loewe formulations as well as Highest
Single Agent methodology. Response surfaces can be plotted in an interactive
3-D plot and formal statistical tests for presence of synergistic effects are
available. Implemented methods and tests are described in the article
"BIGL: Biochemically Intuitive Generalized Loewe null model for prediction
of the expected combined effect compatible with partial agonism and antagonism"
by Koen Van der Borght, Annelies Tourny, Rytis Bagdziunas, Olivier Thas,
Maxim Nazarov, Heather Turner, Bie Verbist & Hugo Ceulemans (2017)
<doi:10.1038/s41598-017-18068-5>.
Author: Heather Turner, Annelies Tourny, Olivier Thas, Maxim Nazarov, Rytis Bagdziunas
Maintainer: Maxim Nazarov <maxim.nazarov@openanalytics.eu>
Diff between BIGL versions 1.2.0 dated 2018-06-13 and 1.2.2 dated 2018-09-10
DESCRIPTION | 11 ++- MD5 | 36 ++++++------ R/ResponseSurface-methods.R | 17 +++-- R/statistics.R | 21 +++++-- build/vignette.rds |binary inst/NEWS | 6 +- inst/doc/analysis.html | 126 ++++++++++++++++++++---------------------- inst/doc/methodology.html | 4 - man/constructFormula.Rd | 6 +- man/fitMarginals.Rd | 5 + man/fitSurface.Rd | 9 +-- man/getTransformations.Rd | 3 - man/maxR.Rd | 6 +- man/meanR.Rd | 6 +- man/plot.ResponseSurface.Rd | 4 - man/plot.maxR.Rd | 4 - man/plotResponseSurface.Rd | 11 ++- tests/testthat/test_calls.R | 19 ++++++ tests/testthat/test_wrapper.R | 6 ++ 19 files changed, 170 insertions(+), 130 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-08-17 10.11.0
Title: Datasets and Functions Featured in Pollock and Edwards, An R
Companion to Essentials of Political Analysis, Second Edition
Description: Bundles the datasets and functions used in the textbook by Philip
Pollock and Barry Edwards, An R Companion to Essentials of Political Analysis,
Second Edition.
Author: Barry Edwards and Philip Pollock
Maintainer: Barry Edwards <barry.edwards@ucf.edu>
Diff between poliscidata versions 2.2.0 dated 2018-07-12 and 2.2.2 dated 2018-09-10
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- NEWS.md | 16 ++++++++++++++++ R/prop.testC.r | 3 +++ R/xtp.chi2.r | 2 +- 5 files changed, 28 insertions(+), 9 deletions(-)
Title: Support for Metrological Applications
Description: Provides classes and calculation and plotting functions
for metrology applications, including measurement uncertainty estimation
and inter-laboratory metrology comparison studies.
Author: Stephen L R Ellison <s.ellison@lgc.co.uk>.
Maintainer: Stephen L R Ellison <s.ellison@lgcgroup.com>
Diff between metRology versions 0.9-28-0 dated 2018-08-30 and 0.9-28-1 dated 2018-09-10
DESCRIPTION | 12 ++++++------ MD5 | 8 ++++---- R/blockplot.r | 2 +- build/partial.rdb |binary man/metRology-package.Rd | 7 ++++++- 5 files changed, 17 insertions(+), 12 deletions(-)
Title: R/Weka Interface Jars
Description: External jars required for package 'RWeka'.
Author: Kurt Hornik [aut, cre] (<https://orcid.org/0000-0003-4198-9911>),
University of Waikato [ctb, cph] (Weka Java library)
Maintainer: Kurt Hornik <Kurt.Hornik@R-project.org>
Diff between RWekajars versions 3.9.2-1 dated 2018-01-06 and 3.9.3-1 dated 2018-09-10
DESCRIPTION | 10 +++++----- MD5 | 6 +++--- configure | 12 ++++++------ inst/java/weka.jar |binary 4 files changed, 14 insertions(+), 14 deletions(-)
Title: R/Weka Interface
Description: An R interface to Weka (Version 3.9.3).
Weka is a collection of machine learning algorithms for data mining
tasks written in Java, containing tools for data pre-processing,
classification, regression, clustering, association rules, and
visualization. Package 'RWeka' contains the interface code, the
Weka jar is in a separate package 'RWekajars'. For more information
on Weka see <http://www.cs.waikato.ac.nz/ml/weka/>.
Author: Kurt Hornik [aut, cre] (<https://orcid.org/0000-0003-4198-9911>),
Christian Buchta [ctb],
Torsten Hothorn [ctb],
Alexandros Karatzoglou [ctb],
David Meyer [ctb],
Achim Zeileis [ctb] (<https://orcid.org/0000-0003-0918-3766>)
Maintainer: Kurt Hornik <Kurt.Hornik@R-project.org>
Diff between RWeka versions 0.4-38 dated 2018-05-27 and 0.4-39 dated 2018-09-10
CHANGELOG | 4 ++++ DESCRIPTION | 10 +++++----- MD5 | 11 ++++++----- build/vignette.rds |binary inst/doc/RWeka.pdf |binary java/RWeka.jar |only java/RWekaInterfaces.class |binary 7 files changed, 15 insertions(+), 10 deletions(-)
Title: Mixtures of von Mises-Fisher Distributions
Description: Fit and simulate mixtures of von Mises-Fisher distributions.
Author: Kurt Hornik [aut, cre] (<https://orcid.org/0000-0003-4198-9911>),
Bettina Grün [aut] (<https://orcid.org/0000-0001-7265-4773>)
Maintainer: Kurt Hornik <Kurt.Hornik@R-project.org>
Diff between movMF versions 0.2-2 dated 2017-11-03 and 0.2-3 dated 2018-09-10
DESCRIPTION | 16 ++++--- MD5 | 17 ++++---- R/movMF.R | 5 +- build/partial.rdb |only build/vignette.rds |binary inst/NEWS.Rd | 6 ++ inst/doc/movMF.pdf |binary man/movMF.Rd | 35 +++++++++-------- src/init.c | 2 vignettes/vMF.bib | 108 +++++++++++++++++++++++++++++++++++++++++------------ 10 files changed, 133 insertions(+), 56 deletions(-)
Title: Bootstrap Resampling for Mixed Effects and Plain Models
Description: Performs bootstrap resampling for most models that update() works for. There
are two main functions: BootGlmm() performs block resampling if random effects
are present, and case resampling if not; BootCI() converts output from
bootstrap model runs into confidence intervals and p-values. By default,
BootGlmm() calls BootCI().
Package motivated by Humphrey and Swingley (2018) <arXiv:1805.08670>.
Author: Colman Humphrey [aut, cre]
Maintainer: Colman Humphrey <humphrc@tcd.ie>
Diff between glmmboot versions 0.1.2 dated 2018-05-30 and 0.2.0 dated 2018-09-10
glmmboot-0.1.2/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-3_3e162ead482832c9eabe3fbc5dc0003a.RData |only glmmboot-0.1.2/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-3_3e162ead482832c9eabe3fbc5dc0003a.rdb |only glmmboot-0.1.2/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-3_3e162ead482832c9eabe3fbc5dc0003a.rdx |only glmmboot-0.1.2/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-5_4725c4ff4a01206d459f4a6202838a8d.RData |only glmmboot-0.1.2/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-5_4725c4ff4a01206d459f4a6202838a8d.rdb |only glmmboot-0.1.2/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-5_4725c4ff4a01206d459f4a6202838a8d.rdx |only glmmboot-0.2.0/glmmboot/DESCRIPTION | 8 - glmmboot-0.2.0/glmmboot/MD5 | 80 +++++----- glmmboot-0.2.0/glmmboot/NEWS.md | 11 + glmmboot-0.2.0/glmmboot/R/BootCI.R | 32 ++-- glmmboot-0.2.0/glmmboot/R/BootGlmm.R | 25 +-- glmmboot-0.2.0/glmmboot/build/vignette.rds |binary glmmboot-0.2.0/glmmboot/inst/doc/quick_use.R | 4 glmmboot-0.2.0/glmmboot/inst/doc/quick_use.Rmd | 11 + glmmboot-0.2.0/glmmboot/inst/doc/quick_use.html | 76 +++++---- glmmboot-0.2.0/glmmboot/man/BootCI.Rd | 10 - glmmboot-0.2.0/glmmboot/man/BootGlmm.Rd | 24 +-- glmmboot-0.2.0/glmmboot/man/CombineResampledLists.Rd | 12 - glmmboot-0.2.0/glmmboot/man/GenSample.Rd | 3 glmmboot-0.2.0/glmmboot/tests/testthat/test_BootCI.R | 18 +- glmmboot-0.2.0/glmmboot/tests/testthat/test_BootGlmm.R | 13 + glmmboot-0.2.0/glmmboot/vignettes/quick_use.Rmd | 11 + glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-10_92820b648a3ce75929e1d7124ef99da5.RData |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-10_92820b648a3ce75929e1d7124ef99da5.rdx |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-1_a248e942ab78307343c4503dcce2d851.RData |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-1_a248e942ab78307343c4503dcce2d851.rdb |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-1_a248e942ab78307343c4503dcce2d851.rdx |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-2_0e9fb2184a004c706571d8f393cfeb2a.RData |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-2_0e9fb2184a004c706571d8f393cfeb2a.rdb |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-2_0e9fb2184a004c706571d8f393cfeb2a.rdx |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-3_1f4811905561271dbb8b0303817f5d83.RData |only glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-3_1f4811905561271dbb8b0303817f5d83.rdb |only glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-3_1f4811905561271dbb8b0303817f5d83.rdx |only glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-4_d7eb272c64ed079abf5147c44f8aac2e.RData |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-4_d7eb272c64ed079abf5147c44f8aac2e.rdx |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-5_81b761b902d58f42beb055372f2f5f67.RData |only glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-5_81b761b902d58f42beb055372f2f5f67.rdb |only glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-5_81b761b902d58f42beb055372f2f5f67.rdx |only glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-6_f12ccd0aec27d7b05216010f556fcb2f.RData |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-6_f12ccd0aec27d7b05216010f556fcb2f.rdx |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-7_20e851cd905f2f0db583439f042efd42.RData |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-7_20e851cd905f2f0db583439f042efd42.rdb |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-7_20e851cd905f2f0db583439f042efd42.rdx |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-8_e501dcb13d1d321192b9eb891019adae.RData |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-8_e501dcb13d1d321192b9eb891019adae.rdx |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-9_759bdb725e839416860344dc1f200bf3.RData |binary glmmboot-0.2.0/glmmboot/vignettes/quick_use_cache/html/unnamed-chunk-9_759bdb725e839416860344dc1f200bf3.rdx |binary 47 files changed, 196 insertions(+), 142 deletions(-)
Title: Cluster Ensembles
Description: CLUster Ensembles.
Author: Kurt Hornik [aut, cre] (<https://orcid.org/0000-0003-4198-9911>),
Walter Böhm [ctb]
Maintainer: Kurt Hornik <Kurt.Hornik@R-project.org>
Diff between clue versions 0.3-55 dated 2018-04-23 and 0.3-56 dated 2018-09-10
DESCRIPTION | 6 +++--- MD5 | 24 ++++++++++++------------ build/partial.rdb |binary build/vignette.rds |binary data/CKME.rda |binary data/Cassini.rda |binary data/GVME.rda |binary data/GVME_Consensus.rda |binary data/Kinship82.rda |binary data/Kinship82_Consensus.rda |binary data/Phonemes.rda |binary inst/doc/clue.pdf |binary src/init.c | 2 +- 13 files changed, 16 insertions(+), 16 deletions(-)