Title: Delineate Region of Interests (ROI's) and Extract Time-Series
Data from Digital Repeat Photography Images
Description: Digital repeat photography and near-surface remote sensing have been used by environmental scientists to study the environmental change for nearly a decade. However, a user-friendly, reliable, and robust platform to extract color-based statistics and time-series from a large stack of images is still lacking. Here, we present an interactive open-source toolkit, called 'xROI', that facilitate the process time-series extraction and improve the quality of the final data. 'xROI' provides a responsive environment for scientists to interactively a) delineate regions of interest (ROI), b) handle field of view (FOV) shifts, and c) extract and export time series data characterizing image color (i.e. red, green and blue channel digital numbers for the defined ROI). Using 'xROI', user can detect FOV shifts without minimal difficulty. The software gives user the opportunity to readjust the mask files or redraw new ones every time an FOV shift occurs. 'xROI' helps to significantly improve data accuracy and continuity.
Author: Bijan Seyednasrollah, Thomas Milliman, Andrew D. Richardson
Maintainer: Bijan Seyednasrollah <bijan.s.nasr@gmail.com>
Diff between xROI versions 0.1.2 dated 2018-04-11 and 0.9.9 dated 2018-09-28
xROI-0.1.2/xROI/LICENSE |only xROI-0.9.9/xROI/DESCRIPTION | 14 +-- xROI-0.9.9/xROI/MD5 | 23 +++-- xROI-0.9.9/xROI/NAMESPACE | 5 + xROI-0.9.9/xROI/NEWS.md |only xROI-0.9.9/xROI/R/getServer.R | 113 ++++++++++++++++---------- xROI-0.9.9/xROI/R/getUI.R | 3 xROI-0.9.9/xROI/R/parsePhenocamFilenames.R |only xROI-0.9.9/xROI/build |only xROI-0.9.9/xROI/inst/CITATION | 4 xROI-0.9.9/xROI/inst/doc |only xROI-0.9.9/xROI/man/getServer.Rd | 5 - xROI-0.9.9/xROI/man/getUI.Rd | 4 xROI-0.9.9/xROI/man/parsePhenocamFilenames.Rd |only xROI-0.9.9/xROI/vignettes |only 15 files changed, 101 insertions(+), 70 deletions(-)
Title: Take Screenshots of Web Pages
Description: Takes screenshots of web pages, including Shiny applications and R
Markdown documents.
Author: Winston Chang [aut, cre],
Yihui Xie [ctb],
Francois Guillem [ctb],
Barret Schloerke [ctb],
Nicolas Perriault [ctb] (The CasperJS library)
Maintainer: Winston Chang <winston@rstudio.com>
Diff between webshot versions 0.5.0 dated 2017-11-29 and 0.5.1 dated 2018-09-28
webshot-0.5.0/webshot/build |only webshot-0.5.0/webshot/inst/doc |only webshot-0.5.0/webshot/vignettes |only webshot-0.5.1/webshot/DESCRIPTION | 14 ++- webshot-0.5.1/webshot/MD5 | 32 +++----- webshot-0.5.1/webshot/NEWS.md | 9 ++ webshot-0.5.1/webshot/R/appshot.R | 129 ++++++++++++++++++++++++++++++---- webshot-0.5.1/webshot/R/process.R |only webshot-0.5.1/webshot/R/rmdshot.R | 66 ++++++----------- webshot-0.5.1/webshot/R/utils.R | 24 ++++++ webshot-0.5.1/webshot/R/wait.R |only webshot-0.5.1/webshot/R/webshot.R | 31 +++++++- webshot-0.5.1/webshot/R/zzz.R | 55 ++++++-------- webshot-0.5.1/webshot/README.md | 108 ++++++++++++++++++++-------- webshot-0.5.1/webshot/inst/examples |only webshot-0.5.1/webshot/inst/webshot.js | 18 ++++ webshot-0.5.1/webshot/man/appshot.Rd | 32 ++++++++ webshot-0.5.1/webshot/man/rmdshot.Rd | 14 ++- webshot-0.5.1/webshot/man/webshot.Rd | 20 ++++- 19 files changed, 398 insertions(+), 154 deletions(-)
Title: Additional Operators to Help you Write Cleaner R Code
Description: Provides string arithmetic, reassignment operators, logical operators that handle missing values, and extra logical operators such as floating point equality and all or nothing. The intent is to allow R users to write code that is easier to read, write, and maintain while providing a friendlier experience to new R users from other language backgrounds (such as 'Python') who are used to concepts such as x += 1 and 'foo' + 'bar'.
Author: Ben Wiseman [cre, aut, ccp],
Steven Nydick [aut, ccp],
Jeff Jones [aut, led]
Maintainer: Ben Wiseman <benjamin.wiseman@kornferry.com>
Diff between roperators versions 1.0.1 dated 2018-08-24 and 1.1.0 dated 2018-09-28
roperators-1.0.1/roperators/man/na_equal.Rd |only roperators-1.1.0/roperators/DESCRIPTION | 9 roperators-1.1.0/roperators/MD5 | 30 roperators-1.1.0/roperators/R/operators.R | 325 ++++++---- roperators-1.1.0/roperators/R/shorthand.R | 5 roperators-1.1.0/roperators/README.md |only roperators-1.1.0/roperators/build |only roperators-1.1.0/roperators/inst |only roperators-1.1.0/roperators/man/assign_by_regex.Rd | 6 roperators-1.1.0/roperators/man/assign_ops.Rd | 28 roperators-1.1.0/roperators/man/comparisons.Rd |only roperators-1.1.0/roperators/man/factor_conversion.Rd | 4 roperators-1.1.0/roperators/man/floating_point_comparisons.Rd |only roperators-1.1.0/roperators/man/logicals.Rd | 50 - roperators-1.1.0/roperators/man/overwrite_by_regex.Rd | 9 roperators-1.1.0/roperators/man/overwrite_missing.Rd | 3 roperators-1.1.0/roperators/man/string_arithmetic.Rd | 14 roperators-1.1.0/roperators/vignettes |only 18 files changed, 291 insertions(+), 192 deletions(-)
Title: Interactive Grammar of Graphics
Description: An implementation of an interactive grammar of graphics, taking the
best parts of 'ggplot2', combining them with the reactive framework of
'shiny' and drawing web graphics using 'vega'.
Author: Winston Chang [aut, cre],
Hadley Wickham [aut],
RStudio [cph],
jQuery Foundation [cph] (jQuery library and jQuery UI library),
jQuery contributors [ctb, cph] (jQuery library; authors listed in
inst/www/lib/jquery/AUTHORS.txt),
jQuery UI contributors [ctb, cph] (jQuery UI library; authors listed in
inst/www/lib/jquery-ui/AUTHORS.txt),
Mike Bostock [ctb, cph] (D3 library),
D3 contributors [ctb] (D3 library; authors listed at
https://github.com/mbostock/d3/graphs/contributors),
Trifacta Inc. [cph] (Vega library),
Vega contributors [ctb] (Vega library; authors listed at
https://github.com/trifacta/vega/graphs/contributors),
Sebastián Décima [ctb, cph] (javascript-detect-element-resize library)
Maintainer: Winston Chang <winston@rstudio.com>
Diff between ggvis versions 0.4.3 dated 2016-07-22 and 0.4.4 dated 2018-09-28
DESCRIPTION | 8 - MD5 | 204 ++++++++++++++++++------------------- NAMESPACE | 64 ++++++----- NEWS.md | 4 R/data_cocaine.R | 2 R/dplyr.R | 12 ++ R/ggvis_html.R | 3 R/print.R | 3 R/zzz.r | 31 +++++ README.md | 10 + man/add_axis.Rd | 2 man/add_data.Rd | 4 man/add_guide_axis.Rd | 1 man/add_guide_legend.Rd | 1 man/add_legend.Rd | 2 man/add_props.Rd | 4 man/add_relative_scales.Rd | 1 man/add_scale.Rd | 1 man/add_tooltip.Rd | 1 man/as.vega.Rd | 1 man/auto_group.Rd | 1 man/axis_props.Rd | 1 man/band.Rd | 1 man/bin_vector.Rd | 1 man/cocaine.Rd | 5 man/compute_align.Rd | 1 man/compute_bin.Rd | 4 man/compute_boxplot.Rd | 1 man/compute_count.Rd | 1 man/compute_density.Rd | 5 man/compute_model_prediction.Rd | 1 man/compute_stack.Rd | 1 man/compute_tabulate.Rd | 1 man/create_broker.Rd | 1 man/create_input.Rd | 1 man/default_options.Rd | 1 man/dplyr-ggvis.Rd | 86 +++++++-------- man/explain.Rd | 1 man/explain.ggvis.Rd | 1 man/export_png.Rd | 1 man/fullseq.Rd | 1 man/get_data.Rd | 1 man/ggvis.Rd | 1 man/ggvisControlOutput.Rd | 1 man/ggvisOutputElements.Rd | 1 man/ggvis_message.Rd | 1 man/ggvis_scale.Rd | 1 man/group_by.Rd | 1 man/handle_brush.Rd | 1 man/handle_click.Rd | 1 man/handle_resize.Rd | 3 man/input_checkbox.Rd | 2 man/input_select.Rd | 13 +- man/input_slider.Rd | 10 - man/input_text.Rd | 7 - man/is.axis_props.Rd | 1 man/is.broker.Rd | 1 man/is.dynamic.Rd | 1 man/is.ggvis.Rd | 1 man/is.legend_props.Rd | 1 man/is.scaled_value.Rd | 1 man/knit_print.ggvis.Rd | 1 man/layer_bars.Rd | 2 man/layer_boxplots.Rd | 1 man/layer_densities.Rd | 1 man/layer_f.Rd | 1 man/layer_guess.Rd | 2 man/layer_histograms.Rd | 12 +- man/layer_lines.Rd | 1 man/layer_model_predictions.Rd | 5 man/left_right.Rd | 1 man/legend_props.Rd | 1 man/linked_brush.Rd | 1 man/mark.Rd | 3 man/marks.Rd | 20 +-- man/new_prop.Rd | 1 man/padding.Rd | 1 man/pipe.Rd | 1 man/print.ggvis.Rd | 6 - man/prop.Rd | 5 man/prop_domain.Rd | 1 man/propname_to_scale.Rd | 1 man/props.Rd | 4 man/resolution.Rd | 1 man/save_spec.Rd | 1 man/scale_datetime.Rd | 9 - man/scale_numeric.Rd | 10 - man/scale_ordinal.Rd | 28 ++--- man/scaled_value.Rd | 1 man/scales.Rd | 2 man/scaletype_to_vega_scaletype.Rd | 1 man/set_options.Rd | 5 man/set_scale_label.Rd | 1 man/shiny-ggvis.Rd | 7 - man/show_spec.Rd | 1 man/show_tooltip.Rd | 3 man/sidebarBottomPage.Rd | 3 man/singular.Rd | 3 man/subvis.Rd | 1 man/vector_type.Rd | 1 man/vega_data_parser.Rd | 1 man/waggle.Rd | 4 man/zero_range.Rd | 1 103 files changed, 338 insertions(+), 344 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-02-12 1.0
Title: Collecting Twitter Data
Description: An implementation of calls designed to collect and
organize Twitter data via Twitter's REST and stream Application
Program Interfaces (API), which can be found at the following URL:
<https://developer.twitter.com/en/docs>.
Author: Michael W. Kearney [aut, cre] (<https://orcid.org/0000-0002-0730-4694>)
Maintainer: Michael W. Kearney <kearneymw@missouri.edu>
Diff between rtweet versions 0.6.7 dated 2018-06-20 and 0.6.8 dated 2018-09-28
rtweet-0.6.7/rtweet/inst/assets/index.html |only rtweet-0.6.8/rtweet/DESCRIPTION | 12 rtweet-0.6.8/rtweet/MD5 | 112 +++--- rtweet-0.6.8/rtweet/NAMESPACE | 17 + rtweet-0.6.8/rtweet/NEWS.md |only rtweet-0.6.8/rtweet/R/access_level.R |only rtweet-0.6.8/rtweet/R/collections.R | 2 rtweet-0.6.8/rtweet/R/coords.R | 13 rtweet-0.6.8/rtweet/R/direct_messages.R | 14 rtweet-0.6.8/rtweet/R/favorites.R | 2 rtweet-0.6.8/rtweet/R/friends.R | 13 rtweet-0.6.8/rtweet/R/join_rtweet.R | 2 rtweet-0.6.8/rtweet/R/lat_lng.R | 2 rtweet-0.6.8/rtweet/R/lists_members.R | 8 rtweet-0.6.8/rtweet/R/lists_memberships.R | 52 +-- rtweet-0.6.8/rtweet/R/mentions.R | 8 rtweet-0.6.8/rtweet/R/next_cursor.R | 234 ++++++++++++-- rtweet-0.6.8/rtweet/R/post.R | 91 +++++ rtweet-0.6.8/rtweet/R/rate_limit.R | 2 rtweet-0.6.8/rtweet/R/search_tweets.R | 5 rtweet-0.6.8/rtweet/R/statuses.R | 5 rtweet-0.6.8/rtweet/R/stream.R | 100 ++++- rtweet-0.6.8/rtweet/R/suggested.R | 3 rtweet-0.6.8/rtweet/R/sysdata.rda |binary rtweet-0.6.8/rtweet/R/tokens.R | 34 +- rtweet-0.6.8/rtweet/R/trends.R | 4 rtweet-0.6.8/rtweet/R/ts_plot.R | 14 rtweet-0.6.8/rtweet/R/users.R | 9 rtweet-0.6.8/rtweet/R/utils.R | 29 + rtweet-0.6.8/rtweet/README.md | 23 - rtweet-0.6.8/rtweet/build/vignette.rds |binary rtweet-0.6.8/rtweet/inst/assets/pkgdown.css | 58 +-- rtweet-0.6.8/rtweet/inst/doc/FAQ.R | 35 +- rtweet-0.6.8/rtweet/inst/doc/FAQ.Rmd | 23 - rtweet-0.6.8/rtweet/inst/doc/FAQ.html | 28 - rtweet-0.6.8/rtweet/inst/doc/auth.R | 11 rtweet-0.6.8/rtweet/inst/doc/auth.Rmd | 16 rtweet-0.6.8/rtweet/inst/doc/auth.html | 42 -- rtweet-0.6.8/rtweet/inst/doc/intro.html | 64 +-- rtweet-0.6.8/rtweet/inst/doc/stream.html | 48 +- rtweet-0.6.8/rtweet/man/direct_messages.Rd | 9 rtweet-0.6.8/rtweet/man/figures/logo.png |binary rtweet-0.6.8/rtweet/man/get_timeline.Rd | 8 rtweet-0.6.8/rtweet/man/get_trends.Rd | 4 rtweet-0.6.8/rtweet/man/lists_members.Rd | 26 - rtweet-0.6.8/rtweet/man/lookup_collections.Rd | 2 rtweet-0.6.8/rtweet/man/next_cursor.Rd | 18 + rtweet-0.6.8/rtweet/man/post_tweet.Rd | 5 rtweet-0.6.8/rtweet/man/search_users.Rd | 3 rtweet-0.6.8/rtweet/tests/testthat/test-access-level.R |only rtweet-0.6.8/rtweet/tests/testthat/test_direct_messages.R | 7 rtweet-0.6.8/rtweet/tests/testthat/test_get_my_timeline.R | 8 rtweet-0.6.8/rtweet/tests/testthat/test_get_timelines.R | 11 rtweet-0.6.8/rtweet/tests/testthat/test_lists_funs.R | 11 rtweet-0.6.8/rtweet/tests/testthat/test_lookup_coords.R | 6 rtweet-0.6.8/rtweet/tests/testthat/test_stream_tweets.R | 2 rtweet-0.6.8/rtweet/tests/testthat/twitter_tokens |binary rtweet-0.6.8/rtweet/vignettes/FAQ.Rmd | 23 - rtweet-0.6.8/rtweet/vignettes/auth.Rmd | 16 59 files changed, 877 insertions(+), 417 deletions(-)
Title: Succinct and Correct Statistical Summaries for Reports
Description: Succinctly and correctly format statistical summaries of
various models and tests (F-test, Chi-Sq-test, Fisher-test, T-test, and rank-significance). The main purpose is unified reporting
of experimental results, working around issue such as the difficulty of
extracting model summary facts (such as with 'lm'/'glm'). This package also
includes empirical tests, such as bootstrap estimates.
Author: John Mount [aut, cre],
Nina Zumel [aut],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between sigr versions 1.0.0 dated 2018-09-17 and 1.0.1 dated 2018-09-28
DESCRIPTION | 10 ++-- MD5 | 77 ++++++++++++++++++--------------- NAMESPACE | 9 +++ NEWS.md | 6 ++ R/AUCTest.R | 12 ++--- R/BinomTest.R |only R/ChiSqTest.R | 6 +- R/CohenD.R | 4 - R/CorTest.R | 4 - R/DifferenceDistribution.R |only R/EmpiricalFns.R | 11 +++- R/FTest.R | 6 +- R/FisherTest.R | 4 - R/TTest.R | 4 - R/pwr.R | 4 - R/toPresentation.R | 12 ++--- README.md | 2 inst/doc/lmExample.html | 10 ++-- inst/doc/sigrFormatting.html | 30 ++++++------ man/Bernoulli_diff_dist.Rd |only man/render.Rd | 2 man/render.sigr_Bernoulli_diff_test.Rd |only man/render.sigr_aucpairtest.Rd | 4 - man/render.sigr_aucpermtest.Rd | 4 - man/render.sigr_aucresamptest.Rd | 2 man/render.sigr_binomtest.Rd |only man/render.sigr_chisqtest.Rd | 4 - man/render.sigr_cohend.Rd | 4 - man/render.sigr_cortest.Rd | 4 - man/render.sigr_emptest.Rd | 4 - man/render.sigr_fishertest.Rd | 4 - man/render.sigr_ftest.Rd | 4 - man/render.sigr_permtest.Rd | 4 - man/render.sigr_pwr_htest.Rd | 4 - man/render.sigr_significance.Rd | 2 man/render.sigr_ttest.Rd | 4 - man/resampleScoreModelPair.Rd | 4 + man/wrapBinomTest.Rd |only man/wrapBinomTest.data.frame.Rd |only man/wrapBinomTest.htest.Rd |only man/wrapChiSqTest.anova.Rd | 2 man/wrapFTest.anova.Rd | 2 tests/testthat/testBD.R |only tests/testthat/testT1.R | 3 + 44 files changed, 153 insertions(+), 119 deletions(-)
Title: Signature Overrepresentation Analysis
Description: Pathway Analysis is the process of statistically linking observations on the molecular level to biological processes or pathways on the systems (organism, organ, tissue, cell) level.
Traditionally, pathway analysis methods regard pathways as collections of single genes and treat all genes in a pathway as equally informative. This can lead to identification of spurious (misleading) pathways as statistically significant, since components are often shared amongst pathways.
SIGORA seeks to avoid this pitfall by focusing on genes or gene-pairs that are (as a combination) specific to a single pathway. In relying on such pathway gene-pair signatures (Pathway-GPS), SIGORA inherently uses the status of other genes in the experimental context to identify the most relevant pathways.
The current version allows for pathway analysis of human and mouse data sets and contains pre-computed Pathway-GPS data for pathways in the KEGG and Reactome pathway repositories as well as mechanisms for extracting GPS for user supplied repositories.
Author: Amir B.K. Foroushani, Fiona S.L. Brinkman, David J. Lynn
Maintainer: Amir Foroushani <sigora.dev@gmail.com>
Diff between sigora versions 2.0.1 dated 2016-05-10 and 3.0.1 dated 2018-09-28
DESCRIPTION | 8 ++++---- MD5 | 26 +++++++++++++------------- R/getGenes.R | 2 +- R/makeGPS.R | 14 +++++++++++--- R/ora.R | 5 +++-- R/sigora.R | 22 ++++++++++++++-------- data/idmap.rda |binary data/kegH.rda |binary data/kegM.rda |binary data/nciTable.rda |binary data/reaH.rda |binary data/reaM.rda |binary man/sigora-package.Rd | 6 +++--- man/sigora.Rd | 11 +++++------ 14 files changed, 54 insertions(+), 40 deletions(-)
Title: Processes Calcium Imaging Data
Description: Identifies the locations of neurons, and estimates their calcium concentrations over time using the SCALPEL method proposed in Petersen, A., Simon, N., and Witten, D. SCALPEL: Extracting Neurons from Calcium Imaging Data <https://ajpetecom.files.wordpress.com/2017/12/scalpel_dec17.pdf>, which is to appear in the Annals of Applied Statistics.
Author: Ashley Petersen
Maintainer: Ashley Petersen <ashleyjpete@gmail.com>
Diff between scalpel versions 1.0.0 dated 2017-03-14 and 1.0.1 dated 2018-09-28
DESCRIPTION | 10 ++--- MD5 | 68 ++++++++++++++++++++-------------------- R/SCALPEL_helper.R | 3 + R/SCALPEL_stepFunctions.R | 24 ++++++++++---- man/getNeuronStatus.Rd | 1 man/getScalpel.Rd | 1 man/getScalpelStep0.Rd | 1 man/getScalpelStep1.Rd | 1 man/getScalpelStep2.Rd | 1 man/getScalpelStep3.Rd | 1 man/getY.Rd | 1 man/plotBrightest.Rd | 1 man/plotCandidateFrame.Rd | 1 man/plotCluster.Rd | 1 man/plotFrame.Rd | 1 man/plotResults.Rd | 1 man/plotResultsAllLambda.Rd | 1 man/plotSpatial.Rd | 1 man/plotTemporal.Rd | 1 man/plotThresholdedFrame.Rd | 1 man/plotVideoVariance.Rd | 1 man/reviewNeurons.Rd | 1 man/reviewNeuronsInteractive.Rd | 1 man/reviewNeuronsMoreFrames.Rd | 1 man/reviewOverlappingNeurons.Rd | 1 man/scalpel-package.Rd | 1 man/scalpel.Rd | 1 man/scalpelStep0.Rd | 1 man/scalpelStep1.Rd | 1 man/scalpelStep2.Rd | 1 man/scalpelStep3.Rd | 1 man/summary.Rd | 3 - man/updateNeurons.Rd | 1 man/updateNeuronsInteractive.Rd | 1 man/updateThreshold.Rd | 1 35 files changed, 59 insertions(+), 79 deletions(-)
Title: Algorithms using Alternating Direction Method of Multipliers
Description: Provides algorithms to solve popular optimization problems in statistics such as regression or denoising based on Alternating Direction Method of Multipliers (ADMM).
See Boyd et al (2010) <doi:10.1561/2200000016> for complete introduction to the method.
Author: Kisung You [aut, cre] (<https://orcid.org/0000-0002-8584-459X>),
Xiaozhi Zhu [aut]
Maintainer: Kisung You <kyou@nd.edu>
Diff between ADMM versions 0.3.0 dated 2018-05-29 and 0.3.1 dated 2018-09-28
DESCRIPTION | 8 ++++---- MD5 | 20 ++++++++++---------- build/partial.rdb |binary inst/REFERENCES.bib | 15 +-------------- man/ADMM.Rd | 1 - man/GENLASSO.Rd | 4 ++-- man/RPCA.Rd | 4 ++-- man/SPCA.Rd | 4 ++-- man/TV.Rd | 4 ++-- src/Makevars | 4 ++-- src/Makevars.win | 4 ++-- 11 files changed, 27 insertions(+), 41 deletions(-)
Title: Dimension Reduction and Estimation Methods
Description: We provide linear and nonlinear dimension reduction techniques.
Intrinsic dimension estimation methods for exploratory analysis are also provided.
For more details on dimensionality techniques, see the paper by
Ma and Zhu (2013) <doi:10.1111/j.1751-5823.2012.00182.x> if you are interested in
statistical approach, or Engel, Huttenberger, and Hamann (2012)
<doi:10.4230/OASIcs.VLUDS.2011.135> for a broader multi-disciplinary overview.
Author: Kisung You [aut, cre] (<https://orcid.org/0000-0002-8584-459X>)
Maintainer: Kisung You <kyou@nd.edu>
Diff between Rdimtools versions 0.3.2 dated 2018-03-05 and 0.4.0 dated 2018-09-28
Rdimtools-0.3.2/Rdimtools/R/init.R |only Rdimtools-0.3.2/Rdimtools/R/package-Rdimtools.R |only Rdimtools-0.4.0/Rdimtools/DESCRIPTION | 10 Rdimtools-0.4.0/Rdimtools/MD5 | 202 - Rdimtools-0.4.0/Rdimtools/NAMESPACE | 30 Rdimtools-0.4.0/Rdimtools/R/RcppExports.R | 8 Rdimtools-0.4.0/Rdimtools/R/Rdimtools-package.R |only Rdimtools-0.4.0/Rdimtools/R/auxiliary.R | 118 Rdimtools-0.4.0/Rdimtools/R/estimate_Ustat.R |only Rdimtools-0.4.0/Rdimtools/R/estimate_boxcount.R | 113 Rdimtools-0.4.0/Rdimtools/R/estimate_clustering.R |only Rdimtools-0.4.0/Rdimtools/R/estimate_correlation.R | 90 Rdimtools-0.4.0/Rdimtools/R/estimate_incisingball.R |only Rdimtools-0.4.0/Rdimtools/R/estimate_made.R |only Rdimtools-0.4.0/Rdimtools/R/estimate_mle1.R |only Rdimtools-0.4.0/Rdimtools/R/estimate_mle2.R |only Rdimtools-0.4.0/Rdimtools/R/estimate_nearneighbor1.R |only Rdimtools-0.4.0/Rdimtools/R/estimate_nearneighbor2.R |only Rdimtools-0.4.0/Rdimtools/R/estimate_packing.R |only Rdimtools-0.4.0/Rdimtools/R/estimate_pcathr.R |only Rdimtools-0.4.0/Rdimtools/R/estimate_twonn.R |only Rdimtools-0.4.0/Rdimtools/R/linear_ADR.R | 2 Rdimtools-0.4.0/Rdimtools/R/linear_DAGDNE.R | 2 Rdimtools-0.4.0/Rdimtools/R/linear_DNE.R | 3 Rdimtools-0.4.0/Rdimtools/R/linear_ISOPROJ.R | 2 Rdimtools-0.4.0/Rdimtools/R/linear_SPCA.R | 7 Rdimtools-0.4.0/Rdimtools/R/nonlinear_DM.R | 3 Rdimtools-0.4.0/Rdimtools/R/nonlinear_FASTMAP.R |only Rdimtools-0.4.0/Rdimtools/R/nonlinear_IDMAP.R |only Rdimtools-0.4.0/Rdimtools/R/nonlinear_KMMC.R | 2 Rdimtools-0.4.0/Rdimtools/R/nonlinear_LAMP.R |only Rdimtools-0.4.0/Rdimtools/R/nonlinear_LAPEIG.R | 2 Rdimtools-0.4.0/Rdimtools/R/nonlinear_LLLE.R |only Rdimtools-0.4.0/Rdimtools/R/nonlinear_NNP.R |only Rdimtools-0.4.0/Rdimtools/R/nonlinear_PLP.R | 5 Rdimtools-0.4.0/Rdimtools/R/nonlinear_RPCA.R | 4 Rdimtools-0.4.0/Rdimtools/R/nonlinear_SNE.R | 4 Rdimtools-0.4.0/Rdimtools/R/nonlinear_SPMDS.R |only Rdimtools-0.4.0/Rdimtools/R/nonlinear_TSNE.R | 5 Rdimtools-0.4.0/Rdimtools/R/oos_LINPROJ.R | 4 Rdimtools-0.4.0/Rdimtools/R/zzz.R |only Rdimtools-0.4.0/Rdimtools/README.md | 6 Rdimtools-0.4.0/Rdimtools/build/partial.rdb |binary Rdimtools-0.4.0/Rdimtools/inst/REFERENCES.bib | 2946 +++++++++--------- Rdimtools-0.4.0/Rdimtools/man/Rdimtools.Rd | 30 Rdimtools-0.4.0/Rdimtools/man/aux_gensamples.Rd | 27 Rdimtools-0.4.0/Rdimtools/man/do.idmap.Rd |only Rdimtools-0.4.0/Rdimtools/man/do.llle.Rd |only Rdimtools-0.4.0/Rdimtools/man/do.nnp.Rd |only Rdimtools-0.4.0/Rdimtools/man/est.Ustat.Rd |only Rdimtools-0.4.0/Rdimtools/man/est.incisingball.Rd |only Rdimtools-0.4.0/Rdimtools/man/est.made.Rd |only Rdimtools-0.4.0/Rdimtools/man/est.nearneighbor1.Rd |only Rdimtools-0.4.0/Rdimtools/man/est.nearneighbor2.Rd |only Rdimtools-0.4.0/Rdimtools/man/est.twonn.Rd |only Rdimtools-0.4.0/Rdimtools/man/estimate_boxcount.Rd | 40 Rdimtools-0.4.0/Rdimtools/man/estimate_clustering.Rd |only Rdimtools-0.4.0/Rdimtools/man/estimate_correlation.Rd | 38 Rdimtools-0.4.0/Rdimtools/man/estimate_mle1.Rd |only Rdimtools-0.4.0/Rdimtools/man/estimate_mle2.Rd |only Rdimtools-0.4.0/Rdimtools/man/estimate_packing.Rd |only Rdimtools-0.4.0/Rdimtools/man/estimate_pcathr.Rd |only Rdimtools-0.4.0/Rdimtools/man/linear_ADR.Rd | 2 Rdimtools-0.4.0/Rdimtools/man/linear_CNPE.Rd | 4 Rdimtools-0.4.0/Rdimtools/man/linear_DAGDNE.Rd | 2 Rdimtools-0.4.0/Rdimtools/man/linear_DNE.Rd | 3 Rdimtools-0.4.0/Rdimtools/man/linear_ENET.Rd | 6 Rdimtools-0.4.0/Rdimtools/man/linear_ISOPROJ.Rd | 2 Rdimtools-0.4.0/Rdimtools/man/linear_KUDP.Rd | 5 Rdimtools-0.4.0/Rdimtools/man/linear_LEA.Rd | 6 Rdimtools-0.4.0/Rdimtools/man/linear_LFDA.Rd | 3 Rdimtools-0.4.0/Rdimtools/man/linear_LLP.Rd | 7 Rdimtools-0.4.0/Rdimtools/man/linear_LLTSA.Rd | 6 Rdimtools-0.4.0/Rdimtools/man/linear_LMDS.Rd | 4 Rdimtools-0.4.0/Rdimtools/man/linear_LPCA.Rd | 4 Rdimtools-0.4.0/Rdimtools/man/linear_LPMIP.Rd | 6 Rdimtools-0.4.0/Rdimtools/man/linear_LPP.Rd | 7 Rdimtools-0.4.0/Rdimtools/man/linear_LSCORE.Rd | 5 Rdimtools-0.4.0/Rdimtools/man/linear_LSDA.Rd | 4 Rdimtools-0.4.0/Rdimtools/man/linear_MCFS.Rd | 6 Rdimtools-0.4.0/Rdimtools/man/linear_MMP.Rd | 4 Rdimtools-0.4.0/Rdimtools/man/linear_OLPP.Rd | 7 Rdimtools-0.4.0/Rdimtools/man/linear_ONPP.Rd | 4 Rdimtools-0.4.0/Rdimtools/man/linear_PCA.Rd | 4 Rdimtools-0.4.0/Rdimtools/man/linear_PFLPP.Rd | 4 Rdimtools-0.4.0/Rdimtools/man/linear_RNDPROJ.Rd | 6 Rdimtools-0.4.0/Rdimtools/man/linear_SDLPP.Rd | 4 Rdimtools-0.4.0/Rdimtools/man/linear_SPCA.Rd | 7 Rdimtools-0.4.0/Rdimtools/man/linear_UDP.Rd | 4 Rdimtools-0.4.0/Rdimtools/man/nonlinear_CRDA.Rd | 6 Rdimtools-0.4.0/Rdimtools/man/nonlinear_DVE.Rd | 5 Rdimtools-0.4.0/Rdimtools/man/nonlinear_FastMap.Rd |only Rdimtools-0.4.0/Rdimtools/man/nonlinear_ILTSA.Rd | 7 Rdimtools-0.4.0/Rdimtools/man/nonlinear_ISOMAP.Rd | 6 Rdimtools-0.4.0/Rdimtools/man/nonlinear_ISPE.Rd | 3 Rdimtools-0.4.0/Rdimtools/man/nonlinear_KECA.Rd | 5 Rdimtools-0.4.0/Rdimtools/man/nonlinear_KLDE.Rd | 6 Rdimtools-0.4.0/Rdimtools/man/nonlinear_KLFDA.Rd | 8 Rdimtools-0.4.0/Rdimtools/man/nonlinear_KLSDA.Rd | 7 Rdimtools-0.4.0/Rdimtools/man/nonlinear_KMMC.Rd | 2 Rdimtools-0.4.0/Rdimtools/man/nonlinear_KPCA.Rd | 4 Rdimtools-0.4.0/Rdimtools/man/nonlinear_LAMP.Rd |only Rdimtools-0.4.0/Rdimtools/man/nonlinear_LAPEIG.Rd | 9 Rdimtools-0.4.0/Rdimtools/man/nonlinear_LTSA.Rd | 6 Rdimtools-0.4.0/Rdimtools/man/nonlinear_MVU.Rd | 6 Rdimtools-0.4.0/Rdimtools/man/nonlinear_REE.Rd | 6 Rdimtools-0.4.0/Rdimtools/man/nonlinear_RPCA.Rd | 11 Rdimtools-0.4.0/Rdimtools/man/nonlinear_SAMMON.Rd | 4 Rdimtools-0.4.0/Rdimtools/man/nonlinear_SNE.Rd | 5 Rdimtools-0.4.0/Rdimtools/man/nonlinear_SPLAPEIG.Rd | 4 Rdimtools-0.4.0/Rdimtools/man/nonlinear_SPMDS.Rd |only Rdimtools-0.4.0/Rdimtools/man/nonlinear_TSNE.Rd | 2 Rdimtools-0.4.0/Rdimtools/man/oos_LINPROJ.Rd | 4 Rdimtools-0.4.0/Rdimtools/src/Makevars | 4 Rdimtools-0.4.0/Rdimtools/src/Makevars.win | 4 Rdimtools-0.4.0/Rdimtools/src/RcppExports.cpp | 20 Rdimtools-0.4.0/Rdimtools/src/methods_handytools.cpp | 4 Rdimtools-0.4.0/Rdimtools/src/methods_handytools.h | 4 Rdimtools-0.4.0/Rdimtools/src/methods_linear.cpp | 16 Rdimtools-0.4.0/Rdimtools/src/methods_nonlinear.cpp | 15 Rdimtools-0.4.0/Rdimtools/src/methods_nonlinear.h | 1 121 files changed, 2287 insertions(+), 1726 deletions(-)
Title: Brazilian Economic Time Series
Description: It provides access to and information about the most important
Brazilian economic time series - from the Getulio Vargas Foundation <http://portal.fgv.br/en>,
the Central Bank of Brazil <http://www.bcb.gov.br> and the Brazilian Institute of Geography
and Statistics <http://www.ibge.gov.br>. It also presents tools for managing, analysing (e.g.
generating dynamic reports with a complete analysis of a series) and exporting
these time series.
Author: Pedro Costa Ferreira [aut],
Talitha Speranza [aut, cre],
Jonatha Costa [aut],
Fernando Teixeira [ctb],
Daiane Marcolino [ctb]
Maintainer: Talitha Speranza <talitha.speranza@fgv.br>
Diff between BETS versions 0.4.4 dated 2018-06-19 and 0.4.9 dated 2018-09-28
BETS-0.4.4/BETS/inst/macro_dashboard.pdf |only BETS-0.4.9/BETS/DESCRIPTION | 8 +- BETS-0.4.9/BETS/MD5 | 68 ++++++++++++-------- BETS-0.4.9/BETS/NAMESPACE | 8 ++ BETS-0.4.9/BETS/R/BETSsearch.R | 4 - BETS-0.4.9/BETS/R/BETSsources.R |only BETS-0.4.9/BETS/R/bcbExpectA.R |only BETS-0.4.9/BETS/R/bcbExpectAtop5.R |only BETS-0.4.9/BETS/R/bcbExpectInf12.R |only BETS-0.4.9/BETS/R/bcbExpectM.R |only BETS-0.4.9/BETS/R/bcbExpectMtop5.R |only BETS-0.4.9/BETS/R/bcbExpectT.R |only BETS-0.4.9/BETS/R/constants.R | 21 +++--- BETS-0.4.9/BETS/R/draw.cap_utl.R | 2 BETS-0.4.9/BETS/R/draw.cei.R | 2 BETS-0.4.9/BETS/R/draw.conf_lvl.R | 2 BETS-0.4.9/BETS/R/draw.ei_comps.R | 4 - BETS-0.4.9/BETS/R/draw.ei_vars.R | 2 BETS-0.4.9/BETS/R/draw.gdp_comps.R | 2 BETS-0.4.9/BETS/R/draw.gdp_mon.R | 2 BETS-0.4.9/BETS/R/draw.gdp_vars.R | 2 BETS-0.4.9/BETS/R/draw.iie_br.R | 2 BETS-0.4.9/BETS/R/draw.lab_coin.R | 2 BETS-0.4.9/BETS/R/draw.lab_lead.R | 2 BETS-0.4.9/BETS/R/draw.lei.R | 2 BETS-0.4.9/BETS/R/draw.misery_index.R | 2 BETS-0.4.9/BETS/R/draw.sent_ind.R | 2 BETS-0.4.9/BETS/R/draw.survey.R | 2 BETS-0.4.9/BETS/R/get.series.R | 2 BETS-0.4.9/BETS/R/normalize.R | 82 ++++++++++++------------- BETS-0.4.9/BETS/R/sidraSearch.R | 45 +++++++++++++ BETS-0.4.9/BETS/R/zzz.R | 2 BETS-0.4.9/BETS/inst/doc/BETS_basic_usage.html | 4 - BETS-0.4.9/BETS/inst/examples.rds |only BETS-0.4.9/BETS/inst/metadata_en.rds |only BETS-0.4.9/BETS/inst/metadata_pt.rds |only BETS-0.4.9/BETS/man/BETSsources.Rd |only BETS-0.4.9/BETS/man/bcbExpectA.Rd |only BETS-0.4.9/BETS/man/bcbExpectATop5.Rd |only BETS-0.4.9/BETS/man/bcbExpectInf12.Rd |only BETS-0.4.9/BETS/man/bcbExpectM.Rd |only BETS-0.4.9/BETS/man/bcbExpectMTop5.Rd |only BETS-0.4.9/BETS/man/bcbExpectT.Rd |only BETS-0.4.9/BETS/man/normalize.Rd | 2 44 files changed, 174 insertions(+), 104 deletions(-)
Title: Read Text Documents into R
Description: A small collection of convenience tools for reading text documents into R.
Author: Tyler Rinker [aut, cre],
Bryan Goodrich [ctb],
Dason Kurkiewicz [ctb]
Maintainer: Tyler Rinker <tyler.rinker@gmail.com>
Diff between textreadr versions 0.8.1 dated 2018-09-27 and 0.9.0 dated 2018-09-28
DESCRIPTION | 15 +++++----- MD5 | 16 ++++++----- NAMESPACE | 1 NEWS | 6 +++- R/browse.R |only R/read_pdf.R | 40 +++++++++++++++++----------- R/utils.R | 11 ------- README.md | 81 ++++++++++++++++++++++++++++++++++++++++------------------ inst/CITATION | 4 +- man/browse.Rd |only 10 files changed, 106 insertions(+), 68 deletions(-)
Title: Beta Regression
Description: Beta regression for modeling beta-distributed dependent variables, e.g., rates and proportions.
In addition to maximum likelihood regression (for both mean and precision of a beta-distributed
response), bias-corrected and bias-reduced estimation as well as finite mixture models and
recursive partitioning for beta regressions are provided.
Author: Achim Zeileis [aut, cre],
Francisco Cribari-Neto [aut],
Bettina Gruen [aut],
Ioannis Kosmidis [aut],
Alexandre B. Simas [ctb] (earlier version by),
Andrea V. Rocha [ctb] (earlier version by)
Maintainer: Achim Zeileis <Achim.Zeileis@R-project.org>
Diff between betareg versions 3.1-0 dated 2016-08-05 and 3.1-1 dated 2018-09-28
DESCRIPTION | 8 +-- MD5 | 50 ++++++++++++----------- NAMESPACE | 5 ++ NEWS | 6 ++ R/zzz.R |only build/partial.rdb |only build/vignette.rds |binary data/CarTask.rda |binary data/FoodExpenditure.rda |binary data/GasolineYield.rda |binary data/ImpreciseTask.rda |binary data/MockJurors.rda |binary data/ReadingSkills.rda |binary data/StressAnxiety.rda |binary data/WeatherTask.rda |binary inst/doc/betareg-ext.pdf |binary inst/doc/betareg.pdf |binary man/CarTask.Rd | 13 +++--- man/ImpreciseTask.Rd | 11 +++-- man/MockJurors.Rd | 3 - man/ReadingSkills.Rd | 3 - man/StressAnxiety.Rd | 3 - man/WeatherTask.Rd | 11 +++-- tests/Examples/betareg-Ex.Rout.save | 76 ++++++++++++++++++----------------- tests/betamix.Rout.save | 78 ++++++++++++++++++------------------ tests/betatree.Rout.save | 8 +-- vignettes/betareg-ext.Rout.save | 16 +++---- 27 files changed, 157 insertions(+), 134 deletions(-)
Title: Qualitative Interaction Trees
Description: Grows a qualitative interaction tree. Quint is a tool for subgroup analysis, suitable for data from a two-arm randomized controlled trial.
Author: Elise Dusseldorp [aut, cre, cph],
Lisa Doove [aut],
Jeanne van de Put [aut],
Cor Ninaber [ctb] (supported with the plot function),
Iven Van Mechelen [aut, cph],
Juan Claramunt Gonzalez [ctb]
Maintainer: Elise Dusseldorp <elise.dusseldorp@fsw.leidenuniv.nl>
Diff between quint versions 1.2.2 dated 2018-08-22 and 2.0.0 dated 2018-09-28
DESCRIPTION | 15 +- MD5 | 47 ++++---- NAMESPACE | 94 ++++++++--------- NEWS | 186 ++++++++++++++++++----------------- R/SimData_1.R |only R/bcrp.R | 98 +++++++++--------- R/nodeinfo.R | 2 R/plot.quint.R | 95 +++++++++--------- R/predict.quint.R | 263 ++++++++++++++++++++++++++++---------------------- R/prune.quint.R | 113 ++++++++++++++++----- R/quint-package.R | 4 R/quint.R | 59 ++++++++--- R/quint.control.R | 6 - R/quint.validate.R | 10 + R/summary.quint.R | 136 +++++++++++++++---------- data/SimData_1.rda |only man/SimData_1.Rd |only man/bcrp.Rd | 124 +++++++++++------------ man/plot.quint.Rd | 90 ++++++++--------- man/predict.quint.Rd | 118 +++++++++++----------- man/prune.quint.Rd | 124 +++++++++++------------ man/quint-package.Rd | 138 +++++++++++++------------- man/quint.Rd | 235 ++++++++++++++++++++++---------------------- man/quint.control.Rd | 152 ++++++++++++++-------------- man/quint.validate.Rd | 170 ++++++++++++++++---------------- man/summary.quint.Rd | 86 +++++++++------- 26 files changed, 1281 insertions(+), 1084 deletions(-)
Title: Tools to Handle Taxonomic Lists
Description: Some tools to work with taxonomic name lists.
Author: Vijay Barve [aut, cre] (<https://orcid.org/0000-0002-4852-2567>)
Maintainer: Vijay Barve <vijay.barve@gmail.com>
Diff between taxotools versions 0.0.3 dated 2018-09-16 and 0.0.4 dated 2018-09-28
DESCRIPTION | 8 ++++---- MD5 | 5 +++-- NEWS |only R/BuildCSList.R | 18 ++++++++++++------ 4 files changed, 19 insertions(+), 12 deletions(-)
Title: Manipulations of Triangular Meshes Based on the 'VCGLIB' API
Description: Operations on triangular meshes based on 'VCGLIB'. This package
integrates nicely with the R-package 'rgl' to render the meshes processed by
'Rvcg'. The Visualization and Computer Graphics Library (VCG for short) is
an open source portable C++ templated library for manipulation, processing
and displaying with OpenGL of triangle and tetrahedral meshes. The library,
composed by more than 100k lines of code, is released under the GPL license,
and it is the base of most of the software tools of the Visual Computing Lab of
the Italian National Research Council Institute ISTI <http://vcg.isti.cnr.it>,
like 'metro' and 'MeshLab'. The 'VCGLIB' source is pulled from trunk
<https://github.com/cnr-isti-vclab/vcglib> and patched to work with options
determined by the configure script as well as to work with the header files
included by 'RcppEigen'.
Author: Stefan Schlager [aut, cre, cph],
Girinon Francois [ctb]
Maintainer: Stefan Schlager <zarquon42@gmail.com>
Diff between Rvcg versions 0.17 dated 2017-09-07 and 0.18 dated 2018-09-28
DESCRIPTION | 11 +++--- MD5 | 52 ++++++++++++++++---------------- R/Rvcg-package.R | 4 +- R/vcgArea.r | 5 +-- R/vcgCreateKD.r | 4 ++ R/vcgIsolated.r | 4 +- R/vcgPlatonic.r | 2 - inst/NEWS.Rd | 12 +++++++ man/Rvcg-package.Rd | 4 +- man/vcgArea.Rd | 4 +- man/vcgClost.Rd | 5 +-- man/vcgClostKD.Rd | 4 +- man/vcgCreateKDtreeFromBarycenters.Rd | 5 ++- man/vcgImport.Rd | 4 +- man/vcgIsolated.Rd | 4 +- man/vcgKDtree.Rd | 3 + man/vcgKmeans.Rd | 3 + man/vcgMetro.Rd | 10 +++--- man/vcgPlatonic.Rd | 2 - man/vcgSample.Rd | 5 +-- man/vcgSearchKDtree.Rd | 2 + man/vcgUpdateNormals.Rd | 3 + src/Rarea.cpp | 29 ++++++++++++++--- src/Rintersect.cpp | 7 +++- src/Rsmooth.cpp | 22 ++++++++----- src/init.c | 4 +- src/vcglib/wrap/io_trimesh/export_stl.h | 2 - 27 files changed, 135 insertions(+), 81 deletions(-)
Title: 'Antares' Results Processing
Description: Process results generated by 'Antares', a powerful open source software developed by
RTE (Réseau de Transport d’Électricité) to simulate and study electric power systems (more information about
'Antares' here: <https://github.com/AntaresSimulatorTeam/Antares_Simulator>). You can see the results of several ANTARES studies here : <http://bpnumerique.rte-france.com/>.
This package provides functions to create new columns like net load, load factors, upward and
downward margins or to compute aggregated statistics like economic surpluses
of consumers, producers and sectors.
Author: Jalal-Edine ZAWAM [aut, cre],
Francois Guillem [aut],
Benoit Thieurmel [aut],
Titouan Robert [aut],
RTE [cph]
Maintainer: Jalal-Edine ZAWAM <jalal-edine.zawam@rte-france.com>
Diff between antaresProcessing versions 0.15.3 dated 2018-06-01 and 0.16.0 dated 2018-09-28
DESCRIPTION | 18 +- MD5 | 58 +++---- NEWS | 9 + R/compare.R | 251 ++++++++++++++++++++----------- R/h5_processing.R | 10 - R/surplus.R | 2 R/zzz.R | 7 README.md | 178 +++++++++++---------- build/vignette.rds |binary inst/doc/antaresProcessing.html | 4 man/addProcessingH5.Rd | 9 - man/compare.Rd | 65 +++++++- man/externalDependency.Rd | 3 man/loadFactor.Rd | 4 man/modulation.Rd | 4 man/surplusSectors.Rd | 6 tests/testthat/helper_init.R | 178 ++++++++++----------- tests/testthat/test-addDownwardMargin.R | 2 tests/testthat/test-addExportAndImport.R | 110 ++++++------- tests/testthat/test-addUpwardMargin.R | 2 tests/testthat/test-compare.R | 141 ++++++++++++++++- tests/testthat/test-externalDependency.R | 18 +- tests/testthat/test-getValues.R | 60 +++---- tests/testthat/test-h5_processing.R | 5 tests/testthat/test-loadFactor.R | 75 +++++---- tests/testthat/test-modulation.R | 156 +++++++++---------- tests/testthat/test-netLoadRamp.R | 96 +++++------ tests/testthat/test-surplus.R | 38 ++++ tests/testthat/test-surplusClusters.R | 74 ++++----- tests/testthat/test-surplusSectors.R | 30 +-- 30 files changed, 964 insertions(+), 649 deletions(-)
More information about antaresProcessing at CRAN
Permanent link
Title: Highest Quality GIF Encoder
Description: Multi-threaded GIF encoder written in Rust: <https://gif.ski/>.
Converts images to GIF animations using pngquant's efficient cross-frame
palettes and temporal dithering with thousands of colors per frame.
Author: Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>),
Kornel Lesiński [cph] (Gifski Rust library)
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between gifski versions 0.8.3 dated 2018-07-20 and 0.8.6 dated 2018-09-28
DESCRIPTION | 7 - MD5 | 19 +-- NEWS |only R/gifski.R | 9 - src/Makevars.in | 4 src/Makevars.win | 2 src/myrustlib/Cargo.lock | 262 ++++++++++++++++++++++------------------------- src/myrustlib/Cargo.toml | 2 src/myrustlib/gifski.h | 55 ++++++--- src/wrapper.c | 27 +++- tools/winlibs.R | 4 11 files changed, 205 insertions(+), 186 deletions(-)
Title: Import, Manipulate and Explore the Results of an 'Antares'
Simulation
Description: Import, manipulate and explore results generated by 'Antares', a
powerful open source software developed by RTE (Réseau de Transport d’Électricité) to simulate and study electric power systems
(more information about 'Antares' here : <https://github.com/AntaresSimulatorTeam/Antares_Simulator>). You can see the results of several ANTARES studies here : <http://bpnumerique.rte-france.com/>.
Author: Jalal-Edine ZAWAM [aut, cre],
Francois Guillem [aut],
Benoit Thieurmel [aut],
Titouan Robert [aut],
RTE [cph]
Maintainer: Jalal-Edine ZAWAM <jalal-edine.zawam@rte-france.com>
Diff between antaresRead versions 2.1.2 dated 2018-06-04 and 2.2.0 dated 2018-09-28
DESCRIPTION | 20 MD5 | 62 - NAMESPACE | 1 NEWS | 14 R/groupByDistrict.R | 36 R/h5_readInputs.R | 6 R/h5_timeManagement.R | 2 R/h5_writeH5ByYear.R | 12 R/importOutput.R | 12 R/readAntares.R | 1512 +++++++++++++-------------- R/readBindingConstraints.R | 2 R/readClusterDesc.R | 2 R/readLayout.R | 4 R/removeVirtualAreas.R | 140 +- R/setSimulationPath.R | 4 R/zzz.R | 70 + build/vignette.rds |binary inst/doc/antares.html | 4 inst/doc/antaresH5.html | 11 man/readAntares.Rd | 11 man/readInputTS.Rd | 5 man/removeVirtualAreas.Rd | 12 man/setAlias.Rd | 2 man/writeAntaresH5.Rd | 7 tests/testthat/helper_init.R | 6 tests/testthat/test-h5ReadAntares.R | 2 tests/testthat/test-h5_nodata.R | 4 tests/testthat/test-h5_readInputs.R | 2 tests/testthat/test-h5_setSimulationPathH5.R | 2 tests/testthat/test-h5_write.R | 11 tests/testthat/test-removeVirtualAreas.R | 173 ++- tests/testthat/test-viewAntares.R | 6 32 files changed, 1240 insertions(+), 917 deletions(-)
Title: Spatial Dependence: Weighting Schemes, Statistics and Models
Description: A collection of functions to create spatial weights matrix
objects from polygon 'contiguities', from point patterns by distance and
tessellations, for summarizing these objects, and for permitting their
use in spatial data analysis, including regional aggregation by minimum
spanning tree; a collection of tests for spatial 'autocorrelation',
including global 'Morans I', 'APLE', 'Gearys C', 'Hubert/Mantel' general cross
product statistic, Empirical Bayes estimates and 'Assunção/Reis' Index,
'Getis/Ord' G and multicoloured join count statistics, local 'Moran's I'
and 'Getis/Ord' G, 'saddlepoint' approximations, exact tests for global
and local 'Moran's I' and 'LOSH' local indicators of spatial heteroscedasticity;
and functions for estimating spatial simultaneous
'autoregressive' ('SAR') lag and error models, impact measures for lag
models, weighted and 'unweighted' 'SAR' and 'CAR' spatial regression models,
semi-parametric and Moran 'eigenvector' spatial filtering, 'GM SAR' error
models, and generalized spatial two stage least squares models.
Author: Roger Bivand [cre, aut] (<https://orcid.org/0000-0003-2392-6140>),
Micah Altman [ctb],
Luc Anselin [ctb],
Renato Assunção [ctb],
Olaf Berke [ctb],
Andrew Bernat [ctb],
Guillaume Blanchet [ctb],
Eric Blankmeyer [ctb],
Marilia Carvalho [ctb],
Bjarke Christensen [ctb],
Yongwan Chun [ctb],
Carsten Dormann [ctb],
Stéphane Dray [ctb],
Virgilio Gómez-Rubio [ctb],
Martin Gubri [ctb],
Rein Halbersma [ctb],
Elias Krainski [ctb],
Pierre Legendre [ctb],
Nicholas Lewin-Koh [ctb],
Hongfei Li [ctb],
Jielai Ma [ctb],
Abhirup Mallik [ctb, trl],
Giovanni Millo [ctb],
Werner Mueller [ctb],
Hisaji Ono [ctb],
Pedro Peres-Neto [ctb],
Gianfranco Piras [ctb],
Markus Reder [ctb],
Michael Tiefelsdorf [ctb],
René Westerholt [ctb],
Danlin Yu [ctb]
Maintainer: Roger Bivand <Roger.Bivand@nhh.no>
Diff between spdep versions 0.7-8 dated 2018-08-15 and 0.7-9 dated 2018-09-28
DESCRIPTION | 8 - MD5 | 58 +++++----- R/error.spsarlm.R | 235 +++++++++++++++++++++++++++++++++++++----- R/impacts.R | 89 +++++++++++++-- R/lag.spsarlm.R | 82 +++++++++++++- R/sacsarlm.R | 57 +++++++++- R/spBreg.R | 105 ++++++++++++++++-- R/summary.spsarlm.R | 2 inst/CITATION | 31 ++++- inst/doc/CO69.pdf |binary inst/doc/SpatialFiltering.pdf |binary inst/doc/nb.pdf |binary inst/doc/nb_sf.R | 2 inst/doc/nb_sf.Rmd | 2 inst/doc/nb_sf.html | 42 +++---- inst/doc/sids.pdf |binary man/EBImoran.mc.Rd | 3 man/errorsarlm.Rd | 31 +++-- man/geary.test.Rd | 2 man/globalG.test.Rd | 2 man/impacts.sarlm.Rd | 20 ++- man/lagsarlm.Rd | 93 ++++++++++++++-- man/lm.morantest.sad.Rd | 2 man/localG.Rd | 2 man/localmoran.Rd | 2 man/localmoran.exact.Rd | 3 man/moran.test.Rd | 2 man/sacsarlm.Rd | 34 ++++-- man/summary.sarlm.Rd | 1 vignettes/nb_sf.Rmd | 2 30 files changed, 740 insertions(+), 172 deletions(-)
Title: Mixed-Effect Models, Particularly Spatial Models
Description: Inference based on mixed-effect models, including generalized linear mixed models with spatial correlations and models with non-Gaussian random effects (e.g., Beta). Variation in residual variance (heteroscedasticity) can itself be represented by a generalized linear mixed model. Various approximations of likelihood or restricted likelihood are implemented, in particular h-likelihood (Lee and Nelder 2001 <doi:10.1093/biomet/88.4.987>) and Laplace approximation.
Author: François Rousset [aut, cre, cph]
(<https://orcid.org/0000-0003-4670-0371>),
Jean-Baptiste Ferdy [aut, cph],
Alexandre Courtiol [aut] (<https://orcid.org/0000-0003-0637-2959>),
GSL authors [ctb] (src/gsl_bessel.*)
Maintainer: François Rousset <francois.rousset@umontpellier.fr>
Diff between spaMM versions 2.4.35 dated 2018-05-19 and 2.5.0 dated 2018-09-28
spaMM-2.4.35/spaMM/man/Predictor.Rd |only spaMM-2.4.35/spaMM/man/spaMM-internal-Rcpp.Rd |only spaMM-2.4.35/spaMM/tests/testthat/test-sp-nsp.R |only spaMM-2.5.0/spaMM/DESCRIPTION | 25 spaMM-2.5.0/spaMM/MD5 | 239 +- spaMM-2.5.0/spaMM/NAMESPACE | 27 spaMM-2.5.0/spaMM/R/COMPoisson.R | 21 spaMM-2.5.0/spaMM/R/CanonizeRanPars.R | 73 spaMM-2.5.0/spaMM/R/GLM.fit.R | 6 spaMM-2.5.0/spaMM/R/HLCor.R | 15 spaMM-2.5.0/spaMM/R/HLCor_body.R | 68 spaMM-2.5.0/spaMM/R/HLFactorList.R | 285 +-- spaMM-2.5.0/spaMM/R/HLfit.R | 47 spaMM-2.5.0/spaMM/R/HLfit_Internals.R | 1008 +++++++---- spaMM-2.5.0/spaMM/R/HLfit_b_internals.R | 32 spaMM-2.5.0/spaMM/R/HLfit_body.R | 403 ++-- spaMM-2.5.0/spaMM/R/HLfit_body_augZXy.R |only spaMM-2.5.0/spaMM/R/HLframes.R | 225 +- spaMM-2.5.0/spaMM/R/LR.R | 29 spaMM-2.5.0/spaMM/R/LevenbergMstep.R | 7 spaMM-2.5.0/spaMM/R/MakeCovEst.R | 403 +--- spaMM-2.5.0/spaMM/R/Matern_family.R |only spaMM-2.5.0/spaMM/R/RcppExports.R | 32 spaMM-2.5.0/spaMM/R/calc_LRT.R | 368 ++-- spaMM-2.5.0/spaMM/R/calc_logdisp_cov.R | 132 - spaMM-2.5.0/spaMM/R/confint.R | 68 spaMM-2.5.0/spaMM/R/corMatern.R | 9 spaMM-2.5.0/spaMM/R/corrHLfit-internals.R | 299 ++- spaMM-2.5.0/spaMM/R/corrHLfit.R | 53 spaMM-2.5.0/spaMM/R/corrHLfit_body.R | 108 - spaMM-2.5.0/spaMM/R/corrMM.LRT.R | 15 spaMM-2.5.0/spaMM/R/corrPars.R | 29 spaMM-2.5.0/spaMM/R/correlationFns.R | 65 spaMM-2.5.0/spaMM/R/cov_new_fix.R | 40 spaMM-2.5.0/spaMM/R/determine_spprec.R | 70 spaMM-2.5.0/spaMM/R/extractors.R | 187 +- spaMM-2.5.0/spaMM/R/fit_as_ZX.R | 167 - spaMM-2.5.0/spaMM/R/fit_as_sparsePrecision.R | 392 ++-- spaMM-2.5.0/spaMM/R/fitme.R | 44 spaMM-2.5.0/spaMM/R/fitme_body.R | 114 - spaMM-2.5.0/spaMM/R/fitmecorrHLfit_body_internals.R | 201 -- spaMM-2.5.0/spaMM/R/geo_info.R | 129 - spaMM-2.5.0/spaMM/R/locoptim.R | 40 spaMM-2.5.0/spaMM/R/makeLowerUpper.R | 22 spaMM-2.5.0/spaMM/R/merge_parlist.R | 61 spaMM-2.5.0/spaMM/R/negbin.R | 1 spaMM-2.5.0/spaMM/R/newPLS.R | 600 ++++-- spaMM-2.5.0/spaMM/R/precision_internals.R | 4 spaMM-2.5.0/spaMM/R/predict.R | 88 spaMM-2.5.0/spaMM/R/predictor.R | 49 spaMM-2.5.0/spaMM/R/preprocess.R | 479 +++-- spaMM-2.5.0/spaMM/R/preprocess_internals.R | 2 spaMM-2.5.0/spaMM/R/profile.R | 28 spaMM-2.5.0/spaMM/R/sXaug_EigenDense_QRP_Chol_scaled.R | 120 - spaMM-2.5.0/spaMM/R/sXaug_Matrix_QRP_CHM.R | 31 spaMM-2.5.0/spaMM/R/sXaug_sparsePrecisions.R | 272 +- spaMM-2.5.0/spaMM/R/save.R | 50 spaMM-2.5.0/spaMM/R/separator.R | 17 spaMM-2.5.0/spaMM/R/simulate.HL.R | 76 spaMM-2.5.0/spaMM/R/spaMM.data.R | 51 spaMM-2.5.0/spaMM/R/spaMM_boot.R | 41 spaMM-2.5.0/spaMM/R/spaMM_error.R |only spaMM-2.5.0/spaMM/R/step_HLfit.R |only spaMM-2.5.0/spaMM/R/summary.HL.R | 283 +-- spaMM-2.5.0/spaMM/R/update.HL.R | 105 - spaMM-2.5.0/spaMM/R/utils.R | 25 spaMM-2.5.0/spaMM/build |only spaMM-2.5.0/spaMM/inst/NEWS.Rd | 51 spaMM-2.5.0/spaMM/man/AIC.Rd |only spaMM-2.5.0/spaMM/man/COMPoisson.Rd | 3 spaMM-2.5.0/spaMM/man/CauchyCorr.Rd | 8 spaMM-2.5.0/spaMM/man/GLM.fit.Rd | 17 spaMM-2.5.0/spaMM/man/HLCor.Rd | 3 spaMM-2.5.0/spaMM/man/HLfit.Rd | 14 spaMM-2.5.0/spaMM/man/Loaloa.Rd | 16 spaMM-2.5.0/spaMM/man/MSFDR.Rd |only spaMM-2.5.0/spaMM/man/Matern.corr.Rd | 6 spaMM-2.5.0/spaMM/man/PLS-internals.Rd | 44 spaMM-2.5.0/spaMM/man/anova.HLfit.Rd | 18 spaMM-2.5.0/spaMM/man/autoregressive.Rd | 5 spaMM-2.5.0/spaMM/man/corrHLfit.Rd | 6 spaMM-2.5.0/spaMM/man/corr_family.Rd |only spaMM-2.5.0/spaMM/man/covStruct.Rd | 52 spaMM-2.5.0/spaMM/man/designL.from.Corr.Rd | 12 spaMM-2.5.0/spaMM/man/extractors.Rd | 43 spaMM-2.5.0/spaMM/man/fitme.Rd | 6 spaMM-2.5.0/spaMM/man/fixed.LRT.Rd | 12 spaMM-2.5.0/spaMM/man/how.Rd |only spaMM-2.5.0/spaMM/man/is_separated.Rd |only spaMM-2.5.0/spaMM/man/make.scaled.dist.Rd | 5 spaMM-2.5.0/spaMM/man/mat_sqrt.Rd |only spaMM-2.5.0/spaMM/man/negbin.Rd | 2 spaMM-2.5.0/spaMM/man/options.Rd | 4 spaMM-2.5.0/spaMM/man/pedigree.Rd | 2 spaMM-2.5.0/spaMM/man/poisson.Rd | 2 spaMM-2.5.0/spaMM/man/predict.Rd | 8 spaMM-2.5.0/spaMM/man/simulate.HLCor.Rd | 21 spaMM-2.5.0/spaMM/man/spaMM-internal.Rd | 4 spaMM-2.5.0/spaMM/man/spaMM_boot.Rd | 17 spaMM-2.5.0/spaMM/man/summary.HL.Rd | 2 spaMM-2.5.0/spaMM/man/sym_svd.Rd | 6 spaMM-2.5.0/spaMM/man/update.Rd | 4 spaMM-2.5.0/spaMM/man/welding.Rd | 2 spaMM-2.5.0/spaMM/src/PLS.cpp | 76 spaMM-2.5.0/spaMM/src/PLS.h | 40 spaMM-2.5.0/spaMM/src/RcppExports.cpp | 106 - spaMM-2.5.0/spaMM/src/spaMM_linear.cpp | 144 - spaMM-2.5.0/spaMM/tests/testthat/nestedFiles |only spaMM-2.5.0/spaMM/tests/testthat/test-AR1.R | 4 spaMM-2.5.0/spaMM/tests/testthat/test-CAR.R | 10 spaMM-2.5.0/spaMM/tests/testthat/test-HLfit.R | 3 spaMM-2.5.0/spaMM/tests/testthat/test-Infusion.R |only spaMM-2.5.0/spaMM/tests/testthat/test-IsoriX.R |only spaMM-2.5.0/spaMM/tests/testthat/test-LRT-boot.R | 8 spaMM-2.5.0/spaMM/tests/testthat/test-MSFDR.R |only spaMM-2.5.0/spaMM/tests/testthat/test-Nugget.R | 33 spaMM-2.5.0/spaMM/tests/testthat/test-Rasch.R | 3 spaMM-2.5.0/spaMM/tests/testthat/test-adjacency-corrMatrix.R | 17 spaMM-2.5.0/spaMM/tests/testthat/test-adjacency-long.R | 4 spaMM-2.5.0/spaMM/tests/testthat/test-augZXy.R |only spaMM-2.5.0/spaMM/tests/testthat/test-blackbox.R | 39 spaMM-2.5.0/spaMM/tests/testthat/test-confint.R | 14 spaMM-2.5.0/spaMM/tests/testthat/test-dhglm.R | 11 spaMM-2.5.0/spaMM/tests/testthat/test-fixedLRT.R | 4 spaMM-2.5.0/spaMM/tests/testthat/test-pedigree.R | 2 spaMM-2.5.0/spaMM/tests/testthat/test-poly.R |only spaMM-2.5.0/spaMM/tests/testthat/test-predVar.R | 42 spaMM-2.5.0/spaMM/tests/testthat/test-ranCoefs.R |only spaMM-2.5.0/spaMM/tests/testthat/test-random-slope.R | 19 spaMM-2.5.0/spaMM/tests/testthat/test-separation.R |only spaMM-2.5.0/spaMM/tests/testthat/test-spaMM.R | 2 131 files changed, 5124 insertions(+), 3732 deletions(-)
Title: Get WHO Tuberculosis Data
Description: Facilitates easy import of analysis ready World Health Organisation Tuberculosis data and provides plotting functions for exploratory data analysis.
Author: Sam Abbott [aut, cre] (<https://orcid.org/0000-0001-8057-8037>)
Maintainer: Sam Abbott <contact@samabbott.co.uk>
Diff between getTBinR versions 0.5.4 dated 2018-05-16 and 0.5.5 dated 2018-09-28
DESCRIPTION | 10 - MD5 | 68 ++++---- NEWS.md | 14 + R/map_tb_burden.R | 7 R/plot_tb_burden.R | 8 - R/plot_tb_burden_overview.R | 2 R/prepare_df_plot.R | 11 + R/summarise_tb_burden.R | 12 - README.md | 36 ++-- build/vignette.rds |binary inst/doc/case_fatality_rate.R | 28 +-- inst/doc/case_fatality_rate.Rmd | 46 ++--- inst/doc/case_fatality_rate.html | 201 ++++++++++++-------------- inst/doc/case_study_global_trends.R | 6 inst/doc/case_study_global_trends.Rmd | 6 inst/doc/case_study_global_trends.html | 27 +-- inst/doc/intro.R | 3 inst/doc/intro.Rmd | 5 inst/doc/intro.html | 123 +++++++-------- man/figure/map-tb-incidence-eur-1.png |binary man/figure/plot-tb-incidence-eur-1.png |binary man/figure/plot-tb-incidence-eur-per-1.png |binary man/figure/plot-tb-incidence-uk-1.png |binary man/getTBinR-package.Rd | 2 man/get_data.Rd | 3 man/map_tb_burden.Rd | 4 man/plot_tb_burden.Rd | 13 + man/plot_tb_burden_overview.Rd | 17 +- man/prepare_df_plot.Rd | 4 man/summarise_tb_burden.Rd | 15 + tests/testthat/test-plot_tb_burden_overview.R | 2 tests/testthat/test-prepare_df_plot.R | 13 + vignettes/case_fatality_rate.Rmd | 46 ++--- vignettes/case_study_global_trends.Rmd | 6 vignettes/intro.Rmd | 5 35 files changed, 385 insertions(+), 358 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-08-14 0.3.0
2018-05-06 0.2.0
2018-03-14 0.1.1
2018-02-22 0.1.0
Title: Supervised Component Generalized Linear Regression
Description: An extension of the Fisher Scoring Algorithm to combine PLS regression with GLM
estimation in the multivariate context. Covariates can also be grouped in themes.
Author: Guillaume Cornu [aut, cre] (<https://orcid.org/0000-0002-7523-5176>),
Frederic Mortier [aut],
Catherine Trottier [aut],
Xavier Bry [aut],
Sylvie Gourlet-Fleury [dtc] (<https://orcid.org/0000-0002-1136-4307>,
http://www.coforchange.eu/),
Claude Garcia [dtc] (<https://orcid.org/0000-0002-7351-0226>,
http://www.cofortips.org/)
Maintainer: Guillaume Cornu <gcornu@cirad.fr>
Diff between SCGLR versions 2.0.3 dated 2016-03-16 and 3.0 dated 2018-09-28
SCGLR-2.0.3/SCGLR/NEWS |only SCGLR-2.0.3/SCGLR/R/f2x.r |only SCGLR-2.0.3/SCGLR/R/multivariateGlm.r |only SCGLR-2.0.3/SCGLR/build |only SCGLR-2.0.3/SCGLR/inst/doc |only SCGLR-2.0.3/SCGLR/man/method.Rd |only SCGLR-2.0.3/SCGLR/man/multivariateGlm.Rd |only SCGLR-2.0.3/SCGLR/man/scglr-package.Rd |only SCGLR-2.0.3/SCGLR/vignettes |only SCGLR-3.0/SCGLR/DESCRIPTION | 45 SCGLR-3.0/SCGLR/MD5 | 92 +- SCGLR-3.0/SCGLR/NAMESPACE | 91 +- SCGLR-3.0/SCGLR/NEWS.md |only SCGLR-3.0/SCGLR/R/infoCriterion.r | 183 +--- SCGLR-3.0/SCGLR/R/ingUtils.r | 184 ++-- SCGLR-3.0/SCGLR/R/kComponents.r | 112 +- SCGLR-3.0/SCGLR/R/methods.r | 92 -- SCGLR-3.0/SCGLR/R/metric.r | 40 SCGLR-3.0/SCGLR/R/multivariateFormula.r | 258 +++++ SCGLR-3.0/SCGLR/R/multivariateGlm.fit.r | 180 ++- SCGLR-3.0/SCGLR/R/multivariatePredictGlm.r | 205 ++-- SCGLR-3.0/SCGLR/R/oneComponent.r | 436 ++++----- SCGLR-3.0/SCGLR/R/package.r | 56 - SCGLR-3.0/SCGLR/R/plot.r | 1045 +++++++++++------------ SCGLR-3.0/SCGLR/R/print.r | 34 SCGLR-3.0/SCGLR/R/scglr.r | 456 +++++----- SCGLR-3.0/SCGLR/R/scglrCrossVal.r | 166 ++- SCGLR-3.0/SCGLR/R/summary.r | 157 +-- SCGLR-3.0/SCGLR/R/theme.r |only SCGLR-3.0/SCGLR/R/theme_backward.r |only SCGLR-3.0/SCGLR/R/utils.r | 45 SCGLR-3.0/SCGLR/README.md |only SCGLR-3.0/SCGLR/demo/scglrPrediction.r | 11 SCGLR-3.0/SCGLR/inst/examples/exPrediction.r | 9 SCGLR-3.0/SCGLR/man/barplot.SCGLR.Rd | 48 - SCGLR-3.0/SCGLR/man/barplot.SCGLRTHM.Rd |only SCGLR-3.0/SCGLR/man/cash-.MultivariateFormula.Rd |only SCGLR-3.0/SCGLR/man/critConvergence.Rd | 41 SCGLR-3.0/SCGLR/man/customize.Rd | 151 +-- SCGLR-3.0/SCGLR/man/genus.Rd | 75 - SCGLR-3.0/SCGLR/man/infoCriterion.Rd | 66 - SCGLR-3.0/SCGLR/man/methodSR.Rd |only SCGLR-3.0/SCGLR/man/multivariateFormula.Rd | 79 + SCGLR-3.0/SCGLR/man/multivariateGlm.fit.Rd |only SCGLR-3.0/SCGLR/man/multivariatePredictGlm.Rd | 165 +-- SCGLR-3.0/SCGLR/man/pairs.SCGLR.Rd | 52 - SCGLR-3.0/SCGLR/man/plot.SCGLR.Rd | 125 +- SCGLR-3.0/SCGLR/man/plot.SCGLRTHM.Rd |only SCGLR-3.0/SCGLR/man/print.MultivariateFormula.Rd |only SCGLR-3.0/SCGLR/man/print.SCGLR.Rd | 34 SCGLR-3.0/SCGLR/man/scglr.Rd | 213 ++-- SCGLR-3.0/SCGLR/man/scglrCrossVal.Rd | 182 +--- SCGLR-3.0/SCGLR/man/scglrTheme.Rd |only SCGLR-3.0/SCGLR/man/scglrThemeBackward.Rd |only SCGLR-3.0/SCGLR/man/screeplot.SCGLR.Rd |only SCGLR-3.0/SCGLR/man/screeplot.SCGLRTHM.Rd |only SCGLR-3.0/SCGLR/man/summary.SCGLR.Rd | 68 - 57 files changed, 2800 insertions(+), 2396 deletions(-)
Title: Test and Item Analysis via Shiny
Description: Interactive shiny application for analysis of educational tests and
their items.
Author: Patricia Martinkova [aut, cre],
Adela Drabinova [aut],
Ondrej Leder [aut],
Jakub Houdek [aut],
Lubomir Stepanek [ctb]
Maintainer: Patricia Martinkova <martinkova@cs.cas.cz>
Diff between ShinyItemAnalysis versions 1.2.7 dated 2018-05-06 and 1.2.8 dated 2018-09-28
ShinyItemAnalysis-1.2.7/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/counterOLD.Rdata |only ShinyItemAnalysis-1.2.7/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/functions |only ShinyItemAnalysis-1.2.7/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/latex/titlepage.sty |only ShinyItemAnalysis-1.2.7/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/www/Thumbs.db |only ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/DESCRIPTION | 17 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/MD5 | 66 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/NAMESPACE | 7 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/NEWS | 115 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/R/DDplot.R | 23 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/R/ggWrightMap.R |only ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/R/plotDIFLogistic.R | 14 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/R/plotDIFirt.R | 79 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/R/plotDistractorAnalysis.R | 15 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/R/theme_app.R |only ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/README.md | 15 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/counter.Rdata |binary ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/reporthtml.Rmd | 6 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/reportpdf.Rmd | 41 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/server.R | 208 - ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/server/DIF.R | 582 ++ ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/server/Data.R |only ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/server/IRT.R | 82 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/server/Regression.R | 45 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/server/Reliability.R |only ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/server/Summary.R | 2 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/server/TraditionalAnalysis.R | 8 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/server/Validity.R | 7 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/ui.R | 2013 ++++++---- ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/ui/About.R | 231 - ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/ui/Data.R | 367 + ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/ui/IRT.R | 162 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/www/bootstrap.css | 130 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/www/box.css |only ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/www/collapsible_menu_click.js |only ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/www/footer_cran_icon.png |binary ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/www/header_hexbin.png |only ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/www/margins_and_paddings.css | 51 ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/man/ggWrightMap.Rd |only ShinyItemAnalysis-1.2.8/ShinyItemAnalysis/man/theme_app.Rd |only 39 files changed, 2646 insertions(+), 1640 deletions(-)
More information about ShinyItemAnalysis at CRAN
Permanent link
Title: Interface Between GRASS 7 Geographical Information System and R
Description: Interpreted interface between 'GRASS' 7 geographical
information system and R, based on starting R from within the 'GRASS' 'GIS'
environment, or running free-standing R in a temporary 'GRASS' location;
the package provides facilities for using all 'GRASS' commands from the
R command line. This package may not be used for 'GRASS' 6, for which
'spgrass6' should be used.
Author: Roger Bivand [cre, aut],
Rainer Krug [ctb],
Markus Neteler [ctb],
Sebastian Jeworutzki [ctb]
Maintainer: Roger Bivand <Roger.Bivand@nhh.no>
Diff between rgrass7 versions 0.1-10 dated 2017-10-11 and 0.1-12 dated 2018-09-28
ChangeLog | 29 +++++++++++++++++++++++++++++ DESCRIPTION | 22 +++++++++++----------- MD5 | 12 ++++++------ R/initGRASS.R | 18 +++++++++++++++--- R/vect_link.R | 26 ++++++++++++++++---------- inst/ChangeLog | 29 +++++++++++++++++++++++++++++ man/rgrass.Rd | 2 +- 7 files changed, 107 insertions(+), 31 deletions(-)
Title: Restricted Statistical Estimation and Inference for Linear
Models
Description: Allow for easy-to-use testing or evaluating of linear equality and inequality
restrictions about parameters and effects in (generalized) linear statistical models.
Author: Leonard Vanbrabant [aut, cre],
Yves Rosseel [ctb]
Maintainer: Leonard Vanbrabant <Leonard.Vanbrabant@Ugent.be>
Diff between restriktor versions 0.1-80.711 dated 2017-12-04 and 0.1-80.811 dated 2018-09-28
DESCRIPTION | 13 ++++---- MD5 | 16 +++++----- NAMESPACE | 28 ++++++++++++++++-- R/conTest.R | 53 +++++++++++++++++++++------------- R/con_goric.R | 40 ++++++++++++++++---------- R/restriktor.R | 14 ++++++--- inst/NEWS | 70 ++++++++++++++++++++++++---------------------- man/goric.Rd | 3 + man/restriktor-package.rd | 32 ++++++++++++++------- 9 files changed, 170 insertions(+), 99 deletions(-)
Title: Simulating Neutral Landscape Models
Description: Provides neutral landscape models (<doi:10.1007/BF02275262>,
<http://sci-hub.tw/10.1007/bf02275262>).
Neutral landscape models range from "hard"
neutral models (completely random distributed), to "soft" neutral models
(definable spatial characteristics) and generate landscape patterns that are
independent of ecological processes.
Thus, these patterns can be used as null models in landscape ecology. 'nlmr'
combines a large number of algorithms from other published software for
simulating neutral landscapes. The simulation results are obtained in a
geospatial data format (raster* objects from the 'raster' package) and can,
therefore, be used in any sort of raster data operation that is performed
with standard observation data.
Author: Marco Sciaini [aut, cre] (<https://orcid.org/0000-0002-3042-5435>),
Matthias Fritsch [aut],
Craig Simpkins [aut] (<https://orcid.org/0000-0003-3212-1379>),
Cédric Scherer [aut] (<https://orcid.org/0000-0003-0465-2543>),
Laura Graham [rev] (Laura reviewed the package for rOpenSci, see
https://github.com/ropensci/onboarding/issues/188),
Jeffrey Hollister [rev] (Jeffrey reviewed the package for rOpenSci, see
https://github.com/ropensci/onboarding/issues/188)
Maintainer: Marco Sciaini <sciaini.marco@gmail.com>
Diff between NLMR versions 0.3.0 dated 2018-04-03 and 0.3.1 dated 2018-09-28
NLMR-0.3.0/NLMR/vignettes/README-example-1.png |only NLMR-0.3.0/NLMR/vignettes/README-example-2.png |only NLMR-0.3.0/NLMR/vignettes/README-unnamed-chunk-16-1.png |only NLMR-0.3.0/NLMR/vignettes/README-unnamed-chunk-34-1.png |only NLMR-0.3.0/NLMR/vignettes/README-unnamed-chunk-4-1.png |only NLMR-0.3.0/NLMR/vignettes/README-unnamed-chunk-4-2.png |only NLMR-0.3.0/NLMR/vignettes/README-unnamed-chunk-5-1.png |only NLMR-0.3.0/NLMR/vignettes/README-unnamed-chunk-6-1.png |only NLMR-0.3.0/NLMR/vignettes/README-unnamed-chunk-7-1.png |only NLMR-0.3.0/NLMR/vignettes/README-unnamed-chunk-9-1.png |only NLMR-0.3.0/NLMR/vignettes/logo.png |only NLMR-0.3.0/NLMR/vignettes/nlmr_grid.png |only NLMR-0.3.1/NLMR/DESCRIPTION | 14 NLMR-0.3.1/NLMR/MD5 | 115 +-- NLMR-0.3.1/NLMR/NEWS.md | 26 NLMR-0.3.1/NLMR/R/NLMR.R | 44 - NLMR-0.3.1/NLMR/R/nlm_curds.R | 238 +++--- NLMR-0.3.1/NLMR/R/nlm_distancegradient.R | 178 ++-- NLMR-0.3.1/NLMR/R/nlm_edgegradient.R | 176 ++-- NLMR-0.3.1/NLMR/R/nlm_fbm.R | 208 ++--- NLMR-0.3.1/NLMR/R/nlm_gaussianfield.R | 220 +++--- NLMR-0.3.1/NLMR/R/nlm_mosaicfield.R | 4 NLMR-0.3.1/NLMR/R/nlm_mosaicgibbs.R | 232 +++--- NLMR-0.3.1/NLMR/R/nlm_mosaictess.R | 166 ++-- NLMR-0.3.1/NLMR/R/nlm_mpd.R | 9 NLMR-0.3.1/NLMR/R/nlm_neigh.R | 352 ++++----- NLMR-0.3.1/NLMR/R/nlm_percolation.R | 166 ++-- NLMR-0.3.1/NLMR/R/nlm_planargradient.R | 182 ++--- NLMR-0.3.1/NLMR/R/nlm_random.R | 132 +-- NLMR-0.3.1/NLMR/R/nlm_randomcluster.R | 4 NLMR-0.3.1/NLMR/R/nlm_randomrectangularcluster.R | 218 +++--- NLMR-0.3.1/NLMR/R/util_rescale.R | 40 - NLMR-0.3.1/NLMR/build/vignette.rds |binary NLMR-0.3.1/NLMR/inst/CITATION | 42 - NLMR-0.3.1/NLMR/inst/doc/getstarted.Rmd | 6 NLMR-0.3.1/NLMR/inst/doc/getstarted.html | 361 +++++++--- NLMR-0.3.1/NLMR/man/NLMR-package.Rd | 4 NLMR-0.3.1/NLMR/man/figures |only NLMR-0.3.1/NLMR/man/nlm_distancegradient.Rd | 3 NLMR-0.3.1/NLMR/man/nlm_mosaicfield.Rd | 5 NLMR-0.3.1/NLMR/man/nlm_mpd.Rd | 8 NLMR-0.3.1/NLMR/tests/testthat.R | 8 NLMR-0.3.1/NLMR/tests/testthat/test_curds.R | 36 NLMR-0.3.1/NLMR/tests/testthat/test_distancegradient.R | 70 - NLMR-0.3.1/NLMR/tests/testthat/test_egdegradient.R | 56 - NLMR-0.3.1/NLMR/tests/testthat/test_fBm.R | 46 - NLMR-0.3.1/NLMR/tests/testthat/test_gaussianfield.R | 40 - NLMR-0.3.1/NLMR/tests/testthat/test_lintr.R | 12 NLMR-0.3.1/NLMR/tests/testthat/test_mosaicfield.R | 98 +- NLMR-0.3.1/NLMR/tests/testthat/test_mosaicgibbs.R | 54 - NLMR-0.3.1/NLMR/tests/testthat/test_mosaictess.R | 48 - NLMR-0.3.1/NLMR/tests/testthat/test_mpd.R | 48 - NLMR-0.3.1/NLMR/tests/testthat/test_neigh.R | 100 +- NLMR-0.3.1/NLMR/tests/testthat/test_percolation.R | 44 - NLMR-0.3.1/NLMR/tests/testthat/test_planargradient.R | 54 - NLMR-0.3.1/NLMR/tests/testthat/test_random.R | 58 - NLMR-0.3.1/NLMR/tests/testthat/test_randomcluster.R | 38 - NLMR-0.3.1/NLMR/tests/testthat/test_randomrectangularcluster.R | 42 - NLMR-0.3.1/NLMR/vignettes/Citations.bib | 17 NLMR-0.3.1/NLMR/vignettes/getstarted.Rmd | 6 NLMR-0.3.1/NLMR/vignettes/getstarted_cache/html/__packages | 8 NLMR-0.3.1/NLMR/vignettes/getstarted_files/figure-html/unnamed-chunk-1-1.png |binary NLMR-0.3.1/NLMR/vignettes/getstarted_files/figure-html/unnamed-chunk-2-1.png |binary NLMR-0.3.1/NLMR/vignettes/getstarted_files/figure-html/unnamed-chunk-2-2.png |binary NLMR-0.3.1/NLMR/vignettes/getstarted_files/figure-html/unnamed-chunk-3-1.png |binary 65 files changed, 2119 insertions(+), 1917 deletions(-)
Title: A Game for Human vs. Human or Human vs. AI
Description: A game for two players: Who gets first four in a row (horizontal, vertical or diagonal) wins. As board game published by Milton Bradley, designed by Howard Wexler and Ned Strongin.
Author: Matthias Speidel [aut, cre]
Maintainer: Matthias Speidel <matthias.speidel@googlemail.com>
Diff between FourScores versions 1.0 dated 2011-11-02 and 1.5.0 dated 2018-09-28
FourScores-1.0/FourScores/R/FourScores.R |only FourScores-1.0/FourScores/man/FourScores-package.Rd |only FourScores-1.5.0/FourScores/DESCRIPTION | 24 ++++---- FourScores-1.5.0/FourScores/MD5 | 23 ++++++-- FourScores-1.5.0/FourScores/NAMESPACE |only FourScores-1.5.0/FourScores/R/FourScores46.R |only FourScores-1.5.0/FourScores/man/AImove.Rd |only FourScores-1.5.0/FourScores/man/FieldCorrect.Rd |only FourScores-1.5.0/FourScores/man/FieldGeneration.Rd |only FourScores-1.5.0/FourScores/man/FieldPlot.Rd |only FourScores-1.5.0/FourScores/man/FieldWinCheck.Rd |only FourScores-1.5.0/FourScores/man/FourScores.Rd | 57 ++++++++++---------- FourScores-1.5.0/FourScores/man/NewField.Rd |only FourScores-1.5.0/FourScores/man/clicking.Rd |only FourScores-1.5.0/FourScores/man/clickingXY.Rd |only FourScores-1.5.0/FourScores/man/fbuttons.Rd |only FourScores-1.5.0/FourScores/man/getColors.Rd |only FourScores-1.5.0/FourScores/man/getPlayerNames.Rd |only FourScores-1.5.0/FourScores/man/painter.Rd |only FourScores-1.5.0/FourScores/man/plotlogo.Rd |only FourScores-1.5.0/FourScores/man/resample.Rd |only FourScores-1.5.0/FourScores/man/typing.Rd |only 22 files changed, 63 insertions(+), 41 deletions(-)
Title: Procedures for Ecological Assessment of Surface Waters
Description: Functions for evaluating and visualizing
ecological assessment procedures for surface waters
containing physical, chemical and biological assessments
in the form of value functions.
Author: Nele Schuwirth <nele.schuwirth@eawag.ch> and Peter Reichert <peter.reichert@eawag.ch>
with contributions by Simone Langhans and Christian Michel
Maintainer: Nele Schuwirth <nele.schuwirth@eawag.ch>
Diff between ecoval versions 1.2 dated 2018-05-06 and 1.2.1 dated 2018-09-28
DESCRIPTION | 10 - MD5 | 50 +++---- R/msk.macrophytes.2017.calc.types.r | 140 +++++++++++++--------- R/msk.macrophytes.2017.doc.R | 4 R/msk.macrophytes.2017.plaus.crit.R | 84 +++++-------- R/msk.macrophytes.2017.prepare.data.R | 7 - R/msk.macrophytes.2017.read.compile.evaluate.R | 94 +++++++------- R/msk.morphol.1998.r | 14 +- data/ecoval_data.RData |binary inst/NEWS | 18 ++ inst/ecoval.dictionaries.default.dat | 2 man/ecoval-package.Rd | 8 - man/figures/lakemorphol2016.pdf |binary man/figures/lakemorphol2016French.pdf |binary man/figures/lakemorphol2016German.pdf |binary man/msk.macrophytes.2017.calc.types.Rd | 9 - man/msk.macrophytes.2017.create.Rd | 9 - man/msk.macrophytes.2017.doc.site.Rd | 20 +-- man/msk.macrophytes.2017.doc.typology.Rd | 22 +-- man/msk.macrophytes.2017.doc.valuation.Rd | 21 +-- man/msk.macrophytes.2017.doc.vegetation.Rd | 21 +-- man/msk.macrophytes.2017.plot.hierarchy.Rd | 9 - man/msk.macrophytes.2017.plot.typedef.Rd | 9 - man/msk.macrophytes.2017.plot.types.grfo.Rd | 9 - man/msk.macrophytes.2017.plot.types.scheme.Rd | 9 - man/msk.macrophytes.2017.read.compile.evaluate.Rd | 9 - 26 files changed, 314 insertions(+), 264 deletions(-)
Title: Phylogenetic Tools for Comparative Biology (and Other Things)
Description: A wide range of functions for phylogenetic analysis. Functionality is concentrated in phylogenetic comparative biology, but also includes a diverse array of methods for visualizing, manipulating, reading or writing, and even inferring phylogenetic trees and data. Included among the functions in phylogenetic comparative biology are various for ancestral state reconstruction, model-fitting, simulation of phylogenies and data, and multivariate analysis. There are a broad range of plotting methods for phylogenies and comparative data which include, but are not restricted to, methods for mapping trait evolution on trees, for projecting trees into phenotypic space or a geographic map, and for visualizing correlated speciation between trees. Finally, there are a number of functions for reading, writing, analyzing, inferring, simulating, and manipulating phylogenetic trees and comparative data not covered by other packages. For instance, there are functions for randomly or non-randomly attaching species or clades to a phylogeny, for estimating supertrees or consensus phylogenies from a set, for simulating trees and phylogenetic data under a range of models, and for a wide variety of other manipulations and analyses that phylogenetic biologists might find useful in their research.
Author: Liam J. Revell
Maintainer: Liam J. Revell <liam.revell@umb.edu>
Diff between phytools versions 0.6-44 dated 2017-11-12 and 0.6-60 dated 2018-09-28
phytools-0.6-44/phytools/man/expm.Rd |only phytools-0.6-60/phytools/DESCRIPTION | 16 - phytools-0.6-60/phytools/MD5 | 78 ++++--- phytools-0.6-60/phytools/NAMESPACE | 38 ++- phytools-0.6-60/phytools/R/Dtest.R |only phytools-0.6-60/phytools/R/anc.ML.R | 24 +- phytools-0.6-60/phytools/R/collapseTree.R | 163 ++++++++------- phytools-0.6-60/phytools/R/cophylo.R | 17 + phytools-0.6-60/phytools/R/ctt.R |only phytools-0.6-60/phytools/R/densityTree.R | 2 phytools-0.6-60/phytools/R/drop.tip.simmap.R | 16 - phytools-0.6-60/phytools/R/fitMk.R | 78 +++++++ phytools-0.6-60/phytools/R/fitmultiMk.R |only phytools-0.6-60/phytools/R/locate.yeti.R | 8 phytools-0.6-60/phytools/R/ltt.R | 46 ++++ phytools-0.6-60/phytools/R/make.simmap.R | 8 phytools-0.6-60/phytools/R/mcmcMk.R |only phytools-0.6-60/phytools/R/multi.mantel.R | 45 +++- phytools-0.6-60/phytools/R/pbtree.R | 7 phytools-0.6-60/phytools/R/phyl.pairedttest.R | 114 ++++++++--- phytools-0.6-60/phytools/R/phylomorphospace.R | 33 ++- phytools-0.6-60/phytools/R/phylomorphospace3d.R | 4 phytools-0.6-60/phytools/R/plotTree.datamatrix.R |only phytools-0.6-60/phytools/R/plotTree.wBars.R | 185 ++++++++++-------- phytools-0.6-60/phytools/R/project.phylomorphospace.R |only phytools-0.6-60/phytools/R/rerootingMethod.R | 4 phytools-0.6-60/phytools/R/threshBayes.R | 6 phytools-0.6-60/phytools/R/utilities.R | 60 ++--- phytools-0.6-60/phytools/man/Dtest.Rd |only phytools-0.6-60/phytools/man/collapseTree.Rd | 4 phytools-0.6-60/phytools/man/ctt.Rd |only phytools-0.6-60/phytools/man/export.as.xml.Rd | 2 phytools-0.6-60/phytools/man/fitMk.Rd | 18 + phytools-0.6-60/phytools/man/locate.fossil.Rd | 4 phytools-0.6-60/phytools/man/locate.yeti.Rd | 2 phytools-0.6-60/phytools/man/ltt.Rd | 11 - phytools-0.6-60/phytools/man/multi.mantel.Rd | 8 phytools-0.6-60/phytools/man/phyl.pairedttest.Rd | 15 - phytools-0.6-60/phytools/man/phylomorphospace.Rd | 8 phytools-0.6-60/phytools/man/plotTree.datamatrix.Rd |only phytools-0.6-60/phytools/man/plotTree.wBars.Rd | 4 phytools-0.6-60/phytools/man/ratebytree.Rd | 6 phytools-0.6-60/phytools/man/rerootingMethod.Rd | 2 phytools-0.6-60/phytools/man/sim.history.Rd | 28 +- phytools-0.6-60/phytools/man/threshBayes.Rd | 4 45 files changed, 718 insertions(+), 350 deletions(-)
Title: Maximum Projection Designs
Description: Generate maximum projection (MaxPro) designs for quantitative and/or qualitative factors. Details of the MaxPro criterion can be found in: (1) Joseph, Gul, and Ba. (2015) "Maximum Projection Designs for Computer Experiments", Biometrika, 102, 371-380, and (2) Joseph, Gul, and Ba. (2018) "Designing Computer Experiments with Multiple Types of Factors: The MaxPro Approach", Journal of Quality Technology, to appear.
Author: Shan Ba and V. Roshan Joseph
Maintainer: Shan Ba <shanbatr@gmail.com>
Diff between MaxPro versions 3.1-1 dated 2015-01-27 and 4.1-2 dated 2018-09-28
MaxPro-3.1-1/MaxPro/R/MaxProImproveLHD.R |only MaxPro-3.1-1/MaxPro/man/MaxProImproveLHD.Rd |only MaxPro-4.1-2/MaxPro/DESCRIPTION | 10 MaxPro-4.1-2/MaxPro/MD5 | 29 MaxPro-4.1-2/MaxPro/NAMESPACE | 5 MaxPro-4.1-2/MaxPro/R/CandPoints.R |only MaxPro-4.1-2/MaxPro/R/MaxPro.R | 2 MaxPro-4.1-2/MaxPro/R/MaxProAugment.R |only MaxPro-4.1-2/MaxPro/R/MaxProLHD.R | 2 MaxPro-4.1-2/MaxPro/R/MaxProMeasure.R |only MaxPro-4.1-2/MaxPro/R/MaxProQQ.R |only MaxPro-4.1-2/MaxPro/R/MaxProRunOrder.R |only MaxPro-4.1-2/MaxPro/man/CandPoints.Rd |only MaxPro-4.1-2/MaxPro/man/MaxPro-package.Rd | 12 MaxPro-4.1-2/MaxPro/man/MaxPro.Rd | 9 MaxPro-4.1-2/MaxPro/man/MaxProAugment.Rd |only MaxPro-4.1-2/MaxPro/man/MaxProLHD.Rd | 11 MaxPro-4.1-2/MaxPro/man/MaxProMeasure.Rd |only MaxPro-4.1-2/MaxPro/man/MaxProQQ.Rd |only MaxPro-4.1-2/MaxPro/man/MaxProRunOrder.Rd |only MaxPro-4.1-2/MaxPro/src/MaxPro.cpp | 1402 +++++++++++++++--------- MaxPro-4.1-2/MaxPro/src/registerDynamicSymbol.c |only 22 files changed, 972 insertions(+), 510 deletions(-)
Title: Build Error Correction Models
Description: Functions for easy building of error correction models (ECM) for time series regression.
Author: Gaurav Bansal
Maintainer: Gaurav Bansal <gaurbans@gmail.com>
Diff between ecm versions 4.2.0 dated 2018-07-07 and 4.3.0 dated 2018-09-28
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- R/ecmaveback.r | 13 ++++++++----- R/ecmback.r | 11 +++++++---- man/ecmave.Rd | 4 ++-- man/lmave.Rd | 3 ++- 6 files changed, 28 insertions(+), 21 deletions(-)