Title: Miscellaneous Basic Functions
Description: A collection of miscellaneous functions for
copying objects to the clipboard ('Copy');
manipulating strings ('concat', 'mgsub', 'trim', 'verlan');
loading or showing packages ('library_with_dep', 'require_with_dep',
'sessionPackages');
creating or testing for named lists ('nlist', 'as.nlist', 'is.nlist'),
formulas ('is.formula'), empty objects ('as.empty', 'is.empty'),
whole numbers ('as.wholenumber', 'is.wholenumber');
testing for equality ('almost.equal', 'almost.zero') and computing
uniqueness ('almost.unique');
getting modified versions of usual functions ('rle2', 'sumNA');
making a pause or a stop ('pause', 'stopif');
converting into a function ('as.fun');
providing a C like ternary operator ('condition %?% true %:% false');
finding packages and functions ('get_all_pkgs', 'get_all_funs');
and others ('erase', '%nin%', 'unwhich', 'top', 'bot', 'normalize').
Author: Paul Poncet [aut, cre]
Maintainer: Paul Poncet <paulponcet@yahoo.fr>
Diff between bazar versions 1.0.9 dated 2018-07-31 and 1.0.10 dated 2018-10-06
DESCRIPTION | 8 ++++---- MD5 | 8 +++++--- NAMESPACE | 4 ++++ NEWS.md | 43 ++++++++++++++----------------------------- R/as.na.R |only man/as.na.Rd |only 6 files changed, 27 insertions(+), 36 deletions(-)
Title: Functions to Analyze Single System Data
Description: Functions to visually and statistically analyze single system data.
Author: Charles Auerbach [aut, cre],
Wendy Zeitlin [aut]
Maintainer: Charles Auerbach <auerbach@yu.edu>
Diff between SSDforR versions 1.4.20 dated 2018-09-25 and 1.4.21 dated 2018-10-06
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NAMESPACE | 4 +++- R/metareg.R | 3 ++- 4 files changed, 11 insertions(+), 8 deletions(-)
Title: Using R to Install Stuff (Such As: R, 'Rtools', 'RStudio',
'Git', and More!)
Description: R is great for installing software. Through the 'installr'
package you can automate the updating of R (on Windows, using updateR())
and install new software. Software installation is initiated through a
GUI (just run installr()), or through functions such as: install.Rtools(),
install.pandoc(), install.git(), and many more. The updateR() command
performs the following: finding the latest R version, downloading it,
running the installer, deleting the installation file, copy and updating
old packages to the new R installation.
Author: Tal Galili [aut, cre, cph] (http://www.r-statistics.com),
Barry Rowlingson [ctb],
Boris Hejblum [ctb],
Dason [ctb],
Felix Schonbrodt [ctb],
G. Grothendieck [ctb],
GERGELY DAROCZI [ctb],
Heuristic Andrew [ctb],
James [ctb] (http://stackoverflow.com/users/269476/james),
Thomas Leeper [ctb] (http://thomasleeper.com/),
VitoshKa [ctb],
Yihui Xie [ctb] (http://yihui.name),
Michael Friendly [ctb] (http://datavis.ca/),
Kornelius Rohmeyer [ctb] (http://algorithm-forge.com/techblog/),
Dieter Menne [ctb],
Tyler Hunt [ctb] (https://github.com/JackStat),
Takekatsu Hiramura [ctb] (https://github.com/hiratake55),
Berry Boessenkool [ctb] (https://github.com/BerryBoessenkool),
Jonathan Godfrey [ctb] (https://github.com/ajrgodfrey),
Tom Allard [ctb],
ChingChuan Chen [ctb],
Jonathan Hill [ctb],
Chan-Yub Park [ctb] (https://github.com/mrchypark)
Maintainer: Tal Galili <tal.galili@gmail.com>
Diff between installr versions 0.20.0 dated 2018-05-02 and 0.21.0 dated 2018-10-06
ChangeLog | 5513 +++++++++++++++++++++++--------------------------- DESCRIPTION | 13 MD5 | 32 NAMESPACE | 6 NEWS | 16 NEWS.md | 21 R/geo_functions.R | 3 R/install.R | 6 R/installConda.R | 21 R/installNodejs.R | 7 R/installOpenJdk.R |only R/installPython.R | 12 README.md | 2 man/freegeoip.Rd | 2 man/install.conda.Rd | 6 man/install.java.Rd |only man/install.nodejs.Rd | 2 man/install.python.Rd | 8 18 files changed, 2676 insertions(+), 2994 deletions(-)
Title: Coalition Probabilities in Multi-Party Democracies
Description: An implementation of a MCMC method to calculate
probabilities for a coalition majority based on survey results,
see Bender and Bauer (2018) <doi:10.21105/joss.00606>.
Author: Andreas Bender [aut, cre] (<https://orcid.org/0000-0001-5628-8611>),
Alexander Bauer [aut] (<https://orcid.org/0000-0003-3495-5131>)
Maintainer: Andreas Bender <andreas.bender@stat.uni-muenchen.de>
Diff between coalitions versions 0.6.4 dated 2018-08-27 and 0.6.5 dated 2018-10-06
DESCRIPTION | 8 - MD5 | 40 ++++----- NAMESPACE | 3 NEWS.md | 5 + R/scrapers.R | 39 ++++++++- build/vignette.rds |binary inst/doc/diagnostic.html | 20 ++-- inst/doc/pooling.html | 4 inst/doc/workflow.html | 172 ++++++++++++++++++++--------------------- man/calculate_probs.Rd | 4 man/collapse_parties.Rd | 4 man/filter_superior.Rd | 12 ++ man/get_probabilities.Rd | 10 +- man/get_seats.Rd | 4 man/get_surveys.Rd | 2 man/have_majority.Rd | 6 - man/pool_austria.Rd | 10 ++ man/pool_surveys.Rd | 8 - man/redistribute.Rd | 3 man/scrape.Rd | 26 ++---- tests/testthat/test-scrapers.R | 117 ++++++++++++++------------- 21 files changed, 277 insertions(+), 220 deletions(-)
Title: Scale-Dependent Hyperpriors in Structured Additive
Distributional Regression
Description: Utility functions for scale-dependent and alternative hyperpriors. The distribution parameters may capture location, scale, shape, etc. and every parameter may depend
on complex additive terms (fixed, random, smooth, spatial, etc.) similar to a generalized additive model. Hyperpriors for all effects can be elicitated within the package. Including complex tensor product interaction terms and variable selection priors. The basic model is explained in in Klein and Kneib (2016) <doi:10.1214/15-BA983>.
Author: Nadja Klein [aut, cre]
Maintainer: Nadja Klein <nadja.klein@hu-berlin.de>
Diff between sdPrior versions 0.6 dated 2018-07-07 and 1.0-0 dated 2018-10-06
DESCRIPTION | 14 ++++++-------- MD5 | 6 +++--- R/hyperpar_mod.r | 2 +- man/hyperpar_mod.Rd | 2 +- 4 files changed, 11 insertions(+), 13 deletions(-)
More information about radiant.multivariate at CRAN
Permanent link
Title: Managing Larger Data on a GitHub Repository
Description: Because larger (> 50 MB) data files cannot easily be committed to git,
a different approach is required to manage data associated with an analysis in a
GitHub repository. This package provides a simple work-around by allowing larger
(up to 2 GB) data files to piggyback on a repository as assets attached to individual
GitHub releases. These files are not handled by git in any way, but instead are
uploaded, downloaded, or edited directly by calls through the GitHub API. These
data files can be versioned manually by creating different releases. This approach
works equally well with public or private repositories. Data can be uploaded
and downloaded programmatically from scripts. No authentication is required to
download data from public repositories.
Author: Carl Boettiger [aut, cre, cph]
(<https://orcid.org/0000-0002-1642-628X>),
Mark Padgham [ctb] (<https://orcid.org/0000-0003-2172-5265>)
Maintainer: Carl Boettiger <cboettig@gmail.com>
Diff between piggyback versions 0.0.7 dated 2018-09-30 and 0.0.8 dated 2018-10-06
DESCRIPTION | 6 +- MD5 | 32 +++++++------- NEWS.md | 8 +++ R/pb_info.R | 11 +++-- R/pb_list.R | 2 R/utils.R | 26 ++++++++++++ README.md | 77 ++++++++++++++++++++++++++++-------- inst/doc/alternatives.html | 4 - inst/doc/intro.Rmd | 16 +++++++ inst/doc/intro.html | 75 +++++++++++++++++++---------------- man/figures |only tests/testthat/test-errors.R | 79 +++++++++++++++++++++---------------- tests/testthat/test-gh.R | 7 ++- tests/testthat/test-on-cran.R | 2 tests/testthat/test-with-auth.R | 6 +- tests/testthat/test-without-auth.R | 77 ++++++++++++++---------------------- tests/testthat/test-zzz-teardown.R |only vignettes/intro.Rmd | 16 +++++++ 18 files changed, 284 insertions(+), 160 deletions(-)
Title: Optimal Designs for the 5-Parameter Logistic Model
Description: Obtain and evaluate various optimal designs for the 3, 4, and 5-parameter logistic models. The optimal designs are obtained based on the numerical algorithm in Hyun, Wong, Yang (2018) <doi:10.18637/jss.v083.i05>.
Author: Seung Won Hyun, Weng Kee Wong, and Yarong Yang
Maintainer: Seung Won Hyun <yellowatom09@gmail.com>
Diff between Opt5PL versions 0.1.0 dated 2018-09-30 and 0.1.1 dated 2018-10-06
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- R/Deff.R | 2 +- R/Dseff.R | 18 +++++++++--------- R/EDpeff.R | 24 ++++++++++++------------ 5 files changed, 29 insertions(+), 29 deletions(-)
Title: Matrix Computation Based Identification of Prime Implicants
Description: Computes the prime implicants or a minimal disjunctive normal form for a
logic expression presented by a truth table or a logic tree. Has been particularly
developed for logic expressions resulting from a logic regression analysis, i.e.
logic expressions typically consisting of up to 16 literals, where the prime implicants
are typically composed of a maximum of 4 or 5 literals.
Author: Holger Schwender
Maintainer: Holger Schwender <holger.schw@gmx.de>
Diff between mcbiopi versions 1.1.5 dated 2018-09-15 and 1.1.6 dated 2018-10-06
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- R/getPImps.R | 4 ++-- 3 files changed, 8 insertions(+), 8 deletions(-)
Title: Structural Equation and Twin Modeling in R
Description: Quickly create, run, and report structural equation and twin models.
See '?umx' for help, and file.show(system.file("NEWS", package="umx")) for NEWS.
Author: Timothy C Bates [aut, cre] (<https://orcid.org/0000-0002-1153-9007>)
Maintainer: Timothy C Bates <timothy.c.bates@gmail.com>
Diff between umx versions 2.8.0 dated 2018-06-19 and 2.8.5 dated 2018-10-06
umx-2.8.0/umx/NEWS |only umx-2.8.0/umx/R/model_builders.r |only umx-2.8.0/umx/R/polychoricMatrix3.R |only umx-2.8.0/umx/R/umxACEcov_fixed.R |only umx-2.8.0/umx/R/umxACEv.R |only umx-2.8.0/umx/R/umxGxEbiv.R |only umx-2.8.0/umx/R/umxPlotCPnew.R |only umx-2.8.0/umx/R/umxSexLim.R |only umx-2.8.0/umx/R/umxSimplex.R |only umx-2.8.0/umx/R/uxm_stash_CIs.R |only umx-2.8.5/umx/DESCRIPTION | 16 umx-2.8.5/umx/MD5 | 507 ++++++++-------- umx-2.8.5/umx/NAMESPACE | 3 umx-2.8.5/umx/NEWS.md |only umx-2.8.5/umx/R/build_run_modify.r | 217 +++--- umx-2.8.5/umx/R/datasets.R | 2 umx-2.8.5/umx/R/deprecated.r | 6 umx-2.8.5/umx/R/fit_and_reporting.r | 488 +++++++-------- umx-2.8.5/umx/R/misc_and_utility.r | 389 +++++++----- umx-2.8.5/umx/R/tmx.r | 2 umx-2.8.5/umx/R/umx_build_high_level_models.r |only umx-2.8.5/umx/R/umx_build_polychoricMatrix3.R |only umx-2.8.5/umx/R/umx_build_umxACEcov_fixed.R |only umx-2.8.5/umx/R/umx_build_umxACEv.R |only umx-2.8.5/umx/R/umx_build_umxGxEbiv.R |only umx-2.8.5/umx/R/umx_build_umxSexLim.R |only umx-2.8.5/umx/R/umx_build_umxSimplex.R |only umx-2.8.5/umx/R/umx_fit_stash_CIs.R |only umx-2.8.5/umx/R/umx_fit_umxFitIndices.r |only umx-2.8.5/umx/R/umx_fit_umxPlotCPnew.R |only umx-2.8.5/umx/R/xmu.r | 99 ++- umx-2.8.5/umx/R/xmu_make_top.R | 17 umx-2.8.5/umx/README.md | 2 umx-2.8.5/umx/inst/WORDLIST | 1 umx-2.8.5/umx/man/GFF.Rd | 1 umx-2.8.5/umx/man/RMSEA.MxModel.Rd | 4 umx-2.8.5/umx/man/RMSEA.Rd | 3 umx-2.8.5/umx/man/RMSEA.summary.mxmodel.Rd | 1 umx-2.8.5/umx/man/dl_from_dropbox.Rd | 3 umx-2.8.5/umx/man/extractAIC.MxModel.Rd | 3 umx-2.8.5/umx/man/figures/ACEv.pdf |only umx-2.8.5/umx/man/figures/CP.pdf |binary umx-2.8.5/umx/man/figures/CP.png |binary umx-2.8.5/umx/man/figures/IP.pdf |only umx-2.8.5/umx/man/figures/IP.png |binary umx-2.8.5/umx/man/figures/umx_help_figures.graffle |binary umx-2.8.5/umx/man/install.OpenMx.Rd | 8 umx-2.8.5/umx/man/iqdat.Rd | 1 umx-2.8.5/umx/man/loadings.MxModel.Rd | 4 umx-2.8.5/umx/man/loadings.Rd | 3 umx-2.8.5/umx/man/plot.MxModel.Rd | 12 umx-2.8.5/umx/man/qm.Rd | 1 umx-2.8.5/umx/man/reliability.Rd | 1 umx-2.8.5/umx/man/residuals.MxModel.Rd | 3 umx-2.8.5/umx/man/tmx_genotypic_effect.Rd | 7 umx-2.8.5/umx/man/tmx_is.identified.Rd | 5 umx-2.8.5/umx/man/umx-deprecated.Rd | 3 umx-2.8.5/umx/man/umx.Rd | 30 umx-2.8.5/umx/man/umxACE.Rd | 21 umx-2.8.5/umx/man/umxACE_cov_fixed.Rd | 10 umx-2.8.5/umx/man/umxACEcov.Rd | 8 umx-2.8.5/umx/man/umxACEv.Rd | 3 umx-2.8.5/umx/man/umxAPA.Rd | 17 umx-2.8.5/umx/man/umxAdd1.Rd | 6 umx-2.8.5/umx/man/umxAlgebra.Rd | 4 umx-2.8.5/umx/man/umxBrownie.Rd | 1 umx-2.8.5/umx/man/umxCI.Rd | 5 umx-2.8.5/umx/man/umxCI_boot.Rd | 11 umx-2.8.5/umx/man/umxCP.Rd | 7 umx-2.8.5/umx/man/umxCPold.Rd | 14 umx-2.8.5/umx/man/umxCompare.Rd | 9 umx-2.8.5/umx/man/umxConfint.Rd | 8 umx-2.8.5/umx/man/umxCov2cor.Rd | 3 umx-2.8.5/umx/man/umxCovData.Rd | 1 umx-2.8.5/umx/man/umxDiagnose.Rd | 3 umx-2.8.5/umx/man/umxDrop1.Rd | 3 umx-2.8.5/umx/man/umxEFA.Rd | 13 umx-2.8.5/umx/man/umxEquate.Rd | 7 umx-2.8.5/umx/man/umxEval.Rd | 6 umx-2.8.5/umx/man/umxExpCov.Rd | 8 umx-2.8.5/umx/man/umxExpMeans.Rd | 3 umx-2.8.5/umx/man/umxFactor.Rd | 6 umx-2.8.5/umx/man/umxFactorScores.Rd | 4 umx-2.8.5/umx/man/umxFitIndices.Rd | 5 umx-2.8.5/umx/man/umxFixAll.Rd | 3 umx-2.8.5/umx/man/umxGetParameters.Rd | 9 umx-2.8.5/umx/man/umxGxE.Rd | 1 umx-2.8.5/umx/man/umxGxE_window.Rd | 4 umx-2.8.5/umx/man/umxGxEbiv.Rd | 3 umx-2.8.5/umx/man/umxHetCor.Rd | 9 umx-2.8.5/umx/man/umxIP.Rd | 12 umx-2.8.5/umx/man/umxIPnew.Rd | 12 umx-2.8.5/umx/man/umxJiggle.Rd | 3 umx-2.8.5/umx/man/umxLabel.Rd | 9 umx-2.8.5/umx/man/umxLatent.Rd | 9 umx-2.8.5/umx/man/umxMI.Rd | 3 umx-2.8.5/umx/man/umxMatrix.Rd | 10 umx-2.8.5/umx/man/umxModel.Rd | 2 umx-2.8.5/umx/man/umxModify.Rd | 8 umx-2.8.5/umx/man/umxPadAndPruneForDefVars.Rd | 7 umx-2.8.5/umx/man/umxPath.Rd | 19 umx-2.8.5/umx/man/umxPlotACE.Rd | 3 umx-2.8.5/umx/man/umxPlotACEcov.Rd | 3 umx-2.8.5/umx/man/umxPlotACEv.Rd | 6 umx-2.8.5/umx/man/umxPlotCP.Rd | 8 umx-2.8.5/umx/man/umxPlotCPnew.Rd | 5 umx-2.8.5/umx/man/umxPlotGxE.Rd | 8 umx-2.8.5/umx/man/umxPlotGxEbiv.Rd | 9 umx-2.8.5/umx/man/umxPlotIP.Rd | 8 umx-2.8.5/umx/man/umxPlotSimplex.Rd | 3 umx-2.8.5/umx/man/umxRAM.Rd | 19 umx-2.8.5/umx/man/umxRAM2Ordinal.Rd | 6 umx-2.8.5/umx/man/umxReduce.Rd | 24 umx-2.8.5/umx/man/umxReduceACE.Rd | 9 umx-2.8.5/umx/man/umxReduceGxE.Rd | 31 umx-2.8.5/umx/man/umxRun.Rd | 8 umx-2.8.5/umx/man/umxSetParameters.Rd | 1 umx-2.8.5/umx/man/umxSexLim.Rd | 15 umx-2.8.5/umx/man/umxSimplex.Rd | 8 umx-2.8.5/umx/man/umxSummary.MxModel.Rd | 5 umx-2.8.5/umx/man/umxSummary.Rd | 4 umx-2.8.5/umx/man/umxSummaryACE.Rd | 8 umx-2.8.5/umx/man/umxSummaryACEcov.Rd | 7 umx-2.8.5/umx/man/umxSummaryACEv.Rd | 10 umx-2.8.5/umx/man/umxSummaryCP.Rd | 7 umx-2.8.5/umx/man/umxSummaryGxE.Rd | 11 umx-2.8.5/umx/man/umxSummaryGxEbiv.Rd | 11 umx-2.8.5/umx/man/umxSummaryIP.Rd | 3 umx-2.8.5/umx/man/umxSummarySexLim.Rd | 10 umx-2.8.5/umx/man/umxSummarySimplex.Rd | 10 umx-2.8.5/umx/man/umxSuperModel.Rd | 21 umx-2.8.5/umx/man/umxThresholdMatrix.Rd | 7 umx-2.8.5/umx/man/umxTwoStage.Rd | 7 umx-2.8.5/umx/man/umxUnexplainedCausalNexus.Rd | 3 umx-2.8.5/umx/man/umxValues.Rd | 3 umx-2.8.5/umx/man/umxVersion.Rd | 4 umx-2.8.5/umx/man/umxWeightedAIC.Rd |only umx-2.8.5/umx/man/umx_APA_model_CI.Rd | 16 umx-2.8.5/umx/man/umx_APA_pval.Rd | 4 umx-2.8.5/umx/man/umx_add_variances.Rd | 3 umx-2.8.5/umx/man/umx_aggregate.Rd | 23 umx-2.8.5/umx/man/umx_apply.Rd | 16 umx-2.8.5/umx/man/umx_array_shift.Rd | 1 umx-2.8.5/umx/man/umx_as_numeric.Rd | 3 umx-2.8.5/umx/man/umx_cell_is_on.Rd | 1 umx-2.8.5/umx/man/umx_check.Rd | 3 umx-2.8.5/umx/man/umx_check_OS.Rd | 1 umx-2.8.5/umx/man/umx_check_model.Rd | 3 umx-2.8.5/umx/man/umx_check_names.Rd | 8 umx-2.8.5/umx/man/umx_check_parallel.Rd | 27 umx-2.8.5/umx/man/umx_cont_2_quantiles.Rd | 7 umx-2.8.5/umx/man/umx_cor.Rd | 3 umx-2.8.5/umx/man/umx_cov2raw.Rd | 3 umx-2.8.5/umx/man/umx_default_option.Rd | 3 umx-2.8.5/umx/man/umx_drop_ok.Rd | 3 umx-2.8.5/umx/man/umx_explode.Rd | 3 umx-2.8.5/umx/man/umx_explode_twin_names.Rd | 1 umx-2.8.5/umx/man/umx_find_object.Rd | 1 umx-2.8.5/umx/man/umx_fix_first_loadings.Rd | 3 umx-2.8.5/umx/man/umx_fix_latents.Rd | 3 umx-2.8.5/umx/man/umx_fun_mean_sd.Rd | 1 umx-2.8.5/umx/man/umx_get_bracket_addresses.Rd | 3 umx-2.8.5/umx/man/umx_get_checkpoint.Rd | 3 umx-2.8.5/umx/man/umx_get_options.Rd | 1 umx-2.8.5/umx/man/umx_graphviz_rank.Rd | 1 umx-2.8.5/umx/man/umx_grep.Rd | 3 umx-2.8.5/umx/man/umx_has_CIs.Rd | 3 umx-2.8.5/umx/man/umx_has_been_run.Rd | 3 umx-2.8.5/umx/man/umx_has_means.Rd | 3 umx-2.8.5/umx/man/umx_has_square_brackets.Rd | 3 umx-2.8.5/umx/man/umx_is_MxData.Rd | 3 umx-2.8.5/umx/man/umx_is_MxMatrix.Rd | 3 umx-2.8.5/umx/man/umx_is_MxModel.Rd | 3 umx-2.8.5/umx/man/umx_is_RAM.Rd | 3 umx-2.8.5/umx/man/umx_is_class.Rd | 1 umx-2.8.5/umx/man/umx_is_cov.Rd | 3 umx-2.8.5/umx/man/umx_is_endogenous.Rd | 3 umx-2.8.5/umx/man/umx_is_exogenous.Rd | 3 umx-2.8.5/umx/man/umx_is_numeric.Rd | 1 umx-2.8.5/umx/man/umx_is_ordered.Rd | 3 umx-2.8.5/umx/man/umx_long2wide.Rd | 34 - umx-2.8.5/umx/man/umx_lower2full.Rd | 11 umx-2.8.5/umx/man/umx_make.Rd | 6 umx-2.8.5/umx/man/umx_make_MR_data.Rd | 5 umx-2.8.5/umx/man/umx_make_TwinData.Rd | 13 umx-2.8.5/umx/man/umx_make_bin_cont_pair_data.Rd | 3 umx-2.8.5/umx/man/umx_make_fake_data.Rd | 1 umx-2.8.5/umx/man/umx_make_sql_from_excel.Rd | 3 umx-2.8.5/umx/man/umx_mat2dot.Rd | 6 umx-2.8.5/umx/man/umx_means.Rd | 1 umx-2.8.5/umx/man/umx_merge_CIs.Rd | 3 umx-2.8.5/umx/man/umx_move_file.Rd | 1 umx-2.8.5/umx/man/umx_msg.Rd | 3 umx-2.8.5/umx/man/umx_names.Rd | 51 + umx-2.8.5/umx/man/umx_object_as_str.Rd | 3 umx-2.8.5/umx/man/umx_open.Rd | 1 umx-2.8.5/umx/man/umx_open_CRAN_page.Rd | 1 umx-2.8.5/umx/man/umx_pad.Rd | 1 umx-2.8.5/umx/man/umx_parameters.Rd | 12 umx-2.8.5/umx/man/umx_paste_names.Rd | 3 umx-2.8.5/umx/man/umx_pb_note.Rd | 1 umx-2.8.5/umx/man/umx_polychoric.Rd | 3 umx-2.8.5/umx/man/umx_polypairwise.Rd | 3 umx-2.8.5/umx/man/umx_polytriowise.Rd | 3 umx-2.8.5/umx/man/umx_print.Rd | 13 umx-2.8.5/umx/man/umx_r_test.Rd | 1 umx-2.8.5/umx/man/umx_read_lower.Rd | 5 umx-2.8.5/umx/man/umx_rename.Rd | 25 umx-2.8.5/umx/man/umx_rename_file.Rd | 3 umx-2.8.5/umx/man/umx_reorder.Rd | 3 umx-2.8.5/umx/man/umx_residualize.Rd | 3 umx-2.8.5/umx/man/umx_rot.Rd | 3 umx-2.8.5/umx/man/umx_round.Rd | 3 umx-2.8.5/umx/man/umx_scale.Rd | 3 umx-2.8.5/umx/man/umx_scale_wide_twin_data.Rd | 3 umx-2.8.5/umx/man/umx_set_auto_plot.Rd | 3 umx-2.8.5/umx/man/umx_set_auto_run.Rd | 3 umx-2.8.5/umx/man/umx_set_checkpoint.Rd | 3 umx-2.8.5/umx/man/umx_set_condensed_slots.Rd | 3 umx-2.8.5/umx/man/umx_set_cores.Rd | 3 umx-2.8.5/umx/man/umx_set_optimization_options.Rd | 3 umx-2.8.5/umx/man/umx_set_optimizer.Rd | 3 umx-2.8.5/umx/man/umx_set_plot_file_suffix.Rd | 3 umx-2.8.5/umx/man/umx_set_plot_format.Rd | 3 umx-2.8.5/umx/man/umx_set_table_format.Rd | 3 umx-2.8.5/umx/man/umx_show.Rd | 9 umx-2.8.5/umx/man/umx_show_fit_or_comparison.Rd | 4 umx-2.8.5/umx/man/umx_stack.Rd | 4 umx-2.8.5/umx/man/umx_standardize.Rd | 2 umx-2.8.5/umx/man/umx_standardize_ACE.Rd | 3 umx-2.8.5/umx/man/umx_standardize_ACEcov.Rd | 3 umx-2.8.5/umx/man/umx_standardize_ACEv.Rd | 5 umx-2.8.5/umx/man/umx_standardize_CP.Rd | 3 umx-2.8.5/umx/man/umx_standardize_IP.Rd | 3 umx-2.8.5/umx/man/umx_standardize_RAM.Rd | 3 umx-2.8.5/umx/man/umx_standardize_Simplex.Rd | 5 umx-2.8.5/umx/man/umx_stash_CIs.Rd | 6 umx-2.8.5/umx/man/umx_string_to_algebra.Rd | 3 umx-2.8.5/umx/man/umx_swap_a_block.Rd | 1 umx-2.8.5/umx/man/umx_time.Rd | 10 umx-2.8.5/umx/man/umx_trim.Rd | 3 umx-2.8.5/umx/man/umx_var.Rd | 7 umx-2.8.5/umx/man/umx_wide2long.Rd | 3 umx-2.8.5/umx/man/umx_write_to_clipboard.Rd | 2 umx-2.8.5/umx/man/us_skinfold_data.Rd | 1 umx-2.8.5/umx/man/xmuHasSquareBrackets.Rd | 2 umx-2.8.5/umx/man/xmuLabel_MATRIX_Model.Rd | 2 umx-2.8.5/umx/man/xmuLabel_Matrix.Rd | 6 umx-2.8.5/umx/man/xmuLabel_RAM_Model.Rd | 2 umx-2.8.5/umx/man/xmuMI.Rd | 2 umx-2.8.5/umx/man/xmuMakeDeviationThresholdsMatrices.Rd | 2 umx-2.8.5/umx/man/xmuMakeOneHeadedPathsFromPathList.Rd | 2 umx-2.8.5/umx/man/xmuMakeThresholdsMatrices.Rd | 2 umx-2.8.5/umx/man/xmuMakeTwoHeadedPathsFromPathList.Rd | 2 umx-2.8.5/umx/man/xmuMaxLevels.Rd | 2 umx-2.8.5/umx/man/xmuMinLevels.Rd | 2 umx-2.8.5/umx/man/xmuPropagateLabels.Rd | 2 umx-2.8.5/umx/man/xmu_check_levels_identical.Rd | 2 umx-2.8.5/umx/man/xmu_dot_make_paths.Rd | 6 umx-2.8.5/umx/man/xmu_dot_make_residuals.Rd | 6 umx-2.8.5/umx/man/xmu_dot_maker.Rd | 1 umx-2.8.5/umx/man/xmu_make_mxData.Rd |only umx-2.8.5/umx/man/xmu_make_top.Rd | 12 umx-2.8.5/umx/man/xmu_simplex_corner.Rd | 4 umx-2.8.5/umx/man/xmu_start_value_list.Rd | 2 umx-2.8.5/umx/man/xmu_twin_check.Rd | 2 umx-2.8.5/umx/tests/testthat/test_umx_is_RAM.r | 2 267 files changed, 1848 insertions(+), 1209 deletions(-)
Title: Export Emissions to Atmospheric Models
Description: Emissions are the mass of pollutants released into the atmosphere. Air quality models need emissions data, with spatial and temporal distribution, to represent air pollutant concentrations. This package, eixport, creates inputs for the air quality models 'WRF-Chem' Grell et al (2005) <doi:10.1016/j.atmosenv.2005.04.027>, 'BRAMS-SPM' Freitas et al (2005) <doi:10.1016/j.atmosenv.2005.07.017> and 'RLINE' Snyder et al (2013) <doi:10.1016/j.atmosenv.2013.05.074>. See the eixport website (<https://atmoschem.github.io/eixport/>) for more information, documentations and examples. More details in Ibarra-Espinosa et al (2018) <doi.org/10.21105/joss.00607>.
Author: Sergio Ibarra-Espinosa [aut, cre]
(<https://orcid.org/0000-0002-3162-1905>),
Daniel Schuch [aut] (<https://orcid.org/0000-0001-5977-4519>),
Edmilson Freitas [ctb] (<https://orcid.org/0000-0001-8783-2747>)
Maintainer: Sergio Ibarra-Espinosa <sergio.ibarra@usp.br>
Diff between eixport versions 0.3.0 dated 2018-03-01 and 0.3.6 dated 2018-10-06
DESCRIPTION | 29 ++-- MD5 | 83 ++++++++---- NAMESPACE | 6 NEWS.md | 36 +++++ R/Lights.R | 6 R/eixport.R | 2 R/emis_opt.R | 20 +-- R/emisco.R | 8 - R/gCO.R |only R/to_as4wrf.R |only R/to_brams_spm.R | 78 ++++++------ R/to_munich.R |only R/to_rline.R | 46 +++---- R/to_wrf.R | 28 ++-- R/wrf_create.R | 200 +++++++++++++++---------------- R/wrf_get.R | 44 ++++-- R/wrf_grid.R | 9 - R/wrf_plot.R | 72 ++++++----- R/wrf_profile.R | 6 R/wrf_put.R | 4 data/emis_opt.rda |binary data/emisco.rda |binary data/gCO.rda |only inst/CITATION |only inst/extdata/gwrf1.rds |only inst/extdata/wrfchemi_d02_2011-08-02.zip |only man/Lights.Rd | 6 man/eixport.Rd | 2 man/emis_opt.Rd | 19 -- man/emisco.Rd | 8 - man/gCO.Rd |only man/to_as4wrf.Rd |only man/to_brams_spm.Rd | 19 +- man/to_munich.Rd |only man/to_rline.Rd | 10 - man/to_wrf.Rd | 18 +- man/wrf_create.Rd | 73 ++++++----- man/wrf_get.Rd | 13 +- man/wrf_grid.Rd | 2 man/wrf_plot.Rd | 14 +- man/wrf_profile.Rd | 6 tests/testthat/Rplots.pdf |only tests/testthat/test-to_as4wrf.R |only tests/testthat/test-to_brams_spm.R |only tests/testthat/test-to_munich.R |only tests/testthat/test-to_rline.R | 30 ++++ tests/testthat/test-to_wrf.R |only tests/testthat/test-wrf_create.R |only tests/testthat/test-wrf_get.R |only tests/testthat/test-wrf_grid.R |only tests/testthat/test-wrf_plot.R |only tests/testthat/test-wrf_profile.R |only tests/testthat/test-wrf_put.R |only 53 files changed, 517 insertions(+), 380 deletions(-)
Title: An Analysis Toolbox for Hermitian Positive Definite Matrices
Description: An implementation of data analysis tools for samples of symmetric or
Hermitian positive definite matrices, such as collections of covariance matrices
or spectral density matrices. The tools in this package can be used to perform: (i)
intrinsic wavelet transforms for curves (1D) or surfaces (2D) of Hermitian positive
definite matrices with applications to dimension reduction, denoising and clustering in the
space of Hermitian positive definite matrices; and (ii) exploratory data analysis and inference
for samples of positive definite matrices by means of intrinsic data depth functions and
rank-based hypothesis tests in the space of Hermitian positive definite matrices.
Author: Joris Chau [aut, cre]
Maintainer: Joris Chau <joris.chau@openanalytics.eu>
Diff between pdSpecEst versions 1.2.2 dated 2018-07-10 and 1.2.3 dated 2018-10-06
DESCRIPTION | 13 MD5 | 30 - NEWS.md | 7 README.md | 78 +++- build/partial.rdb |binary build/vignette.rds |binary inst/REFERENCES.bib | 19 - inst/doc/depth_ranktests.html | 710 +++++++++++++++++++++++++--------------- inst/doc/wavelet_est_clust.html | 426 +++++++++++++++++------- man/InvWavTransf2D.Rd | 3 man/WavTransf1D.Rd | 3 man/pdMean.Rd | 3 man/pdPgram.Rd | 3 man/pdSpecClust1D.Rd | 4 man/pdSpecClust2D.Rd | 4 src/Makevars.win | 2 16 files changed, 887 insertions(+), 418 deletions(-)
Title: 'Rcpp' Bindings for the 'CCTZ' Library
Description: 'Rcpp' Access to the 'CCTZ' timezone library is provided. 'CCTZ' is
a C++ library for translating between absolute and civil times using the rules
of a time zone. The 'CCTZ' source code, released under the Apache 2.0 License,
is included in this package. See <https://github.com/google/cctz> for more
details.
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppCCTZ versions 0.2.3 dated 2017-06-20 and 0.2.4 dated 2018-10-06
RcppCCTZ-0.2.3/RcppCCTZ/inst/include/civil_time.h |only RcppCCTZ-0.2.3/RcppCCTZ/inst/include/civil_time_detail.h |only RcppCCTZ-0.2.3/RcppCCTZ/inst/include/get_time.h |only RcppCCTZ-0.2.3/RcppCCTZ/inst/include/time_zone.h |only RcppCCTZ-0.2.3/RcppCCTZ/inst/include/time_zone_fixed.h |only RcppCCTZ-0.2.3/RcppCCTZ/inst/include/time_zone_if.h |only RcppCCTZ-0.2.3/RcppCCTZ/inst/include/time_zone_impl.h |only RcppCCTZ-0.2.3/RcppCCTZ/inst/include/time_zone_info.h |only RcppCCTZ-0.2.3/RcppCCTZ/inst/include/time_zone_libc.h |only RcppCCTZ-0.2.3/RcppCCTZ/inst/include/time_zone_posix.h |only RcppCCTZ-0.2.3/RcppCCTZ/inst/include/tzfile.h |only RcppCCTZ-0.2.3/RcppCCTZ/inst/include/zone_info_source.h |only RcppCCTZ-0.2.3/RcppCCTZ/tests/simpleTests.R |only RcppCCTZ-0.2.3/RcppCCTZ/tests/simpleTests.Rout.save |only RcppCCTZ-0.2.4/RcppCCTZ/ChangeLog | 57 ++ RcppCCTZ-0.2.4/RcppCCTZ/DESCRIPTION | 11 RcppCCTZ-0.2.4/RcppCCTZ/MD5 | 73 +- RcppCCTZ-0.2.4/RcppCCTZ/R/RcppExports.R | 40 - RcppCCTZ-0.2.4/RcppCCTZ/cleanup | 2 RcppCCTZ-0.2.4/RcppCCTZ/inst/NEWS.Rd | 16 RcppCCTZ-0.2.4/RcppCCTZ/inst/include/cctz |only RcppCCTZ-0.2.4/RcppCCTZ/inst/unitTests |only RcppCCTZ-0.2.4/RcppCCTZ/man/formatDatetime.Rd | 2 RcppCCTZ-0.2.4/RcppCCTZ/man/parseDatetime.Rd | 6 RcppCCTZ-0.2.4/RcppCCTZ/man/toTz.Rd | 2 RcppCCTZ-0.2.4/RcppCCTZ/man/tzDiff.Rd | 2 RcppCCTZ-0.2.4/RcppCCTZ/src/RcppExports.cpp | 60 +- RcppCCTZ-0.2.4/RcppCCTZ/src/civil_time_detail.cc | 16 RcppCCTZ-0.2.4/RcppCCTZ/src/examples.cpp | 4 RcppCCTZ-0.2.4/RcppCCTZ/src/get_time.h |only RcppCCTZ-0.2.4/RcppCCTZ/src/time_tool.cc | 292 +++++++++-- RcppCCTZ-0.2.4/RcppCCTZ/src/time_zone_fixed.cc | 48 - RcppCCTZ-0.2.4/RcppCCTZ/src/time_zone_fixed.h |only RcppCCTZ-0.2.4/RcppCCTZ/src/time_zone_format.cc | 117 ++-- RcppCCTZ-0.2.4/RcppCCTZ/src/time_zone_if.cc | 3 RcppCCTZ-0.2.4/RcppCCTZ/src/time_zone_if.h |only RcppCCTZ-0.2.4/RcppCCTZ/src/time_zone_impl.cc | 16 RcppCCTZ-0.2.4/RcppCCTZ/src/time_zone_impl.h |only RcppCCTZ-0.2.4/RcppCCTZ/src/time_zone_info.cc | 370 ++++++++++----- RcppCCTZ-0.2.4/RcppCCTZ/src/time_zone_info.h |only RcppCCTZ-0.2.4/RcppCCTZ/src/time_zone_libc.cc | 29 - RcppCCTZ-0.2.4/RcppCCTZ/src/time_zone_libc.h |only RcppCCTZ-0.2.4/RcppCCTZ/src/time_zone_lookup.cc | 83 +++ RcppCCTZ-0.2.4/RcppCCTZ/src/time_zone_posix.h |only RcppCCTZ-0.2.4/RcppCCTZ/src/tzfile.h |only RcppCCTZ-0.2.4/RcppCCTZ/src/utilities.cpp | 57 +- RcppCCTZ-0.2.4/RcppCCTZ/src/zone_info_source.cc |only RcppCCTZ-0.2.4/RcppCCTZ/tests/doRUnit.R |only 48 files changed, 927 insertions(+), 379 deletions(-)
Title: Optimal Equal-HR Method to Find Two Cutpoints for U-Shaped
Relationships in Cox Model
Description: Use optimal equal-HR method to determine two optimal cutpoints of a continuous predictor that has a U-shaped relationship with survival outcomes based on Cox regression model. The optimal equal-HR method estimates two optimal cut-points that have approximately the same log hazard value based on Cox regression model and divides individuals into different groups according to their HR values.
Author: Yimin Chen, Zhang Jinxin
Maintainer: Yimin Chen <chenyimin0226@126.com>
Diff between CutpointsOEHR versions 0.1.0 dated 2018-09-20 and 0.1.1 dated 2018-10-06
DESCRIPTION | 6 +++--- MD5 | 5 +++-- R/findcutpoints.R | 4 ++-- README.md |only 4 files changed, 8 insertions(+), 7 deletions(-)
Title: Distributions for Generalized Additive Models for Location Scale
and Shape
Description: A set of distributions which can be used for modelling the response variables in Generalized Additive Models for Location Scale and Shape, Rigby and Stasinopoulos (2005), <doi:10.1111/j.1467-9876.2005.00510.x>. The distributions can be continuous, discrete or mixed distributions. Extra distributions can be created, by transforming, any continuous distribution defined on the real line, to a distribution defined on ranges 0 to infinity or 0 to 1, by using a ''log'' or a ''logit' transformation respectively.
Author: Mikis Stasinopoulos [aut, cre, cph],
Robert Rigby [aut],
Calliope Akantziliotou [ctb],
Vlasios Voudouris [ctb],
Gillian Heller [ctb],
Fernanda De Bastiani [ctb],
Raydonal Ospina [ctb],
Nicoletta Motpan [ctb],
Fiona McElduff [ctb],
Majid Djennad [ctb],
Marco Enea [ctb],
Alexios Ghalanos [ctb],
Christos Argyropoulos [ctb],
Almond Stocker [ctb],
Jens Lichter [ctb],
Stanislaus Stadlmann [ctb]
Maintainer: Mikis Stasinopoulos <d.stasinopoulos@londonmet.ac.uk>
Diff between gamlss.dist versions 5.0-6 dated 2018-06-06 and 5.1-0 dated 2018-10-06
gamlss.dist-5.0-6/gamlss.dist/R/make-link-gamlss-4-4-13.R |only gamlss.dist-5.1-0/gamlss.dist/DESCRIPTION | 21 gamlss.dist-5.1-0/gamlss.dist/MD5 | 94 +- gamlss.dist-5.1-0/gamlss.dist/NAMESPACE | 1 gamlss.dist-5.1-0/gamlss.dist/R/BE.R | 4 gamlss.dist-5.1-0/gamlss.dist/R/BEo.R | 4 gamlss.dist-5.1-0/gamlss.dist/R/BNB.R | 15 gamlss.dist-5.1-0/gamlss.dist/R/EGB2.R | 4 gamlss.dist-5.1-0/gamlss.dist/R/EXP.R | 116 +- gamlss.dist-5.1-0/gamlss.dist/R/GA.R | 150 +-- gamlss.dist-5.1-0/gamlss.dist/R/GEOM.R | 5 gamlss.dist-5.1-0/gamlss.dist/R/GEOMo.R | 5 gamlss.dist-5.1-0/gamlss.dist/R/GG.R | 8 gamlss.dist-5.1-0/gamlss.dist/R/GT.R | 4 gamlss.dist-5.1-0/gamlss.dist/R/GU.R | 142 +-- gamlss.dist-5.1-0/gamlss.dist/R/IG.R | 230 ++-- gamlss.dist-5.1-0/gamlss.dist/R/IGA.R | 16 gamlss.dist-5.1-0/gamlss.dist/R/JSU.R | 645 +++++++------- gamlss.dist-5.1-0/gamlss.dist/R/JSUo.R | 404 ++++---- gamlss.dist-5.1-0/gamlss.dist/R/LG.R | 5 gamlss.dist-5.1-0/gamlss.dist/R/Logistic.R | 128 +- gamlss.dist-5.1-0/gamlss.dist/R/NO.r | 8 gamlss.dist-5.1-0/gamlss.dist/R/NOF-13-3-13.R | 4 gamlss.dist-5.1-0/gamlss.dist/R/PARETO2.R | 19 gamlss.dist-5.1-0/gamlss.dist/R/PARETO2o.R | 20 gamlss.dist-5.1-0/gamlss.dist/R/PE.R | 4 gamlss.dist-5.1-0/gamlss.dist/R/PE2.R | 4 gamlss.dist-5.1-0/gamlss.dist/R/RG.R | 136 +- gamlss.dist-5.1-0/gamlss.dist/R/SN1.R | 509 +++++------ gamlss.dist-5.1-0/gamlss.dist/R/SN2.R | 436 ++++----- gamlss.dist-5.1-0/gamlss.dist/R/SST.R | 5 gamlss.dist-5.1-0/gamlss.dist/R/TF.R | 252 ++--- gamlss.dist-5.1-0/gamlss.dist/R/TF2.R | 4 gamlss.dist-5.1-0/gamlss.dist/R/WEI.R | 150 +-- gamlss.dist-5.1-0/gamlss.dist/R/WEI2.R | 158 +-- gamlss.dist-5.1-0/gamlss.dist/R/WEI3.R | 160 +-- gamlss.dist-5.1-0/gamlss.dist/R/YULE.R | 5 gamlss.dist-5.1-0/gamlss.dist/R/ZAGA.R | 4 gamlss.dist-5.1-0/gamlss.dist/R/ZAIG.R | 14 gamlss.dist-5.1-0/gamlss.dist/R/ZIBNB.R | 1 gamlss.dist-5.1-0/gamlss.dist/R/discBURR12.R |only gamlss.dist-5.1-0/gamlss.dist/R/exGAUS.R | 416 ++++----- gamlss.dist-5.1-0/gamlss.dist/R/logNO.R | 152 +-- gamlss.dist-5.1-0/gamlss.dist/R/make-link-gamlss.R |only gamlss.dist-5.1-0/gamlss.dist/R/po.r | 122 +- gamlss.dist-5.1-0/gamlss.dist/build/partial.rdb |binary gamlss.dist-5.1-0/gamlss.dist/man/DBURR12.Rd |only gamlss.dist-5.1-0/gamlss.dist/man/JSU.Rd | 8 gamlss.dist-5.1-0/gamlss.dist/man/SICHEL.Rd | 2 gamlss.dist-5.1-0/gamlss.dist/man/gamlss.family.Rd | 1 50 files changed, 2369 insertions(+), 2226 deletions(-)
Title: GAMLSS Data
Description: Data used as examples to demonstrate GAMLSS models.
Author: Mikis Stasinopoulos <d.stasinopoulos@londonmet.ac.uk>, Bob
Rigby, Fernanda De Bastiani
Maintainer: Mikis Stasinopoulos <d.stasinopoulos@londonmet.ac.uk>
Diff between gamlss.data versions 5.0-1 dated 2018-04-30 and 5.1-0 dated 2018-10-06
DESCRIPTION | 8 ++-- MD5 | 88 ++++++++++++++++++++++++------------------------ data/CD4.rda |binary data/LGAclaims.rda |binary data/Leukemia.RData |binary data/Mums.rda |binary data/VictimsOfCrime.rda |binary data/acidity.rda |binary data/aep.rda |binary data/aids.rda |binary data/aircond.rda |only data/alveolar.rda |binary data/computer.rda |binary data/datalist | 1 data/db.rda |binary data/dbbmi.rda |binary data/dbhh.RData |binary data/eu15.RData |binary data/fabric.rda |binary data/film30.rda |binary data/film90.RData |binary data/glass.rda |binary data/glasses.RData |binary data/grip.RData |binary data/hodges.rda |binary data/hodges1.rda |binary data/lice.rda |binary data/margolin.rda |binary data/meta.rda |binary data/mvi.rda |binary data/mviBig.rda |binary data/oil.RData |binary data/parzen.rda |binary data/polio.rda |binary data/rent.rda |binary data/rent99.polys.rda |binary data/rent99.rda |binary data/respInf.rda |binary data/species.rda |binary data/stylo.rda |binary data/tensile.rda |binary data/trd.RData |binary data/tse.rda |binary data/usair.rda |binary data/vas5.rda |binary man/aircond.Rd |only 46 files changed, 50 insertions(+), 47 deletions(-)
Title: Statistical Toolbox for Sedimentary Provenance Analysis
Description: Bundles a number of established statistical methods to facilitate the visual interpretation of large datasets in sedimentary geology. Includes functionality for adaptive kernel density estimation, principal component analysis, correspondence analysis, multidimensional scaling, generalised procrustes analysis and individual differences scaling using a variety of dissimilarity measures. Univariate provenance proxies, such as single-grain ages or (isotopic) compositions are compared with the Kolmogorov-Smirnov, Kuiper or Sircombe-Hazelton L2 distances. Categorical provenance proxies such as chemical compositions are compared with the Aitchison and Bray-Curtis distances, and point-counting data with the chi-square distance. Also included are tools to plot compositional and point-counting data on ternary diagrams, to calculate the sample size required for specified levels of statistical precision, and to assess the effects of hydraulic sorting on detrital compositions. Includes an intuitive query-based user interface for users who are not proficient in R.
Author: Pieter Vermeesch [aut, cre]
Maintainer: Pieter Vermeesch <p.vermeesch@ucl.ac.uk>
Diff between provenance versions 2.1 dated 2018-08-03 and 2.2 dated 2018-10-06
DESCRIPTION | 8 ++++---- MD5 | 23 ++++++++++++----------- R/gui.R | 10 +++++----- R/io.R | 26 +++++++++++++++++--------- R/radialplot.R | 8 +++++--- R/ternary.R | 6 +++--- R/toolbox.R | 8 ++++---- README.md |only man/diss.Rd | 8 ++++---- man/read.compositional.Rd | 5 ++++- man/read.counts.Rd | 5 ++++- man/read.densities.Rd | 5 ++++- man/read.distributional.Rd | 5 ++++- 13 files changed, 70 insertions(+), 47 deletions(-)
Title: Generalised Additive Models for Location Scale and Shape
Description: Functions for fitting the Generalized Additive Models for Location Scale and Shape introduced by Rigby and Stasinopoulos (2005), <doi:10.1111/j.1467-9876.2005.00510.x>. The models use a distributional regression approach where all the parameters of the conditional distribution of the response variable are modelled using explanatory variables.
Author: Mikis Stasinopoulos [aut, cre, cph],
Bob Rigby [aut],
Vlasios Voudouris [ctb],
Calliope Akantziliotou [ctb],
Marco Enea [ctb],
Daniil Kiose [ctb]
Maintainer: Mikis Stasinopoulos <d.stasinopoulos@londonmet.ac.uk>
Diff between gamlss versions 5.1-0 dated 2018-06-08 and 5.1-2 dated 2018-10-06
DESCRIPTION | 8 - MD5 | 24 ++--- NAMESPACE | 4 R/extra.R | 26 +++++ R/getQuantile.R |only R/pb.R | 237 +++++++++++++++++++++++++++++++++-------------------- R/pb_goingtozero.R | 2 R/pbc.R | 235 +++++++++++++++++++++++++++++++--------------------- build/partial.rdb |binary inst/doc/NEWS.txt | 28 ++++++ man/IC.Rd | 20 ++-- man/getPEF.Rd | 2 man/getQuantile.Rd |only man/ps.Rd | 11 +- 14 files changed, 388 insertions(+), 209 deletions(-)
Title: Draw Treemaps in 'ggplot2'
Description: Provides 'ggplot2' geoms for drawing treemaps.
Author: David Wilkins <david@wilkox.org>
Maintainer: David Wilkins <david@wilkox.org>
Diff between treemapify versions 2.5.0 dated 2018-04-30 and 2.5.1 dated 2018-10-06
DESCRIPTION | 11 MD5 | 62 +- NAMESPACE | 2 NEWS.md | 18 R/geom_treemap.R | 59 + R/geom_treemap_subgroup_border.R | 41 - R/geom_treemap_subgroup_text.R | 51 + R/geom_treemap_text.R | 30 R/treemap_fixed.R | 11 R/treemap_squarified.R | 85 +- R/treemapify.R | 155 +++-- README.md | 25 build/vignette.rds |binary inst/doc/introduction-to-treemapify.R | 13 inst/doc/introduction-to-treemapify.Rmd | 18 inst/doc/introduction-to-treemapify.html | 576 ++++++++++--------- man/figures/README-basic_treemap-1.png |binary man/figures/README-complex_treemap-1.png |binary man/figures/README-geom_treemap_text-1.png |binary man/figures/README-multiple_subgrouped_treemap-1.png |binary man/figures/README-subgrouped_treemap-1.png |binary man/figures/animated_treemap.gif |binary man/geom_treemap.Rd | 50 + man/geom_treemap_subgroup_border.Rd | 22 man/geom_treemap_subgroup_text.Rd | 31 - man/geom_treemap_text.Rd | 19 man/treemapify.Rd | 61 +- tests/testthat/test_G20.R | 17 tests/testthat/test_geoms.R | 132 +--- tests/testthat/test_layout_functions.R |only tests/testthat/test_plots.R |only tests/testthat/test_treemapify.R | 89 ++ vignettes/introduction-to-treemapify.Rmd | 18 33 files changed, 975 insertions(+), 621 deletions(-)
Title: 'ODBC' Connection Class for Package stacomiR
Description: S4 class wrappers for the 'ODBC' connection, also provides some
utilities to paste small datasets to clipboard, rename columns. It is used by the package 'stacomiR' for
connections to the database. Development versions of 'stacomiR' are available in R-forge.
Author: Cedric Briand [aut, cre]
Maintainer: Cedric Briand <cedric.briand00@gmail.com>
Diff between stacomirtools versions 0.5.2 dated 2017-06-24 and 0.5.3 dated 2018-10-06
.Rinstignore |only DESCRIPTION | 14 +-- MD5 | 14 ++- R/ConnectionODBC.r | 8 - R/RequeteODBC.r | 189 ++++++++++++++++++------------------------- R/stacomirtools-package.R |only R/utilities.r | 47 ++++++++++ inst |only man/stacomirtools-package.Rd | 2 tests |only 10 files changed, 149 insertions(+), 125 deletions(-)
Title: An Interface to Google Drive
Description: Manage Google Drive files from R.
Author: Lucy D'Agostino McGowan [aut],
Jennifer Bryan [aut, cre] (<https://orcid.org/0000-0002-6983-2759>),
RStudio [cph, fnd]
Maintainer: Jennifer Bryan <jenny@rstudio.com>
Diff between googledrive versions 0.1.1 dated 2017-08-28 and 0.1.2 dated 2018-10-06
googledrive-0.1.1/googledrive/R/googledrive-package.r |only googledrive-0.1.1/googledrive/man/googledrive.Rd |only googledrive-0.1.2/googledrive/DESCRIPTION | 30 - googledrive-0.1.2/googledrive/MD5 | 164 ++++---- googledrive-0.1.2/googledrive/NAMESPACE | 3 googledrive-0.1.2/googledrive/NEWS.md | 7 googledrive-0.1.2/googledrive/R/aaa.R | 9 googledrive-0.1.2/googledrive/R/as_dribble.R | 4 googledrive-0.1.2/googledrive/R/as_id.R | 2 googledrive-0.1.2/googledrive/R/as_teamdrive.R | 2 googledrive-0.1.2/googledrive/R/dribble.R | 33 + googledrive-0.1.2/googledrive/R/drive_auth.R | 44 +- googledrive-0.1.2/googledrive/R/drive_browse.R | 2 googledrive-0.1.2/googledrive/R/drive_cp.R | 2 googledrive-0.1.2/googledrive/R/drive_fields.R | 6 googledrive-0.1.2/googledrive/R/drive_find.R | 10 googledrive-0.1.2/googledrive/R/drive_get.R | 4 googledrive-0.1.2/googledrive/R/drive_mime_type.R | 6 googledrive-0.1.2/googledrive/R/drive_mv.R | 28 - googledrive-0.1.2/googledrive/R/drive_publish.R | 1 googledrive-0.1.2/googledrive/R/drive_reveal.R | 7 googledrive-0.1.2/googledrive/R/drive_reveal_path.R | 13 googledrive-0.1.2/googledrive/R/drive_rm.R | 2 googledrive-0.1.2/googledrive/R/drive_share.R | 6 googledrive-0.1.2/googledrive/R/drive_trash.R | 3 googledrive-0.1.2/googledrive/R/drive_upload.R | 15 googledrive-0.1.2/googledrive/R/generate_request.R | 5 googledrive-0.1.2/googledrive/R/googledrive-package.R |only googledrive-0.1.2/googledrive/R/make_request.R | 26 - googledrive-0.1.2/googledrive/R/process_response.R | 19 - googledrive-0.1.2/googledrive/R/sysdata.rda |binary googledrive-0.1.2/googledrive/R/team_drive_create.R | 2 googledrive-0.1.2/googledrive/R/tree-climbing.R | 6 googledrive-0.1.2/googledrive/R/utils.R | 20 - googledrive-0.1.2/googledrive/build/vignette.rds |binary googledrive-0.1.2/googledrive/inst/doc/googledrive.Rmd | 4 googledrive-0.1.2/googledrive/inst/doc/googledrive.html | 188 +++++++++- googledrive-0.1.2/googledrive/man/as_team_drive.Rd | 7 googledrive-0.1.2/googledrive/man/drive_auth.Rd | 1 googledrive-0.1.2/googledrive/man/drive_auth_config.Rd | 1 googledrive-0.1.2/googledrive/man/drive_browse.Rd | 4 googledrive-0.1.2/googledrive/man/drive_cp.Rd | 20 - googledrive-0.1.2/googledrive/man/drive_deauth.Rd | 1 googledrive-0.1.2/googledrive/man/drive_download.Rd | 7 googledrive-0.1.2/googledrive/man/drive_find.Rd | 26 - googledrive-0.1.2/googledrive/man/drive_get.Rd | 35 - googledrive-0.1.2/googledrive/man/drive_link.Rd | 4 googledrive-0.1.2/googledrive/man/drive_ls.Rd | 3 googledrive-0.1.2/googledrive/man/drive_mkdir.Rd | 3 googledrive-0.1.2/googledrive/man/drive_mv.Rd | 20 - googledrive-0.1.2/googledrive/man/drive_publish.Rd | 5 googledrive-0.1.2/googledrive/man/drive_rename.Rd | 7 googledrive-0.1.2/googledrive/man/drive_reveal.Rd | 23 - googledrive-0.1.2/googledrive/man/drive_share.Rd | 5 googledrive-0.1.2/googledrive/man/drive_token.Rd | 1 googledrive-0.1.2/googledrive/man/drive_trash.Rd | 5 googledrive-0.1.2/googledrive/man/drive_update.Rd | 7 googledrive-0.1.2/googledrive/man/drive_upload.Rd | 23 - googledrive-0.1.2/googledrive/man/generate_request.Rd | 1 googledrive-0.1.2/googledrive/man/googledrive-package.Rd |only googledrive-0.1.2/googledrive/man/make_request.Rd | 1 googledrive-0.1.2/googledrive/man/process_response.Rd | 1 googledrive-0.1.2/googledrive/man/team_drive_create.Rd | 12 googledrive-0.1.2/googledrive/man/team_drive_find.Rd | 10 googledrive-0.1.2/googledrive/man/team_drive_get.Rd | 10 googledrive-0.1.2/googledrive/man/team_drive_rm.Rd | 12 googledrive-0.1.2/googledrive/man/team_drive_update.Rd | 16 googledrive-0.1.2/googledrive/man/team_drives.Rd | 7 googledrive-0.1.2/googledrive/tests/testthat/clean.html |only googledrive-0.1.2/googledrive/tests/testthat/driver.R | 20 - googledrive-0.1.2/googledrive/tests/testthat/helper.R | 47 +- googledrive-0.1.2/googledrive/tests/testthat/test-as_id.R | 6 googledrive-0.1.2/googledrive/tests/testthat/test-dribble-class.R | 4 googledrive-0.1.2/googledrive/tests/testthat/test-drive_cp.R | 6 googledrive-0.1.2/googledrive/tests/testthat/test-drive_fields.R | 1 googledrive-0.1.2/googledrive/tests/testthat/test-drive_get.R | 3 googledrive-0.1.2/googledrive/tests/testthat/test-drive_ls.R | 6 googledrive-0.1.2/googledrive/tests/testthat/test-drive_mime_type.R | 34 - googledrive-0.1.2/googledrive/tests/testthat/test-drive_publish.R | 22 - googledrive-0.1.2/googledrive/tests/testthat/test-drive_share.R | 5 googledrive-0.1.2/googledrive/tests/testthat/test-drive_update.R | 6 googledrive-0.1.2/googledrive/tests/testthat/test-drive_upload.R | 18 googledrive-0.1.2/googledrive/tests/testthat/test-generate_request.R | 6 googledrive-0.1.2/googledrive/tests/testthat/testing-token.rds |only googledrive-0.1.2/googledrive/vignettes/articles/multiple-files.Rmd |only googledrive-0.1.2/googledrive/vignettes/articles/permissions.Rmd |only googledrive-0.1.2/googledrive/vignettes/googledrive.Rmd | 4 87 files changed, 681 insertions(+), 458 deletions(-)
Title: Compute Expected Shortfall and Value at Risk for Continuous
Distributions
Description: Compute expected shortfall (ES) and Value at Risk (VaR) from a
quantile function, distribution function, random number generator or
probability density function. ES is also known as Conditional Value at
Risk (CVaR). Virtually any continuous distribution can be specified.
The functions are vectorized over the arguments. The computations are
done directly from the definitions, see e.g. Acerbi and Tasche (2002)
<doi:10.1111/1468-0300.00091>. Some support for GARCH models is provided,
as well.
Author: Georgi N. Boshnakov [aut, cre]
Maintainer: Georgi N. Boshnakov <georgi.boshnakov@manchester.ac.uk>
Diff between cvar versions 0.2-0 dated 2018-08-19 and 0.3-0 dated 2018-10-06
DESCRIPTION | 17 +++++---- MD5 | 39 ++++++++++++--------- NAMESPACE | 14 +++++++ NEWS.md | 15 ++++++++ R/VaR.R | 77 +++++++++++++++++++++++++++++-------------- R/cvar-package.R | 35 ++++++++++++++----- R/garch.R |only README.md | 8 +--- build/partial.rdb |binary build/vignette.rds |binary inst/doc/Guide_cvar.Rnw | 2 - inst/doc/Guide_cvar.pdf |binary man/ES.Rd | 38 ++++++++++----------- man/GarchModel.Rd |only man/VaR.Rd | 15 +++++++- man/cvar-package.Rd | 32 ++++++++++++----- man/predict.garch1c1.Rd |only man/sim_garch1c1.Rd |only tests/testthat/a.RDS |only tests/testthat/a_pred.RDS |only tests/testthat/test-VaR.R | 38 ++++++++++++--------- tests/testthat/test-garch.R |only vignettes/Guide_cvar.Rnw | 2 - vignettes/auto/Guide_cvar.el | 10 ++--- 24 files changed, 227 insertions(+), 115 deletions(-)
More information about radiant.design at CRAN
Permanent link
More information about radiant.basics at CRAN
Permanent link
Title: Moran's Eigenvector-Based Spatial Regression Models
Description: Functions for estimating Moran's eigenvector-based
spatial regression models.
For details see Murakami (2018) <arXiv:1703.04467>.
Author: Daisuke Murakami
Maintainer: Daisuke Murakami <dmuraka@ism.ac.jp>
Diff between spmoran versions 0.1.5 dated 2018-08-09 and 0.1.6 dated 2018-10-06
DESCRIPTION | 17 +++--- MD5 | 34 +++++++------ NAMESPACE | 9 ++- R/lsem.R |only R/lslm.R |only R/meigen.R | 6 +- R/weigen.R |only inst/doc/vignettes.pdf |binary man/esf.Rd | 24 ++++----- man/lsem.Rd |only man/lslm.Rd |only man/meigen.Rd | 16 +++--- man/meigen0.Rd | 8 +-- man/meigen_f.Rd | 12 ++-- man/plot_qr.Rd | 48 +++++++++--------- man/predict0.Rd | 96 ++++++++++++++++++------------------ man/predict0_vc.Rd | 16 +++--- man/resf.Rd | 104 +++++++++++++++++++-------------------- man/resf_qr.Rd | 128 ++++++++++++++++++++++++------------------------- man/resf_vc.Rd | 34 ++++++------- man/weigen.Rd |only 21 files changed, 282 insertions(+), 270 deletions(-)
Title: GUI for DErivatives in R
Description: A nice GUI for financial DErivatives in R.
Author: S Subramanian <ssubramanian@sssihl.edu.in>
Maintainer: S Subramanian <ssubramanian@sssihl.edu.in>
Diff between GUIDE versions 1.2.3.1 dated 2016-09-13 and 1.2.7 dated 2018-10-06
GUIDE-1.2.3.1/GUIDE/inst/extdata/Thumbs.db |only GUIDE-1.2.3.1/GUIDE/vignettes/A_guide_to_GUIDE-concordance.tex |only GUIDE-1.2.3.1/GUIDE/vignettes/A_guide_to_GUIDE.tex |only GUIDE-1.2.3.1/GUIDE/vignettes/Thumbs.db |only GUIDE-1.2.7/GUIDE/DESCRIPTION | 10 - GUIDE-1.2.7/GUIDE/MD5 | 84 ++++------ GUIDE-1.2.7/GUIDE/R/blackscholes.R | 14 - GUIDE-1.2.7/GUIDE/R/bondforwardtreegui.R | 12 - GUIDE-1.2.7/GUIDE/R/bondfuturestreegui.R | 12 - GUIDE-1.2.7/GUIDE/R/bondoptiontreegui.R | 20 +- GUIDE-1.2.7/GUIDE/R/bondtreegui.R | 12 - GUIDE-1.2.7/GUIDE/R/calcgreeks.R | 12 - GUIDE-1.2.7/GUIDE/R/captreegui.R | 14 - GUIDE-1.2.7/GUIDE/R/cashprice.R | 6 GUIDE-1.2.7/GUIDE/R/cdswap.R | 8 GUIDE-1.2.7/GUIDE/R/curswapvalue.R | 18 +- GUIDE-1.2.7/GUIDE/R/eurodollar.R | 2 GUIDE-1.2.7/GUIDE/R/floortreegui.R | 14 - GUIDE-1.2.7/GUIDE/R/forwardcommodity.R | 12 - GUIDE-1.2.7/GUIDE/R/forwardcurrency.R | 10 - GUIDE-1.2.7/GUIDE/R/forwardstock.R | 10 - GUIDE-1.2.7/GUIDE/R/fra.R | 8 GUIDE-1.2.7/GUIDE/R/fravalue.R | 10 - GUIDE-1.2.7/GUIDE/R/futurescommodity.R | 12 - GUIDE-1.2.7/GUIDE/R/futurescurrency.R | 10 - GUIDE-1.2.7/GUIDE/R/futuresstock.R | 10 - GUIDE-1.2.7/GUIDE/R/greekneutrality.R | 12 - GUIDE-1.2.7/GUIDE/R/impvol.R | 14 - GUIDE-1.2.7/GUIDE/R/irswapvalue.R | 10 - GUIDE-1.2.7/GUIDE/R/pval.R | 2 GUIDE-1.2.7/GUIDE/R/rate.R | 2 GUIDE-1.2.7/GUIDE/R/ratetreegui.R | 8 GUIDE-1.2.7/GUIDE/R/stockoptiontreegui.R | 18 +- GUIDE-1.2.7/GUIDE/R/swaptiontreegui.R | 14 - GUIDE-1.2.7/GUIDE/R/swaptreegui.R | 12 - GUIDE-1.2.7/GUIDE/R/trading.menu.R | 80 ++++----- GUIDE-1.2.7/GUIDE/R/var1stock.R | 8 GUIDE-1.2.7/GUIDE/R/var2stocks.R | 16 - GUIDE-1.2.7/GUIDE/R/zval.R | 2 GUIDE-1.2.7/GUIDE/build/vignette.rds |binary GUIDE-1.2.7/GUIDE/inst/doc/A_guide_to_GUIDE.R | 1 GUIDE-1.2.7/GUIDE/inst/doc/A_guide_to_GUIDE.Rnw | 24 +- GUIDE-1.2.7/GUIDE/inst/doc/A_guide_to_GUIDE.pdf |binary GUIDE-1.2.7/GUIDE/man/trading.menu.Rd | 4 GUIDE-1.2.7/GUIDE/vignettes/A_guide_to_GUIDE.Rnw | 24 +- 45 files changed, 284 insertions(+), 287 deletions(-)