Fri, 16 Nov 2018

Package googleAuthR updated to version 0.7.0 with previous version 0.6.3 dated 2018-06-21

Title: Authenticate and Create Google APIs
Description: Create R functions that interact with OAuth2 Google APIs <https://developers.google.com/apis-explorer/> easily, with auto-refresh and Shiny compatibility.
Author: Mark Edmondson [aut, cre] (<https://orcid.org/0000-0002-8434-3881>), Jennifer Bryan [ctb], Johann deBoer [ctb], Neal Richardson [ctb], David Kulp [ctb], Joe Cheng [ctb]
Maintainer: Mark Edmondson <m@sunholo.com>

Diff between googleAuthR versions 0.6.3 dated 2018-06-21 and 0.7.0 dated 2018-11-16

 googleAuthR-0.6.3/googleAuthR/inst/drive                                                                       |only
 googleAuthR-0.6.3/googleAuthR/inst/embed                                                                       |only
 googleAuthR-0.6.3/googleAuthR/inst/flexdashbord                                                                |only
 googleAuthR-0.6.3/googleAuthR/inst/shiny                                                                       |only
 googleAuthR-0.6.3/googleAuthR/man/authReturnCode.Rd                                                            |only
 googleAuthR-0.6.3/googleAuthR/man/createCode.Rd                                                                |only
 googleAuthR-0.6.3/googleAuthR/man/gar_auth_js.Rd                                                               |only
 googleAuthR-0.6.3/googleAuthR/man/gar_auth_jsUI.Rd                                                             |only
 googleAuthR-0.6.3/googleAuthR/man/gar_shiny_getAuthUrl.Rd                                                      |only
 googleAuthR-0.6.3/googleAuthR/man/gar_shiny_getToken.Rd                                                        |only
 googleAuthR-0.6.3/googleAuthR/man/gar_shiny_getUrl.Rd                                                          |only
 googleAuthR-0.6.3/googleAuthR/man/loginOutput.Rd                                                               |only
 googleAuthR-0.6.3/googleAuthR/man/reactiveAccessToken.Rd                                                       |only
 googleAuthR-0.6.3/googleAuthR/man/renderLogin.Rd                                                               |only
 googleAuthR-0.6.3/googleAuthR/man/revokeEventObserver.Rd                                                       |only
 googleAuthR-0.6.3/googleAuthR/tests/testthat/gdrive.oauth                                                      |only
 googleAuthR-0.7.0/googleAuthR/DESCRIPTION                                                                      |   14 
 googleAuthR-0.7.0/googleAuthR/MD5                                                                              |  120 +
 googleAuthR-0.7.0/googleAuthR/NAMESPACE                                                                        |   16 
 googleAuthR-0.7.0/googleAuthR/NEWS.md                                                                          |    8 
 googleAuthR-0.7.0/googleAuthR/R/auth.R                                                                         |    7 
 googleAuthR-0.7.0/googleAuthR/R/batch.R                                                                        |   23 
 googleAuthR-0.7.0/googleAuthR/R/deprecated.R                                                                   |  415 ------
 googleAuthR-0.7.0/googleAuthR/R/discovery_build.R                                                              |    2 
 googleAuthR-0.7.0/googleAuthR/R/discovery_utilities.R                                                          |   27 
 googleAuthR-0.7.0/googleAuthR/R/gce.R                                                                          |    3 
 googleAuthR-0.7.0/googleAuthR/R/generator.R                                                                    |   69 -
 googleAuthR-0.7.0/googleAuthR/R/options.R                                                                      |   16 
 googleAuthR-0.7.0/googleAuthR/R/page_results.R                                                                 |only
 googleAuthR-0.7.0/googleAuthR/R/shiny-auth.R                                                                   |only
 googleAuthR-0.7.0/googleAuthR/R/shiny-js-auth.R                                                                |only
 googleAuthR-0.7.0/googleAuthR/R/shiny-js-signin.R                                                              |only
 googleAuthR-0.7.0/googleAuthR/R/shiny-modifyurl.R                                                              |only
 googleAuthR-0.7.0/googleAuthR/R/shiny.R                                                                        |  358 -----
 googleAuthR-0.7.0/googleAuthR/R/utility.R                                                                      |   17 
 googleAuthR-0.7.0/googleAuthR/inst/css                                                                         |only
 googleAuthR-0.7.0/googleAuthR/inst/doc/advanced-building.Rmd                                                   |   76 +
 googleAuthR-0.7.0/googleAuthR/inst/doc/advanced-building.html                                                  |   76 +
 googleAuthR-0.7.0/googleAuthR/inst/doc/building.Rmd                                                            |    2 
 googleAuthR-0.7.0/googleAuthR/inst/doc/building.html                                                           |    6 
 googleAuthR-0.7.0/googleAuthR/inst/doc/google-authentication-types.Rmd                                         |  170 ++
 googleAuthR-0.7.0/googleAuthR/inst/doc/google-authentication-types.html                                        |  166 ++
 googleAuthR-0.7.0/googleAuthR/inst/doc/setup.html                                                              |    4 
 googleAuthR-0.7.0/googleAuthR/inst/doc/troubleshooting.html                                                    |    4 
 googleAuthR-0.7.0/googleAuthR/inst/googledrive_shiny_demo                                                      |only
 googleAuthR-0.7.0/googleAuthR/inst/img                                                                         |only
 googleAuthR-0.7.0/googleAuthR/inst/js                                                                          |only
 googleAuthR-0.7.0/googleAuthR/inst/js_auth_demo                                                                |only
 googleAuthR-0.7.0/googleAuthR/inst/server_side_auth_demo                                                       |only
 googleAuthR-0.7.0/googleAuthR/inst/server_side_auth_function                                                   |only
 googleAuthR-0.7.0/googleAuthR/inst/signin_demo                                                                 |only
 googleAuthR-0.7.0/googleAuthR/man/gar_api_page.Rd                                                              |only
 googleAuthR-0.7.0/googleAuthR/man/gar_gce_auth.Rd                                                              |    4 
 googleAuthR-0.7.0/googleAuthR/man/gar_shiny_auth.Rd                                                            |only
 googleAuthR-0.7.0/googleAuthR/man/gar_shiny_auth_url.Rd                                                        |only
 googleAuthR-0.7.0/googleAuthR/man/gar_shiny_login_ui.Rd                                                        |only
 googleAuthR-0.7.0/googleAuthR/man/gar_shiny_ui.Rd                                                              |only
 googleAuthR-0.7.0/googleAuthR/man/googleAuth.Rd                                                                |    4 
 googleAuthR-0.7.0/googleAuthR/man/googleAuthUI.Rd                                                              |    4 
 googleAuthR-0.7.0/googleAuthR/man/googleAuth_js.Rd                                                             |only
 googleAuthR-0.7.0/googleAuthR/man/googleAuth_jsUI.Rd                                                           |only
 googleAuthR-0.7.0/googleAuthR/man/googleSignIn.Rd                                                              |only
 googleAuthR-0.7.0/googleAuthR/man/googleSignInUI.Rd                                                            |only
 googleAuthR-0.7.0/googleAuthR/man/silent_auth.Rd                                                               |only
 googleAuthR-0.7.0/googleAuthR/man/with_shiny.Rd                                                                |   13 
 googleAuthR-0.7.0/googleAuthR/tests/testthat/googleAuthR_tests.httr-oauth                                      |binary
 googleAuthR-0.7.0/googleAuthR/tests/testthat/googledrive.oauth                                                 |only
 googleAuthR-0.7.0/googleAuthR/tests/testthat/mock/50c397f6f2ca31ed                                             |only
 googleAuthR-0.7.0/googleAuthR/tests/testthat/mock/8075926ac5b2e94a                                             |only
 googleAuthR-0.7.0/googleAuthR/tests/testthat/test-integration.R                                                |    3 
 googleAuthR-0.7.0/googleAuthR/tests/testthat/test-paging.R                                                     |only
 googleAuthR-0.7.0/googleAuthR/tests/www.googleapis.com/discovery/v1/apis.json                                  |  630 ++++++----
 googleAuthR-0.7.0/googleAuthR/tests/www.googleapis.com/discovery/v1/apis/acceleratedmobilepageurl/v1/rest.json |  140 +-
 googleAuthR-0.7.0/googleAuthR/tests/www.googleapis.com/urlshortener/v1/url-bd4cc3-POST.json                    |    2 
 googleAuthR-0.7.0/googleAuthR/vignettes/advanced-building.Rmd                                                  |   76 +
 googleAuthR-0.7.0/googleAuthR/vignettes/building.Rmd                                                           |    2 
 googleAuthR-0.7.0/googleAuthR/vignettes/google-authentication-types.Rmd                                        |  170 ++
 77 files changed, 1456 insertions(+), 1191 deletions(-)

More information about googleAuthR at CRAN
Permanent link

Package ems updated to version 1.2.1 with previous version 1.2.0 dated 2018-07-28

Title: Epimed Solutions Collection for Data Editing, Analysis, and Benchmark of Health Units
Description: Collection of functions for data analysis and editing of clinical and epidemiological data. Most of them are related to benchmark with prediction models.
Author: Lunna Borges [aut, cre], Pedro Brasil [aut], Camila Cardoso [aut]
Maintainer: Lunna Borges <lunna.borges@epimedsolutions.com>

Diff between ems versions 1.2.0 dated 2018-07-28 and 1.2.1 dated 2018-11-16

 DESCRIPTION       |   19 ++++++++-----------
 MD5               |    6 +++---
 NEWS              |    6 ++++++
 R/miscellaneous.R |    4 ++--
 4 files changed, 19 insertions(+), 16 deletions(-)

More information about ems at CRAN
Permanent link

Package nproc updated to version 2.1.4 with previous version 2.1.1 dated 2018-02-13

Title: Neyman-Pearson (NP) Classification Algorithms and NP Receiver Operating Characteristic (NP-ROC) Curves
Description: In many binary classification applications, such as disease diagnosis and spam detection, practitioners commonly face the need to limit type I error (i.e., the conditional probability of misclassifying a class 0 observation as class 1) so that it remains below a desired threshold. To address this need, the Neyman-Pearson (NP) classification paradigm is a natural choice; it minimizes type II error (i.e., the conditional probability of misclassifying a class 1 observation as class 0) while enforcing an upper bound, alpha, on the type I error. Although the NP paradigm has a century-long history in hypothesis testing, it has not been well recognized and implemented in classification schemes. Common practices that directly limit the empirical type I error to no more than alpha do not satisfy the type I error control objective because the resulting classifiers are still likely to have type I errors much larger than alpha. As a result, the NP paradigm has not been properly implemented for many classification scenarios in practice. In this work, we develop the first umbrella algorithm that implements the NP paradigm for all scoring-type classification methods, including popular methods such as logistic regression, support vector machines and random forests. Powered by this umbrella algorithm, we propose a novel graphical tool for NP classification methods: NP receiver operating characteristic (NP-ROC) bands, motivated by the popular receiver operating characteristic (ROC) curves. NP-ROC bands will help choose in a data adaptive way and compare different NP classifiers.
Author: Yang Feng, Jingyi Jessica Li, Xin Tong, and Ye Tian
Maintainer: Yang Feng <yang.feng@columbia.edu>

Diff between nproc versions 2.1.1 dated 2018-02-13 and 2.1.4 dated 2018-11-16

 ChangeLog                 |    2 
 DESCRIPTION               |   12 
 MD5                       |   20 -
 R/npc.R                   |   17 -
 R/npfuns.R                |  584 +++++++++++++++++++++++-----------------------
 R/nproc.R                 |    1 
 build/vignette.rds        |binary
 man/npc.Rd                |   13 -
 man/nproc.Rd              |    6 
 man/rocCV.Rd              |    6 
 vignettes/nproc-demo.html |  280 ++++++++++++++++++----
 11 files changed, 575 insertions(+), 366 deletions(-)

More information about nproc at CRAN
Permanent link

New package pterrace with initial version 1.0
Package: pterrace
Type: Package
Title: Persistence Terrace for Topological Data Analysis
Version: 1.0
Author: Chul Moon
Maintainer: Chul Moon <chulm@smu.edu>
Description: Plot the summary graphic called the persistence terrace for topological inference. It also provides the aid tool called the terrace area plot for determining the number of significant topological features. Moon, C., Giansiracusa, N., and Lazar, N. A. (2018) <doi:10.1080/10618600.2017.1422432>.
Encoding: UTF-8
License: GPL-2
RoxygenNote: 6.0.1
Imports: TDA, doParallel, foreach, plotly, viridis
NeedsCompilation: no
Packaged: 2018-11-07 22:03:38 UTC; Chul
Repository: CRAN
Date/Publication: 2018-11-16 17:20:03 UTC

More information about pterrace at CRAN
Permanent link

New package psymonitor with initial version 0.0.1
Type: Package
Package: psymonitor
Title: Real Time Monitoring of Asset Markets: Bubbles and Crisis
Version: 0.0.1
Authors@R: c(person(given = "Peter", family = "C.B. Phillips", role = "aut"), person(given = "Shuping", family = "Shi", role = "aut"), person(given = "Itamar", family = "Caspi", role = c("aut", "cre"), email = "caspi.itamar@gmail.com"))
Description: Apply the popular real-time monitoring strategy proposed by Phillips, Shi and Yu (2015a,b;PSY) <doi:10.1111/iere.12132>, <doi:10.1111/iere.12131>, along with a new bootstrap procedure designed to mitigate the potential impact of heteroskedasticity and to effect family-wise size control in recursive testing algorithms (Phillips and Shi, forthcoming).
License: GPL-3
URL: https://github.com/itamarcaspi/psymonitor
BugReports: https://github.com/itamarcaspi/psymonitor/issues
Depends: R (>= 3.2.0)
Imports: doParallel, foreach, magrittr, parallel
Suggests: ggplot2, knitr, lubridate, rmarkdown, spelling, testthat,
VignetteBuilder: knitr
Encoding: UTF-8
Language: en-US
LazyData: true
RoxygenNote: 6.1.0
NeedsCompilation: no
Packaged: 2018-11-07 14:33:37 UTC; user
Author: Peter C.B. Phillips [aut], Shuping Shi [aut], Itamar Caspi [aut, cre]
Maintainer: Itamar Caspi <caspi.itamar@gmail.com>
Repository: CRAN
Date/Publication: 2018-11-16 17:20:06 UTC

More information about psymonitor at CRAN
Permanent link

New package ipcwswitch with initial version 1.0.1
Package: ipcwswitch
Title: Inverse Probability of Censoring Weights to Deal with Treatment Switch in Randomized Clinical Trials
Version: 1.0.1
Authors@R: c(person("Nathalie", "Graffeo", email = "nathalie.graffeo@univ-amu.fr", role = c("aut", "cre")), person("Aurelien", "Latouche", role=c("aut")), person("Sylvie", "Chevret", role=c("aut")))
Maintainer: Nathalie Graffeo <nathalie.graffeo@univ-amu.fr>
Description: Contains functions for formatting clinical trials data and implementing inverse probability of censoring weights to handle treatment switches when estimating causal treatment effect in randomized clinical trials.
Depends: R (>= 2.10), survival (>= 2.42)
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.0
Imports: stats
NeedsCompilation: no
Packaged: 2018-11-07 19:27:59 UTC; Nathalie
Author: Nathalie Graffeo [aut, cre], Aurelien Latouche [aut], Sylvie Chevret [aut]
Repository: CRAN
Date/Publication: 2018-11-16 17:20:10 UTC

More information about ipcwswitch at CRAN
Permanent link

New package TGS with initial version 1.0.0
Package: TGS
Title: Rapid Reconstruction of Time-Varying Gene Regulatory Networks
Version: 1.0.0
Authors@R: c(person("Manan", "Gupta", , "guptamanan100@gmail.com", c("aut", "cre")),person("Saptarshi", "Pyne", ,"saptarshipyne01@gmail.com", role = "aut"),person("Alok", "Kumar", ,"alok4039@gmail.com", role = "aut"), person("Ashish", "Anand", , "anand.ashish@iitg.ac.in", role = "aut"))
Description: Rapid advancement in high-throughput gene expression measurement technologies has resulted in genome- scale time series datasets. Uncovering the underlying temporal sequence of gene regulatory events in the form of time-varying Gene Regulatory Networks (GRNs) demands computationally fast, accurate and highly scalable algorithms. To provide a flexible framework in a significantly time-efficient manner, a novel algorithm, namely TGS (Ashish Anand et al., 2018 <doi:10.1109/TCBB.2018.2861698>), is proposed here. TGS is shown to consume only 29 minutes for a microarray dataset with 4028 genes. Moreover, it provides the flexibility and time-efficiency, without losing the accuracy. Nevertheless, TGS’s main memory requirement grows exponentially with the number of genes, which it tackles by restricting the maximum number of regulators for each gene. Relaxing this restriction remains an important challenge as the true number of regulators is not known a prior.
License: CC BY-NC-SA 4.0
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
biocViews:
Imports: minet, stats, base, utils, bnstruct, ggm, foreach, doParallel, rjson
Suggests: R.rsp
VignetteBuilder: R.rsp
NeedsCompilation: no
Packaged: 2018-11-07 11:12:19 UTC; cse
Author: Manan Gupta [aut, cre], Saptarshi Pyne [aut], Alok Kumar [aut], Ashish Anand [aut]
Maintainer: Manan Gupta <guptamanan100@gmail.com>
Repository: CRAN
Date/Publication: 2018-11-16 16:10:13 UTC

More information about TGS at CRAN
Permanent link

Package tcpl updated to version 2.0.1 with previous version 2.0.0 dated 2018-11-10

Title: ToxCast Data Analysis Pipeline
Description: A set of tools for processing and modeling high-throughput and high-content chemical screening data. The package was developed for the the chemical screening data generated by the US EPA ToxCast program, but can be used for diverse chemical screening efforts.
Author: Richard S Judson [cre, ths], Dayne L Filer [aut], Jason Brown [ctb], Parth Kothiya [ctb], Woodrow R Setzer [ctb], Matthew T Martin [ctb, ths]
Maintainer: Richard S Judson <Judson.Richard@epa.gov>

Diff between tcpl versions 2.0.0 dated 2018-11-10 and 2.0.1 dated 2018-11-16

 DESCRIPTION                   |    6 +--
 MD5                           |   12 +++---
 NEWS                          |    5 ++
 inst/doc/Data_processing.R    |   84 +++++++++++++++++++++++-------------------
 inst/doc/Data_processing.Rmd  |   76 +++++++++++++++++++++-----------------
 inst/doc/Data_processing.html |   58 ++++++++++++++---------------
 vignettes/Data_processing.Rmd |   76 +++++++++++++++++++++-----------------
 7 files changed, 176 insertions(+), 141 deletions(-)

More information about tcpl at CRAN
Permanent link

New package survELtest with initial version 1.0.0
Package: survELtest
Title: Comparing Multiple Survival Functions via Empirical Likelihood (EL) Based Tests
Version: 1.0.0
Description: Contains routines for computing the one-sided/two-sided integrated/maximally selected EL statistics for simultaneous testing, the one-sided/two-sided EL tests for pointwise testing, and an initial test that precedes one-sided testing to exclude the possibility of crossings or alternative orderings.
Depends: R (>= 2.13.0)
Imports: Iso, nloptr, methods, plyr, survival, stats
License: GPL (>= 2)
LazyData: true
Encoding: UTF-8
Author: Hsin-wen Chang [aut, cre] <hwchang@stat.sinica.edu.tw>
Maintainer: Guo-You Lan <jj6020770416jj@gmail.com>
Archs: i386, x64
RoxygenNote: 6.1.0
NeedsCompilation: no
Packaged: 2018-11-07 01:24:22 UTC; Wally
Repository: CRAN
Date/Publication: 2018-11-16 16:40:02 UTC

More information about survELtest at CRAN
Permanent link

Package rmytarget updated to version 2.0.0 with previous version 1.1.1 dated 2018-11-09

Title: Load Data from 'MyTarget API'
Description: Allows work with 'MyTarget API v2' <https://target.my.com/doc/apiv2/ru/detailed.html> and load data by ads, campaigns, agency clients and statistic from your ads account.
Author: Alexey Seleznev
Maintainer: Alexey Seleznev <selesnow@gmail.com>

Diff between rmytarget versions 1.1.1 dated 2018-11-09 and 2.0.0 dated 2018-11-16

 rmytarget-1.1.1/rmytarget/R/myTarGetTotalStats.R    |only
 rmytarget-1.1.1/rmytarget/man/myTarGetTotalStats.Rd |only
 rmytarget-2.0.0/rmytarget/DESCRIPTION               |   12 -
 rmytarget-2.0.0/rmytarget/MD5                       |   22 +-
 rmytarget-2.0.0/rmytarget/NAMESPACE                 |    5 
 rmytarget-2.0.0/rmytarget/R/myTarAuth.R             |  133 ++++++++------
 rmytarget-2.0.0/rmytarget/R/myTarGetAdList.R        |   48 +++--
 rmytarget-2.0.0/rmytarget/R/myTarGetCampaignList.R  |   45 ++--
 rmytarget-2.0.0/rmytarget/R/myTarGetClientList.R    |   56 ++++-
 rmytarget-2.0.0/rmytarget/R/myTarGetStats.R         |  187 ++++++++++++++------
 rmytarget-2.0.0/rmytarget/build/partial.rdb         |binary
 rmytarget-2.0.0/rmytarget/man/myTarGetStats.Rd      |  183 ++++++++++++++++++-
 rmytarget-2.0.0/rmytarget/man/rmytarget-package.Rd  |   65 ++++--
 13 files changed, 545 insertions(+), 211 deletions(-)

More information about rmytarget at CRAN
Permanent link

New package qkerntool with initial version 1.17
Package: qkerntool
Title: Q-Kernel-Based and Conditionally Negative Definite Kernel-Based Machine Learning Tools
Version: 1.17
Authors@R: c(person("Yusen", "Zhang", role = c("aut", "cre"), email = "yusenzhang@126.com", comment = c(ORCID = "0000-0003-3842-1153")), person("Daolin","Pang", role = c("ctb")), person("Jinghao", "Wang", role = c("ctb")), person("Jialin", "Zhang", role = c("ctb")))
Description: Nonlinear machine learning tool for classification, clustering and dimensionality reduction. It integrates 12 q-kernel functions and 14 conditional negative definite kernel functions and includes the q-kernel and conditional negative definite kernel version of density-based spatial clustering of applications with noise, spectral clustering, generalized discriminant analysis, principal component analysis, multidimensional scaling, locally linear embedding, sammon's mapping and t-Distributed stochastic neighbor embedding.
Depends: R (>= 3.0.1)
Imports: stats, class, MASS, graphics, methods
License: GPL (>= 2)
Encoding: UTF-8
LazyData: true
Maintainer: Yusen Zhang <yusenzhang@126.com>
RoxygenNote: 6.1.0
NeedsCompilation: no
Packaged: 2018-11-07 07:53:00 UTC; Administrator
Author: Yusen Zhang [aut, cre] (<https://orcid.org/0000-0003-3842-1153>), Daolin Pang [ctb], Jinghao Wang [ctb], Jialin Zhang [ctb]
Repository: CRAN
Date/Publication: 2018-11-16 16:40:06 UTC

More information about qkerntool at CRAN
Permanent link

New package pammtools with initial version 0.1.7
Package: pammtools
Title: Piece-Wise Exponential Additive Mixed Modeling Tools
Version: 0.1.7
Date: 2018-11-02
Authors@R: c( person("Andreas", "Bender", , "andreas.bender@stat.uni-muenchen.de", role = c("aut", "cre"), comment=c(ORCID = "0000-0001-5628-8611")), person("Fabian", "Scheipl", , "fabian.scheipl@stat.uni-muenchen.de", role = c("aut")))
Description: Functions that facilitate fitting piece-wise exponential (additive mixed) models (Bender and Scheipl (2018) <doi: 10.1177/1471082X17748083>). This includes restructuring the data to the needed format and various convenience functions, e.g., for plotting the results.
Depends: R (>= 3.3.0)
Imports: mgcv, survival (>= 2.39-5), checkmate, magrittr, rlang, tidyr (>= 0.7.0), ggplot2, dplyr (>= 0.7.0), purrr (>= 0.2.3), tibble, msm, lazyeval, Formula, mvtnorm
Suggests: RColorBrewer, scam, coxme, testthat, timereg, knitr, rmarkdown, grid, gridExtra, covr
License: MIT + file LICENSE
LazyData: true
URL: https://github.com/adibender/pammtools
BugReports: https://github.com/adibender/pammtools/issues
RoxygenNote: 6.1.0
Encoding: UTF-8
NeedsCompilation: no
Packaged: 2018-11-06 13:06:00 UTC; andreasb
Author: Andreas Bender [aut, cre] (<https://orcid.org/0000-0001-5628-8611>), Fabian Scheipl [aut]
Maintainer: Andreas Bender <andreas.bender@stat.uni-muenchen.de>
Repository: CRAN
Date/Publication: 2018-11-16 16:10:03 UTC

More information about pammtools at CRAN
Permanent link

New package mltest with initial version 1.0.1
Package: mltest
Title: Classification Evaluation Metrics
Version: 1.0.1
Authors@R: person("G.", "Dudnik", email = "gl.dudnik@gmail.com", role = c("aut", "cre", "cph"))
Description: A fast, robust and easy-to-use calculation of multi-class classification evaluation metrics based on confusion matrix.
License: GPL-2
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.0
NeedsCompilation: no
Packaged: 2018-11-07 14:07:48 UTC; fcku
Author: G. Dudnik [aut, cre, cph]
Maintainer: G. Dudnik <gl.dudnik@gmail.com>
Repository: CRAN
Date/Publication: 2018-11-16 17:00:03 UTC

More information about mltest at CRAN
Permanent link

New package instruments with initial version 0.1.0
Package: instruments
Type: Package
Title: Estimate Regression Models with Instrumental Variables
Version: 0.1.0
Author: Alex Pavlakis
Maintainer: Alex Pavlakis <alexpavlakis@gmail.com>
Description: A consistent API for estimating linear and generalized linear models with instrumental variables.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.0.1.9000
Suggests: testthat
Depends: R (>= 2.10)
NeedsCompilation: no
Packaged: 2018-11-06 17:10:10 UTC; alexpavlakis
Repository: CRAN
Date/Publication: 2018-11-16 16:10:09 UTC

More information about instruments at CRAN
Permanent link

Package GENEAclassify updated to version 1.4.16 with previous version 1.4.14 dated 2018-08-13

Title: Segmentation and Classification of Accelerometer Data
Description: Segmentation and classification procedures for data from the 'Activinsights GENEActiv' <https://www.activinsights.com/products/geneactiv/> accelerometer that provides the user with a model to guess behaviour from test data where behaviour is missing. Includes a step counting algorithm, a function to create segmented data with custom features and a function to use recursive partitioning provided in the function rpart() of the 'rpart' package to create classification models.
Author: Chris Campbell [aut], Aimee Gott [aut], Joss Langford [aut], Charles Sweetland [aut, cre], Activinsights Ltd [cph]
Maintainer: Charles Sweetland <charles@sweetland-solutions.co.uk>

Diff between GENEAclassify versions 1.4.14 dated 2018-08-13 and 1.4.16 dated 2018-11-16

 DESCRIPTION             |    8 +-
 MD5                     |   31 ++++++-----
 NAMESPACE               |    3 +
 R/classifyGENEA.R       |    7 ++
 R/dataImport.R          |   14 +++-
 R/getGENEAsegments.R    |   27 ++++++---
 R/segmentation.R        |  117 ++++++++++++++++++++++++++++++++++-------
 R/statistics.R          |   48 +++++++++++++++++
 R/stepCounter.R         |  135 ++++++++++++++++++++++++++----------------------
 man/GENEAamplitude.Rd   |only
 man/GENEAdistance.Rd    |only
 man/GENEAwavelength.Rd  |only
 man/classifyGENEA.Rd    |   27 +++++----
 man/dataImport.Rd       |    5 +
 man/getGENEAsegments.Rd |   25 +++++---
 man/segmentation.Rd     |   22 ++++---
 man/stepCounter.Rd      |    3 -
 man/stepCounter2.Rd     |    9 +--
 18 files changed, 334 insertions(+), 147 deletions(-)

More information about GENEAclassify at CRAN
Permanent link

New package evtclass with initial version 1.0
Package: evtclass
Title: Extreme Value Theory for Open Set Classification - GPD and GEV Classifiers
Version: 1.0
Authors@R: person("Edoardo", "Vignotto", email = "edoardo.vignotto@unige.ch", role = c("aut", "cre"), comment = c(ORCID = "0000-0001-9870-8020"))
Description: Two classifiers for open set recognition and novelty detection based on extreme value theory. The first classifier is based on the generalized Pareto distribution (GPD) and the second classifier is based on the generalized extreme value (GEV) distribution. For details, see Vignotto, E., & Engelke, S. (2018) <arXiv:1808.09902>.
Depends: R (>= 3.4.0)
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.0.9000
Imports: RANN, evd, fitdistrplus
NeedsCompilation: no
Packaged: 2018-11-07 10:28:50 UTC; vignotto
Author: Edoardo Vignotto [aut, cre] (<https://orcid.org/0000-0001-9870-8020>)
Maintainer: Edoardo Vignotto <edoardo.vignotto@unige.ch>
Repository: CRAN
Date/Publication: 2018-11-16 16:40:11 UTC

More information about evtclass at CRAN
Permanent link

New package BivRec with initial version 1.0.0
Package: BivRec
Type: Package
Title: Bivariate Alternating Recurrent Event Data Analysis
Date: 2018-10-31
Version: 1.0.0
Authors@R: c(person("Sandra", "Castro-Pearson", email= "cast0135@umn.edu", role = c("aut", "cre")), person("Chi-Hyun", "Lee", email = "chihyunlee@umass.edu", role ="aut"), person("Chiung-Yu", "Huang", email = "chiungyu.huang@ucsf.edu", role = "aut"), person("Xianghua", "Luo", email = "luox0054@umn.edu", role = "ctb"))
Author: Sandra Castro-Pearson [aut, cre], Chi-Hyun Lee [aut], Chiung-Yu Huang [aut], Xianghua Luo [ctb]
Maintainer: Sandra Castro-Pearson <cast0135@umn.edu>
Description: Alternating recurrent event data arise frequently in biomedical and social sciences where 2 types of events such as hospital admissions and discharge occur alternatively over time. As such we implement a collection of non-parametric and semiparametric methods to analyze such data. The main functions are biv.rec.fit() and biv.rec.np(). Use biv.rec.fit() for estimation of covariate effects on the two alternating event gap times (xij and yij) using semiparametric methods. The method options are "Lee.et.al" and "Chang". Use biv.rec.np() for estimation of the joint cumulative distribution function (cdf) for the two alternating events gap times (xij and yij) as well as the marginal survival function for type I gap times (xij) and the conditional cdf of the type II gap times (yij) given an interval of type I gap times (xij) in a non-parametric fashion. The package also provides options to simulate and visualize the data and results of analysis.
BugReports: https://github.com/SandraCastroPearson/BivRec/issues
Depends: R (>= 3.2.0), survival, stats
Imports: MASS, stringr, utils, knitr, rmarkdown, Rcpp, graphics, grDevices
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.0
LinkingTo: Rcpp
NeedsCompilation: yes
Packaged: 2018-11-06 17:33:18 UTC; pearsons0519
Repository: CRAN
Date/Publication: 2018-11-16 16:10:17 UTC

More information about BivRec at CRAN
Permanent link

Package REAT updated to version 2.1.1 with previous version 2.1.0 dated 2018-10-17

Title: Regional Economic Analysis Toolbox
Description: Collection of models and analysis methods used in regional and urban economics and (quantitative) economic geography, e.g. measures of inequality, regional disparities and convergence, regional specialization as well as accessibility and spatial interaction models.
Author: Thomas Wieland
Maintainer: Thomas Wieland <thomas.wieland.geo@googlemail.com>

Diff between REAT versions 2.1.0 dated 2018-10-17 and 2.1.1 dated 2018-11-16

 DESCRIPTION             |    9 ++++-----
 MD5                     |   28 ++++++++++++++++++----------
 NAMESPACE               |    2 +-
 R/conc.R                |only
 R/curvefit.R            |only
 R/locq.R                |    4 ++--
 R/locq.growth.R         |only
 R/shiftd.R              |    2 +-
 R/shiftid.R             |only
 data/EU28.emp.rda       |binary
 data/G.counties.gdp.rda |binary
 man/conc.Rd             |only
 man/curvefit.Rd         |only
 man/locq.Rd             |   10 +++++++---
 man/locq.growth.Rd      |only
 man/portfolio.Rd        |    2 +-
 man/shiftd.Rd           |   10 ++++++++--
 man/shifti.Rd           |    2 +-
 man/shiftid.Rd          |only
 19 files changed, 43 insertions(+), 26 deletions(-)

More information about REAT at CRAN
Permanent link

New package randcorr with initial version 1.0
Package: randcorr
Type: Package
Title: Generate a Random p x p Correlation Matrix
Version: 1.0
Date: 2018-11-07
Author: Daniel F. Schmidt [aut, cph, cre], Enes Makalic [aut, cph]
Maintainer: Daniel F. Schmidt <daniel.schmidt@monash.edu>
Description: Implements the algorithm by Pourahmadi and Wang (2015) <doi:10.1016/j.spl.2015.06.015> for generating a random p x p correlation matrix. Briefly, the idea is to represent the correlation matrix using Cholesky factorization and p(p-1)/2 hyperspherical coordinates (i.e., angles), sample the angles from a particular distribution and then convert to the standard correlation matrix form. The angles are sampled from a distribution with pdf proportional to sin^k(theta) (0 < theta < pi, k >= 1) using the efficient sampling algorithm described in Enes Makalic and Daniel F. Schmidt (2018) <arXiv:1809.05212>.
License: GPL (>= 3)
Authors@R: c( person("Daniel F. Schmidt", email="daniel.schmidt@monash.edu", role = c("aut","cph","cre")), person("Enes Makalic", email="emakalic@unimelb.edu.au", role=c("aut","cph")) )
RoxygenNote: 6.0.1
NeedsCompilation: no
Packaged: 2018-11-07 00:30:09 UTC; dschmidt
Repository: CRAN
Date/Publication: 2018-11-16 15:30:03 UTC

More information about randcorr at CRAN
Permanent link

New package pkgsearch with initial version 2.0.0
Package: pkgsearch
Title: Search CRAN R Packages
Version: 2.0.0
Authors@R: c(person("Gábor", "Csárdi", email = "csardi.gabor@gmail.com", role = c("aut", "cre")))
Description: Search CRAN R packages. Uses the 'METACRAN' search server, see <https://r-pkg.org>.
License: MIT + file LICENSE
LazyData: true
URL: https://github.com/metacran/pkgsearch#readme
BugReports: https://github.com/metacran/pkgsearch/issues
Imports: magrittr, httr, jsonlite, parsedate, prettyunits
Suggests: covr, testthat, tibble
Encoding: UTF-8
RoxygenNote: 6.1.0
NeedsCompilation: no
Packaged: 2018-11-07 11:20:26 UTC; gaborcsardi
Author: Gábor Csárdi [aut, cre]
Maintainer: Gábor Csárdi <csardi.gabor@gmail.com>
Repository: CRAN
Date/Publication: 2018-11-16 16:00:03 UTC

More information about pkgsearch at CRAN
Permanent link

New package lcc with initial version 1.0
Package: lcc
Type: Package
Title: Longitudinal Concordance Correlation
Version: 1.0
Authors@R: c(person("Thiago", "de Paula Oliveira", role=c("aut", "cre"), email = "thiago.paula.oliveira@usp.br"), person("Rafael","de Andrade Moral", role="aut"), person( "John","Hinde",role="aut"), person("Silvio", "Sandoval Zocchi", role=c("aut","ctb")), person("Clarice", "Garcia Borges Demetrio", role=c("aut", "ctb")))
Author: Thiago de Paula Oliveira [aut, cre], Rafael de Andrade Moral [aut], John Hinde [aut], Silvio Sandoval Zocchi [aut, ctb], Clarice Garcia Borges Demetrio [aut, ctb]
Maintainer: Thiago de Paula Oliveira <thiago.paula.oliveira@usp.br>
Description: Estimates the longitudinal concordance correlation to access the longitudinal agreement profile. The estimation approach implemented is variance components approach based on polynomial mixed effects regression model, as proposed by Oliveira, Hinde and Zocchi (2018) <doi:10.1007/s13253-018-0321-1>. In addition, non-parametric confidence intervals were implemented using percentile method or normal-approximation based on Fisher Z-transformation.
Date: 2018-11-05
Depends: R (>= 3.2.3), nlme (>= 3.1-124), ggplot2 (>= 2.2.1), grid (>= 3.2.3), gdata (>= 2.18.0)
Suggests: roxygen2 (>= 3.0.0)
License: GPL (>= 2)
Encoding: UTF-8
Repository: CRAN
NeedsCompilation: yes
LazyData: true
RoxygenNote: 6.1.0
Packaged: 2018-11-06 11:37:34 UTC; thiago
Date/Publication: 2018-11-16 16:00:07 UTC

More information about lcc at CRAN
Permanent link

New package IRkernel with initial version 0.8.14
Package: IRkernel
Title: Native R Kernel for the 'Jupyter Notebook'
Description: The R kernel for the 'Jupyter' environment executes R code which the front-end ('Jupyter Notebook' or other front-ends) submits to the kernel via the network.
Version: 0.8.14
Authors@R: c( person('Thomas', 'Kluyver', role = c('aut', 'cph'), email = 'thomas@kluyver.me.uk'), person('Philipp', 'Angerer', role = c('aut', 'cph', 'cre'), email = 'phil.angerer@gmail.com'), person('Jan', 'Schulz', role = c('aut', 'cph'), email = 'jasc@gmx.net'), person('Karthik', 'Ram', role = c('aut', 'cph'), email = 'karthik.ram@gmail.com'))
Depends: R (>= 3.2.0)
Suggests: testthat, roxygen2
SystemRequirements: jupyter, jupyter_kernel_test (Python package for testing)
License: MIT + file LICENSE
LazyData: true
Encoding: UTF-8
Imports: repr (>= 0.4.99), methods, evaluate (>= 0.10), IRdisplay (>= 0.3.0.9999), pbdZMQ (>= 0.2-1), crayon, jsonlite (>= 0.9.6), uuid, digest
Collate: 'class_unions.r' 'logging.r' 'comm_manager.r' 'compat.r' 'environment_runtime.r' 'environment_shadow.r' 'options.r' 'execution.r' 'handlers.r' 'help.r' 'installspec.r' 'utils.r' 'kernel.r' 'main.r' 'onload.r'
RoxygenNote: 6.1.0
NeedsCompilation: no
Packaged: 2018-11-06 17:40:59 UTC; phil
Author: Thomas Kluyver [aut, cph], Philipp Angerer [aut, cph, cre], Jan Schulz [aut, cph], Karthik Ram [aut, cph]
Maintainer: Philipp Angerer <phil.angerer@gmail.com>
Repository: CRAN
Date/Publication: 2018-11-16 15:30:06 UTC

More information about IRkernel at CRAN
Permanent link

Package GENEAread updated to version 2.0.6 with previous version 2.0.5 dated 2018-07-17

Title: Package for Reading Binary Files
Description: Functions and analytics for GENEA-compatible accelerometer data into R objects. See topic 'GENEAread' for an introduction to the package.
Author: Zhou Fang [aut], Joss Langford [aut], Charles Sweetland [aut, cre]
Maintainer: Charles Sweetland <charles@sweetland-solutions.co.uk>

Diff between GENEAread versions 2.0.5 dated 2018-07-17 and 2.0.6 dated 2018-11-16

 DESCRIPTION                |   20 ++++++++----------
 MD5                        |   24 ++++++++++++----------
 NAMESPACE                  |    3 +-
 R/GENEActiv.calibrate.r    |only
 R/Recalibrate.R            |   24 ++++++++++++----------
 R/header.info.R            |   33 +++++++++++++++++-------------
 R/read.bin.R               |   49 +++++++++++++++++++++++++++++++++------------
 R/stftmod.R                |   10 ++++-----
 man/GENEActiv.calibrate.Rd |only
 man/Recalibrate.Rd         |   18 +++++++++++-----
 man/g.downsample.Rd        |only
 man/plot.stft.Rd           |only
 man/seq.log.Rd             |    4 +--
 man/stft.Rd                |    1 
 man/stftcalc.Rd            |    6 ++---
 15 files changed, 116 insertions(+), 76 deletions(-)

More information about GENEAread at CRAN
Permanent link

Package easyCODA updated to version 0.28 with previous version 0.25 dated 2018-08-03

Title: Compositional Data Analysis in Practice
Description: Univariate and multivariate methods for compositional data analysis, based on logratios.
Author: Michael Greenacre
Maintainer: Michael Greenacre <michael.greenacre@upf.edu>

Diff between easyCODA versions 0.25 dated 2018-08-03 and 0.28 dated 2018-11-16

 DESCRIPTION       |   12 ++++++------
 MD5               |   16 ++++++++++------
 R/CA.r            |only
 R/LRA.r           |    4 +++-
 R/PLOT.CA.r       |only
 R/PLOT.PCA.r      |    7 +++++--
 R/STEP.r          |   54 +++++++++++++++++++++++++++---------------------------
 build/partial.rdb |binary
 man/CA.Rd         |only
 man/PLOT.CA.Rd    |only
 man/STEP.Rd       |   27 +++++++++++++++------------
 11 files changed, 66 insertions(+), 54 deletions(-)

More information about easyCODA at CRAN
Permanent link

Package RcppGetconf updated to version 0.0.3 with previous version 0.0.2 dated 2016-08-01

Title: 'Rcpp' Interface for Querying System Configuration Variables
Description: The 'getconf' command-line tool provided by 'libc' allows querying of a large number of system variables. This package provides similar functionality.
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel <edd@debian.org>

Diff between RcppGetconf versions 0.0.2 dated 2016-08-01 and 0.0.3 dated 2018-11-16

 ChangeLog           |   12 ++++++++++++
 DESCRIPTION         |   10 +++++-----
 MD5                 |   18 +++++++++---------
 R/RcppExports.R     |   20 ++++++++++++--------
 README.md           |    6 ++++--
 inst/NEWS.Rd        |    6 ++++++
 man/getAll.Rd       |   11 ++++++-----
 man/getConfig.Rd    |   13 +++++++------
 src/RcppExports.cpp |   35 +++++++++++++++++++++++------------
 src/getconf.cpp     |   14 +++++++++-----
 10 files changed, 93 insertions(+), 52 deletions(-)

More information about RcppGetconf at CRAN
Permanent link

Package MIXFIM updated to version 1.1 with previous version 1.0 dated 2015-08-31

Title: Evaluation of the FIM in NLMEMs using MCMC
Description: Evaluation and optimization of the Fisher Information Matrix in NonLinear Mixed Effect Models using Markov Chains Monte Carlo for continuous and discrete data.
Author: Marie-Karelle Riviere-Jourdan and France Mentre <france.mentre@inserm.fr>
Maintainer: Marie-Karelle Riviere-Jourdan <eldamjh@gmail.com>

Diff between MIXFIM versions 1.0 dated 2015-08-31 and 1.1 dated 2018-11-16

 DESCRIPTION                         |    8 
 MD5                                 |   18 
 R/MIXFIM.R                          | 1265 ++++++++++++++++++------------------
 inst/extdata/model_b_given_y.stan   |    6 
 inst/extdata/model_derivatives.stan |    4 
 inst/extdata/model_y.stan           |    8 
 man/MIXFIM-package.Rd               |   48 -
 man/fisher_evaluation.Rd            |  154 ++--
 man/fisher_optimization.Rd          |  156 ++--
 man/template_model.Rd               |  105 +-
 10 files changed, 922 insertions(+), 850 deletions(-)

More information about MIXFIM at CRAN
Permanent link

Package NLMR updated to version 0.4 with previous version 0.3.2 dated 2018-10-02

Title: Simulating Neutral Landscape Models
Description: Provides neutral landscape models (<doi:10.1007/BF02275262>, <http://sci-hub.tw/10.1007/bf02275262>). Neutral landscape models range from "hard" neutral models (completely random distributed), to "soft" neutral models (definable spatial characteristics) and generate landscape patterns that are independent of ecological processes. Thus, these patterns can be used as null models in landscape ecology. 'nlmr' combines a large number of algorithms from other published software for simulating neutral landscapes. The simulation results are obtained in a geospatial data format (raster* objects from the 'raster' package) and can, therefore, be used in any sort of raster data operation that is performed with standard observation data.
Author: Marco Sciaini [aut, cre] (<https://orcid.org/0000-0002-3042-5435>), Matthias Fritsch [aut], Craig Simpkins [aut] (<https://orcid.org/0000-0003-3212-1379>), Cédric Scherer [aut] (<https://orcid.org/0000-0003-0465-2543>), Sebastian Hanß [aut] (<https://orcid.org/0000-0002-3990-4897>), Laura Graham [rev] (Laura reviewed the package for rOpenSci, see https://github.com/ropensci/onboarding/issues/188), Jeffrey Hollister [rev] (Jeffrey reviewed the package for rOpenSci, see https://github.com/ropensci/onboarding/issues/188)
Maintainer: Marco Sciaini <sciaini.marco@gmail.com>

Diff between NLMR versions 0.3.2 dated 2018-10-02 and 0.4 dated 2018-11-16

 NLMR-0.3.2/NLMR/vignettes/getstarted_cache        |only
 NLMR-0.3.2/NLMR/vignettes/getstarted_files        |only
 NLMR-0.4/NLMR/DESCRIPTION                         |   16 -
 NLMR-0.4/NLMR/MD5                                 |  103 +++----
 NLMR-0.4/NLMR/NAMESPACE                           |    2 
 NLMR-0.4/NLMR/NEWS.md                             |   11 
 NLMR-0.4/NLMR/R/NLMR.R                            |   45 +--
 NLMR-0.4/NLMR/R/RcppExports.R                     |only
 NLMR-0.4/NLMR/R/nlm_curds.R                       |  238 ++++++++---------
 NLMR-0.4/NLMR/R/nlm_distancegradient.R            |  178 ++++++-------
 NLMR-0.4/NLMR/R/nlm_edgegradient.R                |  176 ++++++-------
 NLMR-0.4/NLMR/R/nlm_fbm.R                         |  212 ++++++++-------
 NLMR-0.4/NLMR/R/nlm_gaussianfield.R               |  220 ++++++++--------
 NLMR-0.4/NLMR/R/nlm_mosaicfield.R                 |    2 
 NLMR-0.4/NLMR/R/nlm_mosaicgibbs.R                 |  232 ++++++++---------
 NLMR-0.4/NLMR/R/nlm_mosaictess.R                  |  166 ++++++------
 NLMR-0.4/NLMR/R/nlm_mpd.R                         |   62 ----
 NLMR-0.4/NLMR/R/nlm_neigh.R                       |  297 ++++++++--------------
 NLMR-0.4/NLMR/R/nlm_percolation.R                 |  166 ++++++------
 NLMR-0.4/NLMR/R/nlm_planargradient.R              |  182 ++++++-------
 NLMR-0.4/NLMR/R/nlm_random.R                      |  132 ++++-----
 NLMR-0.4/NLMR/R/nlm_randomcluster.R               |    2 
 NLMR-0.4/NLMR/R/nlm_randomrectangularcluster.R    |  200 ++++++--------
 NLMR-0.4/NLMR/inst/doc/getstarted.R               |   20 -
 NLMR-0.4/NLMR/inst/doc/getstarted.Rmd             |   34 --
 NLMR-0.4/NLMR/inst/doc/getstarted.html            |   66 ++--
 NLMR-0.4/NLMR/man/NLMR-package.Rd                 |    1 
 NLMR-0.4/NLMR/man/nlm_curds.Rd                    |    4 
 NLMR-0.4/NLMR/man/nlm_distancegradient.Rd         |    2 
 NLMR-0.4/NLMR/man/nlm_edgegradient.Rd             |    2 
 NLMR-0.4/NLMR/man/nlm_fbm.Rd                      |    6 
 NLMR-0.4/NLMR/man/nlm_gaussianfield.Rd            |    2 
 NLMR-0.4/NLMR/man/nlm_mosaicfield.Rd              |    2 
 NLMR-0.4/NLMR/man/nlm_mosaicgibbs.Rd              |    2 
 NLMR-0.4/NLMR/man/nlm_mosaictess.Rd               |    2 
 NLMR-0.4/NLMR/man/nlm_mpd.Rd                      |    5 
 NLMR-0.4/NLMR/man/nlm_neigh.Rd                    |    4 
 NLMR-0.4/NLMR/man/nlm_percolation.Rd              |    2 
 NLMR-0.4/NLMR/man/nlm_planargradient.Rd           |    2 
 NLMR-0.4/NLMR/man/nlm_random.Rd                   |    2 
 NLMR-0.4/NLMR/man/nlm_randomcluster.Rd            |    2 
 NLMR-0.4/NLMR/man/nlm_randomrectangularcluster.Rd |    5 
 NLMR-0.4/NLMR/src                                 |only
 NLMR-0.4/NLMR/vignettes/getstarted.Rmd            |   34 --
 44 files changed, 1349 insertions(+), 1492 deletions(-)

More information about NLMR at CRAN
Permanent link

Package lori updated to version 1.0.0 with previous version 0.2.1 dated 2018-10-05

Title: Low-Rank Interaction Contingency Tables
Description: Analysis of count data with covariates. LORI uses a log-linear model where main row and column effects are decomposed as regression terms on known covariates. A residual low-rank interaction term is also fitted.
Author: Genevieve Robin [aut, cre]
Maintainer: Genevieve Robin <genevieve.robin@polytechnique.edu>

Diff between lori versions 0.2.1 dated 2018-10-05 and 1.0.0 dated 2018-11-16

 DESCRIPTION           |    8 
 MD5                   |   20 +-
 R/lori.R              |  493 ++++++++++++++++++++++++++++----------------------
 R/lori_plots.R        |    4 
 R/lori_tools.R        |   88 ++++++++
 inst/doc/example.html |  213 ---------------------
 man/altmin.Rd         |    8 
 man/lori.Rd           |   19 -
 man/plot_counts.Rd    |    2 
 man/plot_cov.Rd       |    2 
 man/qut.Rd            |    6 
 11 files changed, 402 insertions(+), 461 deletions(-)

More information about lori at CRAN
Permanent link

Package bibliometrix updated to version 2.0.2 with previous version 2.0.1 dated 2018-10-09

Title: An R-Tool for Comprehensive Science Mapping Analysis
Description: Tool for quantitative research in scientometrics and bibliometrics. It provides various routines for importing bibliographic data from SCOPUS (<http://scopus.com>), Clarivate Analytics Web of Science (<http://www.webofknowledge.com/>), Cochrane Library (<http://www.cochranelibrary.com/>) and PubMed (<https://www.ncbi.nlm.nih.gov/pubmed/>) databases, performing bibliometric analysis and building networks for co-citation, coupling, scientific collaboration and co-word analysis.
Author: Massimo Aria [cre, aut], Corrado Cuccurullo [aut]
Maintainer: Massimo Aria <aria@unina.it>

Diff between bibliometrix versions 2.0.1 dated 2018-10-09 and 2.0.2 dated 2018-11-16

 DESCRIPTION                         |    8 
 MD5                                 |   84 ++++----
 NAMESPACE                           |    4 
 NEWS                                |   23 ++
 R/biblioAnalysis.R                  |   14 -
 R/biblioNetwork.R                   |   10 
 R/bradford.R                        |only
 R/conceptualStructure.R             |   71 ++++--
 R/convert2df.R                      |    3 
 R/countries.R                       |    5 
 R/metaTagExtraction.R               |    2 
 R/networkPlot.R                     |   27 +-
 R/networkStat.R                     |  121 ++++++-----
 R/plotThematicEvolution.R           |    2 
 R/summary.bibliometrix.R            |    6 
 R/summary.bibliometrix_netstat.R    |  202 ++++++++++---------
 R/termExtraction.R                  |    5 
 R/thematicEvolution.R               |   36 +++
 R/thematicMap.R                     |   20 +
 build/partial.rdb                   |binary
 data/biblio.rda                     |binary
 data/biblio_df.rda                  |binary
 data/countries.rda                  |binary
 data/garfield.rda                   |binary
 data/isiCollection.rda              |binary
 data/scientometrics.rda             |binary
 data/scientometrics_text.rda        |binary
 data/scopusCollection.rda           |binary
 data/stopwords.rda                  |binary
 inst/biblioshiny/server.R           |  368 +++++++++++++++++++++++++++++++-----
 inst/biblioshiny/ui.R               |  271 ++++++++++++++++++++------
 inst/doc/bibliometrix-vignette.Rmd  |    2 
 inst/doc/bibliometrix-vignette.html |  169 +---------------
 man/biblioNetwork.Rd                |    4 
 man/bradford.Rd                     |only
 man/conceptualStructure.Rd          |   14 -
 man/countries.Rd                    |    5 
 man/networkPlot.Rd                  |    6 
 man/networkStat.Rd                  |    9 
 man/plotThematicEvolution.Rd        |    2 
 man/summary.bibliometrix.Rd         |    2 
 man/summary.bibliometrix_netstat.Rd |    2 
 man/thematicEvolution.Rd            |    6 
 vignettes/bibliometrix-vignette.Rmd |    2 
 44 files changed, 978 insertions(+), 527 deletions(-)

More information about bibliometrix at CRAN
Permanent link

Package jmv updated to version 0.9.5 with previous version 0.9.4 dated 2018-09-18

Title: The 'jamovi' Analyses
Description: A suite of common statistical methods such as descriptives, t-tests, ANOVAs, regression, correlation matrices, proportion tests, contingency tables, and factor analysis. This package is also useable from the 'jamovi' statistical spreadsheet (see <https://www.jamovi.org> for more information).
Author: Ravi Selker, Jonathon Love, Damian Dropmann
Maintainer: Jonathon Love <jon@thon.cc>

Diff between jmv versions 0.9.4 dated 2018-09-18 and 0.9.5 dated 2018-11-16

 jmv-0.9.4/jmv/data/bugs.csv.gz       |only
 jmv-0.9.5/jmv/DESCRIPTION            |   10 +--
 jmv-0.9.5/jmv/MD5                    |   96 +++++++++++++++++------------------
 jmv-0.9.5/jmv/R/ancova.b.R           |   14 +----
 jmv-0.9.5/jmv/R/ancova.h.R           |    2 
 jmv-0.9.5/jmv/R/anova.h.R            |    2 
 jmv-0.9.5/jmv/R/anovanp.h.R          |    6 +-
 jmv-0.9.5/jmv/R/anovaonew.b.R        |    8 --
 jmv-0.9.5/jmv/R/anovaonew.h.R        |    5 +
 jmv-0.9.5/jmv/R/anovarm.b.R          |   10 +--
 jmv-0.9.5/jmv/R/anovarm.h.R          |    2 
 jmv-0.9.5/jmv/R/anovarmnp.b.R        |    4 -
 jmv-0.9.5/jmv/R/anovarmnp.h.R        |    1 
 jmv-0.9.5/jmv/R/cfa.h.R              |    1 
 jmv-0.9.5/jmv/R/conttables.h.R       |    4 +
 jmv-0.9.5/jmv/R/conttablespaired.h.R |    3 +
 jmv-0.9.5/jmv/R/corrmatrix.b.R       |    4 -
 jmv-0.9.5/jmv/R/corrmatrix.h.R       |    1 
 jmv-0.9.5/jmv/R/descriptives.b.R     |   83 +++++++++++++++++-------------
 jmv-0.9.5/jmv/R/descriptives.h.R     |    2 
 jmv-0.9.5/jmv/R/efa.h.R              |   50 ++++++++++++++++--
 jmv-0.9.5/jmv/R/linreg.b.R           |   19 +-----
 jmv-0.9.5/jmv/R/linreg.h.R           |    2 
 jmv-0.9.5/jmv/R/loglinear.b.R        |    7 --
 jmv-0.9.5/jmv/R/loglinear.h.R        |    2 
 jmv-0.9.5/jmv/R/logregbin.b.R        |    7 --
 jmv-0.9.5/jmv/R/logregbin.h.R        |    3 +
 jmv-0.9.5/jmv/R/logregmulti.b.R      |    7 --
 jmv-0.9.5/jmv/R/logregmulti.h.R      |    3 +
 jmv-0.9.5/jmv/R/logregord.b.R        |    1 
 jmv-0.9.5/jmv/R/logregord.h.R        |    3 +
 jmv-0.9.5/jmv/R/mancova.b.R          |    4 -
 jmv-0.9.5/jmv/R/mancova.h.R          |    2 
 jmv-0.9.5/jmv/R/pca.b.R              |   68 +++++++++++++++++++-----
 jmv-0.9.5/jmv/R/pca.h.R              |   15 +++++
 jmv-0.9.5/jmv/R/proptest2.b.R        |    8 --
 jmv-0.9.5/jmv/R/proptest2.h.R        |    2 
 jmv-0.9.5/jmv/R/proptestn.h.R        |    2 
 jmv-0.9.5/jmv/R/reliability.b.R      |    4 -
 jmv-0.9.5/jmv/R/reliability.h.R      |    5 +
 jmv-0.9.5/jmv/R/ttestis.b.R          |    4 -
 jmv-0.9.5/jmv/R/ttestis.h.R          |    2 
 jmv-0.9.5/jmv/R/ttestones.b.R        |    4 -
 jmv-0.9.5/jmv/R/ttestones.h.R        |    1 
 jmv-0.9.5/jmv/R/ttestps.b.R          |    8 --
 jmv-0.9.5/jmv/R/ttestps.h.R          |    1 
 jmv-0.9.5/jmv/data/bugs.csv          |only
 jmv-0.9.5/jmv/man/anovaNP.Rd         |    2 
 jmv-0.9.5/jmv/man/efa.Rd             |   23 +++++---
 jmv-0.9.5/jmv/man/pca.Rd             |    9 ++-
 50 files changed, 320 insertions(+), 206 deletions(-)

More information about jmv at CRAN
Permanent link

Package reproducible updated to version 0.2.5 with previous version 0.2.3 dated 2018-08-07

Title: A Set of Tools that Enhance Reproducibility Beyond Package Management
Description: Collection of high-level, robust, machine- and OS-independent tools for making deeply reproducible and reusable content in R. This includes light weight package management (similar to 'packrat' and 'checkpoint', but more flexible, lightweight and simpler than both), tools for caching, downloading and verifying or writing checksums, post-processing of common spatial datasets, and accessing GitHub repositories. Some features are still under active development.
Author: Eliot J B McIntire [aut, cre] (<https://orcid.org/0000-0002-6914-8316>), Alex M Chubaty [aut] (<https://orcid.org/0000-0001-7146-8135>), Tati Micheletti [ctb] (<https://orcid.org/0000-0003-4838-8342>), Ceres Barros [ctb] (<https://orcid.org/0000-0003-4036-977X>), Ian Eddy [ctb] (<https://orcid.org/0000-0001-7397-2116>), Her Majesty the Queen in Right of Canada, as represented by the Minister of Natural Resources Canada [cph]
Maintainer: Eliot J B McIntire <eliot.mcintire@canada.ca>

Diff between reproducible versions 0.2.3 dated 2018-08-07 and 0.2.5 dated 2018-11-16

 DESCRIPTION                                |   37 
 MD5                                        |  143 +-
 NAMESPACE                                  |   34 
 NEWS.md                                    |   50 
 R/cache-helpers.R                          |  162 +-
 R/cache-tools.R                            |   54 
 R/cache.R                                  |   61 
 R/checksums.R                              |   37 
 R/consistentPaths.R                        |   11 
 R/convertPaths.R                           |    5 
 R/download.R                               |  240 ++-
 R/gis.R                                    |   59 
 R/git.R                                    |    7 
 R/helpers.R                                |   25 
 R/objectSize.R                             |    3 
 R/packages.R                               |  196 +--
 R/pipe.R                                   |   27 
 R/postProcess.R                            |  631 +++++++--
 R/preProcess.R                             |  693 +++++++++-
 R/prepInputs.R                             |  223 ++-
 R/reproducible-package.R                   |    1 
 R/robustDigest.R                           |   58 
 R/search.R                                 |   15 
 R/zzz.R                                    |   34 
 README.md                                  |   22 
 build/vignette.rds                         |binary
 inst/doc/Intro-to-Cache.html               | 1877 ++++++++++++++++-------------
 inst/examples/example_assessDataTypeGDAL.R |only
 man/Checksums.Rd                           |    3 
 man/Require.Rd                             |   86 -
 man/assessDataType.Rd                      |    6 
 man/assessDataTypeGDAL.Rd                  |only
 man/assessDataTypeGDALhelpers.Rd           |only
 man/available.packagesMem.Rd               |    5 
 man/cache.Rd                               |   30 
 man/checkCacheRepo.Rd                      |    4 
 man/checkPath.Rd                           |   12 
 man/checkoutVersion.Rd                     |    8 
 man/copyFile.Rd                            |   26 
 man/cropInputs.Rd                          |    8 
 man/determineFilename.Rd                   |    3 
 man/dlGeneric.Rd                           |    2 
 man/dot-formalsNotInCurrentDots.Rd         |only
 man/downloadFile.Rd                        |   12 
 man/extractFromArchive.Rd                  |   12 
 man/grepSysCalls.Rd                        |only
 man/guessAtTarget.Rd                       |    4 
 man/installPackages.Rd                     |    4 
 man/installVersions.Rd                     |   25 
 man/linkOrCopy.Rd                          |only
 man/maskInputs.Rd                          |    4 
 man/newLibPaths.Rd                         |    8 
 man/pkgDep.Rd                              |   15 
 man/postProcess.Rd                         |   11 
 man/preProcess.Rd                          |   16 
 man/prefix.Rd                              |    2 
 man/prepInputs.Rd                          |   16 
 man/projectInputs.Rd                       |    3 
 man/reproducible-package.Rd                |    7 
 man/robustDigest.Rd                        |   68 -
 man/search.Rd                              |   14 
 man/viewCache.Rd                           |   14 
 man/writeOutputs.Rd                        |   18 
 tests/testthat/helper-allEqual.R           |  129 +
 tests/testthat/test-cache.R                |  338 ++++-
 tests/testthat/test-cacheArguments.R       |   42 
 tests/testthat/test-checksums.R            |    5 
 tests/testthat/test-cluster.R              |    7 
 tests/testthat/test-download.R             |   13 
 tests/testthat/test-examples.R             |    8 
 tests/testthat/test-gis.R                  |   39 
 tests/testthat/test-misc.R                 |only
 tests/testthat/test-packages.R             |   39 
 tests/testthat/test-preProcessDoesntWork.R |only
 tests/testthat/test-preProcessMessages.R   |only
 tests/testthat/test-preProcessWorks.R      |only
 tests/testthat/test-prepInputs.R           |  772 ++++++++---
 tests/testthat/test-robustDigest.R         |only
 78 files changed, 4556 insertions(+), 1987 deletions(-)

More information about reproducible at CRAN
Permanent link

Package FossilSim updated to version 2.1.0 with previous version 2.0.0 dated 2018-07-28

Title: Simulation of Fossil and Taxonomy Data
Description: Simulating taxonomy and fossil data on phylogenetic trees under mechanistic models of speciation, preservation and sampling.
Author: Rachel Warnock [aut, cph], Joelle Barido-Sottani [aut, cre, cph], Walker Pett [aut, cph], O'Reilly Joseph [aut, cph]
Maintainer: Joelle Barido-Sottani <joelle.barido-sottani@m4x.org>

Diff between FossilSim versions 2.0.0 dated 2018-07-28 and 2.1.0 dated 2018-11-16

 FossilSim-2.0.0/FossilSim/man/plot.SAtree.Rd                           |only
 FossilSim-2.1.0/FossilSim/DESCRIPTION                                  |   13 
 FossilSim-2.1.0/FossilSim/MD5                                          |  174 -
 FossilSim-2.1.0/FossilSim/NAMESPACE                                    |  129 -
 FossilSim-2.1.0/FossilSim/NEWS.md                                      |only
 FossilSim-2.1.0/FossilSim/R/BEAST.output.R                             |only
 FossilSim-2.1.0/FossilSim/R/FossilSim.R                                |only
 FossilSim-2.1.0/FossilSim/R/SAtree.R                                   |  236 +-
 FossilSim-2.1.0/FossilSim/R/conversions.R                              | 1080 ++++-----
 FossilSim-2.1.0/FossilSim/R/fossils.R                                  |  160 -
 FossilSim-2.1.0/FossilSim/R/plot.asymmetric.tree.R                     |  453 ++--
 FossilSim-2.1.0/FossilSim/R/plot.fossils.R                             | 1078 ++++-----
 FossilSim-2.1.0/FossilSim/R/plot.taxonomy.R                            |  545 ++--
 FossilSim-2.1.0/FossilSim/R/reconcile.fossils.taxonomy.R               |  124 -
 FossilSim-2.1.0/FossilSim/R/sim.fbd.R                                  |  406 +--
 FossilSim-2.1.0/FossilSim/R/sim.fossils.R                              | 1096 +++++-----
 FossilSim-2.1.0/FossilSim/R/sim.interval.ages.R                        |  430 +--
 FossilSim-2.1.0/FossilSim/R/sim.taxonomy.R                             |  760 +++---
 FossilSim-2.1.0/FossilSim/R/sim.tip.sampling.R                         |  294 +-
 FossilSim-2.1.0/FossilSim/R/sim.trait.values.R                         |  358 +--
 FossilSim-2.1.0/FossilSim/R/subsampling.R                              |only
 FossilSim-2.1.0/FossilSim/R/taxonomy.R                                 |  197 -
 FossilSim-2.1.0/FossilSim/R/utils.R                                    |  563 ++---
 FossilSim-2.1.0/FossilSim/README.md                                    |   94 
 FossilSim-2.1.0/FossilSim/build/vignette.rds                           |binary
 FossilSim-2.1.0/FossilSim/inst/WORDLIST                                |   82 
 FossilSim-2.1.0/FossilSim/inst/doc/SAtree.R                            |   46 
 FossilSim-2.1.0/FossilSim/inst/doc/SAtree.Rmd                          |  119 -
 FossilSim-2.1.0/FossilSim/inst/doc/SAtree.html                         |  400 +--
 FossilSim-2.1.0/FossilSim/inst/doc/fossils.R                           |  582 ++---
 FossilSim-2.1.0/FossilSim/inst/doc/fossils.Rmd                         |  940 ++++----
 FossilSim-2.1.0/FossilSim/inst/doc/fossils.html                        | 1044 ++++-----
 FossilSim-2.1.0/FossilSim/inst/doc/intro.R                             |   62 
 FossilSim-2.1.0/FossilSim/inst/doc/intro.Rmd                           |  248 +-
 FossilSim-2.1.0/FossilSim/inst/doc/intro.html                          |  322 +-
 FossilSim-2.1.0/FossilSim/inst/doc/paleotree.R                         |   44 
 FossilSim-2.1.0/FossilSim/inst/doc/paleotree.Rmd                       |   92 
 FossilSim-2.1.0/FossilSim/inst/doc/paleotree.html                      |  707 +++---
 FossilSim-2.1.0/FossilSim/inst/doc/simfbd.R                            |   47 
 FossilSim-2.1.0/FossilSim/inst/doc/simfbd.Rmd                          |  116 -
 FossilSim-2.1.0/FossilSim/inst/doc/simfbd.html                         |  383 +--
 FossilSim-2.1.0/FossilSim/inst/doc/taxonomy.R                          |  112 -
 FossilSim-2.1.0/FossilSim/inst/doc/taxonomy.Rmd                        |  344 +--
 FossilSim-2.1.0/FossilSim/inst/doc/taxonomy.html                       |  470 ++--
 FossilSim-2.1.0/FossilSim/man/FossilSim.Rd                             |only
 FossilSim-2.1.0/FossilSim/man/SAtree.Rd                                |   32 
 FossilSim-2.1.0/FossilSim/man/SAtree.from.fossils.Rd                   |   66 
 FossilSim-2.1.0/FossilSim/man/beast.fbd.format.Rd                      |   76 
 FossilSim-2.1.0/FossilSim/man/count.fossils.Rd                         |   34 
 FossilSim-2.1.0/FossilSim/man/count.fossils.binned.Rd                  |   38 
 FossilSim-2.1.0/FossilSim/man/fossils.Rd                               |   66 
 FossilSim-2.1.0/FossilSim/man/fossils.to.BEAST.constraints.Rd          |only
 FossilSim-2.1.0/FossilSim/man/fossils.to.BEAST.start.tree.Rd           |only
 FossilSim-2.1.0/FossilSim/man/fossils.to.paleotree.record.Rd           |   66 
 FossilSim-2.1.0/FossilSim/man/fossils.to.pyrate.Rd                     |  132 -
 FossilSim-2.1.0/FossilSim/man/get.tip.descs.Rd                         |only
 FossilSim-2.1.0/FossilSim/man/paleotree.record.to.fossils.Rd           |   76 
 FossilSim-2.1.0/FossilSim/man/place.fossils.Rd                         |only
 FossilSim-2.1.0/FossilSim/man/plot.fossils.Rd                          |  225 +-
 FossilSim-2.1.0/FossilSim/man/plot.taxonomy.Rd                         |  106 
 FossilSim-2.1.0/FossilSim/man/prune.fossil.tips.Rd                     |only
 FossilSim-2.1.0/FossilSim/man/prune.fossils.Rd                         |   74 
 FossilSim-2.1.0/FossilSim/man/rangeplot.asymmetric.Rd                  |only
 FossilSim-2.1.0/FossilSim/man/reconcile.fossils.taxonomy.Rd            |   70 
 FossilSim-2.1.0/FossilSim/man/remove.stem.fossils.Rd                   |only
 FossilSim-2.1.0/FossilSim/man/remove.stem.lineages.Rd                  |only
 FossilSim-2.1.0/FossilSim/man/sampled.tree.from.combined.Rd            |   74 
 FossilSim-2.1.0/FossilSim/man/sim.anagenetic.species.Rd                |   60 
 FossilSim-2.1.0/FossilSim/man/sim.cryptic.species.Rd                   |   56 
 FossilSim-2.1.0/FossilSim/man/sim.extant.samples.Rd                    |   82 
 FossilSim-2.1.0/FossilSim/man/sim.fbd.age.Rd                           |  112 -
 FossilSim-2.1.0/FossilSim/man/sim.fbd.rateshift.taxa.Rd                |   89 
 FossilSim-2.1.0/FossilSim/man/sim.fbd.taxa.Rd                          |   90 
 FossilSim-2.1.0/FossilSim/man/sim.fossils.environment.Rd               |  200 -
 FossilSim-2.1.0/FossilSim/man/sim.fossils.intervals.Rd                 |  149 -
 FossilSim-2.1.0/FossilSim/man/sim.fossils.poisson.Rd                   |  109 
 FossilSim-2.1.0/FossilSim/man/sim.gradient.Rd                          |   70 
 FossilSim-2.1.0/FossilSim/man/sim.interval.ages.Rd                     |  120 -
 FossilSim-2.1.0/FossilSim/man/sim.taxonomy.Rd                          |   69 
 FossilSim-2.1.0/FossilSim/man/sim.tip.samples.Rd                       |   70 
 FossilSim-2.1.0/FossilSim/man/sim.trait.values.Rd                      |  149 -
 FossilSim-2.1.0/FossilSim/man/species.end.Rd                           |only
 FossilSim-2.1.0/FossilSim/man/species.start.Rd                         |only
 FossilSim-2.1.0/FossilSim/man/subsample.fossils.oldest.Rd              |only
 FossilSim-2.1.0/FossilSim/man/subsample.fossils.oldest.and.youngest.Rd |only
 FossilSim-2.1.0/FossilSim/man/subsample.fossils.uniform.Rd             |only
 FossilSim-2.1.0/FossilSim/man/subsample.fossils.youngest.Rd            |only
 FossilSim-2.1.0/FossilSim/man/summary.taxonomy.Rd                      |   46 
 FossilSim-2.1.0/FossilSim/man/taxonomy.Rd                              |   97 
 FossilSim-2.1.0/FossilSim/man/tree.max.Rd                              |   48 
 FossilSim-2.1.0/FossilSim/vignettes/SAtree.Rmd                         |  119 -
 FossilSim-2.1.0/FossilSim/vignettes/bibliography.bib                   |  140 -
 FossilSim-2.1.0/FossilSim/vignettes/fossils.Rmd                        |  940 ++++----
 FossilSim-2.1.0/FossilSim/vignettes/intro.Rmd                          |  248 +-
 FossilSim-2.1.0/FossilSim/vignettes/mee.csl                            |  362 +--
 FossilSim-2.1.0/FossilSim/vignettes/paleotree.Rmd                      |   92 
 FossilSim-2.1.0/FossilSim/vignettes/simfbd.Rmd                         |  116 -
 FossilSim-2.1.0/FossilSim/vignettes/taxonomy.Rmd                       |  344 +--
 98 files changed, 9782 insertions(+), 9680 deletions(-)

More information about FossilSim at CRAN
Permanent link

Package jetpack updated to version 0.4.1 with previous version 0.4.0 dated 2018-10-30

Title: A Friendly Package Manager
Description: Manage project dependencies from your DESCRIPTION file. Create a reproducible virtual environment with minimal additional files in your project. Provides tools to add, remove, and update dependencies as well as install existing dependencies with a single function.
Author: Andrew Kane [aut, cre]
Maintainer: Andrew Kane <andrew@chartkick.com>

Diff between jetpack versions 0.4.0 dated 2018-10-30 and 0.4.1 dated 2018-11-16

 DESCRIPTION     |   10 +--
 MD5             |   13 ++--
 NAMESPACE       |    1 
 NEWS.md         |   11 +++
 R/jetpack.R     |  164 ++++++++++++++++++++++++++++++++++++++++++--------------
 README.md       |   47 ++++++++++++++--
 man/outdated.Rd |only
 man/update.Rd   |    4 +
 8 files changed, 191 insertions(+), 59 deletions(-)

More information about jetpack at CRAN
Permanent link

Package SocialMediaMineR (with last version 0.4) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2016-12-13 0.4
2016-03-20 0.3
2016-01-15 0.2
2014-06-25 0.1

Permanent link

Built and running on Debian GNU/Linux using R, littler and blosxom. Styled with Bootstrap.