Mon, 07 Jan 2019

Package vtree updated to version 1.0.0 with previous version 0.1.4 dated 2018-11-04

Title: Display Information About Nested Subsets of a Data Frame
Description: A tool for drawing "variable trees". Variable trees display information about hierarchical subsets of a data frame defined by values of categorical variables.
Author: Nick Barrowman
Maintainer: Nick Barrowman <nbarrowman@cheo.on.ca>

Diff between vtree versions 0.1.4 dated 2018-11-04 and 1.0.0 dated 2019-01-07

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New package simcausal with initial version 0.5.5
Package: simcausal
Type: Package
Version: 0.5.5
Title: Simulating Longitudinal Data with Causal Inference Applications
Authors@R: c( person("Oleg", "Sofrygin", role=c("aut", "cre"), email="oleg.sofrygin@gmail.com"), person(c("Mark", "J."), "van der Laan", role="aut", email="laan@berkeley.edu"), person("Romain", "Neugebauer", role="aut", email="Romain.S.Neugebauer@kp.org"))
Description: A flexible tool for simulating complex longitudinal data using structural equations, with emphasis on problems in causal inference. Specify interventions and simulate from intervened data generating distributions. Define and evaluate treatment-specific means, the average treatment effects and coefficients from working marginal structural models. User interface designed to facilitate the conduct of transparent and reproducible simulation studies, and allows concise expression of complex functional dependencies for a large number of time-varying nodes. See the package vignette for more information, documentation and examples.
URL: https://github.com/osofr/simcausal
BugReports: https://github.com/osofr/simcausal/issues
Depends: R (>= 3.2.0)
Imports: data.table, igraph, stringr, R6, assertthat, Matrix, methods
Suggests: copula, RUnit, ltmle, knitr, ggplot2, Hmisc, mvtnorm, bindata
VignetteBuilder: knitr
License: GPL-2
RoxygenNote: 6.1.1
NeedsCompilation: no
Packaged: 2019-01-04 22:56:32 UTC; olegsofrygin
Author: Oleg Sofrygin [aut, cre], Mark J. van der Laan [aut], Romain Neugebauer [aut]
Maintainer: Oleg Sofrygin <oleg.sofrygin@gmail.com>
Repository: CRAN
Date/Publication: 2019-01-07 23:40:03 UTC

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Package shadow updated to version 0.6.0 with previous version 0.5.9 dated 2018-12-04

Title: Geometric Shadow Calculations
Description: Functions for calculating: (1) shadow height, (2) logical shadow flag, (3) shadow footprint, (4) Sky View Factor and (5) radiation load. Basic required inputs include a polygonal layer of obstacle outlines along with their heights (i.e. "extruded polygons"), sun azimuth and sun elevation. The package also provides functions for related preliminary calculations: breaking polygons into line segments, determining azimuth of line segments, shifting segments by azimuth and distance, constructing the footprint of a line-of-sight between an observer and the sun, and creating a 3D grid covering the surface area of extruded polygons.
Author: Michael Dorman [aut, cre], Evyatar Erell [ctb], Itai Kloog [ctb], Adi Vulkan [ctb]
Maintainer: Michael Dorman <dorman@post.bgu.ac.il>

Diff between shadow versions 0.5.9 dated 2018-12-04 and 0.6.0 dated 2019-01-07

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Package MRFA updated to version 0.4 with previous version 0.2 dated 2017-09-21

Title: Fitting and Predicting Large-Scale Nonlinear Regression Problems using Multi-Resolution Functional ANOVA (MRFA) Approach
Description: Performs the MRFA approach proposed by Sung et al. (2019+) <arXiv:1709.07064> to fit and predict nonlinear regression problems, particularly for large-scale and high-dimensional problems. The application includes deterministic or stochastic computer experiments, spatial datasets, and so on.
Author: Chih-Li Sung
Maintainer: Chih-Li Sung <iamdfchile@gmail.com>

Diff between MRFA versions 0.2 dated 2017-09-21 and 0.4 dated 2019-01-07

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Package missRanger updated to version 1.0.4 with previous version 1.0.3 dated 2018-05-15

Title: Fast Imputation of Missing Values
Description: Alternative implementation of the beautiful 'MissForest' algorithm used to impute mixed-type data sets by chaining random forests, introduced by Stekhoven, D.J. and Buehlmann, P. (2012) <doi:10.1093/bioinformatics/btr597>. Under the hood, it uses the lightning fast random jungle package 'ranger'. Between the iterative model fitting, we offer the option of using predictive mean matching. This firstly avoids imputation with values not already present in the original data (like a value 0.3334 in 0-1 coded variable). Secondly, predictive mean matching tries to raise the variance in the resulting conditional distributions to a realistic level. This would allow e.g. to do multiple imputation when repeating the call to missRanger().
Author: Michael Mayer [aut, cre, cph]
Maintainer: Michael Mayer <mayermichael79@gmail.com>

Diff between missRanger versions 1.0.3 dated 2018-05-15 and 1.0.4 dated 2019-01-07

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Package survidm updated to version 1.2.0 with previous version 1.1.0 dated 2018-03-17

Title: Inference and Prediction in an Illness-Death Model
Description: Newly developed methods for the estimation of several probabilities in an illness-death model. The package can be used to obtain nonparametric and semiparametric estimates for: transition probabilities, occupation probabilities, cumulative incidence function and the sojourn time distributions. Additionally, it is possible to fit proportional hazards regression models in each transition of the Illness-Death Model. Several auxiliary functions are also provided which can be used for marginal estimation of the survival functions.
Author: Luis Meira-Machado, Marta Sestelo and Gustavo Soutinho
Maintainer: Marta Sestelo <sestelo@uvigo.es>

Diff between survidm versions 1.1.0 dated 2018-03-17 and 1.2.0 dated 2019-01-07

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Package superml updated to version 0.2.0 with previous version 0.1.0 dated 2018-12-30

Title: Build Machine Learning Models Like Using Python's Scikit-Learn Library in R
Description: The idea is to provide a standard interface to users who use both R and Python for building machine learning models. This package provides a scikit-learn's fit, predict interface to train machine learning models in R.
Author: Manish Saraswat [aut, cre]
Maintainer: Manish Saraswat <manish06saraswat@gmail.com>

Diff between superml versions 0.1.0 dated 2018-12-30 and 0.2.0 dated 2019-01-07

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More information about superml at CRAN
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Package sport updated to version 0.1.2 with previous version 0.1.1 dated 2018-09-11

Title: Sequential Pairwise Online Rating Techniques
Description: Calculates ratings for two-player or multi-player challenges. Methods included in package such as are able to estimate ratings (players strengths) and their evolution in time, also able to predict output of challenge. Algorithms are based on Bayesian Approximation Method, and they don't involve any matrix inversions nor likelihood estimation. Parameters are updated sequentially, and computation doesn't require any additional RAM to make estimation feasible. Additionally, base of the package is written in C++ what makes sport computation even faster. Methods used in the package refers to Mark E. Glickman (1999) <http://www.glicko.net/research/glicko.pdf>; Mark E. Glickman (2001) <doi:10.1080/02664760120059219>; Ruby C. Weng, Chih-Jen Lin (2011) <http://jmlr.csail.mit.edu/papers/volume12/weng11a/weng11a.pdf>; W. Penny, Stephen J. Roberts (1999) <doi:10.1109/IJCNN.1999.832603>.
Author: Dawid Kałędkowski [aut, cre]
Maintainer: Dawid Kałędkowski <dawid.kaledkowski@gmail.com>

Diff between sport versions 0.1.1 dated 2018-09-11 and 0.1.2 dated 2019-01-07

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Package NatureSounds updated to version 1.0.1 with previous version 1.0.0 dated 2018-02-09

Title: Animal Sounds for Bioacustic Analysis
Description: Collection of example animal sounds for bioacoustic analysis.
Author: Marcelo Araya-Salas [aut, cre]
Maintainer: Marcelo Araya-Salas <marceloa27@gmail.com>

Diff between NatureSounds versions 1.0.0 dated 2018-02-09 and 1.0.1 dated 2019-01-07

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Package gpg updated to version 1.1 with previous version 1.0 dated 2019-01-04

Title: GNU Privacy Guard for R
Description: Bindings to GnuPG for working with OpenGPG (RFC4880) cryptographic methods. Includes utilities for public key encryption, creating and verifying digital signatures, and managing your local keyring. Note that some functionality depends on the version of GnuPG that is installed on the system. On Windows this package can be used together with 'GPG4Win' which provides a GUI for managing keys and entering passphrases.
Author: Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>)
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>

Diff between gpg versions 1.0 dated 2019-01-04 and 1.1 dated 2019-01-07

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More information about gpg at CRAN
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Package wrapr updated to version 1.8.2 with previous version 1.8.0 dated 2018-12-11

Title: Wrap R Tools for Debugging and Parametric Programming
Description: Tools for writing and debugging R code. Provides: 'let()' (converts non-standard evaluation interfaces to parametric standard evaluation interfaces, inspired by 'gtools:strmacro()' and 'base::bquote()'), '%.>%' dot-pipe (an 'S3' configurable pipe), 'build_frame()'/'draw_frame()' ('data.frame' example tools), 'qc()' (quoting concatenate), ':=' (named map builder), and more.
Author: John Mount [aut, cre], Nina Zumel [aut], Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>

Diff between wrapr versions 1.8.0 dated 2018-12-11 and 1.8.2 dated 2019-01-07

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Package wpp2015 updated to version 1.1-2 with previous version 1.1-0 dated 2016-06-03

Title: World Population Prospects 2015
Description: Provides data from the United Nation's World Population Prospects 2015.
Author: Population Division, Department of Economic and Social Affairs, United Nations.
Maintainer: Hana Sevcikova <hanas@uw.edu>

Diff between wpp2015 versions 1.1-0 dated 2016-06-03 and 1.1-2 dated 2019-01-07

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Package smbinning updated to version 0.8 with previous version 0.7 dated 2018-10-18

Title: Scoring Modeling and Optimal Binning
Description: A set of functions to build a scoring model from beginning to end, leading the user to follow an efficient and organized development process, reducing significantly the time spent on data exploration, variable selection, feature engineering and binning, among other recurrent tasks. The package also incorporates monotonic and customized binning, scaling capabilities that transforms logistic coefficients into points for a better business understanding and calculates and visualizes classic performance metrics of a classification model.
Author: Herman Jopia
Maintainer: Herman Jopia <hjopia@gmail.com>

Diff between smbinning versions 0.7 dated 2018-10-18 and 0.8 dated 2019-01-07

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Package sitmo updated to version 2.0.1 with previous version 2.0.0 dated 2018-07-01

Title: Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files
Description: Provided within are two high quality and fast PPRNGs that may be used in an 'OpenMP' parallel environment. In addition, there is a generator for one dimensional low-discrepancy sequence. The objective of this library to consolidate the distribution of the 'sitmo' (C++98 & C++11), 'threefry' and 'vandercorput' (C++11-only) engines on CRAN by enabling others to link to the header files inside of 'sitmo' instead of including a copy of each engine within their individual package. Lastly, the package contains example implementations using the 'sitmo' package and three accompanying vignette that provide additional information.
Author: James Balamuta [aut, cre, cph] (<https://orcid.org/0000-0003-2826-8458>), Thijs van den Berg [aut, cph], Ralf Stubner [ctb]
Maintainer: James Balamuta <balamut2@illinois.edu>

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Package naivebayes updated to version 0.9.3 with previous version 0.9.2 dated 2018-01-02

Title: High Performance Implementation of the Naive Bayes Algorithm
Description: High performance implementation of the Naive Bayes algorithm.
Author: Michal Majka
Maintainer: Michal Majka <michalmajka@hotmail.com>

Diff between naivebayes versions 0.9.2 dated 2018-01-02 and 0.9.3 dated 2019-01-07

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Package htmlTable updated to version 1.13.1 with previous version 1.13 dated 2019-01-02

Title: Advanced Tables for Markdown/HTML
Description: Tables with state-of-the-art layout elements such as row spanners, column spanners, table spanners, zebra striping, and more. While allowing advanced layout, the underlying css-structure is simple in order to maximize compatibility with word processors such as 'MS Word' or 'LibreOffice'. The package also contains a few text formatting functions that help outputting text compatible with HTML/LaTeX.
Author: Max Gordon [aut, cre], Stephen Gragg [aut], Peter Konings [aut]
Maintainer: Max Gordon <max@gforge.se>

Diff between htmlTable versions 1.13 dated 2019-01-02 and 1.13.1 dated 2019-01-07

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Package hergm updated to version 4.0-0 with previous version 3.2-1 dated 2018-06-03

Title: Hierarchical Exponential-Family Random Graph Models
Description: Hierarchical exponential-family random graph models with local dependence.
Author: Michael Schweinberger <michael.schweinberger@rice.edu> [aut, cre], Mark S. Handcock <handcock@ucla.edu> [aut], Sergii Babkin <babkin.sergii@gmail.com> [aut], Jonathan Stewart <jonathan.stewart@rice.edu> [aut], Duy Vu <duy.vu@unimelb.edu.au> [aut], Pamela Luna <pamela.luna@rice.edu> [ctb]
Maintainer: Michael Schweinberger <michael.schweinberger@rice.edu>

Diff between hergm versions 3.2-1 dated 2018-06-03 and 4.0-0 dated 2019-01-07

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Package feather updated to version 0.3.2 with previous version 0.3.1 dated 2016-11-08

Title: R Bindings to the Feather 'API'
Description: Read and write feather files, a lightweight binary columnar data store designed for maximum speed.
Author: Hadley Wickham [aut, cre], RStudio [cph], Feather developers [ctb] (Bundled feather library), Google [ctb] (Bundled flatbuffers code), LevelDB Authors [ctb]
Maintainer: Hadley Wickham <hadley@rstudio.com>

Diff between feather versions 0.3.1 dated 2016-11-08 and 0.3.2 dated 2019-01-07

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Package tbrf updated to version 0.1.1 with previous version 0.1.0 dated 2018-09-03

Title: Time-Based Rolling Functions
Description: Provides rolling statistical functions based on date and time windows instead of n-lagged observations.
Author: Michael Schramm [aut, cre] (<https://orcid.org/0000-0003-1876-6592>), Frank Harrell [ctb]
Maintainer: Michael Schramm <michael.schramm@ag.tamu.edu>

Diff between tbrf versions 0.1.0 dated 2018-09-03 and 0.1.1 dated 2019-01-07

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Package splinetree updated to version 0.1.1 with previous version 0.1.0 dated 2018-09-24

Title: Longitudinal Regression Trees and Forests
Description: Builds regression trees and random forests for longitudinal or functional data using a spline projection method. Implements and extends the work of Yu and Lambert (1999) <doi:10.1080/10618600.1999.10474847>. This method allows trees and forests to be built while considering either level and shape or only shape of response trajectories.
Author: Anna Neufeld [aut, cre], Brianna Heggeseth [aut, ths]
Maintainer: Anna Neufeld <aneufeld@uw.edu>

Diff between splinetree versions 0.1.0 dated 2018-09-24 and 0.1.1 dated 2019-01-07

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Package rdfp updated to version 0.1.3 with previous version 0.1.2 dated 2018-04-09

Title: An Implementation of the 'DoubleClick for Publishers' API
Description: An implementation of Google's 'DoubleClick for Publishers' (DFP) API <https://developers.google.com/ad-manager/api/start> (recently renamed to 'Google Ad Manager'). This package is automatically compiled from the API WSDLs (Web Service Description Language) files to dictate how the API is structured. Theoretically, all API actions are possible using this package; however, care must be taken to format the inputs correctly and parse the outputs correctly as well. Please see Google's DFP API reference and this package's website <https://stevenmmortimer.github.io/rdfp/> for more information, documentation, and examples.
Author: Steven M. Mortimer [aut, cre], Jennifer Bryan [ctb], Joanna Zhao [ctb]
Maintainer: Steven M. Mortimer <reportmort@gmail.com>

Diff between rdfp versions 0.1.2 dated 2018-04-09 and 0.1.3 dated 2019-01-07

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Package pool updated to version 0.1.4.2 with previous version 0.1.4.1 dated 2018-06-29

Title: Object Pooling
Description: Enables the creation of object pools, which make it less computationally expensive to fetch a new object. Currently the only supported pooled objects are 'DBI' connections.
Author: Joe Cheng [aut, cre], Barbara Borges [aut], RStudio [cph]
Maintainer: Joe Cheng <joe@rstudio.com>

Diff between pool versions 0.1.4.1 dated 2018-06-29 and 0.1.4.2 dated 2019-01-07

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Permanent link

Package phenocamapi updated to version 0.1.3 with previous version 0.1.2 dated 2018-11-11

Title: Interacting with the PhenoCam Data and API
Description: A bundle to facilitate working with PhenoCam timeseries and data. The user would be able to obtain phenological time-series and site metadata from the PhenoCam network <https://phenocam.sr.unh.edu/webcam/>.
Author: Bijan Seyednasrollah
Maintainer: Bijan Seyednasrollah <bijan.s.nasr@gmail.com>

Diff between phenocamapi versions 0.1.2 dated 2018-11-11 and 0.1.3 dated 2019-01-07

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Permanent link

Package cdata updated to version 1.0.4 with previous version 1.0.3 dated 2018-10-21

Title: Fluid Data Transformations
Description: Supplies higher-order fluid data transform operators that include pivot and anti-pivot as special cases. The methodology is describe in 'Zumel', 2018, "Fluid data reshaping with 'cdata'", <http://winvector.github.io/FluidData/FluidDataReshapingWithCdata.html> , doi:10.5281/zenodo.1173299 . Works on in-memory data or on remote data using 'rquery' and the 'DBI' database interface.
Author: John Mount [aut, cre], Nina Zumel [aut], Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>

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Package burnr updated to version 0.3.0 with previous version 0.2.2 dated 2018-01-02

Title: Fire-History Analysis in R
Description: Basic tools to analyze forest fire history data (e.g. FHX) in R.
Author: Steven Malevich [aut, cre], Christopher Guiterman [ctb], Ellis Margolis [ctb]
Maintainer: Steven Malevich <malevich@email.arizona.edu>

Diff between burnr versions 0.2.2 dated 2018-01-02 and 0.3.0 dated 2019-01-07

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Package agricolae updated to version 1.3-0 with previous version 1.2-8 dated 2017-09-12

Title: Statistical Procedures for Agricultural Research
Description: Original idea was presented in the thesis "A statistical analysis tool for agricultural research" to obtain the degree of Master on science, National Engineering University (UNI), Lima-Peru. Some experimental data for the examples come from the CIP and others research. Agricolae offers extensive functionality on experimental design especially for agricultural and plant breeding experiments, which can also be useful for other purposes. It supports planning of lattice, Alpha, Cyclic, Complete Block, Latin Square, Graeco-Latin Squares, augmented block, factorial, split and strip plot designs. There are also various analysis facilities for experimental data, e.g. treatment comparison procedures and several non-parametric tests comparison, biodiversity indexes and consensus cluster.
Author: Felipe de Mendiburu
Maintainer: Felipe de Mendiburu <fmendiburu@lamolina.edu.pe>

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Package sjstats updated to version 0.17.3 with previous version 0.17.2 dated 2018-11-15

Title: Collection of Convenient Functions for Common Statistical Computations
Description: Collection of convenient functions for common statistical computations, which are not directly provided by R's base or stats packages. This package aims at providing, first, shortcuts for statistical measures, which otherwise could only be calculated with additional effort (like standard errors or root mean squared errors). Second, these shortcut functions are generic (if appropriate), and can be applied not only to vectors, but also to other objects as well (e.g., the Coefficient of Variation can be computed for vectors, linear models, or linear mixed models; the r2()-function returns the r-squared value for 'lm', 'glm', 'merMod' and other model objects). The focus of most functions lies on summary statistics or fit measures for regression models, including generalized linear models, mixed effects models and Bayesian models. However, some of the functions also deal with other statistical measures, like Cronbach's Alpha, Cramer's V, Phi etc.
Author: Daniel Lüdecke [aut, cre] (<https://orcid.org/0000-0002-8895-3206>)
Maintainer: Daniel Lüdecke <d.luedecke@uke.de>

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Package simstandard updated to version 0.3.0 with previous version 0.2.0 dated 2018-11-08

Title: Generate Standardized Data
Description: Creates simulated data from structural equation models with standardized loading.
Author: W. Joel Schneider [aut, cre] (<https://orcid.org/0000-0002-8393-5316>)
Maintainer: W. Joel Schneider <w.joel.schneider@gmail.com>

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Package harmonicmeanp updated to version 1.1 with previous version 1.0 dated 2017-07-19

Title: Harmonic Mean p-Values and Model Averaging by Mean Maximum Likelihood
Description: The harmonic mean p-value (HMP) test combines p-values and corrects for multiple testing while controlling the family-wise error rate in a way that is more powerful than common alternatives including Bonferroni and Simes procedures, more stringent than controlling the false discovery rate, and is robust to positive correlations between tests and unequal weights. It is a multi-level test in the sense that a superset of one or more significant tests is almost certain to be significant and conversely when the superset is non-significant, the constituent tests are almost certain to be non-significant. It is based on MAMML (model averaging by mean maximum likelihood), a frequentist analogue to Bayesian model averaging, and is theoretically grounded in generalized central limit theorem. For detailed examples type vignette("harmonicmeanp") after installation.
Author: Daniel J. Wilson
Maintainer: Daniel Wilson <hmp.R.package@gmail.com>

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Package gclus updated to version 1.3.2 with previous version 1.3.1 dated 2012-06-25

Title: Clustering Graphics
Description: Orders panels in scatterplot matrices and parallel coordinate displays by some merit index. Package contains various indices of merit, ordering functions, and enhanced versions of pairs and parcoord which color panels according to their merit level.
Author: Catherine Hurley
Maintainer: Catherine Hurley <catherine.hurley@mu.ie>

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Package ForestGapR updated to version 0.0.2 with previous version 0.0.1 dated 2018-12-30

Title: Tropical Forest Gaps Analysis
Description: Set of tools for detecting and analyzing Airborne Laser Scanning-derived Tropical Forest Canopy Gaps.
Author: Carlos Alberto Silva [aut, cre, cph], Ekena Rangel Pinagé [ctb] (Reviews the documentation), Midhun Mohan [ctb] (Reviews the documentation), Danilo Roberti Alves de Almeida [ctb] (Reviews the documentation), Eben North Broadbent [ctb] (Reviews the documentation), Wan Shafrina Wan Mohd Jaafar [ctb] (Reviews the documentation), Daniel de Almeida Papa [ctb] (Reviews the documentation), Adrian Cardil [ctb] (Reviews the documentation), Ruben Valbuena [cph, ctb], Carine Klauberg [ctb] (Reviews the documentation)
Maintainer: Carlos Alberto Silva <carlos_engflorestal@outlook.com>

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Package effectFusion updated to version 1.1 with previous version 1.0 dated 2016-11-29

Title: Bayesian Effect Fusion for Categorical Predictors
Description: Variable selection and Bayesian effect fusion for categorical predictors in linear and logistic regression models. Effect fusion aims at the question which categories have a similar effect on the response and therefore can be fused to obtain a sparser representation of the model. Effect fusion and variable selection can be obtained either with a prior that has an interpretation as spike and slab prior on the level effect differences or with a sparse finite mixture prior on the level effects. The regression coefficients are estimated with a flat uninformative prior after model selection or by taking model averages. Posterior inference is accomplished by an MCMC sampling scheme which makes use of a data augmentation strategy (Polson, Scott & Windle (2013)) based on latent Polya-Gamma random variables in the case of logistic regression. The code for data augmentation is taken from Polson et al. (2013), who own the copyright.
Author: Daniela Pauger [aut], Magdalena Leitner [aut, cre], Helga Wagner [aut] (<https://orcid.org/0000-0002-7003-9512>), Gertraud Malsiner-Walli [aut] (<https://orcid.org/0000-0002-1213-4749>), Nicholas G. Polson [ctb], James G. Scott [ctb], Jesse Windle [ctb], Bettina Gr"un [ctb] (<https://orcid.org/0000-0001-7265-4773>)
Maintainer: Magdalena Leitner <magdalena.leitner@jku.at>

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Package DALEX updated to version 0.2.6 with previous version 0.2.5 dated 2019-01-02

Title: Descriptive mAchine Learning EXplanations
Description: Machine Learning (ML) models are widely used and have various applications in classification or regression. Models created with boosting, bagging, stacking or similar techniques are often used due to their high performance, but such black-box models usually lack of interpretability. DALEX package contains various explainers that help to understand the link between input variables and model output. The single_variable() explainer extracts conditional response of a model as a function of a single selected variable. It is a wrapper over packages 'pdp' and 'ALEPlot'. The single_prediction() explainer attributes parts of a model prediction to particular variables used in the model. It is a wrapper over 'breakDown' package. The variable_dropout() explainer calculates variable importance scores based on variable shuffling. All these explainers can be plotted with generic plot() function and compared across different models.
Author: Przemyslaw Biecek [aut, cre] (<https://orcid.org/0000-0001-8423-1823>)
Maintainer: Przemyslaw Biecek <przemyslaw.biecek@gmail.com>

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Package dabestr updated to version 0.2.0 with previous version 0.1.0 dated 2018-11-19

Title: Data Analysis using Bootstrap-Coupled Estimation
Description: Data Analysis using Bootstrap-Coupled ESTimation. Estimation statistics is a simple framework that avoids the pitfalls of significance testing. It uses familiar statistical concepts: means, mean differences, and error bars. More importantly, it focuses on the effect size of one's experiment/intervention, as opposed to a false dichotomy engendered by P values. An estimation plot has two key features: 1. It presents all datapoints as a swarmplot, which orders each point to display the underlying distribution. 2. It presents the effect size as a bootstrap 95% confidence interval on a separate but aligned axes. Estimation plots are introduced in Ho et al (2018) <doi:10.1101/377978>.
Author: Joses W. Ho [cre, aut], Tayfun Tumkaya [aut]
Maintainer: Joses W. Ho <joseshowh@gmail.com>

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Package CholWishart updated to version 0.9.4 with previous version 0.9.3 dated 2018-12-08

Title: Cholesky Decomposition of the Wishart Distribution
Description: Sampling from the Cholesky factorization of a Wishart random variable, sampling from the inverse Wishart distribution, sampling from the Cholesky factorization of an inverse Wishart random variable, sampling from the pseudo Wishart distribution, sampling from the generalized inverse Wishart distribution, computing densities for the Wishart and inverse Wishart distributions, and computing the multivariate gamma and digamma functions.
Author: Geoffrey Thompson [aut, cre], R Core Team [ctb]
Maintainer: Geoffrey Thompson <gzthompson@gmail.com>

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Package BH updated to version 1.69.0-1 with previous version 1.66.0-1 dated 2018-02-13

Title: Boost C++ Header Files
Description: Boost provides free peer-reviewed portable C++ source libraries. A large part of Boost is provided as C++ template code which is resolved entirely at compile-time without linking. This package aims to provide the most useful subset of Boost libraries for template use among CRAN package. By placing these libraries in this package, we offer a more efficient distribution system for CRAN as replication of this code in the sources of other packages is avoided. As of release 1.69.0-1, the following Boost libraries are included: 'algorithm' 'align' 'any' 'atomic' 'bimap' 'bind' 'circular_buffer' 'compute' 'concept' 'config' 'container' 'date_time' 'detail' 'dynamic_bitset' 'exception' 'filesystem' 'flyweight' 'foreach' 'functional' 'fusion' 'geometry' 'graph' 'heap' 'icl' 'integer' 'interprocess' 'intrusive' 'io' 'iostreams' 'iterator' 'math' 'move' 'mpl' 'multiprcecision' 'numeric' 'pending' 'phoenix' 'preprocessor' 'propery_tree' 'random' 'range' 'scope_exit' 'smart_ptr' 'sort' 'spirit' 'tuple' 'type_traits' 'typeof' 'unordered' 'utility' 'uuid'.
Author: Dirk Eddelbuettel, John W. Emerson and Michael J. Kane
Maintainer: Dirk Eddelbuettel <edd@debian.org>

Diff between BH versions 1.66.0-1 dated 2018-02-13 and 1.69.0-1 dated 2019-01-07

 ChangeLog                                                                                       |   35 
 DESCRIPTION                                                                                     |   12 
 MD5                                                                                             | 3968 ++++-----
 README.md                                                                                       |    4 
 build/partial.rdb                                                                               |binary
 inst/NEWS.Rd                                                                                    |   17 
 inst/include/boost/algorithm/algorithm.hpp                                                      |    8 
 inst/include/boost/algorithm/apply_permutation.hpp                                              |only
 inst/include/boost/algorithm/clamp.hpp                                                          |   22 
 inst/include/boost/algorithm/cxx11/all_of.hpp                                                   |    8 
 inst/include/boost/algorithm/cxx11/any_of.hpp                                                   |    8 
 inst/include/boost/algorithm/cxx11/copy_if.hpp                                                  |   12 
 inst/include/boost/algorithm/cxx11/copy_n.hpp                                                   |    2 
 inst/include/boost/algorithm/cxx11/find_if_not.hpp                                              |    4 
 inst/include/boost/algorithm/cxx11/iota.hpp                                                     |    6 
 inst/include/boost/algorithm/cxx11/is_partitioned.hpp                                           |    4 
 inst/include/boost/algorithm/cxx11/is_sorted.hpp                                                |   32 
 inst/include/boost/algorithm/cxx11/none_of.hpp                                                  |    8 
 inst/include/boost/algorithm/cxx11/one_of.hpp                                                   |   29 
 inst/include/boost/algorithm/cxx11/partition_copy.hpp                                           |    5 
 inst/include/boost/algorithm/cxx14/equal.hpp                                                    |   15 
 inst/include/boost/algorithm/cxx14/mismatch.hpp                                                 |    7 
 inst/include/boost/algorithm/cxx17/exclusive_scan.hpp                                           |    4 
 inst/include/boost/algorithm/cxx17/for_each_n.hpp                                               |    2 
 inst/include/boost/algorithm/cxx17/inclusive_scan.hpp                                           |    6 
 inst/include/boost/algorithm/cxx17/reduce.hpp                                                   |   12 
 inst/include/boost/algorithm/cxx17/transform_exclusive_scan.hpp                                 |    2 
 inst/include/boost/algorithm/cxx17/transform_inclusive_scan.hpp                                 |    5 
 inst/include/boost/algorithm/cxx17/transform_reduce.hpp                                         |    4 
 inst/include/boost/algorithm/find_backward.hpp                                                  |only
 inst/include/boost/algorithm/find_not.hpp                                                       |only
 inst/include/boost/algorithm/string/finder.hpp                                                  |    4 
 inst/include/boost/align/aligned_allocator.hpp                                                  |   13 
 inst/include/boost/align/aligned_allocator_adaptor.hpp                                          |   32 
 inst/include/boost/align/detail/aligned_alloc.hpp                                               |    2 
 inst/include/boost/any.hpp                                                                      |   10 
 inst/include/boost/archive/basic_binary_iarchive.hpp                                            |   26 
 inst/include/boost/archive/detail/iserializer.hpp                                               |    6 
 inst/include/boost/archive/detail/polymorphic_iarchive_route.hpp                                |only
 inst/include/boost/archive/detail/polymorphic_oarchive_route.hpp                                |only
 inst/include/boost/archive/impl/archive_serializer_map.ipp                                      |    8 
 inst/include/boost/archive/impl/basic_xml_grammar.hpp                                           |    2 
 inst/include/boost/archive/iterators/xml_unescape.hpp                                           |    8 
 inst/include/boost/archive/polymorphic_binary_iarchive.hpp                                      |only
 inst/include/boost/archive/polymorphic_binary_oarchive.hpp                                      |only
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 inst/include/boost/archive/polymorphic_text_woarchive.hpp                                       |only
 inst/include/boost/archive/polymorphic_xml_iarchive.hpp                                         |only
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 inst/include/boost/archive/polymorphic_xml_wiarchive.hpp                                        |only
 inst/include/boost/archive/polymorphic_xml_woarchive.hpp                                        |only
 inst/include/boost/archive/text_oarchive.hpp                                                    |    4 
 inst/include/boost/archive/text_woarchive.hpp                                                   |    4 
 inst/include/boost/archive/xml_oarchive.hpp                                                     |    4 
 inst/include/boost/archive/xml_woarchive.hpp                                                    |    4 
 inst/include/boost/asio.hpp                                                                     |    2 
 inst/include/boost/asio/associated_allocator.hpp                                                |    2 
 inst/include/boost/asio/associated_executor.hpp                                                 |    2 
 inst/include/boost/asio/async_result.hpp                                                        |    2 
 inst/include/boost/asio/basic_datagram_socket.hpp                                               |    2 
 inst/include/boost/asio/basic_deadline_timer.hpp                                                |    2 
 inst/include/boost/asio/basic_io_object.hpp                                                     |    2 
 inst/include/boost/asio/basic_raw_socket.hpp                                                    |    2 
 inst/include/boost/asio/basic_seq_packet_socket.hpp                                             |    2 
 inst/include/boost/asio/basic_serial_port.hpp                                                   |    2 
 inst/include/boost/asio/basic_signal_set.hpp                                                    |    2 
 inst/include/boost/asio/basic_socket.hpp                                                        |    2 
 inst/include/boost/asio/basic_socket_acceptor.hpp                                               |    6 
 inst/include/boost/asio/basic_socket_iostream.hpp                                               |   20 
 inst/include/boost/asio/basic_socket_streambuf.hpp                                              |   34 
 inst/include/boost/asio/basic_stream_socket.hpp                                                 |    2 
 inst/include/boost/asio/basic_streambuf.hpp                                                     |    2 
 inst/include/boost/asio/basic_streambuf_fwd.hpp                                                 |    2 
 inst/include/boost/asio/basic_waitable_timer.hpp                                                |    2 
 inst/include/boost/asio/bind_executor.hpp                                                       |    2 
 inst/include/boost/asio/buffer.hpp                                                              |   91 
 inst/include/boost/asio/buffered_read_stream.hpp                                                |    2 
 inst/include/boost/asio/buffered_read_stream_fwd.hpp                                            |    2 
 inst/include/boost/asio/buffered_stream.hpp                                                     |    2 
 inst/include/boost/asio/buffered_stream_fwd.hpp                                                 |    2 
 inst/include/boost/asio/buffered_write_stream.hpp                                               |    2 
 inst/include/boost/asio/buffered_write_stream_fwd.hpp                                           |    2 
 inst/include/boost/asio/buffers_iterator.hpp                                                    |    2 
 inst/include/boost/asio/completion_condition.hpp                                                |    2 
 inst/include/boost/asio/connect.hpp                                                             |   33 
 inst/include/boost/asio/coroutine.hpp                                                           |    2 
 inst/include/boost/asio/datagram_socket_service.hpp                                             |    2 
 inst/include/boost/asio/deadline_timer.hpp                                                      |    2 
 inst/include/boost/asio/deadline_timer_service.hpp                                              |    2 
 inst/include/boost/asio/defer.hpp                                                               |    2 
 inst/include/boost/asio/detail/array.hpp                                                        |    2 
 inst/include/boost/asio/detail/array_fwd.hpp                                                    |    2 
 inst/include/boost/asio/detail/assert.hpp                                                       |    2 
 inst/include/boost/asio/detail/atomic_count.hpp                                                 |    2 
 inst/include/boost/asio/detail/base_from_completion_cond.hpp                                    |    2 
 inst/include/boost/asio/detail/bind_handler.hpp                                                 |    2 
 inst/include/boost/asio/detail/buffer_resize_guard.hpp                                          |    2 
 inst/include/boost/asio/detail/buffer_sequence_adapter.hpp                                      |    2 
 inst/include/boost/asio/detail/buffered_stream_storage.hpp                                      |    2 
 inst/include/boost/asio/detail/call_stack.hpp                                                   |    2 
 inst/include/boost/asio/detail/chrono.hpp                                                       |    2 
 inst/include/boost/asio/detail/chrono_time_traits.hpp                                           |    2 
 inst/include/boost/asio/detail/completion_handler.hpp                                           |    2 
 inst/include/boost/asio/detail/concurrency_hint.hpp                                             |    2 
 inst/include/boost/asio/detail/conditionally_enabled_event.hpp                                  |    2 
 inst/include/boost/asio/detail/conditionally_enabled_mutex.hpp                                  |    2 
 inst/include/boost/asio/detail/config.hpp                                                       |  120 
 inst/include/boost/asio/detail/consuming_buffers.hpp                                            |    6 
 inst/include/boost/asio/detail/cstddef.hpp                                                      |    2 
 inst/include/boost/asio/detail/cstdint.hpp                                                      |    2 
 inst/include/boost/asio/detail/date_time_fwd.hpp                                                |    2 
 inst/include/boost/asio/detail/deadline_timer_service.hpp                                       |    2 
 inst/include/boost/asio/detail/dependent_type.hpp                                               |    2 
 inst/include/boost/asio/detail/descriptor_ops.hpp                                               |    2 
 inst/include/boost/asio/detail/descriptor_read_op.hpp                                           |    2 
 inst/include/boost/asio/detail/descriptor_write_op.hpp                                          |    2 
 inst/include/boost/asio/detail/dev_poll_reactor.hpp                                             |    2 
 inst/include/boost/asio/detail/epoll_reactor.hpp                                                |    6 
 inst/include/boost/asio/detail/event.hpp                                                        |    2 
 inst/include/boost/asio/detail/eventfd_select_interrupter.hpp                                   |    2 
 inst/include/boost/asio/detail/executor_op.hpp                                                  |    2 
 inst/include/boost/asio/detail/fd_set_adapter.hpp                                               |    2 
 inst/include/boost/asio/detail/fenced_block.hpp                                                 |    2 
 inst/include/boost/asio/detail/functional.hpp                                                   |    2 
 inst/include/boost/asio/detail/future.hpp                                                       |only
 inst/include/boost/asio/detail/gcc_arm_fenced_block.hpp                                         |    2 
 inst/include/boost/asio/detail/gcc_hppa_fenced_block.hpp                                        |    2 
 inst/include/boost/asio/detail/gcc_sync_fenced_block.hpp                                        |    2 
 inst/include/boost/asio/detail/gcc_x86_fenced_block.hpp                                         |    2 
 inst/include/boost/asio/detail/global.hpp                                                       |    2 
 inst/include/boost/asio/detail/handler_alloc_helpers.hpp                                        |    2 
 inst/include/boost/asio/detail/handler_cont_helpers.hpp                                         |    2 
 inst/include/boost/asio/detail/handler_invoke_helpers.hpp                                       |    2 
 inst/include/boost/asio/detail/handler_tracking.hpp                                             |    2 
 inst/include/boost/asio/detail/handler_type_requirements.hpp                                    |    6 
 inst/include/boost/asio/detail/handler_work.hpp                                                 |    2 
 inst/include/boost/asio/detail/hash_map.hpp                                                     |    2 
 inst/include/boost/asio/detail/impl/buffer_sequence_adapter.ipp                                 |    2 
 inst/include/boost/asio/detail/impl/descriptor_ops.ipp                                          |    2 
 inst/include/boost/asio/detail/impl/dev_poll_reactor.hpp                                        |    2 
 inst/include/boost/asio/detail/impl/dev_poll_reactor.ipp                                        |    2 
 inst/include/boost/asio/detail/impl/epoll_reactor.hpp                                           |    2 
 inst/include/boost/asio/detail/impl/epoll_reactor.ipp                                           |    2 
 inst/include/boost/asio/detail/impl/eventfd_select_interrupter.ipp                              |    2 
 inst/include/boost/asio/detail/impl/handler_tracking.ipp                                        |    2 
 inst/include/boost/asio/detail/impl/kqueue_reactor.hpp                                          |    2 
 inst/include/boost/asio/detail/impl/kqueue_reactor.ipp                                          |    2 
 inst/include/boost/asio/detail/impl/null_event.ipp                                              |    2 
 inst/include/boost/asio/detail/impl/pipe_select_interrupter.ipp                                 |    2 
 inst/include/boost/asio/detail/impl/posix_event.ipp                                             |    2 
 inst/include/boost/asio/detail/impl/posix_mutex.ipp                                             |    2 
 inst/include/boost/asio/detail/impl/posix_thread.ipp                                            |    2 
 inst/include/boost/asio/detail/impl/posix_tss_ptr.ipp                                           |    2 
 inst/include/boost/asio/detail/impl/reactive_descriptor_service.ipp                             |    2 
 inst/include/boost/asio/detail/impl/reactive_serial_port_service.ipp                            |    2 
 inst/include/boost/asio/detail/impl/reactive_socket_service_base.ipp                            |    2 
 inst/include/boost/asio/detail/impl/resolver_service_base.ipp                                   |    2 
 inst/include/boost/asio/detail/impl/scheduler.ipp                                               |    2 
 inst/include/boost/asio/detail/impl/select_reactor.hpp                                          |    2 
 inst/include/boost/asio/detail/impl/select_reactor.ipp                                          |    2 
 inst/include/boost/asio/detail/impl/service_registry.hpp                                        |    2 
 inst/include/boost/asio/detail/impl/service_registry.ipp                                        |    2 
 inst/include/boost/asio/detail/impl/signal_set_service.ipp                                      |    2 
 inst/include/boost/asio/detail/impl/socket_ops.ipp                                              |    4 
 inst/include/boost/asio/detail/impl/socket_select_interrupter.ipp                               |    2 
 inst/include/boost/asio/detail/impl/strand_executor_service.hpp                                 |    2 
 inst/include/boost/asio/detail/impl/strand_executor_service.ipp                                 |   14 
 inst/include/boost/asio/detail/impl/strand_service.hpp                                          |    2 
 inst/include/boost/asio/detail/impl/strand_service.ipp                                          |    2 
 inst/include/boost/asio/detail/impl/throw_error.ipp                                             |    2 
 inst/include/boost/asio/detail/impl/timer_queue_ptime.ipp                                       |    2 
 inst/include/boost/asio/detail/impl/timer_queue_set.ipp                                         |    2 
 inst/include/boost/asio/detail/impl/win_event.ipp                                               |    2 
 inst/include/boost/asio/detail/impl/win_iocp_handle_service.ipp                                 |    2 
 inst/include/boost/asio/detail/impl/win_iocp_io_context.hpp                                     |    2 
 inst/include/boost/asio/detail/impl/win_iocp_io_context.ipp                                     |    2 
 inst/include/boost/asio/detail/impl/win_iocp_serial_port_service.ipp                            |    2 
 inst/include/boost/asio/detail/impl/win_iocp_socket_service_base.ipp                            |    2 
 inst/include/boost/asio/detail/impl/win_mutex.ipp                                               |    2 
 inst/include/boost/asio/detail/impl/win_object_handle_service.ipp                               |    2 
 inst/include/boost/asio/detail/impl/win_static_mutex.ipp                                        |    2 
 inst/include/boost/asio/detail/impl/win_thread.ipp                                              |    2 
 inst/include/boost/asio/detail/impl/win_tss_ptr.ipp                                             |    2 
 inst/include/boost/asio/detail/impl/winrt_ssocket_service_base.ipp                              |    2 
 inst/include/boost/asio/detail/impl/winrt_timer_scheduler.hpp                                   |    2 
 inst/include/boost/asio/detail/impl/winrt_timer_scheduler.ipp                                   |    2 
 inst/include/boost/asio/detail/impl/winsock_init.ipp                                            |    2 
 inst/include/boost/asio/detail/io_control.hpp                                                   |    2 
 inst/include/boost/asio/detail/is_buffer_sequence.hpp                                           |   56 
 inst/include/boost/asio/detail/is_executor.hpp                                                  |    2 
 inst/include/boost/asio/detail/keyword_tss_ptr.hpp                                              |    2 
 inst/include/boost/asio/detail/kqueue_reactor.hpp                                               |    2 
 inst/include/boost/asio/detail/macos_fenced_block.hpp                                           |    2 
 inst/include/boost/asio/detail/memory.hpp                                                       |    2 
 inst/include/boost/asio/detail/mutex.hpp                                                        |    2 
 inst/include/boost/asio/detail/noncopyable.hpp                                                  |    2 
 inst/include/boost/asio/detail/null_event.hpp                                                   |    2 
 inst/include/boost/asio/detail/null_fenced_block.hpp                                            |    2 
 inst/include/boost/asio/detail/null_global.hpp                                                  |    2 
 inst/include/boost/asio/detail/null_mutex.hpp                                                   |    2 
 inst/include/boost/asio/detail/null_reactor.hpp                                                 |    2 
 inst/include/boost/asio/detail/null_signal_blocker.hpp                                          |    2 
 inst/include/boost/asio/detail/null_socket_service.hpp                                          |    2 
 inst/include/boost/asio/detail/null_static_mutex.hpp                                            |    2 
 inst/include/boost/asio/detail/null_thread.hpp                                                  |    2 
 inst/include/boost/asio/detail/null_tss_ptr.hpp                                                 |    2 
 inst/include/boost/asio/detail/object_pool.hpp                                                  |    2 
 inst/include/boost/asio/detail/old_win_sdk_compat.hpp                                           |    2 
 inst/include/boost/asio/detail/op_queue.hpp                                                     |    2 
 inst/include/boost/asio/detail/operation.hpp                                                    |    2 
 inst/include/boost/asio/detail/pipe_select_interrupter.hpp                                      |    2 
 inst/include/boost/asio/detail/pop_options.hpp                                                  |    2 
 inst/include/boost/asio/detail/posix_event.hpp                                                  |   11 
 inst/include/boost/asio/detail/posix_fd_set_adapter.hpp                                         |    2 
 inst/include/boost/asio/detail/posix_global.hpp                                                 |    2 
 inst/include/boost/asio/detail/posix_mutex.hpp                                                  |    2 
 inst/include/boost/asio/detail/posix_signal_blocker.hpp                                         |    2 
 inst/include/boost/asio/detail/posix_static_mutex.hpp                                           |    2 
 inst/include/boost/asio/detail/posix_thread.hpp                                                 |    2 
 inst/include/boost/asio/detail/posix_tss_ptr.hpp                                                |    2 
 inst/include/boost/asio/detail/push_options.hpp                                                 |    4 
 inst/include/boost/asio/detail/reactive_descriptor_service.hpp                                  |    2 
 inst/include/boost/asio/detail/reactive_null_buffers_op.hpp                                     |    2 
 inst/include/boost/asio/detail/reactive_serial_port_service.hpp                                 |    2 
 inst/include/boost/asio/detail/reactive_socket_accept_op.hpp                                    |    2 
 inst/include/boost/asio/detail/reactive_socket_connect_op.hpp                                   |    2 
 inst/include/boost/asio/detail/reactive_socket_recv_op.hpp                                      |    2 
 inst/include/boost/asio/detail/reactive_socket_recvfrom_op.hpp                                  |    2 
 inst/include/boost/asio/detail/reactive_socket_recvmsg_op.hpp                                   |    2 
 inst/include/boost/asio/detail/reactive_socket_send_op.hpp                                      |    2 
 inst/include/boost/asio/detail/reactive_socket_sendto_op.hpp                                    |    2 
 inst/include/boost/asio/detail/reactive_socket_service.hpp                                      |    2 
 inst/include/boost/asio/detail/reactive_socket_service_base.hpp                                 |    2 
 inst/include/boost/asio/detail/reactive_wait_op.hpp                                             |    2 
 inst/include/boost/asio/detail/reactor.hpp                                                      |    2 
 inst/include/boost/asio/detail/reactor_fwd.hpp                                                  |    2 
 inst/include/boost/asio/detail/reactor_op.hpp                                                   |    2 
 inst/include/boost/asio/detail/reactor_op_queue.hpp                                             |    2 
 inst/include/boost/asio/detail/recycling_allocator.hpp                                          |    2 
 inst/include/boost/asio/detail/regex_fwd.hpp                                                    |    2 
 inst/include/boost/asio/detail/resolve_endpoint_op.hpp                                          |    2 
 inst/include/boost/asio/detail/resolve_op.hpp                                                   |    2 
 inst/include/boost/asio/detail/resolve_query_op.hpp                                             |    2 
 inst/include/boost/asio/detail/resolver_service.hpp                                             |    2 
 inst/include/boost/asio/detail/resolver_service_base.hpp                                        |    2 
 inst/include/boost/asio/detail/scheduler.hpp                                                    |    2 
 inst/include/boost/asio/detail/scheduler_operation.hpp                                          |    2 
 inst/include/boost/asio/detail/scheduler_thread_info.hpp                                        |    2 
 inst/include/boost/asio/detail/scoped_lock.hpp                                                  |    2 
 inst/include/boost/asio/detail/scoped_ptr.hpp                                                   |    2 
 inst/include/boost/asio/detail/select_interrupter.hpp                                           |    2 
 inst/include/boost/asio/detail/select_reactor.hpp                                               |    2 
 inst/include/boost/asio/detail/service_registry.hpp                                             |    2 
 inst/include/boost/asio/detail/signal_blocker.hpp                                               |    2 
 inst/include/boost/asio/detail/signal_handler.hpp                                               |    2 
 inst/include/boost/asio/detail/signal_init.hpp                                                  |    2 
 inst/include/boost/asio/detail/signal_op.hpp                                                    |    2 
 inst/include/boost/asio/detail/signal_set_service.hpp                                           |    2 
 inst/include/boost/asio/detail/socket_holder.hpp                                                |    2 
 inst/include/boost/asio/detail/socket_ops.hpp                                                   |    2 
 inst/include/boost/asio/detail/socket_option.hpp                                                |    2 
 inst/include/boost/asio/detail/socket_select_interrupter.hpp                                    |    2 
 inst/include/boost/asio/detail/socket_types.hpp                                                 |    2 
 inst/include/boost/asio/detail/solaris_fenced_block.hpp                                         |    2 
 inst/include/boost/asio/detail/static_mutex.hpp                                                 |    2 
 inst/include/boost/asio/detail/std_event.hpp                                                    |    2 
 inst/include/boost/asio/detail/std_fenced_block.hpp                                             |    2 
 inst/include/boost/asio/detail/std_global.hpp                                                   |    2 
 inst/include/boost/asio/detail/std_mutex.hpp                                                    |    2 
 inst/include/boost/asio/detail/std_static_mutex.hpp                                             |    2 
 inst/include/boost/asio/detail/std_thread.hpp                                                   |    2 
 inst/include/boost/asio/detail/strand_executor_service.hpp                                      |    6 
 inst/include/boost/asio/detail/strand_service.hpp                                               |    2 
 inst/include/boost/asio/detail/string_view.hpp                                                  |   26 
 inst/include/boost/asio/detail/thread.hpp                                                       |    2 
 inst/include/boost/asio/detail/thread_context.hpp                                               |    2 
 inst/include/boost/asio/detail/thread_group.hpp                                                 |    2 
 inst/include/boost/asio/detail/thread_info_base.hpp                                             |   49 
 inst/include/boost/asio/detail/throw_error.hpp                                                  |    2 
 inst/include/boost/asio/detail/throw_exception.hpp                                              |    2 
 inst/include/boost/asio/detail/timer_queue.hpp                                                  |    4 
 inst/include/boost/asio/detail/timer_queue_base.hpp                                             |    2 
 inst/include/boost/asio/detail/timer_queue_ptime.hpp                                            |    2 
 inst/include/boost/asio/detail/timer_queue_set.hpp                                              |    2 
 inst/include/boost/asio/detail/timer_scheduler.hpp                                              |    2 
 inst/include/boost/asio/detail/timer_scheduler_fwd.hpp                                          |    2 
 inst/include/boost/asio/detail/tss_ptr.hpp                                                      |    2 
 inst/include/boost/asio/detail/type_traits.hpp                                                  |    8 
 inst/include/boost/asio/detail/variadic_templates.hpp                                           |    2 
 inst/include/boost/asio/detail/wait_handler.hpp                                                 |    2 
 inst/include/boost/asio/detail/wait_op.hpp                                                      |    2 
 inst/include/boost/asio/detail/win_event.hpp                                                    |    2 
 inst/include/boost/asio/detail/win_fd_set_adapter.hpp                                           |    2 
 inst/include/boost/asio/detail/win_fenced_block.hpp                                             |    2 
 inst/include/boost/asio/detail/win_global.hpp                                                   |    5 
 inst/include/boost/asio/detail/win_iocp_handle_read_op.hpp                                      |    2 
 inst/include/boost/asio/detail/win_iocp_handle_service.hpp                                      |    2 
 inst/include/boost/asio/detail/win_iocp_handle_write_op.hpp                                     |    2 
 inst/include/boost/asio/detail/win_iocp_io_context.hpp                                          |    2 
 inst/include/boost/asio/detail/win_iocp_null_buffers_op.hpp                                     |    2 
 inst/include/boost/asio/detail/win_iocp_operation.hpp                                           |    2 
 inst/include/boost/asio/detail/win_iocp_overlapped_op.hpp                                       |    2 
 inst/include/boost/asio/detail/win_iocp_overlapped_ptr.hpp                                      |    2 
 inst/include/boost/asio/detail/win_iocp_serial_port_service.hpp                                 |    2 
 inst/include/boost/asio/detail/win_iocp_socket_accept_op.hpp                                    |    2 
 inst/include/boost/asio/detail/win_iocp_socket_connect_op.hpp                                   |    2 
 inst/include/boost/asio/detail/win_iocp_socket_recv_op.hpp                                      |    2 
 inst/include/boost/asio/detail/win_iocp_socket_recvfrom_op.hpp                                  |    2 
 inst/include/boost/asio/detail/win_iocp_socket_recvmsg_op.hpp                                   |    2 
 inst/include/boost/asio/detail/win_iocp_socket_send_op.hpp                                      |    2 
 inst/include/boost/asio/detail/win_iocp_socket_service.hpp                                      |    2 
 inst/include/boost/asio/detail/win_iocp_socket_service_base.hpp                                 |    2 
 inst/include/boost/asio/detail/win_iocp_thread_info.hpp                                         |    2 
 inst/include/boost/asio/detail/win_iocp_wait_op.hpp                                             |    2 
 inst/include/boost/asio/detail/win_mutex.hpp                                                    |    2 
 inst/include/boost/asio/detail/win_object_handle_service.hpp                                    |    2 
 inst/include/boost/asio/detail/win_static_mutex.hpp                                             |    2 
 inst/include/boost/asio/detail/win_thread.hpp                                                   |    2 
 inst/include/boost/asio/detail/win_tss_ptr.hpp                                                  |    2 
 inst/include/boost/asio/detail/winapp_thread.hpp                                                |    2 
 inst/include/boost/asio/detail/wince_thread.hpp                                                 |    2 
 inst/include/boost/asio/detail/winrt_async_manager.hpp                                          |    2 
 inst/include/boost/asio/detail/winrt_async_op.hpp                                               |    2 
 inst/include/boost/asio/detail/winrt_resolve_op.hpp                                             |    2 
 inst/include/boost/asio/detail/winrt_resolver_service.hpp                                       |    2 
 inst/include/boost/asio/detail/winrt_socket_connect_op.hpp                                      |    2 
 inst/include/boost/asio/detail/winrt_socket_recv_op.hpp                                         |    2 
 inst/include/boost/asio/detail/winrt_socket_send_op.hpp                                         |    2 
 inst/include/boost/asio/detail/winrt_ssocket_service.hpp                                        |    2 
 inst/include/boost/asio/detail/winrt_ssocket_service_base.hpp                                   |    2 
 inst/include/boost/asio/detail/winrt_timer_scheduler.hpp                                        |    2 
 inst/include/boost/asio/detail/winrt_utils.hpp                                                  |    2 
 inst/include/boost/asio/detail/winsock_init.hpp                                                 |    2 
 inst/include/boost/asio/detail/work_dispatcher.hpp                                              |    2 
 inst/include/boost/asio/detail/wrapped_handler.hpp                                              |    2 
 inst/include/boost/asio/dispatch.hpp                                                            |    2 
 inst/include/boost/asio/error.hpp                                                               |    2 
 inst/include/boost/asio/execution_context.hpp                                                   |    2 
 inst/include/boost/asio/executor.hpp                                                            |    2 
 inst/include/boost/asio/executor_work_guard.hpp                                                 |    5 
 inst/include/boost/asio/generic/basic_endpoint.hpp                                              |    2 
 inst/include/boost/asio/generic/datagram_protocol.hpp                                           |    2 
 inst/include/boost/asio/generic/detail/endpoint.hpp                                             |    2 
 inst/include/boost/asio/generic/detail/impl/endpoint.ipp                                        |    2 
 inst/include/boost/asio/generic/raw_protocol.hpp                                                |    2 
 inst/include/boost/asio/generic/seq_packet_protocol.hpp                                         |    2 
 inst/include/boost/asio/generic/stream_protocol.hpp                                             |    2 
 inst/include/boost/asio/handler_alloc_hook.hpp                                                  |    2 
 inst/include/boost/asio/handler_continuation_hook.hpp                                           |    2 
 inst/include/boost/asio/handler_invoke_hook.hpp                                                 |    2 
 inst/include/boost/asio/handler_type.hpp                                                        |    2 
 inst/include/boost/asio/high_resolution_timer.hpp                                               |    2 
 inst/include/boost/asio/impl/buffered_read_stream.hpp                                           |    2 
 inst/include/boost/asio/impl/buffered_write_stream.hpp                                          |    2 
 inst/include/boost/asio/impl/connect.hpp                                                        |    2 
 inst/include/boost/asio/impl/defer.hpp                                                          |    2 
 inst/include/boost/asio/impl/dispatch.hpp                                                       |    2 
 inst/include/boost/asio/impl/error.ipp                                                          |    2 
 inst/include/boost/asio/impl/execution_context.hpp                                              |    2 
 inst/include/boost/asio/impl/execution_context.ipp                                              |    2 
 inst/include/boost/asio/impl/executor.hpp                                                       |    2 
 inst/include/boost/asio/impl/executor.ipp                                                       |    2 
 inst/include/boost/asio/impl/handler_alloc_hook.ipp                                             |    2 
 inst/include/boost/asio/impl/io_context.hpp                                                     |   34 
 inst/include/boost/asio/impl/io_context.ipp                                                     |    2 
 inst/include/boost/asio/impl/post.hpp                                                           |    2 
 inst/include/boost/asio/impl/read.hpp                                                           |   14 
 inst/include/boost/asio/impl/read_at.hpp                                                        |    2 
 inst/include/boost/asio/impl/read_until.hpp                                                     |    6 
 inst/include/boost/asio/impl/serial_port_base.hpp                                               |    2 
 inst/include/boost/asio/impl/serial_port_base.ipp                                               |    2 
 inst/include/boost/asio/impl/system_context.hpp                                                 |    2 
 inst/include/boost/asio/impl/system_context.ipp                                                 |    2 
 inst/include/boost/asio/impl/system_executor.hpp                                                |    2 
 inst/include/boost/asio/impl/thread_pool.hpp                                                    |    2 
 inst/include/boost/asio/impl/thread_pool.ipp                                                    |    2 
 inst/include/boost/asio/impl/use_future.hpp                                                     |    3 
 inst/include/boost/asio/impl/write.hpp                                                          |   14 
 inst/include/boost/asio/impl/write_at.hpp                                                       |    2 
 inst/include/boost/asio/io_context.hpp                                                          |   14 
 inst/include/boost/asio/io_context_strand.hpp                                                   |   28 
 inst/include/boost/asio/io_service.hpp                                                          |    2 
 inst/include/boost/asio/io_service_strand.hpp                                                   |    2 
 inst/include/boost/asio/ip/address.hpp                                                          |    6 
 inst/include/boost/asio/ip/address_v4.hpp                                                       |    6 
 inst/include/boost/asio/ip/address_v4_iterator.hpp                                              |    2 
 inst/include/boost/asio/ip/address_v4_range.hpp                                                 |    2 
 inst/include/boost/asio/ip/address_v6.hpp                                                       |    6 
 inst/include/boost/asio/ip/address_v6_iterator.hpp                                              |    2 
 inst/include/boost/asio/ip/address_v6_range.hpp                                                 |    2 
 inst/include/boost/asio/ip/bad_address_cast.hpp                                                 |    9 
 inst/include/boost/asio/ip/basic_endpoint.hpp                                                   |    2 
 inst/include/boost/asio/ip/basic_resolver.hpp                                                   |   12 
 inst/include/boost/asio/ip/basic_resolver_entry.hpp                                             |    2 
 inst/include/boost/asio/ip/basic_resolver_iterator.hpp                                          |    2 
 inst/include/boost/asio/ip/basic_resolver_query.hpp                                             |    2 
 inst/include/boost/asio/ip/basic_resolver_results.hpp                                           |   12 
 inst/include/boost/asio/ip/detail/endpoint.hpp                                                  |    2 
 inst/include/boost/asio/ip/detail/impl/endpoint.ipp                                             |    2 
 inst/include/boost/asio/ip/detail/socket_option.hpp                                             |    2 
 inst/include/boost/asio/ip/host_name.hpp                                                        |    2 
 inst/include/boost/asio/ip/icmp.hpp                                                             |    2 
 inst/include/boost/asio/ip/impl/address.hpp                                                     |    2 
 inst/include/boost/asio/ip/impl/address.ipp                                                     |    6 
 inst/include/boost/asio/ip/impl/address_v4.hpp                                                  |    2 
 inst/include/boost/asio/ip/impl/address_v4.ipp                                                  |    6 
 inst/include/boost/asio/ip/impl/address_v6.hpp                                                  |    2 
 inst/include/boost/asio/ip/impl/address_v6.ipp                                                  |    6 
 inst/include/boost/asio/ip/impl/basic_endpoint.hpp                                              |    2 
 inst/include/boost/asio/ip/impl/host_name.ipp                                                   |    2 
 inst/include/boost/asio/ip/multicast.hpp                                                        |    2 
 inst/include/boost/asio/ip/resolver_base.hpp                                                    |    2 
 inst/include/boost/asio/ip/resolver_query_base.hpp                                              |    2 
 inst/include/boost/asio/ip/resolver_service.hpp                                                 |    2 
 inst/include/boost/asio/ip/tcp.hpp                                                              |    2 
 inst/include/boost/asio/ip/udp.hpp                                                              |    2 
 inst/include/boost/asio/ip/unicast.hpp                                                          |    2 
 inst/include/boost/asio/ip/v6_only.hpp                                                          |    2 
 inst/include/boost/asio/is_executor.hpp                                                         |    2 
 inst/include/boost/asio/is_read_buffered.hpp                                                    |    2 
 inst/include/boost/asio/is_write_buffered.hpp                                                   |    2 
 inst/include/boost/asio/local/basic_endpoint.hpp                                                |    2 
 inst/include/boost/asio/local/connect_pair.hpp                                                  |    2 
 inst/include/boost/asio/local/datagram_protocol.hpp                                             |    2 
 inst/include/boost/asio/local/detail/endpoint.hpp                                               |    2 
 inst/include/boost/asio/local/detail/impl/endpoint.ipp                                          |    2 
 inst/include/boost/asio/local/stream_protocol.hpp                                               |    2 
 inst/include/boost/asio/packaged_task.hpp                                                       |    8 
 inst/include/boost/asio/placeholders.hpp                                                        |    2 
 inst/include/boost/asio/posix/basic_descriptor.hpp                                              |    2 
 inst/include/boost/asio/posix/basic_stream_descriptor.hpp                                       |    2 
 inst/include/boost/asio/posix/descriptor.hpp                                                    |    2 
 inst/include/boost/asio/posix/descriptor_base.hpp                                               |    2 
 inst/include/boost/asio/posix/stream_descriptor.hpp                                             |    2 
 inst/include/boost/asio/posix/stream_descriptor_service.hpp                                     |    2 
 inst/include/boost/asio/post.hpp                                                                |    2 
 inst/include/boost/asio/raw_socket_service.hpp                                                  |    2 
 inst/include/boost/asio/read.hpp                                                                |   22 
 inst/include/boost/asio/read_at.hpp                                                             |   10 
 inst/include/boost/asio/read_until.hpp                                                          |   16 
 inst/include/boost/asio/seq_packet_socket_service.hpp                                           |    2 
 inst/include/boost/asio/serial_port.hpp                                                         |    2 
 inst/include/boost/asio/serial_port_base.hpp                                                    |    2 
 inst/include/boost/asio/serial_port_service.hpp                                                 |    2 
 inst/include/boost/asio/signal_set.hpp                                                          |    2 
 inst/include/boost/asio/signal_set_service.hpp                                                  |    2 
 inst/include/boost/asio/socket_acceptor_service.hpp                                             |    2 
 inst/include/boost/asio/socket_base.hpp                                                         |    2 
 inst/include/boost/asio/steady_timer.hpp                                                        |    2 
 inst/include/boost/asio/strand.hpp                                                              |    2 
 inst/include/boost/asio/stream_socket_service.hpp                                               |    2 
 inst/include/boost/asio/streambuf.hpp                                                           |    2 
 inst/include/boost/asio/system_context.hpp                                                      |    2 
 inst/include/boost/asio/system_executor.hpp                                                     |    2 
 inst/include/boost/asio/system_timer.hpp                                                        |    2 
 inst/include/boost/asio/thread_pool.hpp                                                         |    4 
 inst/include/boost/asio/time_traits.hpp                                                         |    2 
 inst/include/boost/asio/use_future.hpp                                                          |    7 
 inst/include/boost/asio/uses_executor.hpp                                                       |    2 
 inst/include/boost/asio/version.hpp                                                             |    4 
 inst/include/boost/asio/wait_traits.hpp                                                         |    2 
 inst/include/boost/asio/waitable_timer_service.hpp                                              |    2 
 inst/include/boost/asio/windows/basic_handle.hpp                                                |    2 
 inst/include/boost/asio/windows/basic_object_handle.hpp                                         |    2 
 inst/include/boost/asio/windows/basic_random_access_handle.hpp                                  |    2 
 inst/include/boost/asio/windows/basic_stream_handle.hpp                                         |    2 
 inst/include/boost/asio/windows/object_handle.hpp                                               |    2 
 inst/include/boost/asio/windows/object_handle_service.hpp                                       |    2 
 inst/include/boost/asio/windows/overlapped_handle.hpp                                           |    2 
 inst/include/boost/asio/windows/overlapped_ptr.hpp                                              |    2 
 inst/include/boost/asio/windows/random_access_handle.hpp                                        |    2 
 inst/include/boost/asio/windows/random_access_handle_service.hpp                                |    2 
 inst/include/boost/asio/windows/stream_handle.hpp                                               |    2 
 inst/include/boost/asio/windows/stream_handle_service.hpp                                       |    2 
 inst/include/boost/asio/write.hpp                                                               |   21 
 inst/include/boost/asio/write_at.hpp                                                            |   10 
 inst/include/boost/assign/assignment_exception.hpp                                              |   13 
 inst/include/boost/assign/list_inserter.hpp                                                     |  168 
 inst/include/boost/assign/list_of.hpp                                                           |  312 
 inst/include/boost/assign/std/deque.hpp                                                         |   15 
 inst/include/boost/assign/std/list.hpp                                                          |   15 
 inst/include/boost/assign/std/queue.hpp                                                         |   19 
 inst/include/boost/assign/std/set.hpp                                                           |   23 
 inst/include/boost/assign/std/slist.hpp                                                         |   13 
 inst/include/boost/assign/std/stack.hpp                                                         |   14 
 inst/include/boost/assign/std/vector.hpp                                                        |   14 
 inst/include/boost/atomic/atomic.hpp                                                            |   10 
 inst/include/boost/atomic/capabilities.hpp                                                      |   49 
 inst/include/boost/atomic/detail/addressof.hpp                                                  |only
 inst/include/boost/atomic/detail/atomic_flag.hpp                                                |    1 
 inst/include/boost/atomic/detail/atomic_template.hpp                                            |  711 +
 inst/include/boost/atomic/detail/bitwise_cast.hpp                                               |   56 
 inst/include/boost/atomic/detail/bitwise_fp_cast.hpp                                            |only
 inst/include/boost/atomic/detail/caps_gcc_atomic.hpp                                            |    8 
 inst/include/boost/atomic/detail/caps_gcc_sync.hpp                                              |    4 
 inst/include/boost/atomic/detail/config.hpp                                                     |  112 
 inst/include/boost/atomic/detail/extra_fp_operations.hpp                                        |only
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 inst/include/boost/atomic/detail/extra_operations_fwd.hpp                                       |    2 
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 inst/include/boost/atomic/detail/extra_ops_gcc_arm.hpp                                          |  845 +
 inst/include/boost/atomic/detail/extra_ops_gcc_ppc.hpp                                          |  658 +
 inst/include/boost/atomic/detail/extra_ops_gcc_x86.hpp                                          |  486 -
 inst/include/boost/atomic/detail/extra_ops_generic.hpp                                          |  292 
 inst/include/boost/atomic/detail/extra_ops_msvc_arm.hpp                                         |    2 
 inst/include/boost/atomic/detail/extra_ops_msvc_x86.hpp                                         |  473 +
 inst/include/boost/atomic/detail/float_sizes.hpp                                                |only
 inst/include/boost/atomic/detail/fp_operations.hpp                                              |only
 inst/include/boost/atomic/detail/fp_operations_fwd.hpp                                          |only
 inst/include/boost/atomic/detail/fp_ops_emulated.hpp                                            |only
 inst/include/boost/atomic/detail/fp_ops_generic.hpp                                             |only
 inst/include/boost/atomic/detail/int_sizes.hpp                                                  |    6 
 inst/include/boost/atomic/detail/integral_extend.hpp                                            |only
 inst/include/boost/atomic/detail/ops_cas_based.hpp                                              |    2 
 inst/include/boost/atomic/detail/ops_emulated.hpp                                               |   15 
 inst/include/boost/atomic/detail/ops_extending_cas_based.hpp                                    |   15 
 inst/include/boost/atomic/detail/ops_gcc_alpha.hpp                                              |   13 
 inst/include/boost/atomic/detail/ops_gcc_arm.hpp                                                |   93 
 inst/include/boost/atomic/detail/ops_gcc_arm_common.hpp                                         |    5 
 inst/include/boost/atomic/detail/ops_gcc_atomic.hpp                                             |  109 
 inst/include/boost/atomic/detail/ops_gcc_ppc.hpp                                                |  164 
 inst/include/boost/atomic/detail/ops_gcc_ppc_common.hpp                                         |    7 
 inst/include/boost/atomic/detail/ops_gcc_sparc.hpp                                              |   13 
 inst/include/boost/atomic/detail/ops_gcc_sync.hpp                                               |  105 
 inst/include/boost/atomic/detail/ops_gcc_x86.hpp                                                |   21 
 inst/include/boost/atomic/detail/ops_gcc_x86_dcas.hpp                                           |  587 -
 inst/include/boost/atomic/detail/ops_linux_arm.hpp                                              |    9 
 inst/include/boost/atomic/detail/ops_msvc_arm.hpp                                               |   48 
 inst/include/boost/atomic/detail/ops_msvc_x86.hpp                                               |  127 
 inst/include/boost/atomic/detail/ops_windows.hpp                                                |   17 
 inst/include/boost/atomic/detail/platform.hpp                                                   |   12 
 inst/include/boost/atomic/detail/storage_type.hpp                                               |  101 
 inst/include/boost/atomic/detail/string_ops.hpp                                                 |only
 inst/include/boost/atomic/detail/type_traits/conditional.hpp                                    |    4 
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 inst/include/boost/atomic/detail/type_traits/is_integral.hpp                                    |    4 
 inst/include/boost/atomic/detail/type_traits/is_signed.hpp                                      |    4 
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 inst/include/boost/atomic/detail/type_traits/make_signed.hpp                                    |    4 
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 inst/include/boost/bind.hpp                                                                     |    2 
 inst/include/boost/bind/bind.hpp                                                                |    6 
 inst/include/boost/blank.hpp                                                                    |    8 
 inst/include/boost/chrono/detail/inlined/mac/chrono.hpp                                         |   20 
 inst/include/boost/chrono/detail/inlined/mac/process_cpu_clocks.hpp                             |   68 
 inst/include/boost/chrono/detail/inlined/mac/thread_clock.hpp                                   |    8 
 inst/include/boost/chrono/detail/inlined/posix/chrono.hpp                                       |   16 
 inst/include/boost/chrono/detail/inlined/posix/process_cpu_clocks.hpp                           |   54 
 inst/include/boost/chrono/detail/inlined/posix/thread_clock.hpp                                 |    8 
 inst/include/boost/chrono/detail/inlined/win/chrono.hpp                                         |   40 
 inst/include/boost/chrono/detail/inlined/win/process_cpu_clocks.hpp                             |   28 
 inst/include/boost/chrono/detail/inlined/win/thread_clock.hpp                                   |    8 
 inst/include/boost/chrono/detail/system.hpp                                                     |    9 
 inst/include/boost/chrono/io/time_point_io.hpp                                                  |    2 
 inst/include/boost/circular_buffer.hpp                                                          |    6 
 inst/include/boost/circular_buffer/allocators.hpp                                               |only
 inst/include/boost/circular_buffer/base.hpp                                                     |  157 
 inst/include/boost/circular_buffer/details.hpp                                                  |   61 
 inst/include/boost/circular_buffer/space_optimized.hpp                                          |   10 
 inst/include/boost/compute/algorithm/accumulate.hpp                                             |    5 
 inst/include/boost/compute/algorithm/adjacent_difference.hpp                                    |    7 
 inst/include/boost/compute/algorithm/adjacent_find.hpp                                          |    5 
 inst/include/boost/compute/algorithm/all_of.hpp                                                 |    4 
 inst/include/boost/compute/algorithm/any_of.hpp                                                 |    4 
 inst/include/boost/compute/algorithm/binary_search.hpp                                          |    4 
 inst/include/boost/compute/algorithm/copy_if.hpp                                                |    7 
 inst/include/boost/compute/algorithm/count.hpp                                                  |    4 
 inst/include/boost/compute/algorithm/count_if.hpp                                               |    4 
 inst/include/boost/compute/algorithm/equal.hpp                                                  |    7 
 inst/include/boost/compute/algorithm/equal_range.hpp                                            |    4 
 inst/include/boost/compute/algorithm/exclusive_scan.hpp                                         |    9 
 inst/include/boost/compute/algorithm/fill.hpp                                                   |    5 
 inst/include/boost/compute/algorithm/fill_n.hpp                                                 |    4 
 inst/include/boost/compute/algorithm/find.hpp                                                   |    4 
 inst/include/boost/compute/algorithm/find_end.hpp                                               |    6 
 inst/include/boost/compute/algorithm/find_if.hpp                                                |    4 
 inst/include/boost/compute/algorithm/find_if_not.hpp                                            |    4 
 inst/include/boost/compute/algorithm/for_each.hpp                                               |    5 
 inst/include/boost/compute/algorithm/for_each_n.hpp                                             |    4 
 inst/include/boost/compute/algorithm/gather.hpp                                                 |    7 
 inst/include/boost/compute/algorithm/generate.hpp                                               |    4 
 inst/include/boost/compute/algorithm/includes.hpp                                               |    6 
 inst/include/boost/compute/algorithm/inclusive_scan.hpp                                         |    7 
 inst/include/boost/compute/algorithm/inner_product.hpp                                          |    7 
 inst/include/boost/compute/algorithm/inplace_merge.hpp                                          |    4 
 inst/include/boost/compute/algorithm/iota.hpp                                                   |    4 
 inst/include/boost/compute/algorithm/is_partitioned.hpp                                         |    4 
 inst/include/boost/compute/algorithm/is_permutation.hpp                                         |    5 
 inst/include/boost/compute/algorithm/is_sorted.hpp                                              |    5 
 inst/include/boost/compute/algorithm/lexicographical_compare.hpp                                |    6 
 inst/include/boost/compute/algorithm/lower_bound.hpp                                            |    4 
 inst/include/boost/compute/algorithm/max_element.hpp                                            |    5 
 inst/include/boost/compute/algorithm/merge.hpp                                                  |    9 
 inst/include/boost/compute/algorithm/min_element.hpp                                            |    5 
 inst/include/boost/compute/algorithm/minmax_element.hpp                                         |    5 
 inst/include/boost/compute/algorithm/mismatch.hpp                                               |    7 
 inst/include/boost/compute/algorithm/next_permutation.hpp                                       |    4 
 inst/include/boost/compute/algorithm/none_of.hpp                                                |    4 
 inst/include/boost/compute/algorithm/nth_element.hpp                                            |    5 
 inst/include/boost/compute/algorithm/partial_sum.hpp                                            |    5 
 inst/include/boost/compute/algorithm/partition.hpp                                              |    4 
 inst/include/boost/compute/algorithm/partition_copy.hpp                                         |    7 
 inst/include/boost/compute/algorithm/partition_point.hpp                                        |   10 
 inst/include/boost/compute/algorithm/prev_permutation.hpp                                       |    4 
 inst/include/boost/compute/algorithm/random_shuffle.hpp                                         |   13 
 inst/include/boost/compute/algorithm/reduce.hpp                                                 |    5 
 inst/include/boost/compute/algorithm/reduce_by_key.hpp                                          |   16 
 inst/include/boost/compute/algorithm/remove.hpp                                                 |    4 
 inst/include/boost/compute/algorithm/remove_if.hpp                                              |    4 
 inst/include/boost/compute/algorithm/replace.hpp                                                |    4 
 inst/include/boost/compute/algorithm/replace_copy.hpp                                           |    6 
 inst/include/boost/compute/algorithm/reverse.hpp                                                |    4 
 inst/include/boost/compute/algorithm/reverse_copy.hpp                                           |    6 
 inst/include/boost/compute/algorithm/scatter.hpp                                                |    6 
 inst/include/boost/compute/algorithm/scatter_if.hpp                                             |   12 
 inst/include/boost/compute/algorithm/search.hpp                                                 |    6 
 inst/include/boost/compute/algorithm/search_n.hpp                                               |    5 
 inst/include/boost/compute/algorithm/set_difference.hpp                                         |    7 
 inst/include/boost/compute/algorithm/set_intersection.hpp                                       |    7 
 inst/include/boost/compute/algorithm/set_symmetric_difference.hpp                               |    7 
 inst/include/boost/compute/algorithm/set_union.hpp                                              |    7 
 inst/include/boost/compute/algorithm/sort_by_key.hpp                                            |    7 
 inst/include/boost/compute/algorithm/stable_partition.hpp                                       |    4 
 inst/include/boost/compute/algorithm/stable_sort.hpp                                            |    6 
 inst/include/boost/compute/algorithm/stable_sort_by_key.hpp                                     |    7 
 inst/include/boost/compute/algorithm/swap_ranges.hpp                                            |    6 
 inst/include/boost/compute/algorithm/transform.hpp                                              |   13 
 inst/include/boost/compute/algorithm/transform_if.hpp                                           |    5 
 inst/include/boost/compute/algorithm/transform_reduce.hpp                                       |    8 
 inst/include/boost/compute/algorithm/unique.hpp                                                 |    5 
 inst/include/boost/compute/algorithm/unique_copy.hpp                                            |    9 
 inst/include/boost/compute/algorithm/upper_bound.hpp                                            |    4 
 inst/include/boost/compute/async/future.hpp                                                     |   30 
 inst/include/boost/compute/detail/sha1.hpp                                                      |    7 
 inst/include/boost/compute/exception/program_build_failure.hpp                                  |only
 inst/include/boost/compute/interop/opengl/context.hpp                                           |    6 
 inst/include/boost/compute/iterator/buffer_iterator.hpp                                         |    8 
 inst/include/boost/compute/memory/svm_ptr.hpp                                                   |    2 
 inst/include/boost/compute/program.hpp                                                          |    3 
 inst/include/boost/compute/random/threefry_engine.hpp                                           |  195 
 inst/include/boost/compute/types/fundamental.hpp                                                |    2 
 inst/include/boost/concept/assert.hpp                                                           |    2 
 inst/include/boost/concept/detail/general.hpp                                                   |    6 
 inst/include/boost/concept/detail/has_constraints.hpp                                           |    6 
 inst/include/boost/concept/detail/msvc.hpp                                                      |    4 
 inst/include/boost/concept/usage.hpp                                                            |    2 
 inst/include/boost/concept_archetype.hpp                                                        |    5 
 inst/include/boost/concept_check.hpp                                                            |   38 
 inst/include/boost/config/auto_link.hpp                                                         |    8 
 inst/include/boost/config/compiler/borland.hpp                                                  |    8 
 inst/include/boost/config/compiler/clang.hpp                                                    |   12 
 inst/include/boost/config/compiler/codegear.hpp                                                 |    8 
 inst/include/boost/config/compiler/comeau.hpp                                                   |    2 
 inst/include/boost/config/compiler/common_edg.hpp                                               |    4 
 inst/include/boost/config/compiler/cray.hpp                                                     |  420 
 inst/include/boost/config/compiler/diab.hpp                                                     |    9 
 inst/include/boost/config/compiler/digitalmars.hpp                                              |    5 
 inst/include/boost/config/compiler/gcc.hpp                                                      |   16 
 inst/include/boost/config/compiler/gcc_xml.hpp                                                  |    3 
 inst/include/boost/config/compiler/greenhills.hpp                                               |    2 
 inst/include/boost/config/compiler/hp_acc.hpp                                                   |    2 
 inst/include/boost/config/compiler/intel.hpp                                                    |    8 
 inst/include/boost/config/compiler/kai.hpp                                                      |    2 
 inst/include/boost/config/compiler/metrowerks.hpp                                               |    5 
 inst/include/boost/config/compiler/mpw.hpp                                                      |    5 
 inst/include/boost/config/compiler/nvcc.hpp                                                     |    6 
 inst/include/boost/config/compiler/pathscale.hpp                                                |    3 
 inst/include/boost/config/compiler/sunpro_cc.hpp                                                |    3 
 inst/include/boost/config/compiler/vacpp.hpp                                                    |    5 
 inst/include/boost/config/compiler/visualc.hpp                                                  |   39 
 inst/include/boost/config/compiler/xlcpp.hpp                                                    |    4 
 inst/include/boost/config/compiler/xlcpp_zos.hpp                                                |    1 
 inst/include/boost/config/detail/select_compiler_config.hpp                                     |    3 
 inst/include/boost/config/detail/suffix.hpp                                                     |   37 
 inst/include/boost/config/header_deprecated.hpp                                                 |only
 inst/include/boost/config/helper_macros.hpp                                                     |only
 inst/include/boost/config/platform/cygwin.hpp                                                   |   11 
 inst/include/boost/config/platform/vxworks.hpp                                                  |  233 
 inst/include/boost/config/pragma_message.hpp                                                    |only
 inst/include/boost/config/stdlib/dinkumware.hpp                                                 |   12 
 inst/include/boost/config/stdlib/libcpp.hpp                                                     |   23 
 inst/include/boost/config/stdlib/libstdcpp3.hpp                                                 |   10 
 inst/include/boost/config/workaround.hpp                                                        |    2 
 inst/include/boost/container/adaptive_pool.hpp                                                  |  302 
 inst/include/boost/container/allocator.hpp                                                      |   17 
 inst/include/boost/container/allocator_traits.hpp                                               |  116 
 inst/include/boost/container/container_fwd.hpp                                                  |   35 
 inst/include/boost/container/deque.hpp                                                          |  101 
 inst/include/boost/container/detail/adaptive_node_pool.hpp                                      |   45 
 inst/include/boost/container/detail/adaptive_node_pool_impl.hpp                                 | 1282 +-
 inst/include/boost/container/detail/addressof.hpp                                               |    4 
 inst/include/boost/container/detail/advanced_insert_int.hpp                                     |   50 
 inst/include/boost/container/detail/alloc_helpers.hpp                                           |   16 
 inst/include/boost/container/detail/allocator_version_traits.hpp                                |   17 
 inst/include/boost/container/detail/compare_functors.hpp                                        |   66 
 inst/include/boost/container/detail/construct_in_place.hpp                                      |    2 
 inst/include/boost/container/detail/container_or_allocator_rebind.hpp                           |    4 
 inst/include/boost/container/detail/container_rebind.hpp                                        |    4 
 inst/include/boost/container/detail/copy_move_algo.hpp                                          |  213 
 inst/include/boost/container/detail/destroyers.hpp                                              |   16 
 inst/include/boost/container/detail/dispatch_uses_allocator.hpp                                 |  110 
 inst/include/boost/container/detail/flat_tree.hpp                                               |  667 -
 inst/include/boost/container/detail/is_container.hpp                                            |    4 
 inst/include/boost/container/detail/is_contiguous_container.hpp                                 |    4 
 inst/include/boost/container/detail/is_sorted.hpp                                               |    4 
 inst/include/boost/container/detail/iterator.hpp                                                |   46 
 inst/include/boost/container/detail/iterator_to_raw_pointer.hpp                                 |    4 
 inst/include/boost/container/detail/iterators.hpp                                               |   18 
 inst/include/boost/container/detail/math_functions.hpp                                          |   58 
 inst/include/boost/container/detail/min_max.hpp                                                 |    4 
 inst/include/boost/container/detail/mpl.hpp                                                     |   62 
 inst/include/boost/container/detail/multiallocation_chain.hpp                                   |   61 
 inst/include/boost/container/detail/mutex.hpp                                                   |    4 
 inst/include/boost/container/detail/next_capacity.hpp                                           |   76 
 inst/include/boost/container/detail/node_alloc_holder.hpp                                       |  308 
 inst/include/boost/container/detail/node_pool.hpp                                               |    8 
 inst/include/boost/container/detail/node_pool_impl.hpp                                          |    4 
 inst/include/boost/container/detail/pair.hpp                                                    |   83 
 inst/include/boost/container/detail/pool_common.hpp                                             |    4 
 inst/include/boost/container/detail/pool_common_alloc.hpp                                       |   14 
 inst/include/boost/container/detail/singleton.hpp                                               |    4 
 inst/include/boost/container/detail/std_fwd.hpp                                                 |    3 
 inst/include/boost/container/detail/thread_mutex.hpp                                            |only
 inst/include/boost/container/detail/transform_iterator.hpp                                      |    2 
 inst/include/boost/container/detail/tree.hpp                                                    |  359 
 inst/include/boost/container/detail/type_traits.hpp                                             |    6 
 inst/include/boost/container/detail/value_functors.hpp                                          |only
 inst/include/boost/container/detail/value_init.hpp                                              |    4 
 inst/include/boost/container/detail/variadic_templates_tools.hpp                                |    6 
 inst/include/boost/container/detail/version_type.hpp                                            |   16 
 inst/include/boost/container/detail/workaround.hpp                                              |   18 
 inst/include/boost/container/flat_map.hpp                                                       |  844 +
 inst/include/boost/container/flat_set.hpp                                                       |  314 
 inst/include/boost/container/list.hpp                                                           |  135 
 inst/include/boost/container/map.hpp                                                            |  416 
 inst/include/boost/container/node_allocator.hpp                                                 |   38 
 inst/include/boost/container/node_handle.hpp                                                    |   12 
 inst/include/boost/container/options.hpp                                                        |  165 
 inst/include/boost/container/pmr/flat_map.hpp                                                   |   12 
 inst/include/boost/container/pmr/flat_set.hpp                                                   |   12 
 inst/include/boost/container/pmr/map.hpp                                                        |    8 
 inst/include/boost/container/pmr/monotonic_buffer_resource.hpp                                  |    6 
 inst/include/boost/container/pmr/polymorphic_allocator.hpp                                      |    4 
 inst/include/boost/container/pmr/resource_adaptor.hpp                                           |    4 
 inst/include/boost/container/pmr/set.hpp                                                        |    8 
 inst/include/boost/container/pmr/synchronized_pool_resource.hpp                                 |    5 
 inst/include/boost/container/scoped_allocator.hpp                                               |   38 
 inst/include/boost/container/set.hpp                                                            |  346 
 inst/include/boost/container/slist.hpp                                                          |  150 
 inst/include/boost/container/small_vector.hpp                                                   |   80 
 inst/include/boost/container/stable_vector.hpp                                                  |  171 
 inst/include/boost/container/static_vector.hpp                                                  |   25 
 inst/include/boost/container/string.hpp                                                         |  381 
 inst/include/boost/container/uses_allocator.hpp                                                 |   10 
 inst/include/boost/container/vector.hpp                                                         |  742 -
 inst/include/boost/container_hash                                                               |only
 inst/include/boost/core/addressof.hpp                                                           |   84 
 inst/include/boost/core/empty_value.hpp                                                         |only
 inst/include/boost/core/explicit_operator_bool.hpp                                              |    9 
 inst/include/boost/core/lightweight_test.hpp                                                    |  235 
 inst/include/boost/core/lightweight_test_trait.hpp                                              |    4 
 inst/include/boost/core/noncopyable.hpp                                                         |   17 
 inst/include/boost/core/pointer_traits.hpp                                                      |  185 
 inst/include/boost/core/ref.hpp                                                                 |    3 
 inst/include/boost/core/swap.hpp                                                                |   11 
 inst/include/boost/core/typeinfo.hpp                                                            |   36 
 inst/include/boost/cstdint.hpp                                                                  |   23 
 inst/include/boost/date_time/adjust_functors.hpp                                                |   22 
 inst/include/boost/date_time/c_local_time_adjustor.hpp                                          |   13 
 inst/include/boost/date_time/compiler_config.hpp                                                |    5 
 inst/include/boost/date_time/date_duration.hpp                                                  |    4 
 inst/include/boost/date_time/date_formatting.hpp                                                |    2 
 inst/include/boost/date_time/date_formatting_locales.hpp                                        |   13 
 inst/include/boost/date_time/format_date_parser.hpp                                             |    9 
 inst/include/boost/date_time/gregorian/greg_facet.hpp                                           |   10 
 inst/include/boost/date_time/gregorian/greg_year.hpp                                            |    8 
 inst/include/boost/date_time/gregorian/gregorian_io.hpp                                         |  104 
 inst/include/boost/date_time/int_adapter.hpp                                                    |   41 
 inst/include/boost/date_time/local_time/custom_time_zone.hpp                                    |    1 
 inst/include/boost/date_time/period_formatter.hpp                                               |   19 
 inst/include/boost/date_time/posix_time/posix_time_duration.hpp                                 |   28 
 inst/include/boost/date_time/posix_time/posix_time_io.hpp                                       |   24 
 inst/include/boost/date_time/posix_time/time_serialize.hpp                                      |   85 
 inst/include/boost/date_time/special_values_parser.hpp                                          |   55 
 inst/include/boost/date_time/string_parse_tree.hpp                                              |   11 
 inst/include/boost/date_time/time_duration.hpp                                                  |   17 
 inst/include/boost/date_time/time_facet.hpp                                                     |   11 
 inst/include/boost/date_time/time_parsing.hpp                                                   |   20 
 inst/include/boost/date_time/time_resolution_traits.hpp                                         |   25 
 inst/include/boost/date_time/time_system_split.hpp                                              |   14 
 inst/include/boost/date_time/tz_db_base.hpp                                                     |    4 
 inst/include/boost/detail/allocator_utilities.hpp                                               |   18 
 inst/include/boost/detail/basic_pointerbuf.hpp                                                  |    2 
 inst/include/boost/detail/compressed_pair.hpp                                                   |   25 
 inst/include/boost/detail/indirect_traits.hpp                                                   |   85 
 inst/include/boost/detail/interlocked.hpp                                                       |   91 
 inst/include/boost/detail/is_incrementable.hpp                                                  |    4 
 inst/include/boost/detail/is_xxx.hpp                                                            |    6 
 inst/include/boost/detail/lcast_precision.hpp                                                   |   10 
 inst/include/boost/detail/lightweight_test_report.hpp                                           |    2 
 inst/include/boost/detail/lightweight_thread.hpp                                                |   79 
 inst/include/boost/detail/reference_content.hpp                                                 |   14 
 inst/include/boost/detail/utf8_codecvt_facet.hpp                                                |    2 
 inst/include/boost/detail/utf8_codecvt_facet.ipp                                                |    3 
 inst/include/boost/dynamic_bitset/detail                                                        |only
 inst/include/boost/dynamic_bitset/dynamic_bitset.hpp                                            |  166 
 inst/include/boost/endian/arithmetic.hpp                                                        |   26 
 inst/include/boost/endian/buffers.hpp                                                           |   66 
 inst/include/boost/endian/conversion.hpp                                                        |   65 
 inst/include/boost/endian/detail/cover_operators.hpp                                            |   24 
 inst/include/boost/endian/detail/intrinsic.hpp                                                  |    2 
 inst/include/boost/exception/exception.hpp                                                      |  120 
 inst/include/boost/filesystem/operations.hpp                                                    |   35 
 inst/include/boost/flyweight/detail/flyweight_core.hpp                                          |   12 
 inst/include/boost/flyweight/detail/not_placeholder_expr.hpp                                    |   13 
 inst/include/boost/flyweight/key_value.hpp                                                      |    6 
 inst/include/boost/function.hpp                                                                 |    2 
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 inst/include/boost/functional/factory.hpp                                                       |   51 
 inst/include/boost/functional/forward_adapter.hpp                                               |    2 
 inst/include/boost/functional/hash.hpp                                                          |    3 
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 inst/include/boost/functional/hash/hash.hpp                                                     |  593 -
 inst/include/boost/functional/hash/hash_fwd.hpp                                                 |   32 
 inst/include/boost/functional/hash_fwd.hpp                                                      |    7 
 inst/include/boost/functional/lightweight_forward_adapter.hpp                                   |    2 
 inst/include/boost/fusion/adapted/adt/adapt_adt.hpp                                             |    4 
 inst/include/boost/fusion/adapted/adt/adapt_assoc_adt.hpp                                       |    3 
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 inst/include/boost/fusion/adapted/struct/adapt_assoc_struct.hpp                                 |    4 
 inst/include/boost/fusion/adapted/struct/adapt_struct.hpp                                       |    4 
 inst/include/boost/fusion/adapted/struct/detail/adapt_base.hpp                                  |    2 
 inst/include/boost/fusion/algorithm/iteration/detail/for_each.hpp                               |   16 
 inst/include/boost/fusion/algorithm/iteration/detail/segmented_for_each.hpp                     |    6 
 inst/include/boost/fusion/algorithm/iteration/for_each.hpp                                      |   19 
 inst/include/boost/fusion/algorithm/iteration/for_each_fwd.hpp                                  |   19 
 inst/include/boost/fusion/algorithm/query/detail/find_if.hpp                                    |   29 
 inst/include/boost/fusion/algorithm/transformation/remove_if.hpp                                |    4 
 inst/include/boost/fusion/container/deque/detail/cpp03/as_deque.hpp                             |    8 
 inst/include/boost/fusion/container/deque/detail/keyed_element.hpp                              |   12 
 inst/include/boost/fusion/container/list/cons.hpp                                               |    4 
 inst/include/boost/fusion/container/map/detail/cpp03/as_map.hpp                                 |    8 
 inst/include/boost/fusion/container/map/detail/map_impl.hpp                                     |    6 
 inst/include/boost/fusion/container/map/detail/value_at_key_impl.hpp                            |   15 
 inst/include/boost/fusion/container/map/map.hpp                                                 |   15 
 inst/include/boost/fusion/container/map/map_fwd.hpp                                             |    2 
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 inst/include/boost/fusion/support/category_of.hpp                                               |    6 
 inst/include/boost/fusion/support/config.hpp                                                    |   33 
 inst/include/boost/fusion/support/detail/and.hpp                                                |    8 
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 inst/include/boost/fusion/support/detail/is_same_size.hpp                                       |   13 
 inst/include/boost/fusion/support/is_sequence.hpp                                               |   10 
 inst/include/boost/fusion/support/is_view.hpp                                                   |   14 
 inst/include/boost/fusion/support/unused.hpp                                                    |   34 
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 inst/include/boost/geometry/algorithms/area.hpp                                                 |  115 
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 inst/include/boost/geometry/algorithms/detail/assign_values.hpp                                 |   11 
 inst/include/boost/geometry/algorithms/detail/azimuth.hpp                                       |   12 
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 inst/include/boost/geometry/algorithms/detail/buffer/buffer_policies.hpp                        |    4 
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 inst/include/boost/geometry/algorithms/detail/buffer/get_piece_turns.hpp                        |    3 
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 inst/include/boost/geometry/algorithms/detail/expand/point.hpp                                  |  145 
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 inst/include/boost/geometry/algorithms/detail/is_valid/has_spikes.hpp                           |    9 
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 inst/include/boost/geometry/algorithms/point_on_surface.hpp                                     |    6 
 inst/include/boost/geometry/algorithms/remove_spikes.hpp                                        |   25 
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 inst/include/boost/geometry/core/radius.hpp                                                     |    8 
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 inst/include/boost/geometry/formulas/thomas_direct.hpp                                          |   45 
 inst/include/boost/geometry/formulas/thomas_inverse.hpp                                         |    8 
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 inst/include/boost/geometry/geometries/concepts/segment_concept.hpp                             |    4 
 inst/include/boost/geometry/geometries/polygon.hpp                                              |    6 
 inst/include/boost/geometry/geometry.hpp                                                        |   10 
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 inst/include/boost/geometry/index/detail/varray.hpp                                             |   18 
 inst/include/boost/geometry/index/inserter.hpp                                                  |    9 
 inst/include/boost/geometry/index/predicates.hpp                                                |   58 
 inst/include/boost/geometry/index/rtree.hpp                                                     |    7 
 inst/include/boost/geometry/io/dsv/write.hpp                                                    |    7 
 inst/include/boost/geometry/io/wkt/read.hpp                                                     |   34 
 inst/include/boost/geometry/iterators/base.hpp                                                  |    1 
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 inst/include/boost/geometry/iterators/concatenate_iterator.hpp                                  |    1 
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 inst/include/boost/geometry/iterators/flatten_iterator.hpp                                      |    1 
 inst/include/boost/geometry/policies/relate/intersection_points.hpp                             |   37 
 inst/include/boost/geometry/srs                                                                 |only
 inst/include/boost/geometry/strategies/agnostic/point_in_box_by_side.hpp                        |    3 
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 inst/include/boost/geometry/strategies/geographic/intersection.hpp                              |   81 
 inst/include/boost/geometry/strategies/geographic/intersection_elliptic.hpp                     |    2 
 inst/include/boost/geometry/strategies/geographic/parameters.hpp                                |    8 
 inst/include/boost/geometry/strategies/geographic/side.hpp                                      |   12 
 inst/include/boost/geometry/strategies/spherical/area.hpp                                       |  118 
 inst/include/boost/geometry/strategies/spherical/azimuth.hpp                                    |   71 
 inst/include/boost/geometry/strategies/spherical/densify.hpp                                    |only
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 inst/include/boost/geometry/strategies/spherical/point_in_poly_winding.hpp                      |    7 
 inst/include/boost/geometry/strategies/strategies.hpp                                           |   17 
 inst/include/boost/geometry/strategies/tags.hpp                                                 |    6 
 inst/include/boost/geometry/strategies/transform/matrix_transformers.hpp                        |    6 
 inst/include/boost/geometry/strategies/transform/srs_transformer.hpp                            |only
 inst/include/boost/geometry/util/is_inverse_spheroidal_coordinates.hpp                          |only
 inst/include/boost/geometry/util/math.hpp                                                       |  117 
 inst/include/boost/geometry/util/normalize_spheroidal_coordinates.hpp                           |   36 
 inst/include/boost/geometry/util/range.hpp                                                      |    7 
 inst/include/boost/geometry/util/select_sequence_element.hpp                                    |only
 inst/include/boost/geometry/util/series_expansion.hpp                                           |only
 inst/include/boost/geometry/views/detail/boundary_view/implementation.hpp                       |    1 
 inst/include/boost/geometry/views/detail/points_view.hpp                                        |    1 
 inst/include/boost/get_pointer.hpp                                                              |    6 
 inst/include/boost/graph/astar_search.hpp                                                       |    7 
 inst/include/boost/graph/detail/adjacency_list.hpp                                              |    4 
 inst/include/boost/graph/detail/array_binary_tree.hpp                                           |    1 
 inst/include/boost/graph/detail/compressed_sparse_row_struct.hpp                                |    4 
 inst/include/boost/graph/detail/geodesic.hpp                                                    |   12 
 inst/include/boost/graph/named_function_params.hpp                                              |    3 
 inst/include/boost/graph/stanford_graph.hpp                                                     |    8 
 inst/include/boost/graph/transitive_closure.hpp                                                 |    3 
 inst/include/boost/heap/binomial_heap.hpp                                                       |   41 
 inst/include/boost/heap/d_ary_heap.hpp                                                          |   12 
 inst/include/boost/heap/detail/heap_comparison.hpp                                              |    5 
 inst/include/boost/heap/detail/heap_node.hpp                                                    |   29 
 inst/include/boost/heap/detail/mutable_heap.hpp                                                 |    8 
 inst/include/boost/heap/detail/ordered_adaptor_iterator.hpp                                     |    4 
 inst/include/boost/heap/detail/stable_heap.hpp                                                  |   10 
 inst/include/boost/heap/detail/tree_iterator.hpp                                                |   11 
 inst/include/boost/heap/fibonacci_heap.hpp                                                      |   41 
 inst/include/boost/heap/heap_merge.hpp                                                          |    9 
 inst/include/boost/heap/pairing_heap.hpp                                                        |   49 
 inst/include/boost/heap/policies.hpp                                                            |   32 
 inst/include/boost/heap/priority_queue.hpp                                                      |   10 
 inst/include/boost/heap/skew_heap.hpp                                                           |   82 
 inst/include/boost/icl/concept/element_associator.hpp                                           |  168 
 inst/include/boost/icl/concept/interval.hpp                                                     |  353 
 inst/include/boost/icl/concept/interval_associator.hpp                                          |   25 
 inst/include/boost/icl/interval_base_map.hpp                                                    |    1 
 inst/include/boost/icl/interval_base_set.hpp                                                    |  140 
 inst/include/boost/icl/iterator.hpp                                                             |   10 
 inst/include/boost/icl/map.hpp                                                                  |  141 
 inst/include/boost/icl/type_traits/rep_type_of.hpp                                              |   17 
 inst/include/boost/icl/type_traits/value_size.hpp                                               |   10 
 inst/include/boost/integer/common_factor_rt.hpp                                                 |    8 
 inst/include/boost/interprocess/allocators/adaptive_pool.hpp                                    |    2 
 inst/include/boost/interprocess/allocators/allocator.hpp                                        |    2 
 inst/include/boost/interprocess/allocators/detail/adaptive_node_pool.hpp                        |    7 
 inst/include/boost/interprocess/allocators/detail/allocator_common.hpp                          |    4 
 inst/include/boost/interprocess/allocators/detail/node_pool.hpp                                 |    4 
 inst/include/boost/interprocess/allocators/node_allocator.hpp                                   |    2 
 inst/include/boost/interprocess/allocators/private_adaptive_pool.hpp                            |    2 
 inst/include/boost/interprocess/allocators/private_node_allocator.hpp                           |    2 
 inst/include/boost/interprocess/containers/pair.hpp                                             |    2 
 inst/include/boost/interprocess/containers/version_type.hpp                                     |    4 
 inst/include/boost/interprocess/detail/atomic.hpp                                               |   54 
 inst/include/boost/interprocess/detail/config_begin.hpp                                         |    2 
 inst/include/boost/interprocess/detail/config_external_begin.hpp                                |    2 
 inst/include/boost/interprocess/detail/file_wrapper.hpp                                         |    7 
 inst/include/boost/interprocess/detail/in_place_interface.hpp                                   |    2 
 inst/include/boost/interprocess/detail/intermodule_singleton_common.hpp                         |    2 
 inst/include/boost/interprocess/detail/managed_open_or_create_impl.hpp                          |    4 
 inst/include/boost/interprocess/detail/named_proxy.hpp                                          |    2 
 inst/include/boost/interprocess/detail/os_thread_functions.hpp                                  |   15 
 inst/include/boost/interprocess/detail/segment_manager_helper.hpp                               |   10 
 inst/include/boost/interprocess/detail/transform_iterator.hpp                                   |  164 
 inst/include/boost/interprocess/detail/variadic_templates_tools.hpp                             |    8 
 inst/include/boost/interprocess/detail/win32_api.hpp                                            |   54 
 inst/include/boost/interprocess/detail/workaround.hpp                                           |   17 
 inst/include/boost/interprocess/errors.hpp                                                      |   17 
 inst/include/boost/interprocess/exceptions.hpp                                                  |    8 
 inst/include/boost/interprocess/ipc/message_queue.hpp                                           |   16 
 inst/include/boost/interprocess/mem_algo/detail/mem_algo_common.hpp                             |    4 
 inst/include/boost/interprocess/mem_algo/detail/simple_seq_fit_impl.hpp                         |   10 
 inst/include/boost/interprocess/mem_algo/rbtree_best_fit.hpp                                    |   10 
 inst/include/boost/interprocess/offset_ptr.hpp                                                  |    2 
 inst/include/boost/interprocess/segment_manager.hpp                                             |    8 
 inst/include/boost/interprocess/smart_ptr/detail/bad_weak_ptr.hpp                               |    2 
 inst/include/boost/interprocess/smart_ptr/intrusive_ptr.hpp                                     |  102 
 inst/include/boost/interprocess/sync/detail/common_algorithms.hpp                               |   43 
 inst/include/boost/interprocess/sync/shm/named_condition_any.hpp                                |   15 
 inst/include/boost/interprocess/sync/windows/named_mutex.hpp                                    |    2 
 inst/include/boost/intrusive/avltree_algorithms.hpp                                             |   88 
 inst/include/boost/intrusive/bstree_algorithms.hpp                                              |   78 
 inst/include/boost/intrusive/circular_list_algorithms.hpp                                       |   30 
 inst/include/boost/intrusive/circular_slist_algorithms.hpp                                      |   14 
 inst/include/boost/intrusive/derivation_value_traits.hpp                                        |    2 
 inst/include/boost/intrusive/detail/any_node_and_algorithms.hpp                                 |   28 
 inst/include/boost/intrusive/detail/avltree_node.hpp                                            |   18 
 inst/include/boost/intrusive/detail/common_slist_algorithms.hpp                                 |   14 
 inst/include/boost/intrusive/detail/config_begin.hpp                                            |   27 
 inst/include/boost/intrusive/detail/list_iterator.hpp                                           |    2 
 inst/include/boost/intrusive/detail/list_node.hpp                                               |    4 
 inst/include/boost/intrusive/detail/node_cloner_disposer.hpp                                    |    4 
 inst/include/boost/intrusive/detail/rbtree_node.hpp                                             |   12 
 inst/include/boost/intrusive/detail/simple_disposers.hpp                                        |    2 
 inst/include/boost/intrusive/detail/slist_iterator.hpp                                          |    2 
 inst/include/boost/intrusive/detail/slist_node.hpp                                              |    2 
 inst/include/boost/intrusive/detail/tree_iterator.hpp                                           |    2 
 inst/include/boost/intrusive/detail/tree_node.hpp                                               |    6 
 inst/include/boost/intrusive/detail/tree_value_compare.hpp                                      |   47 
 inst/include/boost/intrusive/hashtable.hpp                                                      |  117 
 inst/include/boost/intrusive/linear_slist_algorithms.hpp                                        |    8 
 inst/include/boost/intrusive/pointer_plus_bits.hpp                                              |   18 
 inst/include/boost/intrusive/rbtree_algorithms.hpp                                              |   78 
 inst/include/boost/intrusive/sgtree_algorithms.hpp                                              |  122 
 inst/include/boost/intrusive/slist.hpp                                                          |    8 
 inst/include/boost/intrusive/splaytree_algorithms.hpp                                           |  132 
 inst/include/boost/intrusive/treap_algorithms.hpp                                               |  108 
 inst/include/boost/intrusive/unordered_set.hpp                                                  |    8 
 inst/include/boost/intrusive/unordered_set_hook.hpp                                             |    6 
 inst/include/boost/iostreams/chain.hpp                                                          |   12 
 inst/include/boost/iostreams/detail/adapter/direct_adapter.hpp                                  |    1 
 inst/include/boost/iostreams/detail/adapter/non_blocking_adapter.hpp                            |    2 
 inst/include/boost/iostreams/detail/buffer.hpp                                                  |   30 
 inst/include/boost/iostreams/detail/config/codecvt.hpp                                          |    2 
 inst/include/boost/iostreams/detail/config/fpos.hpp                                             |   11 
 inst/include/boost/iostreams/detail/config/wide_streams.hpp                                     |    3 
 inst/include/boost/iostreams/detail/restrict_impl.hpp                                           |    2 
 inst/include/boost/iostreams/detail/streambuf/direct_streambuf.hpp                              |    4 
 inst/include/boost/iostreams/detail/streambuf/indirect_streambuf.hpp                            |    4 
 inst/include/boost/iostreams/detail/streambuf/linked_streambuf.hpp                              |    4 
 inst/include/boost/iostreams/filter/bzip2.hpp                                                   |   19 
 inst/include/boost/iostreams/filter/lzma.hpp                                                    |    8 
 inst/include/boost/iostreams/filter/zlib.hpp                                                    |    8 
 inst/include/boost/iostreams/filter/zstd.hpp                                                    |only
 inst/include/boost/iostreams/filtering_stream.hpp                                               |   21 
 inst/include/boost/iostreams/stream.hpp                                                         |   20 
 inst/include/boost/iterator/advance.hpp                                                         |    2 
 inst/include/boost/iterator/distance.hpp                                                        |    2 
 inst/include/boost/iterator/iterator_archetypes.hpp                                             |   17 
 inst/include/boost/lambda/algorithm.hpp                                                         |    3 
 inst/include/boost/lambda/core.hpp                                                              |    8 
 inst/include/boost/lexical_cast.hpp                                                             |    2 
 inst/include/boost/lexical_cast/bad_lexical_cast.hpp                                            |    2 
 inst/include/boost/lexical_cast/detail/converter_lexical.hpp                                    |   46 
 inst/include/boost/lexical_cast/detail/converter_lexical_streams.hpp                            |    8 
 inst/include/boost/lexical_cast/detail/converter_numeric.hpp                                    |   26 
 inst/include/boost/lexical_cast/detail/inf_nan.hpp                                              |    2 
 inst/include/boost/lexical_cast/detail/is_character.hpp                                         |    9 
 inst/include/boost/lexical_cast/detail/lcast_char_constants.hpp                                 |    2 
 inst/include/boost/lexical_cast/detail/lcast_unsigned_converters.hpp                            |   10 
 inst/include/boost/lexical_cast/detail/widest_char.hpp                                          |    7 
 inst/include/boost/lexical_cast/try_lexical_convert.hpp                                         |   42 
 inst/include/boost/locale/definitions.hpp                                                       |   16 
 inst/include/boost/log/detail/config.hpp                                                        |   34 
 inst/include/boost/log/detail/header.hpp                                                        |    8 
 inst/include/boost/logic/tribool.hpp                                                            |   15 
 inst/include/boost/math/common_factor.hpp                                                       |    5 
 inst/include/boost/math/common_factor_ct.hpp                                                    |    5 
 inst/include/boost/math/common_factor_rt.hpp                                                    |    5 
 inst/include/boost/math/concepts/std_real_concept.hpp                                           |   13 
 inst/include/boost/math/constants/calculate_constants.hpp                                       |   19 
 inst/include/boost/math/constants/constants.hpp                                                 |    8 
 inst/include/boost/math/cstdfloat/cstdfloat_cmath.hpp                                           |    4 
 inst/include/boost/math/distributions/extreme_value.hpp                                         |    4 
 inst/include/boost/math/interpolators/barycentric_rational.hpp                                  |    8 
 inst/include/boost/math/interpolators/detail/barycentric_rational_detail.hpp                    |   39 
 inst/include/boost/math/quadrature/detail/exp_sinh_detail.hpp                                   |  114 
 inst/include/boost/math/quadrature/detail/sinh_sinh_detail.hpp                                  |   61 
 inst/include/boost/math/quadrature/detail/tanh_sinh_detail.hpp                                  |   44 
 inst/include/boost/math/quadrature/exp_sinh.hpp                                                 |   22 
 inst/include/boost/math/quadrature/gauss.hpp                                                    |   59 
 inst/include/boost/math/quadrature/gauss_kronrod.hpp                                            |   61 
 inst/include/boost/math/quadrature/naive_monte_carlo.hpp                                        |only
 inst/include/boost/math/quadrature/sinh_sinh.hpp                                                |    2 
 inst/include/boost/math/quadrature/tanh_sinh.hpp                                                |   71 
 inst/include/boost/math/quadrature/trapezoidal.hpp                                              |   41 
 inst/include/boost/math/quaternion.hpp                                                          |    1 
 inst/include/boost/math/special_functions.hpp                                                   |    1 
 inst/include/boost/math/special_functions/chebyshev_transform.hpp                               |   10 
 inst/include/boost/math/special_functions/detail/bernoulli_details.hpp                          |    9 
 inst/include/boost/math/special_functions/detail/fp_traits.hpp                                  |   27 
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 inst/include/boost/math/special_functions/ellint_d.hpp                                          |    5 
 inst/include/boost/math/special_functions/ellint_rd.hpp                                         |    5 
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 inst/include/boost/math/special_functions/next.hpp                                              |    4 
 inst/include/boost/math/special_functions/prime.hpp                                             |   25 
 inst/include/boost/math/special_functions/relative_difference.hpp                               |    2 
 inst/include/boost/math/special_functions/sinc.hpp                                              |   26 
 inst/include/boost/math/special_functions/trunc.hpp                                             |    2 
 inst/include/boost/math/tools/complex.hpp                                                       |only
 inst/include/boost/math/tools/config.hpp                                                        |   15 
 inst/include/boost/math/tools/fraction.hpp                                                      |   51 
 inst/include/boost/math/tools/numerical_differentiation.hpp                                     |only
 inst/include/boost/math/tools/polynomial.hpp                                                    |   36 
 inst/include/boost/math/tools/polynomial_gcd.hpp                                                |   48 
 inst/include/boost/math/tools/precision.hpp                                                     |    2 
 inst/include/boost/math/tools/roots.hpp                                                         |   15 
 inst/include/boost/math/tools/series.hpp                                                        |    2 
 inst/include/boost/math/tools/test_value.hpp                                                    |only
 inst/include/boost/math/tools/toms748_solve.hpp                                                 |    8 
 inst/include/boost/math_fwd.hpp                                                                 |   55 
 inst/include/boost/memory_order.hpp                                                             |   49 
 inst/include/boost/move/adl_move_swap.hpp                                                       |    6 
 inst/include/boost/move/algo/adaptive_merge.hpp                                                 |  276 
 inst/include/boost/move/algo/adaptive_sort.hpp                                                  |  561 +
 inst/include/boost/move/algo/detail/adaptive_sort_merge.hpp                                     | 1210 --
 inst/include/boost/move/algo/detail/heap_sort.hpp                                               |only
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 inst/include/boost/move/algo/detail/merge.hpp                                                   |  126 
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 inst/include/boost/move/algo/detail/set_difference.hpp                                          |only
 inst/include/boost/move/algo/move.hpp                                                           |    2 
 inst/include/boost/move/algorithm.hpp                                                           |    2 
 inst/include/boost/move/core.hpp                                                                |   16 
 inst/include/boost/move/detail/meta_utils.hpp                                                   |    2 
 inst/include/boost/move/detail/std_ns_begin.hpp                                                 |    3 
 inst/include/boost/move/detail/type_traits.hpp                                                  |    9 
 inst/include/boost/mpi/cartesian_communicator.hpp                                               |only
 inst/include/boost/mpi/collectives/all_gather.hpp                                               |  133 
 inst/include/boost/mpi/collectives/all_reduce.hpp                                               |    4 
 inst/include/boost/mpi/collectives/all_to_all.hpp                                               |    6 
 inst/include/boost/mpi/collectives/broadcast.hpp                                                |   27 
 inst/include/boost/mpi/collectives/gather.hpp                                                   |  170 
 inst/include/boost/mpi/collectives/gatherv.hpp                                                  |   37 
 inst/include/boost/mpi/collectives/reduce.hpp                                                   |    4 
 inst/include/boost/mpi/collectives/scan.hpp                                                     |    2 
 inst/include/boost/mpi/collectives/scatter.hpp                                                  |  212 
 inst/include/boost/mpi/collectives/scatterv.hpp                                                 |  203 
 inst/include/boost/mpi/communicator.hpp                                                         |  478 -
 inst/include/boost/mpi/detail/antiques.hpp                                                      |   31 
 inst/include/boost/mpi/detail/binary_buffer_oprimitive.hpp                                      |    7 
 inst/include/boost/mpi/detail/mpi_datatype_primitive.hpp                                        |    7 
 inst/include/boost/mpi/detail/offsets.hpp                                                       |only
 inst/include/boost/mpi/detail/packed_iprimitive.hpp                                             |    2 
 inst/include/boost/mpi/detail/packed_oprimitive.hpp                                             |   11 
 inst/include/boost/mpi/environment.hpp                                                          |    6 
 inst/include/boost/mpi/error_string.hpp                                                         |only
 inst/include/boost/mpi/exception.hpp                                                            |    3 
 inst/include/boost/mpi/nonblocking.hpp                                                          |   24 
 inst/include/boost/mpi/operations.hpp                                                           |   40 
 inst/include/boost/mpi/python/serialize.hpp                                                     |    4 
 inst/include/boost/mpi/request.hpp                                                              |    9 
 inst/include/boost/mpl/assert.hpp                                                               |   48 
 inst/include/boost/mpl/print.hpp                                                                |   18 
 inst/include/boost/multi_array.hpp                                                              |  186 
 inst/include/boost/multi_array/allocators.hpp                                                   |only
 inst/include/boost/multi_index/detail/auto_space.hpp                                            |   31 
 inst/include/boost/multi_index/detail/copy_map.hpp                                              |   29 
 inst/include/boost/multi_index/detail/hash_index_node.hpp                                       |   35 
 inst/include/boost/multi_index/detail/ignore_wstrict_aliasing.hpp                               |    2 
 inst/include/boost/multi_index/detail/index_base.hpp                                            |   10 
 inst/include/boost/multi_index/detail/ord_index_impl.hpp                                        |   19 
 inst/include/boost/multi_index/detail/ord_index_node.hpp                                        |   39 
 inst/include/boost/multi_index/detail/rnd_index_node.hpp                                        |   26 
 inst/include/boost/multi_index/detail/rnd_index_ptr_array.hpp                                   |   12 
 inst/include/boost/multi_index/detail/seq_index_node.hpp                                        |   18 
 inst/include/boost/multi_index/hashed_index.hpp                                                 |   22 
 inst/include/boost/multi_index/random_access_index.hpp                                          |   19 
 inst/include/boost/multi_index/sequenced_index.hpp                                              |   19 
 inst/include/boost/multi_index_container.hpp                                                    |   89 
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 inst/include/boost/multiprecision/cpp_bin_float.hpp                                             |  102 
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 inst/include/boost/multiprecision/cpp_bin_float/transcendental.hpp                              |    3 
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 inst/include/boost/multiprecision/cpp_dec_float.hpp                                             |    2 
 inst/include/boost/multiprecision/cpp_int.hpp                                                   |   54 
 inst/include/boost/multiprecision/cpp_int/add.hpp                                               |    8 
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 inst/include/boost/multiprecision/cpp_int/misc.hpp                                              |   73 
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 inst/include/boost/multiprecision/debug_adaptor.hpp                                             |  106 
 inst/include/boost/multiprecision/detail/bitscan.hpp                                            |    7 
 inst/include/boost/multiprecision/detail/default_ops.hpp                                        |  777 +
 inst/include/boost/multiprecision/detail/functions/constants.hpp                                |   63 
 inst/include/boost/multiprecision/detail/functions/pow.hpp                                      |   31 
 inst/include/boost/multiprecision/detail/generic_interconvert.hpp                               |   60 
 inst/include/boost/multiprecision/detail/no_et_ops.hpp                                          |   92 
 inst/include/boost/multiprecision/detail/number_base.hpp                                        |  568 +
 inst/include/boost/multiprecision/detail/number_compare.hpp                                     |   52 
 inst/include/boost/multiprecision/detail/precision.hpp                                          |only
 inst/include/boost/multiprecision/detail/rebind.hpp                                             |    4 
 inst/include/boost/multiprecision/eigen.hpp                                                     |only
 inst/include/boost/multiprecision/float128.hpp                                                  |   94 
 inst/include/boost/multiprecision/gmp.hpp                                                       |   84 
 inst/include/boost/multiprecision/logged_adaptor.hpp                                            |  158 
 inst/include/boost/multiprecision/mpc.hpp                                                       |only
 inst/include/boost/multiprecision/mpfi.hpp                                                      |   65 
 inst/include/boost/multiprecision/mpfr.hpp                                                      |  185 
 inst/include/boost/multiprecision/number.hpp                                                    |  433 
 inst/include/boost/multiprecision/rational_adaptor.hpp                                          |    8 
 inst/include/boost/multiprecision/tommath.hpp                                                   |    2 
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 inst/include/boost/numeric/conversion/cast.hpp                                                  |    2 
 inst/include/boost/numeric/conversion/conversion_traits.hpp                                     |    7 
 inst/include/boost/numeric/conversion/detail/converter.hpp                                      |    2 
 inst/include/boost/numeric/conversion/detail/old_numeric_cast.hpp                               |   37 
 inst/include/boost/numeric/odeint/integrate/check_adapter.hpp                                   |    2 
 inst/include/boost/optional/detail/old_optional_implementation.hpp                              |   25 
 inst/include/boost/optional/detail/optional_reference_spec.hpp                                  |   51 
 inst/include/boost/optional/detail/optional_trivially_copyable_base.hpp                         |    6 
 inst/include/boost/optional/optional.hpp                                                        |  322 
 inst/include/boost/pending/integer_log2.hpp                                                     |    6 
 inst/include/boost/pending/relaxed_heap.hpp                                                     |    1 
 inst/include/boost/phoenix/core/actor.hpp                                                       |  123 
 inst/include/boost/phoenix/core/detail/cpp03/expression.hpp                                     |    4 
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 inst/include/boost/phoenix/core/detail/cpp03/preprocessed/expression_40.hpp                     |  160 
 inst/include/boost/phoenix/core/detail/cpp03/preprocessed/expression_50.hpp                     |  200 
 inst/include/boost/phoenix/core/domain.hpp                                                      |   18 
 inst/include/boost/phoenix/core/expression.hpp                                                  |   23 
 inst/include/boost/phoenix/core/terminal.hpp                                                    |    7 
 inst/include/boost/phoenix/function/lazy_list.hpp                                               |   18 
 inst/include/boost/phoenix/operator/detail/cpp03/mem_fun_ptr_eval_result_of.hpp                 |   26 
 inst/include/boost/phoenix/operator/detail/cpp03/preprocessed/mem_fun_ptr_eval_result_of_10.hpp |only
 inst/include/boost/phoenix/operator/detail/cpp03/preprocessed/mem_fun_ptr_eval_result_of_20.hpp |only
 inst/include/boost/phoenix/operator/detail/cpp03/preprocessed/mem_fun_ptr_eval_result_of_30.hpp |only
 inst/include/boost/phoenix/operator/detail/cpp03/preprocessed/mem_fun_ptr_eval_result_of_40.hpp |only
 inst/include/boost/phoenix/operator/detail/cpp03/preprocessed/mem_fun_ptr_eval_result_of_50.hpp |only
 inst/include/boost/polygon/detail/iterator_geometry_to_set.hpp                                  |    2 
 inst/include/boost/polygon/isotropy.hpp                                                         |   83 
 inst/include/boost/polygon/polygon_traits.hpp                                                   |   18 
 inst/include/boost/pool/detail/mutex.hpp                                                        |  144 
 inst/include/boost/predef/architecture.h                                                        |    1 
 inst/include/boost/predef/architecture/arm.h                                                    |    5 
 inst/include/boost/predef/architecture/ptx.h                                                    |only
 inst/include/boost/predef/compiler.h                                                            |    1 
 inst/include/boost/predef/compiler/compaq.h                                                     |    2 
 inst/include/boost/predef/compiler/nvcc.h                                                       |only
 inst/include/boost/predef/detail/endian_compat.h                                                |    4 
 inst/include/boost/predef/language.h                                                            |    1 
 inst/include/boost/predef/language/cuda.h                                                       |only
 inst/include/boost/predef/make.h                                                                |    4 
 inst/include/boost/predef/os/cygwin.h                                                           |    7 
 inst/include/boost/predef/other/endian.h                                                        |    3 
 inst/include/boost/predef/version.h                                                             |    2 
 inst/include/boost/preprocessor/config/config.hpp                                               |   23 
 inst/include/boost/preprocessor/stringize.hpp                                                   |    4 
 inst/include/boost/preprocessor/wstringize.hpp                                                  |    4 
 inst/include/boost/program_options/detail/cmdline.hpp                                           |    2 
 inst/include/boost/program_options/detail/parsers.hpp                                           |   20 
 inst/include/boost/program_options/errors.hpp                                                   |    5 
 inst/include/boost/program_options/options_description.hpp                                      |   28 
 inst/include/boost/program_options/parsers.hpp                                                  |    4 
 inst/include/boost/property_map/property_map.hpp                                                |    1 
 inst/include/boost/ptr_container/detail/ptr_container_disable_deprecated.hpp                    |only
 inst/include/boost/ptr_container/detail/reversible_ptr_container.hpp                            |  385 
 inst/include/boost/ptr_container/ptr_sequence_adapter.hpp                                       |  322 
 inst/include/boost/ptr_container/ptr_vector.hpp                                                 |   34 
 inst/include/boost/python/detail/config.hpp                                                     |   11 
 inst/include/boost/python/numpy/config.hpp                                                      |   11 
 inst/include/boost/python/other.hpp                                                             |    8 
 inst/include/boost/python/ptr.hpp                                                               |    8 
 inst/include/boost/qvm/assert.hpp                                                               |   18 
 inst/include/boost/qvm/deduce_mat.hpp                                                           |  180 
 inst/include/boost/qvm/deduce_scalar.hpp                                                        |  262 
 inst/include/boost/qvm/deduce_vec.hpp                                                           |  170 
 inst/include/boost/qvm/detail/cofactor_impl.hpp                                                 |  128 
 inst/include/boost/qvm/detail/determinant_impl.hpp                                              |  158 
 inst/include/boost/qvm/detail/mat_assign.hpp                                                    |  150 
 inst/include/boost/qvm/detail/remove_const.hpp                                                  |   70 
 inst/include/boost/qvm/detail/transp_impl.hpp                                                   |  256 
 inst/include/boost/qvm/enable_if.hpp                                                            |   48 
 inst/include/boost/qvm/error.hpp                                                                |   80 
 inst/include/boost/qvm/gen/mat_assign2.hpp                                                      |  250 
 inst/include/boost/qvm/gen/mat_assign3.hpp                                                      |  264 
 inst/include/boost/qvm/gen/mat_assign4.hpp                                                      |  282 
 inst/include/boost/qvm/gen/mat_operations2.hpp                                                  | 3440 +++----
 inst/include/boost/qvm/gen/mat_operations3.hpp                                                  | 3830 ++++----
 inst/include/boost/qvm/gen/mat_operations4.hpp                                                  | 4258 ++++-----
 inst/include/boost/qvm/inline.hpp                                                               |   68 
 inst/include/boost/qvm/mat.hpp                                                                  |  196 
 inst/include/boost/qvm/mat_access.hpp                                                           |  516 -
 inst/include/boost/qvm/mat_operations.hpp                                                       | 4406 +++++-----
 inst/include/boost/qvm/mat_operations2.hpp                                                      |   12 
 inst/include/boost/qvm/mat_operations3.hpp                                                      |   12 
 inst/include/boost/qvm/mat_operations4.hpp                                                      |   12 
 inst/include/boost/qvm/mat_traits.hpp                                                           |   66 
 inst/include/boost/qvm/mat_traits_array.hpp                                                     |  236 
 inst/include/boost/qvm/math.hpp                                                                 |  174 
 inst/include/boost/qvm/quat_traits.hpp                                                          |   98 
 inst/include/boost/qvm/scalar_traits.hpp                                                        |  184 
 inst/include/boost/qvm/static_assert.hpp                                                        |   18 
 inst/include/boost/qvm/throw_exception.hpp                                                      |   18 
 inst/include/boost/qvm/vec_traits.hpp                                                           |   64 
 inst/include/boost/random/binomial_distribution.hpp                                             |   54 
 inst/include/boost/random/detail/disable_warnings.hpp                                           |    2 
 inst/include/boost/random/detail/gray_coded_qrng.hpp                                            |only
 inst/include/boost/random/detail/niederreiter_base2_table.hpp                                   |only
 inst/include/boost/random/detail/qrng_base.hpp                                                  |only
 inst/include/boost/random/detail/sobol_table.hpp                                                |only
 inst/include/boost/random/detail/vector_io.hpp                                                  |    3 
 inst/include/boost/random/discrete_distribution.hpp                                             |    4 
 inst/include/boost/random/faure.hpp                                                             |only
 inst/include/boost/random/hyperexponential_distribution.hpp                                     |   11 
 inst/include/boost/random/independent_bits.hpp                                                  |   12 
 inst/include/boost/random/linear_congruential.hpp                                               |    6 
 inst/include/boost/random/niederreiter_base2.hpp                                                |only
 inst/include/boost/random/poisson_distribution.hpp                                              |   34 
 inst/include/boost/random/seed_seq.hpp                                                          |    2 
 inst/include/boost/random/sobol.hpp                                                             |only
 inst/include/boost/random/uniform_on_sphere.hpp                                                 |    8 
 inst/include/boost/range/adaptor/adjacent_filtered.hpp                                          |    2 
 inst/include/boost/range/adaptor/ref_unwrapped.hpp                                              |only
 inst/include/boost/range/adaptor/replaced.hpp                                                   |   26 
 inst/include/boost/range/adaptor/replaced_if.hpp                                                |   28 
 inst/include/boost/range/adaptor/sliced.hpp                                                     |    1 
 inst/include/boost/range/algorithm/max_element.hpp                                              |   18 
 inst/include/boost/range/algorithm/min_element.hpp                                              |   18 
 inst/include/boost/range/algorithm/random_shuffle.hpp                                           |   81 
 inst/include/boost/range/algorithm_ext/insert.hpp                                               |    1 
 inst/include/boost/range/as_literal.hpp                                                         |   43 
 inst/include/boost/range/begin.hpp                                                              |   18 
 inst/include/boost/range/concepts.hpp                                                           |    2 
 inst/include/boost/range/detail/begin.hpp                                                       |    8 
 inst/include/boost/range/detail/common.hpp                                                      |    4 
 inst/include/boost/range/detail/default_constructible_unary_fn.hpp                              |   17 
 inst/include/boost/range/detail/end.hpp                                                         |    8 
 inst/include/boost/range/detail/implementation_help.hpp                                         |    4 
 inst/include/boost/range/detail/join_iterator.hpp                                               |    8 
 inst/include/boost/range/detail/microsoft.hpp                                                   |    1 
 inst/include/boost/range/detail/range_return.hpp                                                |    1 
 inst/include/boost/range/distance.hpp                                                           |   16 
 inst/include/boost/range/end.hpp                                                                |   20 
 inst/include/boost/range/has_range_iterator.hpp                                                 |    6 
 inst/include/boost/range/irange.hpp                                                             |   11 
 inst/include/boost/range/iterator_range_core.hpp                                                |    1 
 inst/include/boost/ratio/config.hpp                                                             |    8 
 inst/include/boost/rational.hpp                                                                 |   92 
 inst/include/boost/regex/config.hpp                                                             |   12 
 inst/include/boost/regex/icu.hpp                                                                |   39 
 inst/include/boost/regex/v4/basic_regex.hpp                                                     |    8 
 inst/include/boost/regex/v4/basic_regex_creator.hpp                                             |    4 
 inst/include/boost/regex/v4/basic_regex_parser.hpp                                              |    7 
 inst/include/boost/regex/v4/fileiter.hpp                                                        |    3 
 inst/include/boost/regex/v4/instances.hpp                                                       |   44 
 inst/include/boost/regex/v4/match_flags.hpp                                                     |    3 
 inst/include/boost/regex/v4/match_results.hpp                                                   |   15 
 inst/include/boost/regex/v4/perl_matcher.hpp                                                    |    9 
 inst/include/boost/regex/v4/perl_matcher_common.hpp                                             |   10 
 inst/include/boost/regex/v4/perl_matcher_non_recursive.hpp                                      |    8 
 inst/include/boost/regex/v4/regex_format.hpp                                                    |    5 
 inst/include/boost/regex/v4/regex_iterator.hpp                                                  |    8 
 inst/include/boost/regex/v4/regex_raw_buffer.hpp                                                |    6 
 inst/include/boost/regex/v4/regex_split.hpp                                                     |    4 
 inst/include/boost/regex/v4/regex_token_iterator.hpp                                            |    8 
 inst/include/boost/regex/v4/regex_traits_defaults.hpp                                           |   23 
 inst/include/boost/regex/v4/regex_workaround.hpp                                                |   11 
 inst/include/boost/regex/v4/u32regex_iterator.hpp                                               |   10 
 inst/include/boost/regex/v4/u32regex_token_iterator.hpp                                         |   12 
 inst/include/boost/regex/v4/w32_regex_traits.hpp                                                |    2 
 inst/include/boost/scope_exit.hpp                                                               |   31 
 inst/include/boost/serialization/set.hpp                                                        |    3 
 inst/include/boost/serialization/singleton.hpp                                                  |  142 
 inst/include/boost/serialization/void_cast.hpp                                                  |    9 
 inst/include/boost/signals2/detail/lwm_win32_cs.hpp                                             |   60 
 inst/include/boost/smart_ptr/allocate_local_shared_array.hpp                                    |    2 
 inst/include/boost/smart_ptr/allocate_shared_array.hpp                                          |  185 
 inst/include/boost/smart_ptr/atomic_shared_ptr.hpp                                              |   72 
 inst/include/boost/smart_ptr/bad_weak_ptr.hpp                                                   |    2 
 inst/include/boost/smart_ptr/detail/local_counted_base.hpp                                      |    6 
 inst/include/boost/smart_ptr/detail/lwm_win32_cs.hpp                                            |   16 
 inst/include/boost/smart_ptr/detail/shared_count.hpp                                            |    8 
 inst/include/boost/smart_ptr/detail/sp_counted_base_acc_ia64.hpp                                |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_aix.hpp                                     |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_clang.hpp                                   |   11 
 inst/include/boost/smart_ptr/detail/sp_counted_base_cw_ppc.hpp                                  |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_cw_x86.hpp                                  |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_gcc_ia64.hpp                                |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_gcc_mips.hpp                                |    9 
 inst/include/boost/smart_ptr/detail/sp_counted_base_gcc_ppc.hpp                                 |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_gcc_sparc.hpp                               |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_gcc_x86.hpp                                 |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_nt.hpp                                      |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_pt.hpp                                      |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_snc_ps3.hpp                                 |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_solaris.hpp                                 |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_spin.hpp                                    |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_std_atomic.hpp                              |    7 
 inst/include/boost/smart_ptr/detail/sp_counted_base_sync.hpp                                    |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_vacpp_ppc.hpp                               |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_base_w32.hpp                                     |    3 
 inst/include/boost/smart_ptr/detail/sp_counted_impl.hpp                                         |    6 
 inst/include/boost/smart_ptr/detail/sp_interlocked.hpp                                          |   10 
 inst/include/boost/smart_ptr/detail/yield_k.hpp                                                 |   22 
 inst/include/boost/smart_ptr/local_shared_ptr.hpp                                               |    4 
 inst/include/boost/smart_ptr/scoped_ptr.hpp                                                     |    2 
 inst/include/boost/smart_ptr/shared_ptr.hpp                                                     |   18 
 inst/include/boost/sort/block_indirect_sort                                                     |only
 inst/include/boost/sort/common                                                                  |only
 inst/include/boost/sort/flat_stable_sort                                                        |only
 inst/include/boost/sort/heap_sort                                                               |only
 inst/include/boost/sort/insert_sort                                                             |only
 inst/include/boost/sort/parallel_stable_sort                                                    |only
 inst/include/boost/sort/pdqsort                                                                 |only
 inst/include/boost/sort/sample_sort                                                             |only
 inst/include/boost/sort/sort.hpp                                                                |   43 
 inst/include/boost/sort/spinsort                                                                |only
 inst/include/boost/sort/spreadsort/detail/constants.hpp                                         |   92 
 inst/include/boost/sort/spreadsort/detail/float_sort.hpp                                        | 1662 +--
 inst/include/boost/sort/spreadsort/detail/integer_sort.hpp                                      |  988 +-
 inst/include/boost/sort/spreadsort/detail/spreadsort_common.hpp                                 |  249 
 inst/include/boost/sort/spreadsort/detail/string_sort.hpp                                       | 1638 +--
 inst/include/boost/sort/spreadsort/float_sort.hpp                                               |  310 
 inst/include/boost/sort/spreadsort/integer_sort.hpp                                             |  500 -
 inst/include/boost/sort/spreadsort/spreadsort.hpp                                               |  315 
 inst/include/boost/sort/spreadsort/string_sort.hpp                                              | 1190 +-
 inst/include/boost/spirit/home/classic/core/composite/actions.hpp                               |    3 
 inst/include/boost/spirit/home/classic/core/composite/epsilon.hpp                               |    9 
 inst/include/boost/spirit/home/classic/core/composite/no_actions.hpp                            |    8 
 inst/include/boost/spirit/home/classic/core/match.hpp                                           |   14 
 inst/include/boost/spirit/home/classic/core/non_terminal/impl/grammar.ipp                       |    2 
 inst/include/boost/spirit/home/classic/core/primitives/impl/primitives.ipp                      |    6 
 inst/include/boost/spirit/home/classic/core/primitives/primitives.hpp                           |   19 
 inst/include/boost/spirit/home/classic/core/scanner/impl/skipper.ipp                            |   16 
 inst/include/boost/spirit/home/classic/debug/impl/parser_names.ipp                              |   10 
 inst/include/boost/spirit/home/classic/dynamic/for.hpp                                          |    4 
 inst/include/boost/spirit/home/classic/dynamic/impl/switch.ipp                                  |    7 
 inst/include/boost/spirit/home/classic/dynamic/while.hpp                                        |    2 
 inst/include/boost/spirit/home/classic/error_handling/exceptions.hpp                            |    2 
 inst/include/boost/spirit/home/classic/iterator/impl/file_iterator.ipp                          |    6 
 inst/include/boost/spirit/home/classic/iterator/multi_pass.hpp                                  |   24 
 inst/include/boost/spirit/home/classic/meta/impl/refactoring.ipp                                |    2 
 inst/include/boost/spirit/home/classic/phoenix/actor.hpp                                        |    3 
 inst/include/boost/spirit/home/classic/phoenix/composite.hpp                                    |   12 
 inst/include/boost/spirit/home/classic/phoenix/special_ops.hpp                                  |    1 
 inst/include/boost/spirit/home/classic/phoenix/tuples.hpp                                       |    2 
 inst/include/boost/spirit/home/classic/tree/ast.hpp                                             |   12 
 inst/include/boost/spirit/home/classic/tree/parse_tree.hpp                                      |   12 
 inst/include/boost/spirit/home/classic/utility.hpp                                              |    2 
 inst/include/boost/spirit/home/classic/utility/impl/escape_char.ipp                             |    2 
 inst/include/boost/spirit/home/classic/utility/loops.hpp                                        |    2 
 inst/include/boost/spirit/home/classic/version.hpp                                              |    2 
 inst/include/boost/spirit/home/karma/auxiliary/attr_cast.hpp                                    |    2 
 inst/include/boost/spirit/home/karma/char/char.hpp                                              |    2 
 inst/include/boost/spirit/home/karma/detail/alternative_function.hpp                            |    2 
 inst/include/boost/spirit/home/karma/detail/attributes.hpp                                      |    8 
 inst/include/boost/spirit/home/karma/detail/extract_from.hpp                                    |   45 
 inst/include/boost/spirit/home/karma/detail/output_iterator.hpp                                 |    4 
 inst/include/boost/spirit/home/karma/numeric/detail/numeric_utils.hpp                           |   15 
 inst/include/boost/spirit/home/karma/numeric/detail/real_utils.hpp                              |    8 
 inst/include/boost/spirit/home/karma/stream/ostream_iterator.hpp                                |    6 
 inst/include/boost/spirit/home/lex/lexer/lexertl/generate_static.hpp                            |   10 
 inst/include/boost/spirit/home/lex/lexer/lexertl/token.hpp                                      |    7 
 inst/include/boost/spirit/home/qi/detail/alternative_function.hpp                               |    3 
 inst/include/boost/spirit/home/qi/detail/attributes.hpp                                         |   10 
 inst/include/boost/spirit/home/qi/detail/expectation_failure.hpp                                |    3 
 inst/include/boost/spirit/home/qi/detail/permute_function.hpp                                   |   16 
 inst/include/boost/spirit/home/qi/numeric/detail/numeric_utils.hpp                              |   37 
 inst/include/boost/spirit/home/qi/numeric/detail/real_impl.hpp                                  |   14 
 inst/include/boost/spirit/home/qi/numeric/numeric_utils.hpp                                     |    3 
 inst/include/boost/spirit/home/qi/operator/permutation.hpp                                      |    6 
 inst/include/boost/spirit/home/qi/operator/sequential_or.hpp                                    |    9 
 inst/include/boost/spirit/home/qi/parse.hpp                                                     |   46 
 inst/include/boost/spirit/home/qi/skip_over.hpp                                                 |    2 
 inst/include/boost/spirit/home/qi/stream/detail/iterator_source.hpp                             |   55 
 inst/include/boost/spirit/home/qi/stream/stream.hpp                                             |    5 
 inst/include/boost/spirit/home/qi/string/detail/tst.hpp                                         |    2 
 inst/include/boost/spirit/home/qi/string/tst_map.hpp                                            |    1 
 inst/include/boost/spirit/home/support/adapt_adt_attributes.hpp                                 |   15 
 inst/include/boost/spirit/home/support/algorithm/any_if_ns.hpp                                  |    5 
 inst/include/boost/spirit/home/support/algorithm/any_if_ns_so.hpp                               |only
 inst/include/boost/spirit/home/support/algorithm/any_ns_so.hpp                                  |only
 inst/include/boost/spirit/home/support/attributes.hpp                                           |   27 
 inst/include/boost/spirit/home/support/detail/endian/endian.hpp                                 |   14 
 inst/include/boost/spirit/home/support/detail/hold_any.hpp                                      |   37 
 inst/include/boost/spirit/home/support/detail/lexer/runtime_error.hpp                           |    3 
 inst/include/boost/spirit/home/support/detail/sign.hpp                                          |   39 
 inst/include/boost/spirit/home/support/iterators/detail/buf_id_check_policy.hpp                 |    2 
 inst/include/boost/spirit/home/support/iterators/detail/multi_pass.hpp                          |    1 
 inst/include/boost/spirit/home/support/iterators/line_pos_iterator.hpp                          |   34 
 inst/include/boost/spirit/home/support/utf8.hpp                                                 |   38 
 inst/include/boost/spirit/home/support/utree/detail/utree_detail2.hpp                           |    2 
 inst/include/boost/spirit/home/support/utree/utree.hpp                                          |    2 
 inst/include/boost/spirit/home/x3/binary/binary.hpp                                             |    4 
 inst/include/boost/spirit/home/x3/char/char_set.hpp                                             |    2 
 inst/include/boost/spirit/home/x3/core/action.hpp                                               |    4 
 inst/include/boost/spirit/home/x3/core/call.hpp                                                 |    4 
 inst/include/boost/spirit/home/x3/core/detail/parse_into_container.hpp                          |   24 
 inst/include/boost/spirit/home/x3/core/parse.hpp                                                |   24 
 inst/include/boost/spirit/home/x3/core/parser.hpp                                               |   10 
 inst/include/boost/spirit/home/x3/core/skip_over.hpp                                            |    2 
 inst/include/boost/spirit/home/x3/directive/confix.hpp                                          |    2 
 inst/include/boost/spirit/home/x3/directive/expect.hpp                                          |    7 
 inst/include/boost/spirit/home/x3/directive/lexeme.hpp                                          |    4 
 inst/include/boost/spirit/home/x3/directive/no_case.hpp                                         |    4 
 inst/include/boost/spirit/home/x3/directive/no_skip.hpp                                         |    4 
 inst/include/boost/spirit/home/x3/directive/omit.hpp                                            |    4 
 inst/include/boost/spirit/home/x3/directive/repeat.hpp                                          |    7 
 inst/include/boost/spirit/home/x3/directive/skip.hpp                                            |    4 
 inst/include/boost/spirit/home/x3/directive/with.hpp                                            |   43 
 inst/include/boost/spirit/home/x3/nonterminal/rule.hpp                                          |   16 
 inst/include/boost/spirit/home/x3/numeric/bool.hpp                                              |    4 
 inst/include/boost/spirit/home/x3/numeric/bool_policies.hpp                                     |    4 
 inst/include/boost/spirit/home/x3/numeric/real.hpp                                              |    4 
 inst/include/boost/spirit/home/x3/numeric/real_policies.hpp                                     |    6 
 inst/include/boost/spirit/home/x3/operator/alternative.hpp                                      |    4 
 inst/include/boost/spirit/home/x3/operator/and_predicate.hpp                                    |    4 
 inst/include/boost/spirit/home/x3/operator/detail/alternative.hpp                               |    4 
 inst/include/boost/spirit/home/x3/operator/detail/sequence.hpp                                  |  106 
 inst/include/boost/spirit/home/x3/operator/difference.hpp                                       |    4 
 inst/include/boost/spirit/home/x3/operator/kleene.hpp                                           |    4 
 inst/include/boost/spirit/home/x3/operator/list.hpp                                             |   13 
 inst/include/boost/spirit/home/x3/operator/not_predicate.hpp                                    |    4 
 inst/include/boost/spirit/home/x3/operator/optional.hpp                                         |    4 
 inst/include/boost/spirit/home/x3/operator/plus.hpp                                             |    4 
 inst/include/boost/spirit/home/x3/operator/sequence.hpp                                         |    4 
 inst/include/boost/spirit/home/x3/support/ast/position_tagged.hpp                               |    8 
 inst/include/boost/spirit/home/x3/support/ast/variant.hpp                                       |   61 
 inst/include/boost/spirit/home/x3/support/numeric_utils/detail/extract_int.hpp                  |   29 
 inst/include/boost/spirit/home/x3/support/numeric_utils/extract_int.hpp                         |    3 
 inst/include/boost/spirit/home/x3/support/numeric_utils/extract_real.hpp                        |    5 
 inst/include/boost/spirit/home/x3/support/numeric_utils/sign.hpp                                |   20 
 inst/include/boost/spirit/home/x3/support/traits/attribute_category.hpp                         |   42 
 inst/include/boost/spirit/home/x3/support/traits/container_traits.hpp                           |   11 
 inst/include/boost/spirit/home/x3/support/traits/is_range.hpp                                   |only
 inst/include/boost/spirit/home/x3/support/traits/move_to.hpp                                    |   19 
 inst/include/boost/spirit/home/x3/support/traits/tuple_traits.hpp                               |    9 
 inst/include/boost/spirit/home/x3/support/utility/error_reporting.hpp                           |    7 
 inst/include/boost/spirit/home/x3/support/utility/utf8.hpp                                      |   38 
 inst/include/boost/spirit/home/x3/version.hpp                                                   |    2 
 inst/include/boost/spirit/include/support_any_if_ns_so.hpp                                      |only
 inst/include/boost/spirit/include/support_any_ns_so.hpp                                         |only
 inst/include/boost/spirit/include/version.hpp                                                   |    2 
 inst/include/boost/spirit/repository/home/karma/directive/confix.hpp                            |    4 
 inst/include/boost/spirit/repository/home/karma/nonterminal/subrule.hpp                         |  179 
 inst/include/boost/spirit/repository/home/qi/directive/confix.hpp                               |    4 
 inst/include/boost/spirit/repository/home/qi/directive/distinct.hpp                             |    4 
 inst/include/boost/spirit/repository/home/qi/directive/kwd.hpp                                  |   18 
 inst/include/boost/spirit/repository/home/qi/directive/seek.hpp                                 |    4 
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 inst/include/boost/system/error_code.hpp                                                        | 1370 +--
 inst/include/boost/system/system_error.hpp                                                      |    8 
 inst/include/boost/test/detail/enable_warnings.hpp                                              |    2 
 inst/include/boost/test/detail/global_typedef.hpp                                               |   34 
 inst/include/boost/test/detail/suppress_warnings.hpp                                            |    9 
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 inst/include/boost/test/impl/debug.ipp                                                          |    2 
 inst/include/boost/test/impl/decorator.ipp                                                      |   26 
 inst/include/boost/test/impl/execution_monitor.ipp                                              |   32 
 inst/include/boost/test/impl/framework.ipp                                                      |   90 
 inst/include/boost/test/impl/junit_log_formatter.ipp                                            |   12 
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 inst/include/boost/test/impl/unit_test_monitor.ipp                                              |    3 
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 inst/include/boost/test/parameterized_test.hpp                                                  |    6 
 inst/include/boost/test/progress_monitor.hpp                                                    |    5 
 inst/include/boost/test/results_collector.hpp                                                   |   11 
 inst/include/boost/test/test_framework_init_observer.hpp                                        |    6 
 inst/include/boost/test/tools/assertion.hpp                                                     |    9 
 inst/include/boost/test/tools/collection_comparison_op.hpp                                      |    1 
 inst/include/boost/test/tools/detail/print_helper.hpp                                           |    9 
 inst/include/boost/test/tools/floating_point_comparison.hpp                                     |    4 
 inst/include/boost/test/tools/fpc_op.hpp                                                        |    6 
 inst/include/boost/test/tree/auto_registration.hpp                                              |    7 
 inst/include/boost/test/tree/decorator.hpp                                                      |   21 
 inst/include/boost/test/tree/test_case_template.hpp                                             |   73 
 inst/include/boost/test/tree/test_unit.hpp                                                      |   26 
 inst/include/boost/test/unit_test_log.hpp                                                       |   11 
 inst/include/boost/test/unit_test_monitor.hpp                                                   |    9 
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 inst/include/boost/test/unit_test_suite.hpp                                                     |   16 
 inst/include/boost/test/utils/basic_cstring/basic_cstring.hpp                                   |    4 
 inst/include/boost/test/utils/basic_cstring/compare.hpp                                         |    2 
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 inst/include/boost/test/utils/named_params.hpp                                                  |    4 
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 inst/include/boost/test/utils/setcolor.hpp                                                      |  212 
 inst/include/boost/test/utils/xml_printer.hpp                                                   |    2 
 inst/include/boost/thread/detail/config.hpp                                                     |   60 
 inst/include/boost/thread/detail/move.hpp                                                       |   19 
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 inst/include/boost/thread/lock_guard.hpp                                                        |    8 
 inst/include/boost/thread/lockable_traits.hpp                                                   |   31 
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 inst/include/boost/thread/win32/thread_data.hpp                                                 |  211 
 inst/include/boost/thread/win32/thread_heap_alloc.hpp                                           |    6 
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 inst/include/boost/thread/xtime.hpp                                                             |   12 
 inst/include/boost/throw_exception.hpp                                                          |   17 
 inst/include/boost/timer/config.hpp                                                             |   31 
 inst/include/boost/timer/timer.hpp                                                              |    1 
 inst/include/boost/token_functions.hpp                                                          |    1 
 inst/include/boost/tuple/detail/tuple_basic.hpp                                                 |    2 
 inst/include/boost/type_index.hpp                                                               |    2 
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 inst/include/boost/type_index/stl_type_index.hpp                                                |   42 
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 inst/include/boost/type_traits.hpp                                                              |    3 
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 inst/include/boost/type_traits/conditional.hpp                                                  |    2 
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 inst/include/boost/typeof/dmc/typeof_impl.hpp                                                   |    8 
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 inst/include/boost/typeof/int_encoding.hpp                                                      |    9 
 inst/include/boost/typeof/modifiers.hpp                                                         |   10 
 inst/include/boost/typeof/msvc/typeof_impl.hpp                                                  |   18 
 inst/include/boost/typeof/native.hpp                                                            |    6 
 inst/include/boost/typeof/pointers_data_members.hpp                                             |    4 
 inst/include/boost/typeof/register_functions_iterate.hpp                                        |   12 
 inst/include/boost/typeof/register_mem_functions.hpp                                            |    2 
 inst/include/boost/typeof/std/functional.hpp                                                    |    6 
 inst/include/boost/typeof/std/memory.hpp                                                        |    2 
 inst/include/boost/typeof/template_encoding.hpp                                                 |    8 
 inst/include/boost/typeof/template_template_param.hpp                                           |    4 
 inst/include/boost/typeof/type_encoding.hpp                                                     |    4 
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 inst/include/boost/typeof/typeof_impl.hpp                                                       |   32 
 inst/include/boost/typeof/unsupported.hpp                                                       |    2 
 inst/include/boost/typeof/vector.hpp                                                            |   10 
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 inst/include/boost/typeof/vector200.hpp                                                         |  802 -
 inst/include/boost/typeof/vector50.hpp                                                          |  202 
 inst/include/boost/units/base_dimension.hpp                                                     |   10 
 inst/include/boost/units/base_unit.hpp                                                          |   10 
 inst/include/boost/units/config.hpp                                                             |    2 
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 inst/include/boost/units/detail/conversion_impl.hpp                                             |   50 
 inst/include/boost/units/detail/linear_algebra.hpp                                              |   10 
 inst/include/boost/units/detail/one.hpp                                                         |   31 
 inst/include/boost/units/detail/ordinal.hpp                                                     |    4 
 inst/include/boost/units/detail/prevent_redefinition.hpp                                        |    8 
 inst/include/boost/units/detail/static_rational_power.hpp                                       |   39 
 inst/include/boost/units/detail/unscale.hpp                                                     |   23 
 inst/include/boost/units/io.hpp                                                                 |   14 
 inst/include/boost/units/operators.hpp                                                          |    4 
 inst/include/boost/units/quantity.hpp                                                           |  128 
 inst/include/boost/units/scale.hpp                                                              |   16 
 inst/include/boost/units/static_constant.hpp                                                    |    7 
 inst/include/boost/units/static_rational.hpp                                                    |   22 
 inst/include/boost/units/unit.hpp                                                               |   18 
 inst/include/boost/unordered/detail/fwd.hpp                                                     |   13 
 inst/include/boost/unordered/detail/implementation.hpp                                          |  742 +
 inst/include/boost/unordered/unordered_map.hpp                                                  |  298 
 inst/include/boost/unordered/unordered_set.hpp                                                  |  245 
 inst/include/boost/utility.hpp                                                                  |    9 
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 inst/include/boost/utility/detail/result_of_iterate.hpp                                         |   24 
 inst/include/boost/utility/result_of.hpp                                                        |   59 
 inst/include/boost/utility/string_ref.hpp                                                       |    2 
 inst/include/boost/utility/string_view.hpp                                                      |   32 
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 inst/include/boost/uuid/name_generator.hpp                                                      |    2 
 inst/include/boost/uuid/name_generator_md5.hpp                                                  |    2 
 inst/include/boost/uuid/name_generator_sha1.hpp                                                 |    2 
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 inst/include/boost/variant/bad_visit.hpp                                                        |    2 
 inst/include/boost/variant/detail/apply_visitor_unary.hpp                                       |   21 
 inst/include/boost/variant/detail/substitute.hpp                                                |   28 
 inst/include/boost/variant/get.hpp                                                              |    2 
 inst/include/boost/variant/variant.hpp                                                          |    4 
 inst/include/boost/version.hpp                                                                  |    4 
 inst/include/boost/winapi/access_rights.hpp                                                     |   88 
 inst/include/boost/winapi/apc.hpp                                                               |    4 
 inst/include/boost/winapi/basic_types.hpp                                                       |  117 
 inst/include/boost/winapi/bcrypt.hpp                                                            |   10 
 inst/include/boost/winapi/character_code_conversion.hpp                                         |   78 
 inst/include/boost/winapi/condition_variable.hpp                                                |   16 
 inst/include/boost/winapi/config.hpp                                                            |   32 
 inst/include/boost/winapi/critical_section.hpp                                                  |   40 
 inst/include/boost/winapi/crypt.hpp                                                             |   99 
 inst/include/boost/winapi/dbghelp.hpp                                                           |   74 
 inst/include/boost/winapi/debugapi.hpp                                                          |    6 
 inst/include/boost/winapi/directory_management.hpp                                              |   12 
 inst/include/boost/winapi/dll.hpp                                                               |   54 
 inst/include/boost/winapi/environment.hpp                                                       |   41 
 inst/include/boost/winapi/error_codes.hpp                                                       |  440 
 inst/include/boost/winapi/error_handling.hpp                                                    |   62 
 inst/include/boost/winapi/event.hpp                                                             |   42 
 inst/include/boost/winapi/file_management.hpp                                                   |  212 
 inst/include/boost/winapi/file_mapping.hpp                                                      |   92 
 inst/include/boost/winapi/get_current_process.hpp                                               |    2 
 inst/include/boost/winapi/get_current_process_id.hpp                                            |    2 
 inst/include/boost/winapi/get_current_thread.hpp                                                |    2 
 inst/include/boost/winapi/get_current_thread_id.hpp                                             |    2 
 inst/include/boost/winapi/get_last_error.hpp                                                    |    2 
 inst/include/boost/winapi/get_process_times.hpp                                                 |    2 
 inst/include/boost/winapi/get_system_directory.hpp                                              |    4 
 inst/include/boost/winapi/get_thread_times.hpp                                                  |    2 
 inst/include/boost/winapi/handle_info.hpp                                                       |   12 
 inst/include/boost/winapi/handles.hpp                                                           |   19 
 inst/include/boost/winapi/heap_memory.hpp                                                       |   14 
 inst/include/boost/winapi/init_once.hpp                                                         |   40 
 inst/include/boost/winapi/jobs.hpp                                                              |   38 
 inst/include/boost/winapi/limits.hpp                                                            |   18 
 inst/include/boost/winapi/local_memory.hpp                                                      |    6 
 inst/include/boost/winapi/mutex.hpp                                                             |   32 
 inst/include/boost/winapi/overlapped.hpp                                                        |    2 
 inst/include/boost/winapi/page_protection_flags.hpp                                             |   36 
 inst/include/boost/winapi/pipes.hpp                                                             |   82 
 inst/include/boost/winapi/priority_class.hpp                                                    |   36 
 inst/include/boost/winapi/process.hpp                                                           |  231 
 inst/include/boost/winapi/security.hpp                                                          |    4 
 inst/include/boost/winapi/semaphore.hpp                                                         |   28 
 inst/include/boost/winapi/shell.hpp                                                             |   72 
 inst/include/boost/winapi/show_window.hpp                                                       |  100 
 inst/include/boost/winapi/srw_lock.hpp                                                          |   14 
 inst/include/boost/winapi/stack_backtrace.hpp                                                   |   11 
 inst/include/boost/winapi/system.hpp                                                            |    4 
 inst/include/boost/winapi/thread.hpp                                                            |    6 
 inst/include/boost/winapi/thread_pool.hpp                                                       |   72 
 inst/include/boost/winapi/time.hpp                                                              |   16 
 inst/include/boost/winapi/timers.hpp                                                            |    4 
 inst/include/boost/winapi/tls.hpp                                                               |   14 
 inst/include/boost/winapi/wait.hpp                                                              |   42 
 inst/include/boost/winapi/waitable_timer.hpp                                                    |   32 
 1971 files changed, 54849 insertions(+), 37441 deletions(-)

More information about BH at CRAN
Permanent link

Package basictabler updated to version 0.1.1 with previous version 0.1.0 dated 2017-09-30

Title: Construct Rich Tables for Output to 'HTML'/'Excel'
Description: Easily create tables from data frames/matrices. Create/manipulate tables row-by-row, column-by-column or cell-by-cell. Use common formatting/styling to output rich tables as 'HTML', 'HTML widgets' or to 'Excel'.
Author: Christopher Bailiss [aut, cre]
Maintainer: Christopher Bailiss <cbailiss@gmail.com>

Diff between basictabler versions 0.1.0 dated 2017-09-30 and 0.1.1 dated 2019-01-07

 DESCRIPTION                            |    8 +--
 MD5                                    |   46 +++++++++---------
 NEWS.md                                |    9 +++
 README.md                              |   56 +++++++++++++++++++++-
 build/vignette.rds                     |binary
 inst/doc/v01-introduction.html         |   58 +++++++++++++++-------
 inst/doc/v02-workingwithcells.Rmd      |    4 -
 inst/doc/v02-workingwithcells.html     |   84 ++++++++++++++++++++-------------
 inst/doc/v03-outputs.Rmd               |    2 
 inst/doc/v03-outputs.html              |   34 +++++++++++--
 inst/doc/v04-styling.Rmd               |    2 
 inst/doc/v04-styling.html              |   70 ++++++++++++++++++---------
 inst/doc/v05-findingandformatting.Rmd  |    2 
 inst/doc/v05-findingandformatting.html |   82 ++++++++++++++++++++------------
 inst/doc/v06-shiny.Rmd                 |    2 
 inst/doc/v06-shiny.html                |   28 +++++++++--
 inst/doc/v07-excelexport.Rmd           |    2 
 inst/doc/v07-excelexport.html          |   28 +++++++++--
 vignettes/v02-workingwithcells.Rmd     |    4 -
 vignettes/v03-outputs.Rmd              |    2 
 vignettes/v04-styling.Rmd              |    2 
 vignettes/v05-findingandformatting.Rmd |    2 
 vignettes/v06-shiny.Rmd                |    2 
 vignettes/v07-excelexport.Rmd          |    2 
 24 files changed, 373 insertions(+), 158 deletions(-)

More information about basictabler at CRAN
Permanent link

Package badgecreatr updated to version 0.2.0 with previous version 0.1.0 dated 2016-07-03

Title: Create Badges for 'Travis', 'Repostatus' 'Codecov.io' Etc in Github Readme
Description: Tired of copy and pasting almost identical markdown for badges in every new R-package that you create, on Github or other code-sharing sites? This package allows you to easily paste badges. If you want to, it will also search your DESCRIPTION file and extract the package name, license, R-version, and current projectversion and transform that into badges. It will also search for a ".travis.yml" file and create a "Travis"" badge, if you use "Codecov.io" to check your code coverage after a "Travis" build this package will also build a "Codecov.io"-badge. All the badges can be placed individually or can be placed below the top "YAML"" content of your "RMarkdown file" (Readme.Rmd) or "README.md" file. Currently creates badges for Projectstatus ("Repostatus.org"), license Travis Build Status, Codecov, Minimal R version, CRAN status, CRAN downloads, Github stars and forks, Package rank, rdocumentation, current version of your package and last change of "README.Rmd".
Author: Roel M. Hogervorst [cre, aut]
Maintainer: Roel M. Hogervorst <hogervorst.rm@gmail.com>

Diff between badgecreatr versions 0.1.0 dated 2016-07-03 and 0.2.0 dated 2019-01-07

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Package tcR updated to version 2.2.3 with previous version 2.2.2 dated 2018-08-01

Title: Advanced Data Analysis of Immune Receptor Repertoires
Description: Platform for the advanced analysis of T cell receptor and Immunoglobulin repertoires data and visualisation of the analysis results.
Author: Vadim Nazarov
Maintainer: Vadim Nazarov <vdm.nazarov@gmail.com>

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Package tbltools updated to version 0.0.3 with previous version 0.0.2 dated 2018-10-30

Title: Tools for Working with Tibbles
Description: Tools for working with tibbles, or data.frame-like objects generated by the 'tibble' package <https://tibble.tidyverse.org/>. Functions assist in converting objects to tibbles and creating frequency tables.
Author: Michael W. Kearney [aut, cre] (<https://orcid.org/0000-0002-0730-4694>)
Maintainer: Michael W. Kearney <kearneymw@missouri.edu>

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Package shades updated to version 1.3.1 with previous version 1.3.0 dated 2018-11-19

Title: Simple Colour Manipulation
Description: Functions for easily manipulating colours, creating colour scales and calculating colour distances.
Author: Jon Clayden
Maintainer: Jon Clayden <code@clayden.org>

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Package R.temis updated to version 0.1.1 with previous version 0.1.0 dated 2018-11-19

Title: Integrated Text Mining Solution
Description: An integrated solution to perform a series of text mining tasks such as importing and cleaning a corpus, and analyses like terms and documents counts, lexical summary, terms co-occurrences and documents similarity measures, graphs of terms, correspondence analysis and hierarchical clustering. Corpora can be imported from spreadsheet-like files, directories of raw text files, as well as from 'Dow Jones Factiva', 'LexisNexis', 'Europresse' and 'Alceste' files.
Author: Milan Bouchet-Valat [aut, cre], Gilles Bastin [aut], Antoine Chollet [aut]
Maintainer: Milan Bouchet-Valat <nalimilan@club.fr>

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Package pxweb updated to version 0.9.1 with previous version 0.8.3 dated 2018-12-17

Title: R Interface to PXWEB APIs
Description: Generic interface for the PX-Web/PC-Axis API. The PX-Web/PC-Axis API is used by organizations such as Statistics Sweden and Statistics Finland to disseminate data. The R package can interact with all PX-Web/PC-Axis APIs to fetch information about the data hierarchy, extract metadata and extract and parse statistics to R data.frame format. PX-Web is a solution to disseminate PC-Axis data files in dynamic tables on the web. Since 2013 PX-Web contains an API to disseminate PC-Axis files.
Author: Mans Magnusson [aut, cre], Markus Kainu [aut], Janne Huovari [aut], Leo Lahti [aut] (<https://orcid.org/0000-0001-5537-637X>), Jan Bruusgaard [ctb], Øyvind Langsrud [ctb], Love Hansson [ctb], Eydun Nielsen [ctb], Bo Werth [ctb], Thomas Runarsson [ctb], Torbjörn Lindquist [ctb], Palmar Thorsteinsson [ctb]
Maintainer: Mans Magnusson <mons.magnusson@gmail.com>

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Package PINSPlus updated to version 1.0.3 with previous version 1.0.2 dated 2018-07-16

Title: Clustering Algorithm for Data Integration and Disease Subtyping
Description: Provides a robust approach for omics data integration and disease subtyping. 'PINSPlus' supports both single and multiple data types. The software automatically determines the optimal number of clusters and then partitions the samples in a way such that the results are robust to noise and data perturbation. 'PINSPlus' is fast and it supports parallel computing on Windows, Linux, and Mac OS.
Author: Hung Nguyen, Sangam Shrestha and Tin Nguyen
Maintainer: Hung Nguyen <hungnp@nevada.unr.edu>

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Package parlitools updated to version 0.3.0 with previous version 0.2.1 dated 2017-09-23

Title: Tools for Analysing UK Politics
Description: Provides various tools for analysing UK political data, including creating political cartograms and retrieving data.
Author: Evan Odell [aut, cre] (<https://orcid.org/0000-0003-1845-808X>)
Maintainer: Evan Odell <evanodell91@gmail.com>

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Package optigrab updated to version 0.9.2.1 with previous version 0.7.3 dated 2015-10-09

Title: Command-Line Parsing for an R World
Description: Parse options from the command-line using a simple, clean syntax. It requires little or no specification and supports short and long options, GNU-, Java- or Microsoft- style syntaxes, verb commands and more.
Author: Christopher Brown [aut, cre], Daryl McCullough [aut], Decision Patterns [cph]
Maintainer: Christopher Brown <chris.brown@decisionpatterns.com>

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Package mtconnectR updated to version 1.2.1 with previous version 1.1.0 dated 2017-03-27

Title: Read Data from Delimited 'MTConnect' Data Files and Perform some Analysis
Description: Read data in the 'MTConnect'<http://www.mtconnect.org/> standard. You can use the package to read data from historical 'MTConnect logs' along with the 'devices.xml' describing the device. The data is organised into a 'MTConnectDevice' S4 data structure and some convenience methods are also provided for basic read/view operations. The package also includes some functions for analysis of 'MTConnect' data. This includes functions to simulate data (primarily position data, feed rate and velocities) based on the G code and visualisation functions to compare the actual and simulated data.
Author: Alex Joseph [aut], Sainath Adapa [aut], Nitin Madasu [aut], Ananthapadmanabhan P [aut, cre], Devaraj Phukan [aut], Subramanyam Ravishankar [aut]
Maintainer: Ananthapadmanabhan P <ananthu@govimana.com>

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Package mitml updated to version 0.3-7 with previous version 0.3-6 dated 2018-07-10

Title: Tools for Multiple Imputation in Multilevel Modeling
Description: Provides tools for multiple imputation of missing data in multilevel modeling. Includes a user-friendly interface to the packages 'pan' and 'jomo', and several functions for visualization, data management and the analysis of multiply imputed data sets.
Author: Simon Grund [aut,cre], Alexander Robitzsch [aut], Oliver Luedtke [aut]
Maintainer: Simon Grund <grund@ipn.uni-kiel.de>

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Package git2r updated to version 0.24.0 with previous version 0.23.0 dated 2018-07-17

Title: Provides Access to Git Repositories
Description: Interface to the 'libgit2' library, which is a pure C implementation of the 'Git' core methods. Provides access to 'Git' repositories to extract data and running some basic 'Git' commands.
Author: See AUTHORS file.
Maintainer: Stefan Widgren <stefan.widgren@gmail.com>

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Package ggfocus updated to version 0.9 with previous version 0.8 dated 2018-05-29

Title: Focus on Specific Factor Levels in your ggplot()
Description: A 'ggplot2' extension that provides tools for automatically focusing specific factor levels.
Author: Victor Freguglia
Maintainer: Victor Freguglia <victorfreguglia@gmail.com>

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Package future.callr updated to version 0.4.0 with previous version 0.3.1 dated 2018-07-18

Title: A Future API for Parallel Processing using 'callr'
Description: Implementation of the Future API on top of the 'callr' package. This allows you to process futures, as defined by the 'future' package, in parallel out of the box, on your local (Linux, macOS, Windows, ...) machine. Contrary to backends relying on the 'parallel' package (e.g. 'future::multisession'), the 'callr' backend provided here can run more than 125 parallel R processes.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>

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Package errorist updated to version 0.0.2 with previous version 0.0.1 dated 2018-01-30

Title: Automatically Search Errors or Warnings
Description: Provides environment hooks that obtain errors and warnings which occur during the execution of code to automatically search for solutions.
Author: James Balamuta [aut, cre, cph] (<https://orcid.org/0000-0003-2826-8458>)
Maintainer: James Balamuta <balamut2@illinois.edu>

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Package rzeit2 updated to version 0.2.3 with previous version 0.2.0 dated 2018-10-17

Title: Client for the ZEIT ONLINE Content API
Description: Interface to gather newspaper articles from 'DIE ZEIT' and 'ZEIT ONLINE', based on a multilevel query <http://developer.zeit.de/>. A personal API key is required for usage.
Author: Jan Dix [aut, cre]
Maintainer: Jan Dix <jan.dix@uni-konstanz.de>

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Package rgdax updated to version 1.0.0 with previous version 0.6.0 dated 2018-06-17

Title: Wrapper for 'Coinbase Pro (GDAX)' Cryptocurrency Exchange
Description: Allow access to both public and private end points to Coinbase Pro (erstwhile GDAX) cryptocurrency exchange. For authenticated flow, users must have valid api, secret and passphrase to be able to connect.
Author: Dheeraj Agarwal [aut, cre]
Maintainer: Dheeraj Agarwal <dheeeraj.agarwal@gmail.com>

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Package mdmb updated to version 1.1-51 with previous version 1.0-18 dated 2018-11-06

Title: Model Based Treatment of Missing Data
Description: Contains model-based treatment of missing data for regression models with missing values in covariates or the dependent variable using maximum likelihood or Bayesian estimation (Ibrahim et al., 2005; <doi:10.1198/016214504000001844>). The regression model can be nonlinear (e.g., interaction effects, quadratic effects or B-spline functions). Multilevel models with missing data in predictors are available for Bayesian estimation. Substantive-model compatible multiple imputation can be also conducted.
Author: Alexander Robitzsch [aut, cre], Oliver Luedtke [aut]
Maintainer: Alexander Robitzsch <robitzsch@ipn.uni-kiel.de>

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New package ipptoolbox with initial version 1.2
Package: ipptoolbox
Type: Package
Title: IPP Toolbox
Version: 1.2
Date: 2019-01-02
Author: Philipp Limbourg <p.limbourg@uni-due.de>
Depends: R (>= 3.5), AlgDesign, copula, evd, triangle, kolmim
Maintainer: Philipp Limbourg <p.limbourg@uni-due.de>
Description: Uncertainty quantification and propagation in the framework of Dempster-Shafer Theory and imprecise probabilities. This toolbox offers easy-to-use methods for using imprecise probabities for applied uncertainty modelling and simulation. The package comprises the basic functionality needed, with usability similar to standard probabilistic analysis: - Fit imprecise probability distributions from data, - Define imprecise probabilities based on distribution functions, - Combine with various aggregation rules (e. g. Dempster's rule), - Plotting tools, - Propagate through arbitrary functions / simulations via Monte Carlo, - Perform sensitivity analyses with imprecise distributions, - Example models for a quick start.
License: GPL (>= 2)
LazyLoad: yes
RoxygenNote: 6.1.1
NeedsCompilation: no
Packaged: 2019-01-05 12:50:57 UTC; Philipp
Repository: CRAN
Date/Publication: 2019-01-07 17:10:09 UTC

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New package ExPosition with initial version 2.8.23
Package: ExPosition
Type: Package
Title: Exploratory Analysis with the Singular Value Decomposition
Version: 2.8.23
Date: 2018-12-27
Author: Derek Beaton, Cherise R. Chin Fatt, Herve Abdi
Maintainer: Derek Beaton <exposition.software@gmail.com>
Description: A variety of descriptive multivariate analyses with the singular value decomposition, such as principal components analysis, correspondence analysis, and multidimensional scaling. See An ExPosition of the Singular Value Decomposition in R (Beaton et al 2014) <doi:10.1016/j.csda.2013.11.006>.
License: GPL-2
Depends: prettyGraphs (>= 2.1.4)
Packaged: 2018-12-27 16:16:04 UTC; Derek
BugReports: https://github.com/derekbeaton/ExPosition-Family_OLD
NeedsCompilation: no
Repository: CRAN
Date/Publication: 2019-01-07 17:00:41 UTC

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Package subtee updated to version 0.3-4 with previous version 0.3-3 dated 2018-12-21

Title: Subgroup Treatment Effect Estimation in Clinical Trials
Description: Naive and adjusted treatment effect estimation for subgroups. Model averaging (Bornkamp et.al, 2016 <doi:10.1002/pst.1796>) and bagging (Rosenkranz, 2016 <doi:10.1002/bimj.201500147>) are proposed to address the problem of selection bias in treatment effect estimates for subgroups. The package can be used for all commonly encountered type of outcomes in clinical trials (continuous, binary, survival, count). Additional functions are provided to build the subgroup variables to be used and to plot the results using forest plots.
Author: Nicolas Ballarini [aut, cre], Bjoern Bornkamp [aut], Marius Thomas [aut, cre], Baldur Magnusson [ctb]
Maintainer: Nicolas Ballarini <nicolas.ballarini@meduniwien.ac.at>

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Package subscreen updated to version 2.0.1 with previous version 1.0.0 dated 2018-06-22

Title: Systematic Screening of Study Data for Subgroup Effects
Description: Identifying outcome relevant subgroups has now become as simple as possible! The formerly lengthy and tedious search for the needle in a haystack will be replaced by a single, comprehensive and coherent presentation. The central result of a subgroup screening is a diagram in which each single dot stands for a subgroup. The diagram may show thousands of them. The position of the dot in the diagram is determined by the sample size of the subgroup and the statistical measure of the treatment effect in that subgroup. The sample size is shown on the horizontal axis while the treatment effect is displayed on the vertical axis. Furthermore, the diagram shows the line of no effect and the overall study results. For small subgroups, which are found on the left side of the plot, larger random deviations from the mean study effect are expected, while for larger subgroups only small deviations from the study mean can be expected to be chance findings. So for a study with no conspicuous subgroup effects, the dots in the figure are expected to form a kind of funnel. Any deviations from this funnel shape hint to conspicuous subgroups.
Author: Bodo Kirsch, Susanne Lippert, Thomas Schmelter, Steffen Mueller, Christoph Muysers, Hermann Kulmann
Maintainer: Bodo Kirsch <bodo.kirsch@bayer.com>

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Package stplanr updated to version 0.2.7 with previous version 0.2.6 dated 2018-10-20

Title: Sustainable Transport Planning
Description: Functionality and data access tools for transport planning, including origin-destination analysis, route allocation and modelling travel patterns.
Author: Robin Lovelace [aut, cre] (<https://orcid.org/0000-0001-5679-6536>), Richard Ellison [aut], Barry Rowlingson [ctb] (Author of overline), Nick Bearman [ctb] (Co-author of gclip), Malcolm Morgan [ctb] (Co-author of angle_diff), Nikolai Berkoff [ctb] (Co-author of line2route), Scott Chamberlin [rev] (Scott reviewed the package for rOpenSci, see https://github.com/ropensci/onboarding/issues/10)
Maintainer: Robin Lovelace <rob00x@gmail.com>

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Package spData updated to version 0.3.0 with previous version 0.2.9.6 dated 2018-12-03

Title: Datasets for Spatial Analysis
Description: Diverse spatial datasets for demonstrating, benchmarking and teaching spatial data analysis. It includes R data of class sf (defined by the package 'sf'), Spatial ('sp'), and nb ('spdep'). Unlike other spatial data packages such as 'rnaturalearth' and 'maps', it also contains data stored in a range of file formats including GeoJSON, ESRI Shapefile and GeoPackage. Some of the datasets are designed to illustrate specific analysis techniques. cycle_hire() and cycle_hire_osm(), for example, is designed to illustrate point pattern analysis techniques.
Author: Roger Bivand [aut] (<https://orcid.org/0000-0003-2392-6140>), Jakub Nowosad [aut, cre] (<https://orcid.org/0000-0002-1057-3721>), Robin Lovelace [aut] (<https://orcid.org/0000-0001-5679-6536>), Mark Monmonier [ctb] (author of the state.vbm dataset), Greg Snow [ctb] (author of the state.vbm dataset)
Maintainer: Jakub Nowosad <nowosad.jakub@gmail.com>

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Package smartdata updated to version 1.0.1 with previous version 1.0.0 dated 2018-08-31

Title: Data Preprocessing
Description: Eases data preprocessing tasks, providing a data flow based on a pipe operator which eases cleansing, transformation, oversampling, or instance/feature selection operations.
Author: Ignacio Cordón [aut, cre], Francisco Charte [aut], Julián Luengo [aut], Salvador García [aut], Francisco Herrera [aut]
Maintainer: Ignacio Cordón <nacho.cordon.castillo@gmail.com>

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Package scorecard updated to version 0.2.0 with previous version 0.1.9 dated 2018-09-11

Title: Credit Risk Scorecard
Description: The `scorecard` package makes the development of credit risk scorecard easier and efficient by providing functions for some common tasks, such as data partition, variable selection, woe binning, scorecard scaling, performance evaluation and report generation. These functions can also used in the development of machine learning models. The references including: 1. Refaat, M. (2011, ISBN: 9781447511199). Credit Risk Scorecard: Development and Implementation Using SAS. 2. Siddiqi, N. (2006, ISBN: 9780471754510). Credit risk scorecards. Developing and Implementing Intelligent Credit Scoring.
Author: Shichen Xie [aut, cre]
Maintainer: Shichen Xie <xie@shichen.name>

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Package rsample updated to version 0.0.4 with previous version 0.0.3 dated 2018-11-20

Title: General Resampling Infrastructure
Description: Classes and functions to create and summarize different types of resampling objects (e.g. bootstrap, cross-validation).
Author: Max Kuhn [aut, cre], Hadley Wickham [aut], RStudio [cph]
Maintainer: Max Kuhn <max@rstudio.com>

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Package ProjectManagement updated to version 1.1 with previous version 1.0 dated 2018-12-09

Title: Management of Deterministic and Stochastic Projects
Description: Management problems of deterministic and stochastic projects. It obtains the duration of a project and the appropriate slack for each activity in a deterministic context. In addition it obtains a schedule of activities' time (Castro, Gómez & Tejada (2007) <doi:10.1016/j.orl.2007.01.003>). When the project is done, and the actual duration for each activity is known, then it can know how long the project is delayed and make a fair delivery of the delay between each activity (Bergantiños, Valencia-Toledo & Vidal-Puga (2018) <doi:10.1016/j.dam.2017.08.012>). In a stochastic context it can estimate the average duration of the project and plot a histogram of this duration. As in the deterministic case, it can make a distribution of the delay generated by observing the project already carried out.
Author: Juan Carlos Gonçalves Dosantos [aut, cre], Ignacio García Jurado [aut], Julián Costa Bouzas [aut]
Maintainer: Juan Carlos Gonçalves Dosantos <juan.carlos.goncalves@udc.es>

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Package OpenImageR updated to version 1.1.4 with previous version 1.1.3 dated 2018-12-09

Title: An Image Processing Toolkit
Description: Incorporates functions for image preprocessing, filtering and image recognition. The package takes advantage of 'RcppArmadillo' to speed up computationally intensive functions. The histogram of oriented gradients descriptor is a modification of the 'findHOGFeatures' function of the 'SimpleCV' computer vision platform, the average_hash(), dhash() and phash() functions are based on the 'ImageHash' python library. The Gabor Feature Extraction functions are based on 'Matlab' code of the paper, "CloudID: Trustworthy cloud-based and cross-enterprise biometric identification" by M. Haghighat, S. Zonouz, M. Abdel-Mottaleb, Expert Systems with Applications, vol. 42, no. 21, pp. 7905-7916, 2015, <doi:10.1016/j.eswa.2015.06.025>. The 'SLIC' and 'SLICO' superpixel algorithms were explained in detail in (i) "SLIC Superpixels Compared to State-of-the-art Superpixel Methods", Radhakrishna Achanta, Appu Shaji, Kevin Smith, Aurelien Lucchi, Pascal Fua, and Sabine Suesstrunk, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 34, num. 11, p. 2274-2282, May 2012, <doi:10.1109/TPAMI.2012.120> and (ii) "SLIC Superpixels", Radhakrishna Achanta, Appu Shaji, Kevin Smith, Aurelien Lucchi, Pascal Fua, and Sabine Suesstrunk, EPFL Technical Report no. 149300, June 2010.
Author: Lampros Mouselimis [aut, cre], Sight Machine [cph] (findHOGFeatures function of the SimpleCV computer vision platform), Johannes Buchner [cph] (average_hash, dhash and phash functions of the ImageHash python library), Mohammad Haghighat [cph] (Gabor Feature Extraction), Radhakrishna Achanta [cph] (Author of the C++ code of the SLIC and SLICO algorithms (for commercial use please contact the author))
Maintainer: Lampros Mouselimis <mouselimislampros@gmail.com>

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Package nmathresh updated to version 0.1.4 with previous version 0.1.3 dated 2018-03-29

Title: Thresholds and Invariant Intervals for Network Meta-Analysis
Description: Calculation and presentation of decision-invariant bias adjustment thresholds and intervals for Network Meta-Analysis, as described by Phillippo et al. (2018) <doi:10.1111/rssa.12341>. These describe the smallest changes to the data that would result in a change of decision.
Author: David Phillippo [aut, cre]
Maintainer: David Phillippo <david.phillippo@bristol.ac.uk>

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Package mvp updated to version 1.0-1 with previous version 1.0-0 dated 2018-12-30

Title: Fast Symbolic Multivariate Polynomials
Description: Fast manipulation of symbolic multivariate polynomials using the 'Map' class of the Standard Template Library. The package uses print and coercion methods from the 'mpoly' package (Kahle 2013, "Multivariate polynomials in R". The R Journal, 5(1):162), but offers speed improvements. It is comparable in speed to the 'spray' package for sparse arrays, but retains the symbolic benefits of 'mpoly'.
Author: Robin K. S. Hankin
Maintainer: Robin K. S. Hankin <hankin.robin@gmail.com>

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Package mvabund updated to version 4.0.1 with previous version 3.13.1 dated 2018-01-19

Title: Statistical Methods for Analysing Multivariate Abundance Data
Description: A set of tools for displaying, modeling and analysing multivariate abundance data in community ecology. See 'mvabund-package.Rd' for details of overall package organization. The package is implemented with the Gnu Scientific Library (<http://www.gnu.org/software/gsl/>) and 'Rcpp' (<http://dirk.eddelbuettel.com/code/rcpp.html>) 'R' / 'C++' classes.
Author: Yi Wang [aut], Ulrike Naumann [aut], Dirk Eddelbuettel [aut], John Wilshire [aut], David Warton [aut, cre], Julian Byrnes [ctb], Ralph dos Santos Silva [ctb, cph], Jenni Niku [ctb], Ian Renner [ctb], Stephen Wright [ctb]
Maintainer: David Warton <David.Warton@unsw.edu.au>

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Package moveWindSpeed updated to version 0.2.2 with previous version 0.2.1 dated 2017-02-01

Title: Estimate Wind Speeds from Bird Trajectories
Description: Estimating wind speed from trajectories of individually tracked birds using a maximum likelihood approach.
Author: Bart Kranstauber [aut, cre], Rolf Weinzierl [aut]
Maintainer: Bart Kranstauber <bart.kranstauber@ieu.uzh.ch>

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Package modeldb updated to version 0.1.1 with previous version 0.1.0 dated 2018-05-07

Title: Fits Models Inside the Database
Description: Uses 'dplyr' and 'tidyeval' to fit statistical models inside the database. It currently supports KMeans and linear regression models.
Author: Edgar Ruiz [aut, cre]
Maintainer: Edgar Ruiz <edgar@rstudio.com>

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Package mgm updated to version 1.2-5 with previous version 1.2-4 dated 2018-07-07

Title: Estimating Time-Varying k-Order Mixed Graphical Models
Description: Estimation of k-Order time-varying Mixed Graphical Models and mixed VAR(p) models via elastic-net regularized neighborhood regression. For details see linked paper.
Author: Jonas Haslbeck
Maintainer: Jonas Haslbeck <jonashaslbeck@gmail.com>

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Package matconv updated to version 0.4.0 with previous version 0.3.2 dated 2017-01-16

Title: A Code Converter from the Matlab/Octave Language to R
Description: Transferring over a code base from Matlab to R is often a repetitive and inefficient use of time. This package provides a translator for Matlab / Octave code into R code. It does some syntax changes, but most of the heavy lifting is in the function changes since the languages are so similar. Options for different data structures and the functions that can be changed are given. The Matlab code should be mostly in adherence to the standard style guide but some effort has been made to accommodate different number of spaces and other small syntax issues. This will not make the code more R friendly and may not even run afterwards. However, the rudimentary syntax, base function and data structure conversion is done quickly so that the maintainer can focus on changes to the design structure.
Author: Siddarta Jairam [aut, cre], David Hiebeler [ctb]
Maintainer: Siddarta Jairam <sidjsb@gmail.com>

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Package majesticR updated to version 0.1.1 with previous version 0.1.0 dated 2018-11-14

Title: R Interface to Access the 'Majestic' API
Description: Implements methods for querying backlink data from 'Majestic' using its API (<https://developer-support.majestic.com/api/>). 'Majestic' API uses a basic authentication with an API key. This package is used in the "Do You Need Backlinks for SEO" tutorial <https://remibacha.com/en/backlinks-r/>.
Author: Remi Bacha [aut, cre]
Maintainer: Remi Bacha <hello@remibacha.com>

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Package LocalControlStrategy updated to version 1.3.2 with previous version 1.3.1 dated 2018-10-01

Title: Local Control Strategy for Robust Analysis of Cross-Sectional Data
Description: Especially when cross-sectional data are observational, effects of treatment selection bias and confounding are revealed by using the unsupervised, nonparametric preprocessing methods central to Local Control (LC) Strategy. The LC objective is to estimate the "effect-size distribution" that best quantifies a potentially causal relationship between a numeric y-Outcome variable and a t-Treatment variable. This t-variable may be either binary {1 = "new" vs 0 = "control"} or a numeric measure of Exposure level. LC Strategy starts by CLUSTERING experimental units (patients) on baseline x-Covariates, forming mutually exclusive and exhaustive BLOCKS of relatively well-matched units. The implicit statistical model for LC is thus simple one-way ANOVA. The Within-Block measures of effect-size are Local Rank Correlations (LRCs) when Exposure is numeric with more than two levels. Otherwise, Treatment choice is Nested within BLOCKS, and effect-sizes are Local Treatment Differences (LTDs) between within-cluster y-Outcome Means ["new" minus "control"]. An Instrumental Variable (IV) method is also provided so that Local Average y-Outcomes (LAOs) within BLOCKS may also contribute information for effect-size inferences ...assuming that x-Covariates influence only Treatment choice or Exposure level and otherwise have no direct effects on y-Outcome.
Author: Bob Obenchain
Maintainer: Bob Obenchain <wizbob@att.net>

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Package ggstatsplot updated to version 0.0.8 with previous version 0.0.7 dated 2018-12-08

Title: 'ggplot2' Based Plots with Statistical Details
Description: Extension of 'ggplot2', 'ggstatsplot' creates graphics with details from statistical tests included in the plots themselves. It is targeted primarily at behavioral sciences community to provide a one-line code to generate information-rich plots for statistical analysis. of continuous (violin plots, scatterplots, histograms) or categorical (pie charts) data. Currently, it supports only the most common types of statistical tests: parametric, nonparametric, robust, and bayesian versions of t-test/anova, correlation analyses, contingency table analysis, and regression analyses.
Author: Indrajeet Patil [aut, cre] (<https://orcid.org/0000-0003-1995-6531>), Chuck Powell [ctb] (<https://orcid.org/0000-0002-3606-2188>)
Maintainer: Indrajeet Patil <patilindrajeet.science@gmail.com>

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Permanent link

Package ganalytics updated to version 0.10.6 with previous version 0.10.4 dated 2018-07-01

Title: Interact with 'Google Analytics'
Description: Functions for querying the 'Google Analytics' core reporting, real-time, multi-channel funnel and management APIs, as well as the 'Google Tag Manager' (GTM) API. Write methods are also provided for the management and GTM APIs so that you can change tag, property or view settings, for example. Define reporting queries using natural R expressions instead of being concerned as much about API technical intricacies like query syntax, character code escaping, and API limitations.
Author: Johann de Boer [aut, cre]
Maintainer: Johann de Boer <johanndeboer@gmail.com>

Diff between ganalytics versions 0.10.4 dated 2018-07-01 and 0.10.6 dated 2019-01-07

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Package frailtypack updated to version 3.0.2.1 with previous version 3.0.2 dated 2018-12-10

Title: General Frailty Models: Shared, Joint and Nested Frailty Models with Prediction; Evaluation of Failure-Time Surrogate Endpoints
Description: The following several classes of frailty models using a penalized likelihood estimation on the hazard function but also a parametric estimation can be fit using this R package: 1) A shared frailty model (with gamma or log-normal frailty distribution) and Cox proportional hazard model. Clustered and recurrent survival times can be studied. 2) Additive frailty models for proportional hazard models with two correlated random effects (intercept random effect with random slope). 3) Nested frailty models for hierarchically clustered data (with 2 levels of clustering) by including two iid gamma random effects. 4) Joint frailty models in the context of the joint modelling for recurrent events with terminal event for clustered data or not. A joint frailty model for two semi-competing risks and clustered data is also proposed. 5) Joint general frailty models in the context of the joint modelling for recurrent events with terminal event data with two independent frailty terms. 6) Joint Nested frailty models in the context of the joint modelling for recurrent events with terminal event, for hierarchically clustered data (with two levels of clustering) by including two iid gamma random effects. 7) Multivariate joint frailty models for two types of recurrent events and a terminal event. 8) Joint models for longitudinal data and a terminal event. 9) Trivariate joint models for longitudinal data, recurrent events and a terminal event. 10) Joint frailty models for the validation of surrogate endpoints in multiple randomized clinical trials with failure-time endpoints Prediction values are available (for a terminal event or for a new recurrent event). Left-truncated (not for Joint model), right-censored data, interval-censored data (only for Cox proportional hazard and shared frailty model) and strata are allowed. In each model, the random effects have the gamma or normal distribution. Now, you can also consider time-varying covariates effects in Cox, shared and joint frailty models (1-5). The package includes concordance measures for Cox proportional hazards models and for shared frailty models.
Author: Virginie Rondeau, Juan R. Gonzalez, Yassin Mazroui, Audrey Mauguen, Amadou Diakite, Alexandre Laurent, Myriam Lopez, Agnieszka Krol and Casimir L. Sofeu
Maintainer: Virginie Rondeau <Virginie.Rondeau@inserm.fr>

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Package doFuture updated to version 0.7.0 with previous version 0.6.0 dated 2017-10-20

Title: A Universal Foreach Parallel Adapter using the Future API of the 'future' Package
Description: Provides a '%dopar%' adapter such that any type of futures can be used as backends for the 'foreach' framework.
Author: Henrik Bengtsson [aut, cre, cph]
Maintainer: Henrik Bengtsson <henrikb@braju.com>

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Package DeclareDesign updated to version 0.14.0 with previous version 0.12.0 dated 2018-11-09

Title: Declare and Diagnose Research Designs
Description: Researchers can characterize and learn about the properties of research designs before implementation using `DeclareDesign`. Ex ante declaration and diagnosis of designs can help researchers clarify the strengths and limitations of their designs and to improve their properties, and can help readers evaluate a research strategy prior to implementation and without access to results. It can also make it easier for designs to be shared, replicated, and critiqued.
Author: Graeme Blair [aut, cre], Jasper Cooper [aut], Alexander Coppock [aut], Macartan Humphreys [aut], Neal Fultz [aut]
Maintainer: Graeme Blair <graeme.blair@ucla.edu>

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Package apa updated to version 0.3.1 with previous version 0.3.0 dated 2018-10-16

Title: Format Outputs of Statistical Tests According to APA Guidelines
Description: Formatter functions in the 'apa' package take the return value of a statistical test function, e.g. a call to chisq.test() and return a string formatted according to the guidelines of the APA (American Psychological Association).
Author: Daniel Gromer [aut, cre]
Maintainer: Daniel Gromer <dgromer@mailbox.org>

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Package sealr (with last version 0.1.1) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2018-06-30 0.1.1
2018-04-06 0.1.0

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Package ExPosition (with last version 2.8.19) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2013-12-10 2.8.19
2013-06-15 2.1.3
2012-07-12 1.1
2012-06-20 1.0

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Package cvequality updated to version 0.2.0 with previous version 0.1.3 dated 2018-03-31

Title: Tests for the Equality of Coefficients of Variation from Multiple Groups
Description: Contains functions for testing for significant differences between multiple coefficients of variation. Includes Feltz and Miller's (1996) <DOI:10.1002/(SICI)1097-0258(19960330)15:6%3C647::AID-SIM184%3E3.0.CO;2-P> asymptotic test and Krishnamoorthy and Lee's (2014) <DOI:10.1007/s00180-013-0445-2> modified signed-likelihood ratio test. See the vignette for more, including full details of citations.
Author: Ben Marwick [aut, cre], Kalimuthu Krishnamoorthy [aut]
Maintainer: Ben Marwick <benmarwick@gmail.com>

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Package coveffectsplot updated to version 0.0.2 with previous version 0.0.1 dated 2018-11-26

Title: Produce Forest Plots to Visualize Covariate Effects
Description: Produce forest plots to visualize covariate effects using either the command line or an interactive 'Shiny' application.
Author: Samer Mouksassi [aut, cre] (<https://orcid.org/0000-0002-7152-6654>), Dean Attali [ctb]
Maintainer: Samer Mouksassi <samermouksassi@gmail.com>

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Package RSuite updated to version 0.35-250 with previous version 0.34-248 dated 2018-12-13

Title: Supports Developing, Building and Deploying R Solution
Description: Supports safe and reproducible solutions development in R. It will help you with environment separation per project, dependency management, local packages creation and preparing deployment packs for your solutions.
Author: Walerian Sokolowski [aut, cre], Wit Jakuczun [aut], Yulia Yakimechko [aut], Mateusz Kalinowski [aut], Ryszard Szymanski [aut], WLOG Solutions [cph], R Consortium [ctb] (Definitions of system requirements are taken from sysreqsdb project.)
Maintainer: Walerian Sokolowski <rsuite@wlogsolutions.com>

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Package IRkernel updated to version 0.8.15 with previous version 0.8.14 dated 2018-11-16

Title: Native R Kernel for the 'Jupyter Notebook'
Description: The R kernel for the 'Jupyter' environment executes R code which the front-end ('Jupyter Notebook' or other front-ends) submits to the kernel via the network.
Author: Thomas Kluyver [aut, cph], Philipp Angerer [aut, cph, cre] (<https://orcid.org/0000-0002-0369-2888>), Jan Schulz [aut, cph], Karthik Ram [aut, cph]
Maintainer: Philipp Angerer <phil.angerer@gmail.com>

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Package FIT updated to version 0.0.6 with previous version 0.0.5 dated 2018-05-08

Title: Transcriptomic Dynamics Models in Field Conditions
Description: Provides functionality for constructing statistical models of transcriptomic dynamics in field conditions. It further offers the function to predict expression of a gene given the attributes of samples and meteorological data. Nagano, A. J., Sato, Y., Mihara, M., Antonio, B. A., Motoyama, R., Itoh, H., Naganuma, Y., and Izawa, T. (2012). <doi:10.1016/j.cell.2012.10.048>. Iwayama, K., Aisaka, Y., Kutsuna, N., and Nagano, A. J. (2017). <doi:10.1093/bioinformatics/btx049>.
Author: Koji Iwayama [cre], Yuri Aisaka [aut]
Maintainer: Koji Iwayama <fieldtranscriptome@gmail.com>

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Package DiscreteFDR updated to version 1.2 with previous version 1.1 dated 2018-09-12

Title: Multiple Testing Procedures with Adaptation for Discrete Tests
Description: Multiple testing procedures described in the paper Döhler, Durand and Roquain (2018) "New FDR bounds for discrete and heterogeneous tests" <doi:10.1214/18-EJS1441>. The main procedures of the paper (HSU and HSD), their adaptive counterparts (AHSU and AHSD), and the HBR variant are available and are coded to take as input a set of observed p-values and their discrete support under the null. A function to compute such p-values and supports for Fisher's exact tests is also provided, along with a wrapper allowing to apply discrete procedures directly from contingency tables.
Author: Sebastian Döhler [ctb], Guillermo Durand [aut, cre], Florian Junge [aut], Etienne Roquain [ctb]
Maintainer: Guillermo Durand <guillermo.durand@polytechnique.org>

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Package ChemometricsWithR updated to version 0.1.13 with previous version 0.1.11 dated 2017-09-01

Title: Chemometrics with R - Multivariate Data Analysis in the Natural Sciences and Life Sciences
Description: Functions and scripts used in the book "Chemometrics with R - Multivariate Data Analysis in the Natural Sciences and Life Sciences" by Ron Wehrens, Springer (2011). Data used in the package are available from github.
Author: Ron Wehrens
Maintainer: Ron Wehrens <ron.wehrens@gmail.com>

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Package cansim updated to version 0.2.3 with previous version 0.2.2 dated 2018-12-18

Title: Accessing Statistics Canada Data Table and Vectors
Description: Searches for, accesses, and retrieves new-format and old-format Statistics Canada data tables, as well as individual vectors, as tidy data frames. This package deals with encoding issues, allows for bilingual English or French language data retrieval, and bundles convenience functions to make it easier to work with retrieved table data. Optional caching features are provided.
Author: Jens von Bergmann [cre], Dmitry Shkolnik [aut]
Maintainer: Jens von Bergmann <jens@mountainmath.ca>

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Package BCDating updated to version 0.9.8 with previous version 0.9.7 dated 2014-12-30

Title: Business Cycle Dating and Plotting Tools
Description: Tools for Dating Business Cycles using Harding-Pagan (Quarterly Bry-Boschan) method and various plotting features.
Author: Majid Einian [aut, cre]
Maintainer: Majid Einian <m.einian@mbri.ac.ir>

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Package tseriesChaos updated to version 0.1-13.1 with previous version 0.1-13 dated 2013-04-29

Title: Analysis of Nonlinear Time Series
Description: Routines for the analysis of nonlinear time series. This work is largely inspired by the TISEAN project, by Rainer Hegger, Holger Kantz and Thomas Schreiber: <http://www.mpipks-dresden.mpg.de/~tisean/>.
Author: Antonio, Fabio Di Narzo
Maintainer: Antonio Fabio Di Narzo <antonio.fabio@gmail.com>

Diff between tseriesChaos versions 0.1-13 dated 2013-04-29 and 0.1-13.1 dated 2019-01-07

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Package simexaft updated to version 1.0.7.1 with previous version 1.0.7 dated 2014-01-19

Title: simexaft
Description: Implement of the Simulation-Extrapolation (SIMEX) algorithm for the accelerated failure time (AFT) with covariates subject to measurement error.
Author: Juan Xiong <xiongjuan2000@gmail.com>, Wenqing He <whe@stats.uwo.ca>, Grace Y. Yi<yyi@uwaterloo.ca>
Maintainer: Juan Xiong <xiongjuan2000@gmail.com>

Diff between simexaft versions 1.0.7 dated 2014-01-19 and 1.0.7.1 dated 2019-01-07

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Package orderedLasso updated to version 1.7.1 with previous version 1.7 dated 2014-11-27

Title: Ordered Lasso and Time-Lag Sparse Regression
Description: Ordered lasso and time-lag sparse regression. Ordered Lasso fits a linear model and imposes an order constraint on the coefficients. It writes the coefficients as positive and negative parts, and requires positive parts and negative parts are non-increasing and positive. Time-Lag Lasso generalizes the ordered Lasso to a general data matrix with multiple predictors. For more details, see Suo, X.,Tibshirani, R., (2014) 'An Ordered Lasso and Sparse Time-lagged Regression'.
Author: Jerome Friedman, Xiaotong Suo and Robert Tibshirani
Maintainer: Xiaotong Suo <xiaotong@stanford.edu>

Diff between orderedLasso versions 1.7 dated 2014-11-27 and 1.7.1 dated 2019-01-07

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Package FREGAT (with last version 1.1.0) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2018-01-15 1.1.0
2017-04-21 1.0.3
2016-09-19 1.0.2
2016-04-12 1.0.1
2016-03-01 1.0

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