Title: Time-Weighted Dynamic Time Warping for Satellite Image Time
Series Analysis
Description: Provides an implementation of the Time-Weighted Dynamic Time
Warping (TWDTW) method for land cover mapping using satellite image time series.
TWDTW is based on the Dynamic Time Warping technique and has achieved high
accuracy for land cover classification using satellite data. The method is
based on comparing unclassified satellite image time series with a set of known
temporal patterns (e.g. phenological cycles associated with the vegetation).
Using 'dtwSat' the user can build temporal patterns for land cover types, apply
the TWDTW analysis for satellite datasets, visualize the results of the time
series analysis, produce land cover maps, create temporal plots for land cover
change, and compute accuracy assessment metrics.
Author: Victor Maus [aut, cre] (<https://orcid.org/0000-0002-7385-4723>),
Marius Appel [ctb],
Nikolas Kuschnig [ctb],
Toni Giorgino [ctb]
Maintainer: Victor Maus <vwmaus1@gmail.com>
Diff between dtwSat versions 0.2.4 dated 2018-05-25 and 0.2.5 dated 2019-01-27
dtwSat-0.2.4/dtwSat/build/vignette.rds |only dtwSat-0.2.4/dtwSat/inst/doc |only dtwSat-0.2.4/dtwSat/tests |only dtwSat-0.2.4/dtwSat/vignettes |only dtwSat-0.2.5/dtwSat/DESCRIPTION | 17 - dtwSat-0.2.5/dtwSat/MD5 | 204 +++++++----------- dtwSat-0.2.5/dtwSat/NAMESPACE | 1 dtwSat-0.2.5/dtwSat/NEWS.md | 12 + dtwSat-0.2.5/dtwSat/R/class-crossValidation.R | 5 dtwSat-0.2.5/dtwSat/R/class-twdtwAssessment.R | 11 dtwSat-0.2.5/dtwSat/R/class-twdtwMatches.R | 5 dtwSat-0.2.5/dtwSat/R/class-twdtwRaster.R | 25 +- dtwSat-0.2.5/dtwSat/R/class-twdtwTimeSeries.R | 9 dtwSat-0.2.5/dtwSat/R/createPatterns.R | 15 - dtwSat-0.2.5/dtwSat/R/data.R | 68 +++--- dtwSat-0.2.5/dtwSat/R/dwtSat.R | 9 dtwSat-0.2.5/dtwSat/R/getInternals.R | 8 dtwSat-0.2.5/dtwSat/R/getTimeSeries.R | 26 +- dtwSat-0.2.5/dtwSat/R/linearWeight.R | 14 - dtwSat-0.2.5/dtwSat/R/logisticWeight.R | 14 - dtwSat-0.2.5/dtwSat/R/methods.R | 14 - dtwSat-0.2.5/dtwSat/R/miscellaneous.R | 28 +- dtwSat-0.2.5/dtwSat/R/plot.R | 6 dtwSat-0.2.5/dtwSat/R/plotAccuracy.R | 15 - dtwSat-0.2.5/dtwSat/R/plotAdjustedArea.R | 5 dtwSat-0.2.5/dtwSat/R/plotAlignments.R | 7 dtwSat-0.2.5/dtwSat/R/plotArea.R | 7 dtwSat-0.2.5/dtwSat/R/plotChanges.R | 9 dtwSat-0.2.5/dtwSat/R/plotClassification.R | 11 dtwSat-0.2.5/dtwSat/R/plotCostMatrix.R | 11 dtwSat-0.2.5/dtwSat/R/plotDistance.R | 7 dtwSat-0.2.5/dtwSat/R/plotMapSamples.R | 9 dtwSat-0.2.5/dtwSat/R/plotMaps.R | 7 dtwSat-0.2.5/dtwSat/R/plotMatches.R | 19 + dtwSat-0.2.5/dtwSat/R/plotPaths.R | 11 dtwSat-0.2.5/dtwSat/R/plotPatterns.R | 9 dtwSat-0.2.5/dtwSat/R/plotTimeSeries.R | 9 dtwSat-0.2.5/dtwSat/R/resampleTimeSeries.R | 5 dtwSat-0.2.5/dtwSat/R/subset.R | 15 - dtwSat-0.2.5/dtwSat/R/twdtw.R | 4 dtwSat-0.2.5/dtwSat/R/twdtwApply.R | 53 ++-- dtwSat-0.2.5/dtwSat/R/twdtwApplyParallel.R | 24 -- dtwSat-0.2.5/dtwSat/R/twdtwAssess.R | 71 +++--- dtwSat-0.2.5/dtwSat/R/twdtwClassify.R | 23 +- dtwSat-0.2.5/dtwSat/R/twdtwCrossValidate.R | 11 dtwSat-0.2.5/dtwSat/R/twdtwXtable.R | 39 +-- dtwSat-0.2.5/dtwSat/R/zzz.R | 3 dtwSat-0.2.5/dtwSat/build/partial.rdb |only dtwSat-0.2.5/dtwSat/inst/CITATION | 64 +++-- dtwSat-0.2.5/dtwSat/inst/REFERENCES.bib |only dtwSat-0.2.5/dtwSat/man/MOD13Q1.MT.yearly.patterns.Rd | 16 - dtwSat-0.2.5/dtwSat/man/MOD13Q1.patterns.list.Rd | 16 - dtwSat-0.2.5/dtwSat/man/MOD13Q1.ts.Rd | 14 - dtwSat-0.2.5/dtwSat/man/MOD13Q1.ts.labels.Rd | 4 dtwSat-0.2.5/dtwSat/man/MOD13Q1.ts.list.Rd | 14 - dtwSat-0.2.5/dtwSat/man/createPatterns.Rd | 13 - dtwSat-0.2.5/dtwSat/man/dtwSat.Rd | 8 dtwSat-0.2.5/dtwSat/man/get.Rd | 5 dtwSat-0.2.5/dtwSat/man/getDatesFromDOY.Rd | 13 - dtwSat-0.2.5/dtwSat/man/getTimeSeries.Rd | 12 - dtwSat-0.2.5/dtwSat/man/linearWeight.Rd | 14 - dtwSat-0.2.5/dtwSat/man/logisticWeight.Rd | 14 - dtwSat-0.2.5/dtwSat/man/plot.Rd | 4 dtwSat-0.2.5/dtwSat/man/plotAccuracy.Rd | 11 dtwSat-0.2.5/dtwSat/man/plotAdjustedArea.Rd | 13 - dtwSat-0.2.5/dtwSat/man/plotAlignments.Rd | 7 dtwSat-0.2.5/dtwSat/man/plotArea.Rd | 12 - dtwSat-0.2.5/dtwSat/man/plotChanges.Rd | 7 dtwSat-0.2.5/dtwSat/man/plotClassification.Rd | 11 dtwSat-0.2.5/dtwSat/man/plotCostMatrix.Rd | 9 dtwSat-0.2.5/dtwSat/man/plotDistance.Rd | 5 dtwSat-0.2.5/dtwSat/man/plotMapSamples.Rd | 11 dtwSat-0.2.5/dtwSat/man/plotMaps.Rd | 11 dtwSat-0.2.5/dtwSat/man/plotMatches.Rd | 13 - dtwSat-0.2.5/dtwSat/man/plotPaths.Rd | 12 - dtwSat-0.2.5/dtwSat/man/plotPatterns.Rd | 9 dtwSat-0.2.5/dtwSat/man/plotTimeSeries.Rd | 9 dtwSat-0.2.5/dtwSat/man/reexports.Rd | 3 dtwSat-0.2.5/dtwSat/man/resampleTimeSeries.Rd | 5 dtwSat-0.2.5/dtwSat/man/shiftDates.Rd | 11 dtwSat-0.2.5/dtwSat/man/subset.Rd | 15 - dtwSat-0.2.5/dtwSat/man/twdtwApply.Rd | 62 ++--- dtwSat-0.2.5/dtwSat/man/twdtwApplyParallel.Rd | 68 ++---- dtwSat-0.2.5/dtwSat/man/twdtwAssess.Rd | 75 ++++-- dtwSat-0.2.5/dtwSat/man/twdtwAssessment-class.Rd | 11 dtwSat-0.2.5/dtwSat/man/twdtwClassify.Rd | 55 +++- dtwSat-0.2.5/dtwSat/man/twdtwCrossValidate.Rd | 11 dtwSat-0.2.5/dtwSat/man/twdtwCrossValidation-class.Rd | 5 dtwSat-0.2.5/dtwSat/man/twdtwMatches-class.Rd | 5 dtwSat-0.2.5/dtwSat/man/twdtwRaster-class.Rd | 24 +- dtwSat-0.2.5/dtwSat/man/twdtwTimeSeries-class.Rd | 9 dtwSat-0.2.5/dtwSat/man/twdtwXtable.Rd | 43 ++- 92 files changed, 977 insertions(+), 651 deletions(-)
Title: Interactive R Unit Tests
Description: Simplifies regression tests by comparing objects produced by test
code with earlier versions of those same objects. If objects are unchanged
the tests pass, otherwise execution stops with error details. If in
interactive mode, tests can be reviewed through the provided interactive
environment.
Author: Brodie Gaslam [aut, cre]
Maintainer: Brodie Gaslam <brodie.gaslam@yahoo.com>
Diff between unitizer versions 1.4.5 dated 2017-11-24 and 1.4.6 dated 2019-01-27
DESCRIPTION | 8 MD5 | 40 ++-- NEWS.md | 7 R/global.R | 2 R/parse.R | 14 - R/unitizer.R | 2 build/vignette.rds |binary inst/doc/u0_unitizer_index.html | 192 +++++++++++++++++++++++ inst/doc/u1_intro.html | 298 +++++++++++++++++++++++++++++++----- inst/doc/u2_tests.Rmd | 2 inst/doc/u2_tests.html | 194 +++++++++++++++++++++++ inst/doc/u3_interactive-env.html | 192 +++++++++++++++++++++++ inst/doc/u4_reproducible-tests.html | 192 +++++++++++++++++++++++ inst/doc/u5_miscellanous.html | 192 +++++++++++++++++++++++ tests/testpkg1.R | 4 tests/testthat/helper/runtt.R | 9 - tests/testthat/testthat.demo.R | 4 tests/testthat/testthat.inpkg.R | 2 tests/testthat/testthat.utz1.R | 6 tests/testthat/testthat.utz2.R | 4 vignettes/u2_tests.Rmd | 2 21 files changed, 1271 insertions(+), 95 deletions(-)
Title: Multi-Species sIZE Spectrum Modelling in R
Description: A set of classes and methods to set up and run multi-species, trait
based and community size spectrum ecological models, focused on the marine
environment.
Author: Finlay Scott [aut, cph],
Julia Blanchard [aut, cph],
Ken Andersen [aut, cph],
Gustav Delius [ctb, cre],
Richard Southwell [ctb]
Maintainer: Gustav Delius <gustav.delius@york.ac.uk>
Diff between mizer versions 1.0 dated 2018-04-30 and 1.0.1 dated 2019-01-27
mizer-1.0.1/mizer/DESCRIPTION | 10 - mizer-1.0.1/mizer/MD5 | 110 +++++++------- mizer-1.0.1/mizer/NAMESPACE | 3 mizer-1.0.1/mizer/NEWS | 5 mizer-1.0.1/mizer/R/MizerParams-class.R | 4 mizer-1.0.1/mizer/R/data.R | 15 + mizer-1.0.1/mizer/R/help.R | 3 mizer-1.0.1/mizer/R/wrapper_functions.R | 25 ++- mizer-1.0.1/mizer/README.md | 10 - mizer-1.0.1/mizer/build/vignette.rds |binary mizer-1.0.1/mizer/inst/doc/mizer_vignette.pdf |binary mizer-1.0.1/mizer/man/MizerParams.Rd | 14 - mizer-1.0.1/mizer/man/MizerSim.Rd | 2 mizer-1.0.1/mizer/man/NS_species_params.Rd | 4 mizer-1.0.1/mizer/man/NS_species_params_gears.Rd | 4 mizer-1.0.1/mizer/man/addSpecies.Rd | 2 mizer-1.0.1/mizer/man/getBiomass.Rd | 2 mizer-1.0.1/mizer/man/getBiomassFrame.Rd | 6 mizer-1.0.1/mizer/man/getCommunitySlope.Rd | 2 mizer-1.0.1/mizer/man/getEGrowth.Rd | 12 - mizer-1.0.1/mizer/man/getEReproAndGrowth.Rd | 8 - mizer-1.0.1/mizer/man/getESpawning.Rd | 10 - mizer-1.0.1/mizer/man/getFMort.Rd | 6 mizer-1.0.1/mizer/man/getFMortGear.Rd | 6 mizer-1.0.1/mizer/man/getFeedingLevel.Rd | 14 - mizer-1.0.1/mizer/man/getM2.Rd | 6 mizer-1.0.1/mizer/man/getM2Background.Rd | 12 - mizer-1.0.1/mizer/man/getMeanMaxWeight.Rd | 5 mizer-1.0.1/mizer/man/getMeanWeight.Rd | 2 mizer-1.0.1/mizer/man/getN.Rd | 2 mizer-1.0.1/mizer/man/getPredRate.Rd | 4 mizer-1.0.1/mizer/man/getProportionOfLargeFish.Rd | 2 mizer-1.0.1/mizer/man/getRDD.Rd | 4 mizer-1.0.1/mizer/man/getRDI.Rd | 4 mizer-1.0.1/mizer/man/getSSB.Rd | 2 mizer-1.0.1/mizer/man/getSSBFrame.Rd | 6 mizer-1.0.1/mizer/man/getYield.Rd | 2 mizer-1.0.1/mizer/man/getYieldGear.Rd | 2 mizer-1.0.1/mizer/man/getZ.Rd | 8 - mizer-1.0.1/mizer/man/inter.Rd | 4 mizer-1.0.1/mizer/man/mizer.Rd | 1 mizer-1.0.1/mizer/man/plotBiomass.Rd | 8 - mizer-1.0.1/mizer/man/plotFMort.Rd | 5 mizer-1.0.1/mizer/man/plotFeedingLevel.Rd | 5 mizer-1.0.1/mizer/man/plotGrowthCurves.Rd | 8 - mizer-1.0.1/mizer/man/plotM2.Rd | 5 mizer-1.0.1/mizer/man/plotSpectra.Rd | 4 mizer-1.0.1/mizer/man/plotYield.Rd | 4 mizer-1.0.1/mizer/man/plotYieldGear.Rd | 2 mizer-1.0.1/mizer/man/project.Rd | 12 - mizer-1.0.1/mizer/man/setBackground.Rd | 4 mizer-1.0.1/mizer/man/set_community_model.Rd | 10 - mizer-1.0.1/mizer/man/set_scaling_model.Rd | 15 + mizer-1.0.1/mizer/man/set_trait_model.Rd | 13 - mizer-1.0.1/mizer/tests/testthat/Rplots.pdf |only mizer-1.0.1/mizer/tests/testthat/test-wrapper_functions.R | 3 mizer-1.0/mizer/vignettes/mizer_vignette-concordance.tex |only 57 files changed, 175 insertions(+), 266 deletions(-)
Title: Working with Files from 'LexisNexis'
Description: My PhD supervisor once told me that everyone doing newspaper
analysis starts by writing code to read in files from the 'LexisNexis' newspaper
archive (retrieved e.g., from <http://www.nexis.com/> or any of the partner
sites). However, while this is a nice exercise I do recommend, not everyone has
the time. This package takes TXT files downloaded from the newspaper archive of
'LexisNexis', reads them into R and offers functions for further processing.
Author: Johannes Gruber [aut, cre]
Maintainer: Johannes Gruber <j.gruber.1@research.gla.ac.uk>
Diff between LexisNexisTools versions 0.2.1 dated 2019-01-21 and 0.2.2 dated 2019-01-27
DESCRIPTION | 10 +- MD5 | 35 +++++----- NAMESPACE | 3 NEWS.md |only R/LexisNexisTools.R | 121 +++++++++++++++++++---------------- README.md | 26 +++---- build/vignette.rds |binary inst/CITATION | 2 inst/doc/demo.Rmd | 2 inst/doc/demo.html | 40 +++++------ tests/files/tidytext.RDS |binary tests/testthat/test-lnt_convert.R | 5 - tests/testthat/test-lnt_diff.R | 14 ++-- tests/testthat/test-lnt_lookup.R | 6 - tests/testthat/test-lnt_read.R | 8 +- tests/testthat/test-lnt_rename.R | 6 + tests/testthat/test-lnt_similarity.R | 7 -- tests/testthat/test-methods.R | 7 +- vignettes/demo.Rmd | 2 19 files changed, 159 insertions(+), 135 deletions(-)
More information about LexisNexisTools at CRAN
Permanent link
Title: Toolbox for Model Building and Forecasting
Description: Implements functions and instruments for regression model building and its
application to forecasting. The main scope of the package is in variables selection
and models specification for cases of time series data. This includes promotional
modelling, selection between different dynamic regressions with non-standard
distributions of errors, selection based on cross validation, solutions to the fat
regression model problem and more. Models developed in the package are tailored
specifically for forecasting purposes. So as a results there are several methods
that allow producing forecasts from these models and visualising them.
Author: Ivan Svetunkov [aut, cre] (Lecturer at Centre for Marketing Analytics
and Forecasting, Lancaster University, UK)
Maintainer: Ivan Svetunkov <ivan@svetunkov.ru>
Diff between greybox versions 0.4.0 dated 2019-01-04 and 0.4.1 dated 2019-01-27
DESCRIPTION | 8 MD5 | 78 ++-- NEWS | 19 R/alm.R | 47 ++ R/association.R | 55 +- R/cramer.R | 50 ++ R/determination.R | 54 +- R/lmCombine.R | 348 +++++++++++++----- R/lmDynamic.R | 378 +++++++++++++++---- R/mcor.R | 74 +++ R/methods.R | 33 - R/ro.R | 32 - R/spread.R | 2 R/stepwise.R | 147 +++++-- R/xregExpander.R | 4 README.md | 4 build/partial.rdb |binary build/vignette.rds |binary inst/doc/alm.R | 52 ++ inst/doc/alm.Rmd | 77 +++ inst/doc/alm.html | 828 ++++++++++++++++++++++++++++--------------- inst/doc/greybox.R | 5 inst/doc/greybox.Rmd | 54 ++ inst/doc/greybox.html | 816 ++++++++++++++++++++++++++++-------------- inst/doc/maUsingGreybox.R |only inst/doc/maUsingGreybox.Rmd |only inst/doc/maUsingGreybox.html |only inst/doc/ro.R | 5 inst/doc/ro.Rmd | 5 inst/doc/ro.html | 438 +++++++++++++++++----- man/association.Rd | 15 man/cramer.Rd | 6 man/determination.Rd | 12 man/lmCombine.Rd | 22 - man/lmDynamic.Rd | 20 - man/mcor.Rd | 6 man/ro.Rd | 7 man/spread.Rd | 2 vignettes/alm.Rmd | 77 +++ vignettes/greybox.Rmd | 54 ++ vignettes/maUsingGreybox.Rmd |only vignettes/ro.Rmd | 5 42 files changed, 2765 insertions(+), 1074 deletions(-)
Title: Data Set for the 'benchmarkme' Package
Description: Crowd sourced benchmarks from running the 'benchmarkme' package.
Author: Colin Gillespie [aut, cre]
Maintainer: Colin Gillespie <csgillespie@gmail.com>
Diff between benchmarkmeData versions 0.5.1 dated 2017-08-29 and 1.0.0 dated 2019-01-27
DESCRIPTION | 12 +-- MD5 | 38 +++++---- NAMESPACE | 1 NEWS.md | 4 + R/data_help_files.R | 8 ++ R/datatable.R | 41 ++++------ R/make_data_set.R | 48 ++++-------- R/move_files.R | 5 - R/plot_past.R | 29 ++----- R/select_results.R | 61 ++++++--------- data/past_results.RData |binary data/past_results_v2.RData |only inst/shinyapps_io/dashboard.Rmd | 134 +++++++++++++++++++---------------- inst/shinyapps_io/functions.R | 9 +- man/get_datatable_past.Rd | 11 -- man/move_files.Rd | 2 man/past_results_v2.Rd |only man/plot_past.Rd | 15 --- man/select_results.Rd | 14 +-- tests/testthat/test-datatable_past.R | 10 +- tests/testthat/test-plot_past.R | 4 - 21 files changed, 212 insertions(+), 234 deletions(-)
More information about benchmarkmeData at CRAN
Permanent link
Title: Spatial Data Download and Utility Functions
Description: A suite of conversion scripts to create internally standardized
spatial polygons data frames. Utility scripts use these data sets to return
values such as country, state, timezone, watershed, etc. associated with a
set of longitude/latitude pairs. (They also make cool maps.)
Author: Jonathan Callahan [aut, cre],
Tom Bergamaschi [aut],
Ruby Fore [aut],
Will Leahy [aut],
Helen Miller [aut],
Henry Nguyen [aut],
Robin Winstanley [aut],
Alice Yang [aut]
Maintainer: Jonathan Callahan <jonathan.s.callahan@gmail.com>
Diff between MazamaSpatialUtils versions 0.5.4 dated 2018-09-18 and 0.6.0 dated 2019-01-27
MazamaSpatialUtils-0.5.4/MazamaSpatialUtils/R/convertISOCodeTable.R |only MazamaSpatialUtils-0.5.4/MazamaSpatialUtils/inst/doc/introduction.R |only MazamaSpatialUtils-0.5.4/MazamaSpatialUtils/inst/doc/introduction.Rmd |only MazamaSpatialUtils-0.5.4/MazamaSpatialUtils/inst/doc/introduction.html |only MazamaSpatialUtils-0.5.4/MazamaSpatialUtils/man/convertISOCodeTable.Rd |only MazamaSpatialUtils-0.5.4/MazamaSpatialUtils/tests/testthat/test1.R |only MazamaSpatialUtils-0.5.4/MazamaSpatialUtils/vignettes/introduction.Rmd |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/DESCRIPTION | 22 - MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/MD5 | 141 +++++--- MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/NAMESPACE | 14 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/NEWS.md |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/MazamaSpatialUtils.R | 171 ++++++++-- MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertCARBAirBasins.R |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertEEZCountries.R | 24 - MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertGACC.R |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertHMSSmoke.R | 8 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertIndianLands.R | 6 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertLayer.R | 20 - MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertNWSFireZones.R |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertNaturalEarthAdm1.R | 6 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertOSMTimezones.R | 4 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertPHDs.R |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertSimpleCountries.R | 6 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertSimpleCountriesEEZ.R | 7 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertSimpleTimezones.R | 4 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertStateLegislativeDistricts.R |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertTMWorldBorders.R | 6 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertTMWorldBordersSimple.R | 6 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertTerrestrialEcoregions.R | 4 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertUSCensusCBSA.R | 28 - MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertUSCensusCongress.R | 50 +- MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertUSCensusCounties.R | 51 +- MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertUSCensusStates.R | 6 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertWBDHUC.R | 51 +- MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertWeatherZones.R |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertWorldEEZ.R | 6 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/convertWorldTimezones.R | 4 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/getHUC.R | 11 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/getHUCName.R | 2 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/getPolygonID.R | 2 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/getSpatialData.R | 54 +-- MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/getVariable.R | 8 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/runExample.R |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/R/summarizeByPolygon.R | 20 - MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/README.md | 159 +++++++-- MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/build/vignette.rds |binary MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/data/US_stateCodes.RData |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/data/datalist | 1 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/demo/findCountries.R | 4 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/inst/doc/MazamaSpatialUtils.R |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/inst/doc/MazamaSpatialUtils.Rmd |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/inst/doc/MazamaSpatialUtils.html |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/inst/shiny_examples |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/man/CONUS.Rd |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/man/SimpleTimezones.Rd | 3 MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/man/US_52.Rd |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/man/US_stateCodes.Rd |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/man/convertCARBAirBasins.Rd |only MazamaSpatialUtils-0.6.0/MazamaSpatialUtils/man/convertEEZCountries.Rd | 18 - 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More information about MazamaSpatialUtils at CRAN
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Title: Calculates Demographic Indicators
Description: Calculates key indicators such as fertility rates (Total Fertility Rate (TFR), General Fertility Rate (GFR),
and Age Specific Fertility Rate (ASFR)) using Demographic and Health Survey (DHS) women/individual data,
and childhood mortality probabilities and rates such as Neonatal Mortality Rate (NNMR), Post-neonatal Mortality Rate (PNNMR),
Infant Mortality Rate (IMR), Child Mortality Rate (CMR), and Under-five Mortality Rate (U5MR).
In addition to the indicators, the 'DHS.rates' package estimates sampling errors indicators such as Standard Error (SE),
Design Effect (DEFT), Relative Standard Error (RSE) and Confidence Interval (CI).
The package is developed according to the DHS methodology of calculating the fertility indicators and
the childhood mortality rates outlined in the
"Guide to DHS Statistics" (Croft, Trevor N., Aileen M. J. Marshall, Courtney K. Allen, et al. 2018, <https://dhsprogram.com/Data/Guide-to-DHS-Statistics/index.cfm>)
and the DHS methodology of estimating the sampling errors indicators outlined in
the "DHS Sampling and Household Listing Manual" (ICF International 2012, <https://dhsprogram.com/pubs/pdf/DHSM4/DHS6_Sampling_Manual_Sept2012_DHSM4.pdf>).
Author: Mahmoud Elkasabi
Maintainer: Mahmoud Elkasabi <mahmoud.elkasabi@icf.com>
Diff between DHS.rates versions 0.5.0 dated 2019-01-12 and 0.6.0 dated 2019-01-27
DESCRIPTION | 12 ++++----- MD5 | 24 +++++++++--------- NAMESPACE | 1 R/CHMORT5.R | 64 ++++++++++++++++++++++++++++++++++++++++++++++-- R/chmort.R | 30 +++++++++++----------- R/chmortp.R |only R/fert.R | 32 ++++++++++++------------ inst/doc/DHS.rates.R | 6 ++++ inst/doc/DHS.rates.Rmd | 24 ++++++++++++++++++ inst/doc/DHS.rates.html | 41 +++++++++++++++++++++++++++++- man/chmort.Rd | 30 +++++++++++----------- man/chmortp.Rd |only man/fert.Rd | 32 ++++++++++++------------ vignettes/DHS.rates.Rmd | 24 ++++++++++++++++++ 14 files changed, 237 insertions(+), 83 deletions(-)
Title: Commodore Amiga File Format Handler
Description: Modern software often poorly support older file formats. This
package intends to handle many file formats that were native to the
antiquated Commodore Amiga machine. This package focuses on file types from
the older Amiga operating systems (<= 3.0). It will read and write specific
file formats and coerces them into more contemporary data.
Author: Pepijn de Vries [aut, cre, dtc]
Maintainer: Pepijn de Vries <pepijn.devries@outlook.com>
Diff between AmigaFFH versions 0.1.2 dated 2018-03-14 and 0.2.0 dated 2019-01-27
DESCRIPTION | 12 - MD5 | 91 ++++++++------ NAMESPACE | 34 ++++- NEWS | 29 ++++ R/AmigaFFH.r | 14 +- R/adfExplorer.clone.r |only R/data.r | 37 +++++ R/generic_support.r | 269 ++++++++++++++++++++++++++++++++++-------- R/hardwareSprites.r | 107 +++++++++++++++- R/iff.0.r | 173 +++++++++++++++++---------- R/iff.8svx.r | 20 +-- R/iff.ilbm.r | 91 +++++++------- R/imports.r | 2 R/sysdata.rda |only R/system_configuration.r |only R/workbench_icon.r |only data/amiga_palettes.rda |only man/AmigaFFH.Rd | 14 +- man/AmigaIcon.Rd |only man/IFFChunk-class.Rd | 6 man/IFFChunk.Rd | 14 +- man/SysConfig.Rd |only man/WaveToIFF.Rd | 8 - man/amiga_display_modes.Rd | 2 man/amiga_monitors.Rd | 2 man/amiga_palettes.Rd |only man/as.raster.Rd | 31 +++- man/as.raw.Rd | 24 +++ man/bitmapToRaster.Rd | 7 - man/colourToAmigaRaw.Rd | 5 man/deltaFibonacciCompress.Rd | 12 - man/dither.Rd | 5 man/getIFFChunk.Rd | 6 man/hardwareSprite-class.Rd | 2 man/ilbm8lores.iff.Rd | 4 man/index.colours.Rd | 5 man/interpretIFFChunk.Rd | 4 man/packBitmap.Rd | 5 man/play.Rd | 2 man/plot.Rd | 21 ++- man/rasterToBitmap.Rd | 5 man/rasterToHWSprite.Rd |only man/rasterToIFF.Rd | 11 + man/rawToAmigaIcon.Rd |only man/rawToHWSprite.Rd | 8 + man/rawToIFFChunk.Rd |only man/rawToSysConfig.Rd |only man/read.AmigaIcon.Rd |only man/read.SysConfig.Rd |only man/read.iff.Rd | 8 - man/simpleAmigaIcon.Rd |only man/simpleSysConfig.Rd |only man/timeval.Rd |only man/write.AmigaIcon.Rd |only man/write.SysConfig.Rd |only man/write.iff.Rd | 8 - 56 files changed, 803 insertions(+), 295 deletions(-)
Title: A Statistically Sound 'data.frame' Processor/Conditioner
Description: A 'data.frame' processor/conditioner that prepares real-world data for predictive modeling in a statistically sound manner.
'vtreat' prepares variables so that data has fewer exceptional cases, making
it easier to safely use models in production. Common problems 'vtreat' defends
against: 'Inf', 'NA', too many categorical levels, rare categorical levels, and new
categorical levels (levels seen during application, but not during training). Reference:
"'vtreat': a data.frame Processor for Predictive Modeling", 'Zumel', 'Mount', 2016, DOI:10.5281/zenodo.1173314.
Author: John Mount [aut, cre],
Nina Zumel [aut],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between vtreat versions 1.3.4 dated 2019-01-02 and 1.3.5 dated 2019-01-27
DESCRIPTION | 10 MD5 | 68 +-- NAMESPACE | 4 NEWS.md | 9 R/effectTreatmentC.R | 3 R/patch_in_frame.R |only R/segmented_variable.R | 32 + R/spline_variable.R | 36 + R/square_window.R | 31 + R/utils.R | 14 R/variable_importance.R | 14 R/vtreat.R | 11 README.md | 43 +- inst/doc/MultiClassVtreat.html | 26 - inst/doc/SavingTreamentPlans.html | 4 inst/doc/VariableImportance.html | 743 +++++++++++++++++++++++++++++++++++++- inst/doc/vtreat.html | 117 ++--- inst/doc/vtreatCrossFrames.html | 38 - inst/doc/vtreatGrouping.html | 4 inst/doc/vtreatOverfit.html | 38 - inst/doc/vtreatRareLevels.html | 4 inst/doc/vtreatScaleMode.html | 16 inst/doc/vtreatSignificance.html | 18 inst/doc/vtreatSplitting.html | 4 inst/doc/vtreatVariableTypes.html | 42 +- man/designTreatmentsC.Rd | 2 man/mkCrossFrameCExperiment.Rd | 2 man/patch_in_frame.Rd |only man/solve_piecewise.Rd | 2 man/solve_piecewisec.Rd |only man/spline_variable.Rd | 2 man/spline_variablec.Rd |only man/square_window.Rd | 2 man/square_windowc.Rd |only man/value_variables_C.Rd | 8 man/value_variables_N.Rd | 6 tests/testthat/testW1.R | 2 tests/testthat/test_col_dups.R |only 38 files changed, 1081 insertions(+), 274 deletions(-)
Title: Multiscale Change-Point Inference
Description: Allows fitting of step-functions to univariate serial data where neither the number of jumps nor their positions is known by implementing the multiscale regression estimators SMUCE (K. Frick, A. Munk and H. Sieling, 2014) <doi:10.1111/rssb.12047> and HSMUCE (F. Pein, H. Sieling and A. Munk, 2017) <doi:10.1111/rssb.12202>. In addition, confidence intervals for the change-point locations and bands for the unknown signal can be obtained.
Author: Pein Florian [aut, cre],
Thomas Hotz [aut],
Hannes Sieling [aut],
Timo Aspelmeier [ctb]
Maintainer: Pein Florian <fpein@uni-goettingen.de>
Diff between stepR versions 2.0-2 dated 2018-04-06 and 2.0-3 dated 2019-01-27
ChangeLog | 11 ++++++++++- DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ R/critVal.R | 3 ++- R/smuceR.R | 6 ++++-- build/vignette.rds |binary inst/doc/StepR.pdf |binary 7 files changed, 26 insertions(+), 14 deletions(-)
Title: Regression Modeling Strategies
Description: Regression modeling, testing, estimation, validation,
graphics, prediction, and typesetting by storing enhanced model design
attributes in the fit. 'rms' is a collection of functions that
assist with and streamline modeling. It also contains functions for
binary and ordinal logistic regression models, ordinal models for
continuous Y with a variety of distribution families, and the Buckley-James
multiple regression model for right-censored responses, and implements
penalized maximum likelihood estimation for logistic and ordinary
linear models. 'rms' works with almost any regression model, but it
was especially written to work with binary or ordinal regression
models, Cox regression, accelerated failure time models,
ordinary linear models, the Buckley-James model, generalized least
squares for serially or spatially correlated observations, generalized
linear models, and quantile regression.
Author: Frank E Harrell Jr <f.harrell@vanderbilt.edu>
Maintainer: Frank E Harrell Jr <f.harrell@vanderbilt.edu>
Diff between rms versions 5.1-2 dated 2018-01-07 and 5.1-3 dated 2019-01-27
DESCRIPTION | 10 +++--- MD5 | 47 ++++++++++++++++------------- NAMESPACE | 2 - NEWS | 17 ++++++++++ R/calibrate.default.s | 15 ++++++--- R/contrast.s | 4 +- R/lrm.s | 5 ++- R/orm.fit.s | 76 +++++++++++++++++++++++++----------------------- R/orm.s | 2 - R/plotp.Predict.s | 2 - R/predab.resample.s | 3 + R/predictrms.s | 1 R/rms.s | 24 ++++++++++----- R/rmsMisc.s | 4 +- R/summary.rms.s | 7 +--- R/survplotp.npsurv.s | 9 +++-- inst/tests/calibrate.r |only inst/tests/cph4.r | 2 - inst/tests/examples.Rmd | 26 +++++++--------- inst/tests/lrm2.r |only inst/tests/offset.r | 22 +++++++++++-- inst/tests/orm-Mean.r |only inst/tests/orm-simult.r |only inst/tests/orm5.r |only man/calibrate.Rd | 3 + man/nomogram.Rd | 2 - man/plotp.Predict.Rd | 3 - 27 files changed, 171 insertions(+), 115 deletions(-)
Title: Functions for Computing Wavelet Filters, Wavelet Transforms and
Multiresolution Analyses
Description: Contains functions for computing and plotting
discrete wavelet transforms (DWT) and maximal overlap discrete
wavelet transforms (MODWT), as well as their inverses.
Additionally, it contains functionality for computing and
plotting wavelet transform filters that are used in the above
decompositions as well as multiresolution analyses.
Author: Eric Aldrich <ealdrich@gmail.com>
Maintainer: Eric Aldrich <ealdrich@gmail.com>
Diff between wavelets versions 0.3-0 dated 2013-12-18 and 0.3-0.1 dated 2019-01-27
DESCRIPTION | 14 +++++++------- MD5 | 12 ++++++------ NAMESPACE | 13 +++++++++++++ data/ecg.RData |binary data/nile.RData |binary data/ocean.RData |binary data/subtidal.RData |binary 7 files changed, 26 insertions(+), 13 deletions(-)
Title: Succinct and Correct Statistical Summaries for Reports
Description: Succinctly and correctly format statistical summaries of
various models and tests (F-test, Chi-Sq-test, Fisher-test, T-test, and rank-significance). The main purpose is unified reporting
of experimental results, working around issue such as the difficulty of
extracting model summary facts (such as with 'lm'/'glm'). This package also
includes empirical tests, such as bootstrap estimates.
Author: John Mount [aut, cre],
Nina Zumel [aut],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between sigr versions 1.0.3 dated 2018-11-04 and 1.0.4 dated 2019-01-27
DESCRIPTION | 12 ++++++------ MD5 | 30 +++++++++++++++--------------- NEWS.md | 4 ++++ R/AUCTest.R | 6 +++--- R/BinomTest.R | 4 ++-- R/ChiSqTest.R | 12 +++++++----- R/fns.R | 12 +++++++++--- inst/doc/lmExample.html | 4 ++-- inst/doc/sigrFormatting.html | 4 ++-- man/calcAUC.Rd | 10 +++++++--- man/permTestAUC.Rd | 2 +- man/resampleTestAUC.Rd | 5 +++-- man/testAUCpair.Rd | 2 +- man/wrapBinomTest.data.frame.Rd | 4 ++-- man/wrapBinomTest.numeric.Rd | 2 +- man/wrapChiSqTest.data.frame.Rd | 10 ++++++---- 16 files changed, 71 insertions(+), 52 deletions(-)
Title: Functional Programming Tools
Description: A complete and consistent functional programming toolkit for R.
Author: Lionel Henry [aut, cre],
Hadley Wickham [aut],
RStudio [cph, fnd]
Maintainer: Lionel Henry <lionel@rstudio.com>
Diff between purrr versions 0.2.5 dated 2018-05-29 and 0.3.0 dated 2019-01-27
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Title: Various R Programming Tools for Plotting Data
Description: Various R programming tools for plotting data, including:
- calculating and plotting locally smoothed summary function as
('bandplot', 'wapply'),
- enhanced versions of standard plots ('barplot2', 'boxplot2',
'heatmap.2', 'smartlegend'),
- manipulating colors ('col2hex', 'colorpanel', 'redgreen',
'greenred', 'bluered', 'redblue', 'rich.colors'),
- calculating and plotting two-dimensional data summaries ('ci2d',
'hist2d'),
- enhanced regression diagnostic plots ('lmplot2', 'residplot'),
- formula-enabled interface to 'stats::lowess' function ('lowess'),
- displaying textual data in plots ('textplot', 'sinkplot'),
- plotting a matrix where each cell contains a dot whose size
reflects the relative magnitude of the elements ('balloonplot'),
- plotting "Venn" diagrams ('venn'),
- displaying Open-Office style plots ('ooplot'),
- plotting multiple data on same region, with separate axes
('overplot'),
- plotting means and confidence intervals ('plotCI', 'plotmeans'),
- spacing points in an x-y plot so they don't overlap ('space').
Author: Gregory R. Warnes, Ben Bolker, Lodewijk Bonebakker, Robert
Gentleman, Wolfgang Huber Andy Liaw, Thomas Lumley, Martin
Maechler, Arni Magnusson, Steffen Moeller, Marc Schwartz, Bill
Venables
Maintainer: Gregory R. Warnes <greg@warnes.net>
Diff between gplots versions 3.0.1 dated 2016-03-30 and 3.0.1.1 dated 2019-01-27
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- NAMESPACE | 4 +--- R/heatmap.2.R | 4 ++-- R/plotCI.R | 2 +- data/rtPCR.rda |binary 6 files changed, 12 insertions(+), 14 deletions(-)
Title: Fish Migration Monitoring
Description: Graphical outputs and treatment for a database of fish pass
monitoring. It is a part of the 'STACOMI' open source project developed in
France by the French Agency for Biodiversity (AFB) institute to centralize
data obtained by fish pass monitoring. This version is available in French and
English. See <http://stacomir.r-forge.r-project.org/> for more information on
'STACOMI'.
Author: Cedric Briand [aut, cre],
Marion Legrand [aut],
Timothee Besse [aut]
Maintainer: Cedric Briand <cedric.briand00@gmail.com>
Diff between stacomiR versions 0.5.4.0 dated 2018-10-11 and 0.5.4.1 dated 2019-01-27
.Rinstignore | 7 ++++-- DESCRIPTION | 12 +++++----- MD5 | 18 ++++++++-------- R/report_mig_char.R | 2 - build/partial.rdb |binary build/vignette.rds |binary inst/cran-comments/cran-comments-v0.5.4.0.md | 8 ------- inst/doc/stacomir.Rmd | 2 - inst/doc/stacomir.html | 30 +++++++++++++++++++++++---- man/figures/README-rmmstd-1.png |binary vignettes/stacomir.Rmd | 2 - 11 files changed, 50 insertions(+), 31 deletions(-)
Title: Deep Learning with Metaheuristic
Description: Fits from simple regression to highly customizable deep neural networks
either with gradient descent or metaheuristic, using automatic hyper parameters
tuning and custom cost function.
A mix inspired by the common tricks on Deep Learning and Particle Swarm Optimization.
Author: Alex Boulangé [aut, cre]
Maintainer: Alex Boulangé <aboul@free.fr>
Diff between automl versions 1.2.6 dated 2018-12-08 and 1.2.7 dated 2019-01-27
DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ NEWS | 5 +++++ R/automl.R | 8 ++++++++ build/vignette.rds |binary inst/doc/howto_automl.pdf |binary vignettes/automl.Rmd | 2 +- 7 files changed, 23 insertions(+), 10 deletions(-)
Title: gWidgets API for Building Toolkit-Independent, Interactive GUIs
Description: Provides a toolkit-independent API for building interactive GUIs. At least one of the 'gWidgetsXXX packages', such as gWidgetstcltk, needs to be installed. Some icons are on loan from the scigraphica project <http://scigraphica.sourceforge.net>.
Author: John Verzani. Based on the iwidgets code of Simon Urbanek and suggestions by Simon Urbanek, Philippe Grosjean and Michael Lawrence
Maintainer: John Verzani <jverzani@gmail.com>
Diff between gWidgets versions 0.0-54 dated 2014-08-27 and 0.0-54.1 dated 2019-01-27
DESCRIPTION | 10 +++++----- MD5 | 4 ++-- NAMESPACE | 8 ++++++++ 3 files changed, 15 insertions(+), 7 deletions(-)
Title: Swarm Intelligence for Self-Organized Clustering
Description: Algorithms implementing populations of agents that interact with one another and sense their environment may exhibit emergent behavior such as self-organization and swarm intelligence. Here, a swarm system called databionic swarm (DBS) is introduced. DBS is able to adapt itself to structures of high-dimensional data such as natural clusters characterized by distance and/or density based structures in the data space. The first module is the parameter-free projection method called Pswarm (Pswarm()), which exploits the concepts of self-organization and emergence, game theory, swarm intelligence and symmetry considerations. The second module is the parameter-free high-dimensional data visualization technique, which generates projected points on the topographic map with hypsometric tints defined by the generalized U-matrix (GeneratePswarmVisualization()). The third module is the clustering method itself with non-critical parameters (DBSclustering()). Clustering can be verified by the visualization and vice versa. The term DBS refers to the method as a whole. It enables even a non-professional in the field of data mining to apply its algorithms for visualization and/or clustering to data sets with completely different structures drawn from diverse research fields. The package is based on the book of Thrun, M.C.: "Projection Based Clustering through Self-Organization and Swarm Intelligence" (2018) <DOI:10.1007/978-3-658-20540-9>. A comparison to 26 common clustering algorithms on 15 datasets is presented on the website.
Author: Michael Thrun [aut, cre, cph]
Maintainer: Michael Thrun <m.thrun@gmx.net>
Diff between DatabionicSwarm versions 1.1.0 dated 2018-07-03 and 1.1.1 dated 2019-01-27
DESCRIPTION | 16 ++--- MD5 | 32 +++++------ R/GeneratePswarmVisualization.R | 2 R/RcppExports.R | 54 +++++++++--------- R/RelativeDifference.R | 8 ++ R/RobustNormalization.R | 50 ++++++++++++++--- build/partial.rdb |binary build/vignette.rds |binary inst/NEWS | 7 +- inst/doc/DatabionicSwarm.R | 2 inst/doc/DatabionicSwarm.Rmd | 5 + inst/doc/DatabionicSwarm.html | 115 ++++++++++++++++++++++++++++++++++------ man/DatabionicSwarm-package.Rd | 6 +- man/RelativeDifference.Rd | 7 +- man/RobustNormalization.Rd | 36 +++++++++++- src/RcppExports.cpp | 28 ++++----- vignettes/DatabionicSwarm.Rmd | 5 + 17 files changed, 266 insertions(+), 107 deletions(-)
More information about DatabionicSwarm at CRAN
Permanent link
Title: Credible Visualization for Two-Dimensional Projections of Data
Description: Projections are common dimensionality reduction methods, which represent high-dimensional data in a two-dimensional space. However, when restricting the output space to two dimensions, which results in a two dimensional scatter plot (projection) of the data, low dimensional similarities do not represent high dimensional distances coercively [Thrun, 2018]. This could lead to a misleading interpretation of the underlying structures [Thrun, 2018]. By means of the 3D topographic map the generalized Umatrix is able to depict errors of these two-dimensional scatter plots. The package is based on the book of Thrun, M.C.: "Projection Based Clustering through Self-Organization and Swarm Intelligence" (2018) <DOI:10.1007/978-3-658-20540-9>.
Author: Michael Thrun [aut, cre, cph],
Alfred Ultsch [ths]
Maintainer: Michael Thrun <m.thrun@gmx.net>
Diff between GeneralizedUmatrix versions 1.1.2 dated 2018-07-03 and 1.1.4 dated 2019-01-27
DESCRIPTION | 9 +-- MD5 | 34 ++++++----- NAMESPACE | 2 R/GeneralizedUmatrix.R | 2 R/GeneratePmatrix.R |only R/RcppExports.R | 8 +- R/plotTopographicMap.R | 98 +++++++++++++++++++++++++++------ build/partial.rdb |binary build/vignette.rds |binary inst/CITATION | 2 inst/doc/GeneralizedUmatrix.R | 5 + inst/doc/GeneralizedUmatrix.Rmd | 9 +-- inst/doc/GeneralizedUmatrix.html | 111 +++++++++++++++++++++++++++++++++----- man/GeneralizedUmatrix-package.Rd | 14 +--- man/GeneralizedUmatrix.Rd | 8 +- man/GeneratePmatrix.Rd |only man/plotTopographicMap.Rd | 29 +++++++-- src/RcppExports.cpp | 26 ++++---- vignettes/GeneralizedUmatrix.Rmd | 9 +-- 19 files changed, 265 insertions(+), 101 deletions(-)
More information about GeneralizedUmatrix at CRAN
Permanent link
Title: Degrees of Freedom of Elastic Net, Adaptive Lasso and
Generalized Elastic Net
Description: Computes the degrees of freedom of the lasso,
elastic net, generalized elastic net and adaptive lasso based
on the generalized path seeking algorithm. The optimal model
can be selected by model selection criteria including Mallows'
Cp, bias-corrected AIC (AICc), generalized cross validation
(GCV) and BIC.
Author: Kei Hirose
Maintainer: Kei Hirose <mail@keihirose.com>
Diff between msgps versions 1.3 dated 2012-05-17 and 1.3.1 dated 2019-01-27
DESCRIPTION | 16 +++++++++------- MD5 | 4 ++-- NAMESPACE | 5 ++++- 3 files changed, 15 insertions(+), 10 deletions(-)
Title: Sample Design, Drawing & Data Analysis Using Data Frames
Description: Determine sample sizes, draw samples, and conduct data analysis using data frames. It specifically enables you to determine simple random sample sizes, stratified sample sizes, and complex stratified sample sizes using a secondary variable such as population; draw simple random samples and stratified random samples from sampling data frames; determine which observations are missing from a random sample, missing by strata, duplicated within a dataset; and perform data analysis, including proportions, margins of error and upper and lower bounds for simple, stratified and cluster sample designs.
Author: Michael Baldassaro
Maintainer: Michael Baldassaro <mbaldassaro@gmail.com>
Diff between sampler versions 0.2.2 dated 2018-07-20 and 0.2.3 dated 2019-01-27
DESCRIPTION | 6 +++--- MD5 | 6 +++--- R/ssampcalc.R | 2 +- README.md | 3 ++- 4 files changed, 9 insertions(+), 8 deletions(-)
Title: Common Plots for Analysis
Description: Select data analysis plots, under a standardized calling interface implemented on top of 'ggplot2' and 'plotly'.
Plots of interest include: 'ROC', gain curve, scatter plot with marginal distributions,
conditioned scatter plot with marginal densities,
box and stem with matching theoretical distribution, and density with matching theoretical distribution.
Author: John Mount [aut, cre],
Nina Zumel [aut],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between WVPlots versions 1.0.7 dated 2018-12-17 and 1.0.8 dated 2019-01-27
DESCRIPTION | 12 ++++++------ MD5 | 28 ++++++++++++++-------------- NEWS.md | 5 +++++ R/DoubleDensity.R | 20 +++++++++++++++----- R/GainCurve.R | 12 +++++++++--- R/LiftCurve.R | 11 +++++++++-- R/ScatterHist.R | 4 ++-- inst/doc/WVPlots_concept.Rmd | 2 +- inst/doc/WVPlots_concept.html | 6 +++--- inst/doc/WVPlots_examples.html | 4 ++-- man/DoubleDensityPlot.Rd | 4 +++- man/GainCurvePlot.Rd | 6 ++++-- man/LiftCurvePlot.Rd | 4 +++- man/ScatterHist.Rd | 4 ++-- vignettes/WVPlots_concept.Rmd | 2 +- 15 files changed, 79 insertions(+), 45 deletions(-)
Title: Hierarchical Bayesian ANOVA Models
Description: It covers several Bayesian Analysis of Variance (BANOVA) models used in analysis of experimental designs in which both within- and between- subjects factors are manipulated. They can be applied to data that are common in the behavioral and social sciences. The package includes: Hierarchical Bayes ANOVA models with normal response, t response, Binomial (Bernoulli) response, Poisson response, ordered multinomial response and multinomial response variables. All models accommodate unobserved heterogeneity by including a normal distribution of the parameters across individuals. Outputs of the package include tables of sums of squares, effect sizes and p-values, and tables of predictions, which are easily interpretable for behavioral and social researchers. The floodlight analysis and mediation analysis based on these models are also provided. BANOVA uses 'Stan' and 'JAGS' as the computational platform.
Author: Chen Dong, Michel Wedel
Maintainer: Chen Dong <cdong@math.umd.edu>
Diff between BANOVA versions 1.1.1 dated 2018-01-22 and 1.1.2 dated 2019-01-27
DESCRIPTION | 8 MD5 | 56 ++- NAMESPACE | 2 NEWS | 7 R/BANOVA.mediation.R | 507 ++++++++++++++++++++++++++--------- R/BANOVA.run.R | 63 ++-- R/cal.flood.effects.R | 44 +-- R/cal.mediation.effects.R | 12 R/cal.mediation.effects.individual.R |only R/design.matrix.R | 7 R/effect.matrix.factor.R | 5 R/effect.matrix.interaction.R | 12 R/effect.matrix.mediator.R | 13 R/floodlight.analysis.R | 32 +- R/multi.design.matrix.R | 12 R/multi.effect.matrix.factor.R | 5 R/multi.effect.matrix.interaction.R | 5 R/multi.print.table.means.R | 26 - R/print.BANOVA.mediation.R | 15 - R/print.table.means.R | 40 +- R/table.ANCOVA.R | 30 +- R/table.predictions.R | 18 - R/util.R |only build/vignette.rds |binary inst/doc/banova_examples.html | 28 + man/BANOVA-package.Rd | 4 man/BANOVA.mediation.Rd | 7 man/BANOVA.run.Rd | 7 man/colorad.Rd | 30 +- src/install.libs.R | 6 30 files changed, 698 insertions(+), 303 deletions(-)