Title: Reconstruct Animal Tracks from Magnetometer, Accelerometer,
Depth and Optional Speed Data
Description: Reconstructs animal tracks from magnetometer, accelerometer, depth and optional speed data. Designed primarily using data from Wildlife Computers Daily Diary tags deployed on northern fur seals.
Author: Brian Battaile
Maintainer: Brian Battaile <brian.battaile@gmail.com>
Diff between TrackReconstruction versions 1.1 dated 2014-04-03 and 1.2 dated 2019-07-15
DESCRIPTION | 12 - MD5 | 70 ++++---- NAMESPACE | 5 R/DeadReckoning.R | 4 build/vignette.rds |binary data/datalist | 28 +-- inst/doc/TrackReconstruction.R | 319 ++++++++++++++++++------------------- inst/doc/TrackReconstruction.Snw | 155 +++++++---------- inst/doc/TrackReconstruction.pdf |binary man/CalcBearing.Rd | 6 man/CalcDistance.Rd | 4 man/CalcLatitude.Rd | 4 man/CalcLongitude.Rd | 4 man/DeadReckoning.Rd | 212 ++++++++++++------------ man/GPStable.Rd | 10 - man/GapFinder.Rd | 18 -- man/GeoRef.Rd | 12 - man/GeoReference.Rd | 12 - man/GraphLimits.Rd | 4 man/Mapper.Rd | 8 man/Splitter.Rd | 35 +--- man/Standardize.Rd | 12 - man/TrackReconstruction-package.Rd | 206 +++++++++++------------ man/bathymetry.Rd | 27 --- man/georef1min01.Rd | 4 man/georef1min02.Rd | 4 man/georef1min03.Rd | 4 man/georef1min26.Rd | 4 man/georef1min95.Rd | 4 man/gpsdata01.Rd | 2 man/gpsdata02.Rd | 2 man/gpsdata03.Rd | 2 man/gpsdata26.Rd | 2 man/gpsdata95.Rd | 2 man/square.Rd | 2 vignettes/TrackReconstruction.Snw | 155 +++++++---------- 36 files changed, 635 insertions(+), 719 deletions(-)
More information about TrackReconstruction at CRAN
Permanent link
Title: Statistical Methods for Regional Counts
Description: Implements statistical methods for analyzing the counts of areal data,
with a focus on the detection of spatial clusters and clustering. The package has a heavy emphasis on spatial scan methods, first introduced by Kulldorff and Nagarwalla (1995) <doi:10.1002/sim.4780140809> and Kulldorff (1997) <doi:10.1080/03610929708831995>.
Author: Joshua French
Maintainer: Joshua French <joshua.french@ucdenver.edu>
Diff between smerc versions 1.0 dated 2019-07-14 and 1.0.1 dated 2019-07-15
DESCRIPTION | 8 +- MD5 | 8 +- NEWS | 5 + R/flex.test.R | 190 ++++++++++++++++++++++++++++--------------------------- man/flex.test.Rd | 6 + 5 files changed, 116 insertions(+), 101 deletions(-)
Title: Simulation of Ecological (and Other) Dynamic Systems
Description: An object oriented framework to simulate
ecological (and other) dynamic systems. It can be used for
differential equations, individual-based (or agent-based) and other
models as well. It supports structuring of simulation scenarios (to avoid copy
and paste) and aims to improve readability and re-usability of code.
Author: Thomas Petzoldt [aut, cre] (<https://orcid.org/0000-0002-4951-6468>)
Maintainer: Thomas Petzoldt <thomas.petzoldt@tu-dresden.de>
Diff between simecol versions 0.8-12 dated 2018-06-03 and 0.8-13 dated 2019-07-15
DESCRIPTION | 12 MD5 | 20 build/partial.rdb |binary build/vignette.rds |binary inst/NEWS | 12 inst/doc/a-simecol-introduction.R | 622 +++++++++++----------- inst/doc/a-simecol-introduction.pdf |binary inst/doc/b-simecol-howtos.R | 986 ++++++++++++++++++------------------ inst/doc/b-simecol-howtos.pdf |binary man/parms.Rd | 2 man/simecol-package.Rd | 26 11 files changed, 835 insertions(+), 845 deletions(-)
Title: Interactive Functions to be Used as Shortcuts in 'RStudio'
Description: 'RStudio' as of recently offers the option to define addins and assign shortcuts to them. This package contains addins for a few most frequently used functions in a data scientist's (at least mine) daily work (like str(), example(), plot(), head(), view(), Desc()). Most of these functions will use the current selection in the editor window and send the specific command to the console while instantly executing it. Assigning shortcuts to these addins will save you quite a few keystrokes.
Author: Andri Signorell
Maintainer: Andri Signorell <andri@signorell.net>
Diff between DescToolsAddIns versions 1.2 dated 2019-05-07 and 1.3 dated 2019-07-15
DESCRIPTION | 13 +- MD5 | 30 +++++- NAMESPACE | 30 +++++- NEWS | 15 +++ R/AddIns.R | 141 +++++++++++++++++++++--------- R/Dialogs.R |only README.md |only inst/CITATION |only inst/extdata |only inst/rstudio/addins.dcf | 216 ++++++++++++++++++++++++----------------------- man/ColPicker.Rd |only man/ColorDlg.Rd |only man/DescToolsAddIns.Rd | 79 +++++++++-------- man/FileImportDlg.Rd |only man/FileOpenDlg.Rd |only man/ModelDlg.Rd |only man/PlotPch.Rd |only man/SelectVarDlg.Rd |only man/Xplore.Rd |only man/dir.choose.Rd |only man/figures/ModelDlg.png |only 21 files changed, 326 insertions(+), 198 deletions(-)
More information about DescToolsAddIns at CRAN
Permanent link
Title: Examples of Recursive Lists and Nested or Split Data Frames
Description: Recursive lists in the form of R objects, 'JSON',
and 'XML', for use in teaching and examples. Examples include color
palettes, Game of Thrones characters, 'GitHub' users and repositories,
music collections, and entities from the Star Wars universe. Data from
the 'gapminder' package is also included, as a simple data frame and
in nested and split forms.
Author: Jennifer Bryan [aut, cre] (<https://orcid.org/0000-0002-6983-2759>),
Charlotte Wickham [ctb]
Maintainer: Jennifer Bryan <jenny@rstudio.com>
Diff between repurrrsive versions 0.1.0 dated 2017-09-08 and 1.0.0 dated 2019-07-15
DESCRIPTION | 46 +- MD5 | 54 +-- NAMESPACE | 1 NEWS.md |only R/discog.R |only R/gapminder.R | 8 R/gh_users_repos.R | 4 R/got_chars.R | 6 R/repurrrsive-package.r | 2 R/swapi.R | 18 - R/wesanderson.R | 6 README.md | 569 +++++++++++++++++++---------------- data/discog.rda |only inst/extdata/discog.json |only man/discog.Rd |only man/discog_json.Rd |only man/gh_repos.Rd | 7 man/gh_users.Rd | 5 man/gh_users_json.Rd | 1 man/got_chars.Rd | 7 man/got_chars_json.Rd | 1 man/repurrrsive-package.Rd | 16 man/sw_people.Rd | 14 man/wesanderson.Rd | 5 man/wesanderson_json.Rd | 1 tests/testthat.R | 1 tests/testthat/reference/discog.rds |only tests/testthat/test-discog.R |only tests/testthat/test-gh_users_repos.R | 26 - tests/testthat/test-got_chars.R | 14 tests/testthat/test-swapi.R | 20 - tests/testthat/test-wesanderson.R | 11 32 files changed, 469 insertions(+), 374 deletions(-)
Title: IRT Models for Polytomous and Continuous Item Responses
Description: Estimates the multidimensional polytomous Rasch model (Rasch, 1961) with conditional maximum likelihood estimation.
Author: Christine Hohensinn [cre,aut]
Maintainer: Christine Hohensinn <research@christinehohensinn.at>
Diff between pcIRT versions 0.2.3 dated 2018-04-30 and 0.2.4 dated 2019-07-15
pcIRT-0.2.3/pcIRT/src/init.c |only pcIRT-0.2.4/pcIRT/DESCRIPTION | 13 ++---- pcIRT-0.2.4/pcIRT/MD5 | 67 ++++++++++++++++----------------- pcIRT-0.2.4/pcIRT/NAMESPACE | 6 -- pcIRT-0.2.4/pcIRT/R/CRSM.R | 52 ++++++++++++++++++------- pcIRT-0.2.4/pcIRT/R/DRM.R | 1 pcIRT-0.2.4/pcIRT/R/LRT.R | 1 pcIRT-0.2.4/pcIRT/R/MPRM.R | 3 - pcIRT-0.2.4/pcIRT/R/RcppExports.R | 2 pcIRT-0.2.4/pcIRT/R/dLRT.R | 1 pcIRT-0.2.4/pcIRT/R/gmc.R | 10 ---- pcIRT-0.2.4/pcIRT/R/iccplot.CRSM.R | 1 pcIRT-0.2.4/pcIRT/R/iccplot.R | 9 ---- pcIRT-0.2.4/pcIRT/R/pcIRT-package.R | 4 - pcIRT-0.2.4/pcIRT/R/person_par.CRSM.R | 5 +- pcIRT-0.2.4/pcIRT/R/person_par.R | 10 ---- pcIRT-0.2.4/pcIRT/R/print.CRSM.R | 1 pcIRT-0.2.4/pcIRT/R/simCRSM.R | 23 +---------- pcIRT-0.2.4/pcIRT/R/simDRM.R | 1 pcIRT-0.2.4/pcIRT/R/simMPRM.R | 1 pcIRT-0.2.4/pcIRT/R/summary.CRSM.R | 2 pcIRT-0.2.4/pcIRT/man/crsm.Rd | 21 +--------- pcIRT-0.2.4/pcIRT/man/dLR.Rd | 5 -- pcIRT-0.2.4/pcIRT/man/drm.Rd | 4 - pcIRT-0.2.4/pcIRT/man/gmc.Rd | 17 -------- pcIRT-0.2.4/pcIRT/man/iccplot.Rd | 18 -------- pcIRT-0.2.4/pcIRT/man/lrt.Rd | 8 --- pcIRT-0.2.4/pcIRT/man/mprm.Rd | 8 --- pcIRT-0.2.4/pcIRT/man/pcIRT-package.Rd | 4 - pcIRT-0.2.4/pcIRT/man/perspar.Rd | 15 ------- pcIRT-0.2.4/pcIRT/man/simCRSM.Rd | 24 ----------- pcIRT-0.2.4/pcIRT/man/simDRM.Rd | 3 - pcIRT-0.2.4/pcIRT/man/simMPRM.Rd | 5 -- pcIRT-0.2.4/pcIRT/man/wt.Rd | 2 pcIRT-0.2.4/pcIRT/src/RcppExports.cpp | 12 +++++ 35 files changed, 101 insertions(+), 258 deletions(-)
Title: Color Palettes for Pro Sports Teams
Description: Provides color palettes corresponding to professional and amateur,
sports teams. These can be useful in creating data graphics that are themed
for particular teams.
Author: Benjamin S. Baumer [aut, cre],
Gregory J. Matthews [aut],
Luke Benz [ctb]
Maintainer: Benjamin S. Baumer <ben.baumer@gmail.com>
Diff between teamcolors versions 0.0.1 dated 2017-10-01 and 0.0.2 dated 2019-07-15
DESCRIPTION | 32 ++++++++++++++++++-------------- MD5 | 18 ++++++++++++------ NAMESPACE | 9 +++++++++ NEWS.md | 11 +++++++++++ R/data.R | 4 +++- R/palettes.R |only data/teamcolors.rda |binary inst |only man/figures |only man/league_pal.Rd |only man/teamcolors.Rd | 4 +++- tests |only 12 files changed, 56 insertions(+), 22 deletions(-)
Title: Interface to Drosophila Activity Monitor System Result Files
Description: Loads behavioural data from the widely used Drosophila Activity Monitor System (DAMS, TriKinetics <https://trikinetics.com/>) into the rethomics framework.
Author: Quentin Geissmann [aut, cre],
Hadley Wickham [aut]
Maintainer: Quentin Geissmann <qgeissmann@gmail.com>
Diff between damr versions 0.3.3 dated 2019-04-08 and 0.3.4 dated 2019-07-15
DESCRIPTION | 10 +++++----- MD5 | 6 +++--- R/parse-datetime.R | 2 +- README.md | 2 +- 4 files changed, 10 insertions(+), 10 deletions(-)
Title: Analysis of Simulation Studies Including Monte Carlo Error
Description: Summarise results from simulation studies and compute Monte Carlo
standard errors of commonly used summary statistics. This package is modelled
on the 'simsum' user-written command in 'Stata' (See White I.R., 2010
<http://www.stata-journal.com/article.html?article=st0200>).
Author: Alessandro Gasparini [aut, cre]
(<https://orcid.org/0000-0002-8319-7624>),
Ian R. White [aut]
Maintainer: Alessandro Gasparini <ag475@leicester.ac.uk>
Diff between rsimsum versions 0.5.2 dated 2019-04-25 and 0.6.0 dated 2019-07-15
rsimsum-0.5.2/rsimsum/inst/doc/introduction.R |only rsimsum-0.5.2/rsimsum/inst/doc/introduction.Rmd |only rsimsum-0.5.2/rsimsum/inst/doc/introduction.html |only rsimsum-0.5.2/rsimsum/inst/doc/plotting.R |only rsimsum-0.5.2/rsimsum/inst/doc/plotting.Rmd |only rsimsum-0.5.2/rsimsum/inst/doc/plotting.html |only rsimsum-0.5.2/rsimsum/inst/doc/relhaz.R |only rsimsum-0.5.2/rsimsum/inst/doc/relhaz.Rmd |only rsimsum-0.5.2/rsimsum/inst/doc/relhaz.html |only rsimsum-0.5.2/rsimsum/inst/doc/rsimsumtidyverse.R |only rsimsum-0.5.2/rsimsum/inst/doc/rsimsumtidyverse.Rmd |only rsimsum-0.5.2/rsimsum/inst/doc/rsimsumtidyverse.html |only rsimsum-0.5.2/rsimsum/vignettes/introduction.Rmd |only rsimsum-0.5.2/rsimsum/vignettes/plotting.Rmd |only rsimsum-0.5.2/rsimsum/vignettes/relhaz.Rmd |only rsimsum-0.5.2/rsimsum/vignettes/rsimsumtidyverse.Rmd |only rsimsum-0.6.0/rsimsum/DESCRIPTION | 8 - rsimsum-0.6.0/rsimsum/MD5 | 93 +++++++------- rsimsum-0.6.0/rsimsum/NAMESPACE | 1 rsimsum-0.6.0/rsimsum/NEWS.md | 18 ++ rsimsum-0.6.0/rsimsum/R/autoplot.multisimsum.R | 9 - rsimsum-0.6.0/rsimsum/R/autoplot.simsum.R | 29 +++- rsimsum-0.6.0/rsimsum/R/autoplot.summary.multisimsum.R | 6 rsimsum-0.6.0/rsimsum/R/autoplot.summary.simsum.R | 6 rsimsum-0.6.0/rsimsum/R/data.R | 21 +++ rsimsum-0.6.0/rsimsum/R/dropbig.R | 4 rsimsum-0.6.0/rsimsum/R/get_data.R | 4 rsimsum-0.6.0/rsimsum/R/nsim.R | 2 rsimsum-0.6.0/rsimsum/R/plot-types.R | 91 ++++++++++--- rsimsum-0.6.0/rsimsum/R/print.summary.multisimsum.R | 6 rsimsum-0.6.0/rsimsum/R/print.summary.simsum.R | 6 rsimsum-0.6.0/rsimsum/R/rsimsum-package.R | 4 rsimsum-0.6.0/rsimsum/README.md | 29 +++- rsimsum-0.6.0/rsimsum/build/partial.rdb |binary rsimsum-0.6.0/rsimsum/build/vignette.rds |binary rsimsum-0.6.0/rsimsum/data/nlp.rda |only rsimsum-0.6.0/rsimsum/inst/doc/A-introduction.R |only rsimsum-0.6.0/rsimsum/inst/doc/A-introduction.Rmd |only rsimsum-0.6.0/rsimsum/inst/doc/A-introduction.html |only rsimsum-0.6.0/rsimsum/inst/doc/B-relhaz.R |only rsimsum-0.6.0/rsimsum/inst/doc/B-relhaz.Rmd |only rsimsum-0.6.0/rsimsum/inst/doc/B-relhaz.html |only rsimsum-0.6.0/rsimsum/inst/doc/C-plotting.R |only rsimsum-0.6.0/rsimsum/inst/doc/C-plotting.Rmd |only rsimsum-0.6.0/rsimsum/inst/doc/C-plotting.html |only rsimsum-0.6.0/rsimsum/inst/doc/D-nlp.R |only rsimsum-0.6.0/rsimsum/inst/doc/D-nlp.Rmd |only rsimsum-0.6.0/rsimsum/inst/doc/D-nlp.html |only rsimsum-0.6.0/rsimsum/inst/doc/E-rsimsumtidyverse.R |only rsimsum-0.6.0/rsimsum/inst/doc/E-rsimsumtidyverse.Rmd |only rsimsum-0.6.0/rsimsum/inst/doc/E-rsimsumtidyverse.html |only rsimsum-0.6.0/rsimsum/man/autoplot.multisimsum.Rd | 6 rsimsum-0.6.0/rsimsum/man/autoplot.simsum.Rd | 14 +- rsimsum-0.6.0/rsimsum/man/autoplot.summary.multisimsum.Rd | 6 rsimsum-0.6.0/rsimsum/man/autoplot.summary.simsum.Rd | 6 rsimsum-0.6.0/rsimsum/man/figures/README-ba-1.png |binary rsimsum-0.6.0/rsimsum/man/figures/README-lolly-1.png |binary rsimsum-0.6.0/rsimsum/man/figures/README-nlp-1.png |only rsimsum-0.6.0/rsimsum/man/figures/README-ridgeline-1.png |binary rsimsum-0.6.0/rsimsum/man/figures/README-zipper-1.png |binary rsimsum-0.6.0/rsimsum/man/nlp.Rd |only rsimsum-0.6.0/rsimsum/tests/testthat/test-autoplot.R | 33 ++++ rsimsum-0.6.0/rsimsum/vignettes/A-introduction.Rmd |only rsimsum-0.6.0/rsimsum/vignettes/B-relhaz.Rmd |only rsimsum-0.6.0/rsimsum/vignettes/C-plotting.Rmd |only rsimsum-0.6.0/rsimsum/vignettes/D-nlp.Rmd |only rsimsum-0.6.0/rsimsum/vignettes/E-rsimsumtidyverse.Rmd |only 67 files changed, 291 insertions(+), 111 deletions(-)
Title: Get Data for Brazilian Bonds (Tesouro Direto)
Description: Downloads and aggregates data for Brazilian government issued bonds directly from the website of Tesouro Direto <http://www.tesouro.fazenda.gov.br/tesouro-direto-balanco-e-estatisticas>.
Author: Marcelo Perlin [aut, cre]
Maintainer: Marcelo Perlin <marceloperlin@gmail.com>
Diff between GetTDData versions 1.4 dated 2019-04-02 and 1.4.1 dated 2019-07-15
DESCRIPTION | 8 MD5 | 20 - NEWS.md | 3 R/gtdd_get_yield_curve.R | 13 + build/vignette.rds |binary inst/doc/gtdd-vignette_GetTDData.html | 374 +++++++++++++++++++++++++-------- inst/doc/gtdd-vignette_YieldCurve.R | 34 +-- inst/doc/gtdd-vignette_YieldCurve.Rmd | 8 inst/doc/gtdd-vignette_YieldCurve.html | 325 +++++++++++++++++++++++----- man/get.yield.curve.Rd | 2 vignettes/gtdd-vignette_YieldCurve.Rmd | 8 11 files changed, 615 insertions(+), 180 deletions(-)
Title: Interface to 'Container Instances', 'Docker Registry' and
'Kubernetes' in 'Azure'
Description: An interface to container functionality in Microsoft's 'Azure' cloud: <https://azure.microsoft.com/en-us/overview/containers/>. Manage 'Azure Container Instance' (ACI), 'Azure Container Registry' (ACR) and 'Azure Kubernetes Service' (AKS) resources, push and pull images, and deploy services. On the client side, lightweight shells to the 'docker', 'kubectl' and 'helm' commandline tools are provided. Part of the 'AzureR' family of packages.
Author: Hong Ooi [aut, cre],
Bill Liang [ctb] (Assistance debugging MMLS on Kubernetes),
Ramkumar Chandrasekaran [ctb] (Original blog article on Dockerising
MMLS),
Microsoft [cph]
Maintainer: Hong Ooi <hongooi@microsoft.com>
Diff between AzureContainers versions 1.0.2 dated 2019-05-04 and 1.1.0 dated 2019-07-15
AzureContainers-1.0.2/AzureContainers/inst/doc/vig01_plumber_deploy.R |only AzureContainers-1.0.2/AzureContainers/inst/doc/vig02_mmls_deploy.R |only AzureContainers-1.1.0/AzureContainers/DESCRIPTION | 15 AzureContainers-1.1.0/AzureContainers/MD5 | 93 +- AzureContainers-1.1.0/AzureContainers/NAMESPACE | 2 AzureContainers-1.1.0/AzureContainers/NEWS.md | 15 AzureContainers-1.1.0/AzureContainers/R/AzureContainers.R | 2 AzureContainers-1.1.0/AzureContainers/R/add_aci_methods.R | 33 AzureContainers-1.1.0/AzureContainers/R/add_acr_methods.R | 13 AzureContainers-1.1.0/AzureContainers/R/add_aks_methods.R | 24 AzureContainers-1.1.0/AzureContainers/R/add_vmsize_methods.R | 3 AzureContainers-1.1.0/AzureContainers/R/az_container_instance.R | 24 AzureContainers-1.1.0/AzureContainers/R/az_container_registry.R | 48 + AzureContainers-1.1.0/AzureContainers/R/az_kubernetes_service.R | 54 + AzureContainers-1.1.0/AzureContainers/R/docker_registry.R | 334 +++++++--- AzureContainers-1.1.0/AzureContainers/R/graph_login.R |only AzureContainers-1.1.0/AzureContainers/R/is.R | 4 AzureContainers-1.1.0/AzureContainers/R/kubernetes_cluster.R | 53 + AzureContainers-1.1.0/AzureContainers/README.md | 25 AzureContainers-1.1.0/AzureContainers/build/vignette.rds |binary AzureContainers-1.1.0/AzureContainers/inst/doc/vig01_plumber_deploy.Rmd | 47 - AzureContainers-1.1.0/AzureContainers/inst/doc/vig01_plumber_deploy.html | 155 ++-- AzureContainers-1.1.0/AzureContainers/inst/doc/vig02_mmls_deploy.Rmd | 25 AzureContainers-1.1.0/AzureContainers/inst/doc/vig02_mmls_deploy.html | 255 +++---- AzureContainers-1.1.0/AzureContainers/inst/doc/vig03_rbac.Rmd |only AzureContainers-1.1.0/AzureContainers/inst/doc/vig03_rbac.html |only AzureContainers-1.1.0/AzureContainers/man/DockerRegistry.Rd |only AzureContainers-1.1.0/AzureContainers/man/KubernetesCluster.Rd |only AzureContainers-1.1.0/AzureContainers/man/aci.Rd | 4 AzureContainers-1.1.0/AzureContainers/man/aci_utils.Rd | 7 AzureContainers-1.1.0/AzureContainers/man/acr.Rd | 19 AzureContainers-1.1.0/AzureContainers/man/aks.Rd | 30 AzureContainers-1.1.0/AzureContainers/man/create_aci.Rd | 12 AzureContainers-1.1.0/AzureContainers/man/create_acr.Rd | 7 AzureContainers-1.1.0/AzureContainers/man/create_aks.Rd | 7 AzureContainers-1.1.0/AzureContainers/man/delete_aci.Rd | 3 AzureContainers-1.1.0/AzureContainers/man/delete_acr.Rd | 3 AzureContainers-1.1.0/AzureContainers/man/delete_aks.Rd | 3 AzureContainers-1.1.0/AzureContainers/man/docker_registry.Rd | 92 +- AzureContainers-1.1.0/AzureContainers/man/get_aci.Rd | 3 AzureContainers-1.1.0/AzureContainers/man/get_acr.Rd | 3 AzureContainers-1.1.0/AzureContainers/man/get_aks.Rd | 3 AzureContainers-1.1.0/AzureContainers/man/kubernetes_cluster.Rd | 110 --- AzureContainers-1.1.0/AzureContainers/man/list_kubernetes_versions.Rd | 3 AzureContainers-1.1.0/AzureContainers/man/list_vm_sizes.Rd | 3 AzureContainers-1.1.0/AzureContainers/tests/testthat/test01_acr.R | 38 - AzureContainers-1.1.0/AzureContainers/tests/testthat/test02_aci.R | 12 AzureContainers-1.1.0/AzureContainers/tests/testthat/test03_aks.R | 39 - AzureContainers-1.1.0/AzureContainers/vignettes/perms2.png |only AzureContainers-1.1.0/AzureContainers/vignettes/vig01_plumber_deploy.Rmd | 47 - AzureContainers-1.1.0/AzureContainers/vignettes/vig02_mmls_deploy.Rmd | 25 AzureContainers-1.1.0/AzureContainers/vignettes/vig03_rbac.Rmd |only 52 files changed, 985 insertions(+), 712 deletions(-)
More information about AzureContainers at CRAN
Permanent link
Title: Interface to 'Tushare Pro' API
Description: Helps the R users to get data from 'Tushare Pro'<https://tushare.pro>.
'Tushare Pro' is a platform as well as a community with a lot of staffs working in financial area.
We support financial data such as stock price, financial report statements and digital coins data.
Author: Feifei ZHANG
Maintainer: Feifei ZHANG<tushare_pro@163.com>
Diff between Tushare versions 0.1.1 dated 2018-11-02 and 0.1.2 dated 2019-07-15
DESCRIPTION | 6 - MD5 | 6 - R/Tushare.R | 276 ++++++++++++++++++++++++++---------------------------- build/partial.rdb |binary 4 files changed, 143 insertions(+), 145 deletions(-)
Title: Run Predictions Inside the Database
Description: It parses a fitted 'R' model object, and returns a formula
in 'Tidy Eval' code that calculates the predictions.
It works with several databases back-ends because it leverages 'dplyr'
and 'dbplyr' for the final 'SQL' translation of the algorithm. It currently
supports lm(), glm(), randomForest(), ranger(), earth(), xgb.Booster.complete(),
cubist(), and ctree() models.
Author: Edgar Ruiz [aut, cre]
Maintainer: Edgar Ruiz <edgar@rstudio.com>
Diff between tidypredict versions 0.4.1 dated 2019-07-14 and 0.4.2 dated 2019-07-15
DESCRIPTION | 6 +++--- MD5 | 16 ++++++++-------- NAMESPACE | 1 + NEWS.md | 6 +++++- R/model-xgboost.R | 2 +- R/predict-fit.R | 5 +++++ inst/doc/xgboost.html | 4 ++-- tests/testthat.R | 9 --------- tests/testthat/test-ranger.R | 15 ++++++--------- 9 files changed, 31 insertions(+), 33 deletions(-)
Title: Sparse Truncated Singular Value Decomposition (from 'SVDLIBC')
Description: Wrapper around the 'SVDLIBC' library for (truncated) singular value decomposition of a sparse matrix.
Currently, only sparse real matrices in Matrix package format are supported.
Author: Doug Rohde [aut],
Michael Berry [aut],
Theresa Do [aut],
Gavin O'Brien [aut],
Vijay Krishna [aut],
Sowmini Varadhan [aut],
University of Tennessee Research Foundation [cph] (files src/las2.c,
src/svdlib.[ch], src/svdutil.[ch]),
Stefan Evert [cre, aut, cph] (copyright holder for files src/main.c,
R/*, man/*, tests/*)
Maintainer: Stefan Evert <stefan.evert@fau.de>
Diff between sparsesvd versions 0.1-4 dated 2018-02-15 and 0.2 dated 2019-07-15
DESCRIPTION | 8 +- MD5 | 13 +-- NEWS | 5 + src/las2.c | 156 ++++++++++++++++++++++++++++++++++-------- src/svdutil.c | 24 ++++-- src/svdutil.h | 2 tests/iris.R | 8 +- tests/loss_of_orthogonality.R |only 8 files changed, 168 insertions(+), 48 deletions(-)
Title: GRadient-Based RECognition of Spatial Patterns in Environmental
Data
Description: Provides algorithms for detection of spatial patterns from oceanographic data using image processing methods based on Gradient Recognition.
Author: Wencheng Lau-Medrano [aut, cre]
Maintainer: Wencheng Lau-Medrano <luis.laum@gmail.com>
Diff between grec versions 1.2.2 dated 2018-09-12 and 1.3.0 dated 2019-07-15
grec-1.2.2/grec/data/NW_USA_SST.RData |only grec-1.2.2/grec/data/bathy.RData |only grec-1.2.2/grec/man/NW_USA_SST.Rd |only grec-1.2.2/grec/man/bathy.Rd |only grec-1.3.0/grec/DESCRIPTION | 12 +-- grec-1.3.0/grec/MD5 | 30 +++---- grec-1.3.0/grec/NEWS.md | 2 grec-1.3.0/grec/R/Raster-class.R | 2 grec-1.3.0/grec/R/grec-internal.R | 135 ++++++++++++++-------------------- grec-1.3.0/grec/R/grec-main.R | 129 ++++++++++++++++++-------------- grec-1.3.0/grec/data/datalist | 2 grec-1.3.0/grec/demo/00Index | 2 grec-1.3.0/grec/demo/detectFronts.R | 36 +++++---- grec-1.3.0/grec/man/chl.Rd | 6 + grec-1.3.0/grec/man/colPalette.Rd | 2 grec-1.3.0/grec/man/detectFronts.Rd | 95 +++++++++++++++-------- grec-1.3.0/grec/man/grec-package.Rd | 9 +- grec-1.3.0/grec/man/sst.Rd | 3 18 files changed, 251 insertions(+), 214 deletions(-)
Title: Bayesian "Now-Cast" Estimation of Event Probabilities in
Multi-Party Democracies
Description: An implementation of a Bayesian framework for the opinion poll
based estimation of event probabilities in multi-party electoral systems
(Bender and Bauer (2018) <doi:10.21105/joss.00606>).
Author: Andreas Bender [aut, cre] (<https://orcid.org/0000-0001-5628-8611>),
Alexander Bauer [aut] (<https://orcid.org/0000-0003-3495-5131>)
Maintainer: Andreas Bender <bender.at.R@gmail.com>
Diff between coalitions versions 0.6.5 dated 2018-10-06 and 0.6.10 dated 2019-07-15
DESCRIPTION | 31 +-- MD5 | 44 +++-- NAMESPACE | 10 + NEWS.md | 29 +-- R/data.R | 11 + R/draw-from-posterior.R | 3 R/plot_survey.R |only R/pooling.R | 4 R/scrapers.R | 118 ++++++++++---- R/zzz.R | 2 README.md | 51 ++---- build/vignette.rds |binary data/party_labels_de.rda |only inst/CITATION | 10 + inst/doc/diagnostic.html | 121 +++++++++------ inst/doc/pooling.html | 75 ++++++--- inst/doc/workflow.html | 327 ++++++++++++++++++++++------------------- man/draw_from_posterior.Rd | 2 man/get_surveys.Rd | 13 + man/gg_survey.Rd |only man/party_colors_de.Rd | 2 man/party_labels_de.Rd |only man/scrape.Rd | 2 man/scrape_austria.Rd | 8 - tests/testthat/test-scrapers.R | 13 + 25 files changed, 525 insertions(+), 351 deletions(-)
Title: Replication Timing Profiling using DNA Copy Number
Description: Create, Plot and Compare Replication Timing Profiles. The method is described in Muller et al., (2014) <doi: 10.1093/nar/gkt878>.
Author: Dzmitry G Batrakou
Maintainer: Dzmitry G Batrakou <d.batrakou@gmail.com>
Diff between Repliscope versions 1.0.1 dated 2019-05-30 and 1.1.0 dated 2019-07-15
Repliscope-1.0.1/Repliscope/R/MFA.R |only Repliscope-1.0.1/Repliscope/R/smothRatio.R |only Repliscope-1.0.1/Repliscope/data/MFA.RData |only Repliscope-1.0.1/Repliscope/man/MFA.Rd |only Repliscope-1.1.0/Repliscope/DESCRIPTION | 6 - Repliscope-1.1.0/Repliscope/MD5 | 59 ++++++++++--------- Repliscope-1.1.0/Repliscope/NAMESPACE | 3 Repliscope-1.1.0/Repliscope/NEWS.md | 6 + Repliscope-1.1.0/Repliscope/R/MFAseq.R |only Repliscope-1.1.0/Repliscope/R/TrepDF.R |only Repliscope-1.1.0/Repliscope/R/W303_S.R | 2 Repliscope-1.1.0/Repliscope/R/W303norm.R | 2 Repliscope-1.1.0/Repliscope/R/calcTrep.R |only Repliscope-1.1.0/Repliscope/R/makeGenome.R | 5 + Repliscope-1.1.0/Repliscope/R/plotBed.R | 2 Repliscope-1.1.0/Repliscope/R/plotCoverage.R | 2 Repliscope-1.1.0/Repliscope/R/plotGenome.R | 2 Repliscope-1.1.0/Repliscope/R/plotTrep.R |only Repliscope-1.1.0/Repliscope/R/smoothRatio.R |only Repliscope-1.1.0/Repliscope/README.md | 2 Repliscope-1.1.0/Repliscope/build/vignette.rds |binary Repliscope-1.1.0/Repliscope/data/MFAseq.RData |only Repliscope-1.1.0/Repliscope/data/TrepDF.RData |only Repliscope-1.1.0/Repliscope/inst/doc/Repliscope.Rmd | 2 Repliscope-1.1.0/Repliscope/inst/doc/Repliscope.html | 2 Repliscope-1.1.0/Repliscope/inst/shinyApp/server.R | 2 Repliscope-1.1.0/Repliscope/inst/shinyApp/ui.R | 4 - Repliscope-1.1.0/Repliscope/man/MFAseq.Rd |only Repliscope-1.1.0/Repliscope/man/TrepDF.Rd |only Repliscope-1.1.0/Repliscope/man/W303_S.Rd | 2 Repliscope-1.1.0/Repliscope/man/W303norm.Rd | 2 Repliscope-1.1.0/Repliscope/man/calcTrep.Rd |only Repliscope-1.1.0/Repliscope/man/plotBed.Rd | 4 - Repliscope-1.1.0/Repliscope/man/plotCoverage.Rd | 4 - Repliscope-1.1.0/Repliscope/man/plotGenome.Rd | 2 Repliscope-1.1.0/Repliscope/man/plotTrep.Rd |only Repliscope-1.1.0/Repliscope/man/smoothRatio.Rd | 6 - Repliscope-1.1.0/Repliscope/vignettes/Repliscope.Rmd | 2 38 files changed, 70 insertions(+), 53 deletions(-)
Title: R Implementation of Leiden Clustering Algorithm
Description: Implements the 'Python leidenalg' module to be called in R.
Enables clustering using the leiden algorithm for partition a graph into communities.
See the 'Python' repository for more details: <https://github.com/vtraag/leidenalg>
Traag et al (2018) From Louvain to Leiden: guaranteeing well-connected communities. <arXiv:1810.08473>.
Author: S. Thomas Kelly [aut, cre, trl],
Vincent A. Traag [com]
Maintainer: S. Thomas Kelly <tom.kelly@riken.jp>
Diff between leiden versions 0.2.3 dated 2019-02-11 and 0.3.0 dated 2019-07-15
DESCRIPTION | 25 ++-- LICENSE |only MD5 | 39 ++++--- NAMESPACE | 11 + NEWS.md | 29 +++-- R/find_partition.R |only R/leiden.R | 232 ++++++++++++++++++++++++++++++++++-------- build/vignette.rds |binary inst/CITATION | 6 - inst/WORDLIST | 2 inst/doc/benchmarking.R |only inst/doc/benchmarking.Rmd |only inst/doc/benchmarking.html |only inst/doc/run_igraph.R |only inst/doc/run_igraph.Rmd |only inst/doc/run_igraph.html |only inst/doc/run_leiden.R | 73 +++++++------ inst/doc/run_leiden.Rmd | 46 +++++--- inst/doc/run_leiden.html | 82 ++++++++------ man/leiden.Rd | 33 +++++ tests/testthat/test_igraph.R |only tests/testthat/test_leiden.R | 2 tests/testthat/test_methods.R |only vignettes/benchmarking.Rmd |only vignettes/python3 |only vignettes/run_igraph.Rmd |only vignettes/run_leiden.Rmd | 46 +++++--- 27 files changed, 444 insertions(+), 182 deletions(-)
Title: IMAGing engINE, Tools for Application of Image Filters to Data
Matrices
Description: Provides fast application of image filters to data matrices,
using R and C++ algorithms.
Author: Wencheng Lau-Medrano [aut, cre]
Maintainer: Wencheng Lau-Medrano <luis.laum@gmail.com>
Diff between imagine versions 1.4.0 dated 2018-05-06 and 1.5.2 dated 2019-07-15
DESCRIPTION | 11 MD5 | 32 +- R/RcppExports.R | 16 - R/imagine-internal.R | 213 ++++++++++----- R/imagine-main.R | 161 +++++++---- build/vignette.rds |binary inst/doc/vignette.R | 48 --- inst/doc/vignette.Rmd | 66 ---- inst/doc/vignette.html | 129 +++++---- man/basic2DFilter.Rd | 33 +- man/contextualMF.Rd | 31 +- man/convolutions.Rd | 32 +- man/image-package.Rd | 4 man/wbImage.Rd | 4 src/RcppExports.cpp | 39 +- src/engines.cpp | 689 +++++++++++++++++++++++++++++++++++++------------ vignettes/vignette.Rmd | 66 ---- 17 files changed, 982 insertions(+), 592 deletions(-)
Title: Get EC2 Instance Metadata
Description: Retrieve Amazon EC2 instance metadata from within the running instance.
Author: Thomas J. Leeper [aut] (<https://orcid.org/0000-0003-4097-6326>),
Jonathan Stott [cre, aut]
Maintainer: Jonathan Stott <jonathan.stott@magairports.com>
Diff between aws.ec2metadata versions 0.1.6 dated 2019-04-24 and 0.2.0 dated 2019-07-15
DESCRIPTION | 8 +++--- MD5 | 10 ++++---- NEWS.md | 7 ++++- R/aws.ec2metadata-package.R | 55 ++++++++++++++++++++++++++++++++++---------- README.md | 2 - man/ec2metadata.Rd | 2 + 6 files changed, 61 insertions(+), 23 deletions(-)
More information about aws.ec2metadata at CRAN
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Title: Support Points
Description: The 'support' package provides the functions sp() and sp_seq() for computing the support points in Mak and Joseph (2018) <DOI:10.1214/17-AOS1629>. Support points can be used as a representative sample of a desired distribution, or a representative reduction of a big dataset (e.g., an "optimal" thinning of Markov-chain Monte Carlo sample chains). This work was supported by USARO grant W911NF-14-1-0024 and NSF DMS grant 1712642.
Author: Simon Mak
Maintainer: Simon Mak <sm769@duke.edu>
Diff between support versions 0.1.3 dated 2019-05-23 and 0.1.4 dated 2019-07-15
DESCRIPTION | 13 ++++++------- MD5 | 22 +++++++++++----------- R/criteria.R | 21 +++++++++++---------- R/extensible_fns.R | 24 +++++++++++++++++------- R/oneshot_fns.R | 42 ++++++++++++++++++------------------------ man/e_dist.Rd | 10 ++++++++-- man/sp.Rd | 36 ++++++++++++++++++++++++------------ man/sp_seq.Rd | 24 ++++++++++++++++-------- man/support-package.Rd | 6 +++--- src/Makevars | 3 ++- src/init.c | 38 +++++++++++++++++++------------------- src/support.cpp | 42 +++++++++++++++++++++++++++++------------- 12 files changed, 164 insertions(+), 117 deletions(-)
Title: Quantile Regression
Description: Estimation and inference methods for models of conditional quantiles:
Linear and nonlinear parametric and non-parametric (total variation penalized) models
for conditional quantiles of a univariate response and several methods for handling
censored survival data. Portfolio selection methods based on expected shortfall
risk are also included.
Author: Roger Koenker [cre, aut],
Stephen Portnoy [ctb] (Contributions to Censored QR code),
Pin Tian Ng [ctb] (Contributions to Sparse QR code),
Achim Zeileis [ctb] (Contributions to dynrq code essentially identical
to his dynlm code),
Philip Grosjean [ctb] (Contributions to nlrq code),
Brian D Ripley [trl, ctb] (Initial (2001) R port from S (to my
everlasting shame -- how could I have been so slow to adopt R!) and
for numerous other suggestions and useful advice)
Maintainer: Roger Koenker <rkoenker@illinois.edu>
Diff between quantreg versions 5.41 dated 2019-06-28 and 5.42 dated 2019-07-15
quantreg-5.41/quantreg/inst/doc/rq.R |only quantreg-5.41/quantreg/inst/doc/rq.Rnw |only quantreg-5.41/quantreg/inst/doc/rqss.pdf |only quantreg-5.41/quantreg/vignettes/abbrev.bib |only quantreg-5.41/quantreg/vignettes/book.bib |only quantreg-5.41/quantreg/vignettes/rq.Rnw |only quantreg-5.42/quantreg/DESCRIPTION | 9 +++++---- quantreg-5.42/quantreg/MD5 | 22 ++++++++++------------ quantreg-5.42/quantreg/build/vignette.rds |binary quantreg-5.42/quantreg/inst/ChangeLog | 11 +++++++++++ quantreg-5.42/quantreg/inst/doc/crq.pdf.asis |only quantreg-5.42/quantreg/inst/doc/rq.pdf.asis |only quantreg-5.42/quantreg/man/dynrq.Rd | 4 ++-- quantreg-5.42/quantreg/src/mcmb.c | 2 +- quantreg-5.42/quantreg/src/quantreg_init.c | 3 ++- quantreg-5.42/quantreg/vignettes/crq.pdf.asis |only quantreg-5.42/quantreg/vignettes/rq.pdf.asis |only 17 files changed, 31 insertions(+), 20 deletions(-)
Title: Solvers for Initial Value Problems of Differential Equations
('ODE', 'DAE', 'DDE')
Description: Functions that solve initial value problems of a system
of first-order ordinary differential equations ('ODE'), of
partial differential equations ('PDE'), of differential
algebraic equations ('DAE'), and of delay differential
equations. The functions provide an interface to the FORTRAN
functions 'lsoda', 'lsodar', 'lsode', 'lsodes' of the 'ODEPACK'
collection, to the FORTRAN functions 'dvode', 'zvode' and 'daspk'
and a C-implementation of solvers of the 'Runge-Kutta' family with
fixed or variable time steps. The package contains routines
designed for solving 'ODEs' resulting from 1-D, 2-D and 3-D
partial differential equations ('PDE') that have been converted
to 'ODEs' by numerical differencing.
Author: Karline Soetaert [aut] (<https://orcid.org/0000-0003-4603-7100>),
Thomas Petzoldt [aut, cre] (<https://orcid.org/0000-0002-4951-6468>),
R. Woodrow Setzer [aut] (<https://orcid.org/0000-0002-6709-9186>),
odepack authors [cph]
Maintainer: Thomas Petzoldt <thomas.petzoldt@tu-dresden.de>
Diff between deSolve versions 1.23 dated 2019-06-29 and 1.24 dated 2019-07-15
DESCRIPTION | 21 ++++--- MD5 | 26 ++++---- NEWS | 8 ++ R/iteration.R | 2 build/vignette.rds |binary data/ccl4data.rda |binary inst/doc/compiledCode.pdf |binary inst/doc/deSolve.pdf |binary src/call_lsoda.c | 30 +++++++--- src/ddaspk.f | 136 ++++++++++++++++++++++++++++++++++++++++++++-- src/dlsoder.f | 17 +++-- src/opkda1.f | 47 +++++++++------ src/opkdmain.f | 35 +++++++---- src/rprintf.c | 31 +++++----- 14 files changed, 262 insertions(+), 91 deletions(-)
Title: Efficient Bayesian Inference for Time-Varying Parameter Models
with Shrinkage
Description: Efficient Markov chain Monte Carlo (MCMC) algorithms for fully Bayesian estimation of time-varying parameter models with shrinkage priors. Details on the algorithms used are provided in Bitto and Frühwirth-Schnatter (2019) <doi:10.1016/j.jeconom.2018.11.006>.
Author: Peter Knaus [aut, cre] (<https://orcid.org/0000-0001-6498-7084>),
Angela Bitto-Nemling [aut],
Annalisa Cadonna [aut] (<https://orcid.org/0000-0003-0360-7628>),
Sylvia Frühwirth-Schnatter [aut]
(<https://orcid.org/0000-0003-0516-5552>),
Daniel Winkler [ctb],
Kemal Dingic [ctb]
Maintainer: Peter Knaus <peter.knaus@wu.ac.at>
Diff between shrinkTVP versions 1.0.0 dated 2019-06-19 and 1.0.1 dated 2019-07-15
DESCRIPTION | 6 +++--- MD5 | 19 +++++++++++-------- NAMESPACE | 1 + NEWS.md |only R/RcppExports.R | 4 ++-- R/shrinkTVP.R | 14 +++----------- R/utilities_shrink_TVP_res.R | 22 ++++++++++++++++++++++ man/print.shrinkTVP_res.Rd |only man/shrinkTVP.Rd | 8 +++----- src/RcppExports.cpp | 10 ++++------ src/shrink_TVP.cpp | 2 -- tests/testthat/Rplots.pdf |only 12 files changed, 49 insertions(+), 37 deletions(-)
More information about leaflet.providers at CRAN
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Title: Econometric Analysis of Explosive Time Series
Description: Testing for and dating periods of explosive
dynamics (exuberance) in time series using the univariate and panel
recursive unit root tests proposed by Phillips et al. (2015)
<doi:10.1111/iere.12132> and Pavlidis et al. (2016)
<doi:10.1007/s11146-015-9531-2>. The recursive least-squares
algorithm utilizes the matrix inversion lemma to avoid matrix
inversion which results in significant speed improvements. Simulation
of a variety of periodically-collapsing bubble processes.
Author: Kostas Vasilopoulos [cre, aut],
Efthymios Pavlidis [aut],
Simon Spavound [aut],
Enrique Martínez-García [aut]
Maintainer: Kostas Vasilopoulos <k.vasilopoulo@gmail.com>
Diff between exuber versions 0.2.1 dated 2019-03-01 and 0.3.0 dated 2019-07-15
exuber-0.2.1/exuber/inst/figures |only exuber-0.2.1/exuber/man/sim_dgp1.Rd |only exuber-0.2.1/exuber/man/sim_dgp2.Rd |only exuber-0.3.0/exuber/DESCRIPTION | 65 +- exuber-0.3.0/exuber/MD5 | 143 +++--- exuber-0.3.0/exuber/NAMESPACE | 95 +++- exuber-0.3.0/exuber/NEWS.md | 48 ++ exuber-0.3.0/exuber/R/RcppExports.R | 1 exuber-0.3.0/exuber/R/autoplot.R | 323 +++++++++----- exuber-0.3.0/exuber/R/col_names.R | 16 exuber-0.3.0/exuber/R/data-crit.R | 15 exuber-0.3.0/exuber/R/deprecate.R | 23 - exuber-0.3.0/exuber/R/exuber-package.r | 19 exuber-0.3.0/exuber/R/index.R | 59 +- exuber-0.3.0/exuber/R/mc_cv.R | 205 +++++--- exuber-0.3.0/exuber/R/parse_data.R |only exuber-0.3.0/exuber/R/radf.R | 160 +++--- exuber-0.3.0/exuber/R/reexports.R | 39 + exuber-0.3.0/exuber/R/sb_cv.R | 195 ++++---- exuber-0.3.0/exuber/R/simul.R | 127 +++-- exuber-0.3.0/exuber/R/summary.R | 435 +++++++++++-------- exuber-0.3.0/exuber/R/tidiers-cv.R |only exuber-0.3.0/exuber/R/tidiers-join.R |only exuber-0.3.0/exuber/R/tidiers-radf.R |only exuber-0.3.0/exuber/R/utils-attrs.R |only exuber-0.3.0/exuber/R/utils-defensive.R |only exuber-0.3.0/exuber/R/utils.R | 176 +++---- exuber-0.3.0/exuber/R/wb_cv.R | 221 +++++---- exuber-0.3.0/exuber/R/zzz.R | 7 exuber-0.3.0/exuber/README.md | 171 +------ exuber-0.3.0/exuber/build |only exuber-0.3.0/exuber/data/crit.rda |binary exuber-0.3.0/exuber/inst/CITATION | 4 exuber-0.3.0/exuber/inst/WORDLIST |only exuber-0.3.0/exuber/inst/doc |only exuber-0.3.0/exuber/man/augment_join.Rd |only exuber-0.3.0/exuber/man/autoplot.datestamp.Rd | 12 exuber-0.3.0/exuber/man/autoplot.mc_distr.Rd |only exuber-0.3.0/exuber/man/autoplot.radf.Rd | 28 - exuber-0.3.0/exuber/man/calc_pvalue.Rd |only exuber-0.3.0/exuber/man/col_names.Rd | 4 exuber-0.3.0/exuber/man/crit.Rd | 21 exuber-0.3.0/exuber/man/datestamp.Rd | 5 exuber-0.3.0/exuber/man/diagnostics.Rd | 2 exuber-0.3.0/exuber/man/exuber-deprecated.Rd | 15 exuber-0.3.0/exuber/man/exuber.Rd | 43 + exuber-0.3.0/exuber/man/figures |only exuber-0.3.0/exuber/man/index.radf.Rd | 8 exuber-0.3.0/exuber/man/mc_cv.Rd | 27 - exuber-0.3.0/exuber/man/pipe.Rd | 2 exuber-0.3.0/exuber/man/print.ggarrange.Rd | 3 exuber-0.3.0/exuber/man/psy_minw.Rd |only exuber-0.3.0/exuber/man/radf.Rd | 14 exuber-0.3.0/exuber/man/reexports.Rd | 24 + exuber-0.3.0/exuber/man/sb_cv.Rd | 35 + exuber-0.3.0/exuber/man/sim_blan.Rd | 13 exuber-0.3.0/exuber/man/sim_div.Rd | 11 exuber-0.3.0/exuber/man/sim_evans.Rd | 10 exuber-0.3.0/exuber/man/sim_psy1.Rd |only exuber-0.3.0/exuber/man/sim_psy2.Rd |only exuber-0.3.0/exuber/man/summary.Rd | 13 exuber-0.3.0/exuber/man/tidy.mc_cv.Rd |only exuber-0.3.0/exuber/man/tidy.mc_distr.Rd |only exuber-0.3.0/exuber/man/tidy.radf.Rd |only exuber-0.3.0/exuber/man/wb_cv.Rd | 24 - exuber-0.3.0/exuber/tests/spelling.R |only exuber-0.3.0/exuber/tests/testthat/helper.R | 20 exuber-0.3.0/exuber/tests/testthat/test-autoplot.R | 49 +- exuber-0.3.0/exuber/tests/testthat/test-col_names.R | 6 exuber-0.3.0/exuber/tests/testthat/test-cv.R | 55 +- exuber-0.3.0/exuber/tests/testthat/test-depracated.R |only exuber-0.3.0/exuber/tests/testthat/test-dist.R |only exuber-0.3.0/exuber/tests/testthat/test-fortify.R | 38 + exuber-0.3.0/exuber/tests/testthat/test-index.R | 12 exuber-0.3.0/exuber/tests/testthat/test-panel.R | 14 exuber-0.3.0/exuber/tests/testthat/test-radf.R | 23 - exuber-0.3.0/exuber/tests/testthat/test-seed.R |only exuber-0.3.0/exuber/tests/testthat/test-sim.R | 20 exuber-0.3.0/exuber/tests/testthat/test-summary.R | 45 + exuber-0.3.0/exuber/tests/testthat/test-tidiers.R |only exuber-0.3.0/exuber/vignettes |only 81 files changed, 1919 insertions(+), 1224 deletions(-)
More information about CautiousLearning at CRAN
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Title: Survey Standard Error Estimation for Cumulated Estimates and
their Differences in Complex Panel Designs
Description: Calculate point estimates and their standard errors in complex household surveys using bootstrap replicates. Bootstrapping considers survey design with a rotating panel. A comprehensive description of the methodology can be found under <https://statistikat.github.io/surveysd/articles/methodology.html>.
Author: Johannes Gussenbauer [aut, cre],
Alexander Kowarik [aut] (<https://orcid.org/0000-0001-8598-4130>),
Gregor de Cillia [aut],
Matthias Till [ctb]
Maintainer: Johannes Gussenbauer <Johannes.Gussenbauer@statistik.gv.at>
Diff between surveysd versions 1.0.0 dated 2019-01-25 and 1.1.0 dated 2019-07-15
surveysd-1.0.0/surveysd/tests/testthat/Rplots.pdf |only surveysd-1.1.0/surveysd/DESCRIPTION | 10 surveysd-1.1.0/surveysd/MD5 | 89 surveysd-1.1.0/surveysd/NAMESPACE | 3 surveysd-1.1.0/surveysd/NEWS.md | 30 surveysd-1.1.0/surveysd/R/RcppExports.R | 26 surveysd-1.1.0/surveysd/R/calc.stError.R | 1019 +++++----- surveysd-1.1.0/surveysd/R/computeFrac.R | 20 surveysd-1.1.0/surveysd/R/demo.eusilc.R | 48 surveysd-1.1.0/surveysd/R/draw.bootstrap.R | 445 ++-- surveysd-1.1.0/surveysd/R/generateHHID.R | 133 - surveysd-1.1.0/surveysd/R/helpers.R | 69 surveysd-1.1.0/surveysd/R/ipf.r | 888 ++++---- surveysd-1.1.0/surveysd/R/plot.R | 443 ++-- surveysd-1.1.0/surveysd/R/print.R | 69 surveysd-1.1.0/surveysd/R/recalib.R | 386 ++- surveysd-1.1.0/surveysd/R/rescaled.bootstrap.R | 540 +++-- surveysd-1.1.0/surveysd/README.md | 80 surveysd-1.1.0/surveysd/build |only surveysd-1.1.0/surveysd/inst |only surveysd-1.1.0/surveysd/man/calc.stError.Rd | 321 ++- surveysd-1.1.0/surveysd/man/computeFrac.Rd | 16 surveysd-1.1.0/surveysd/man/cpp_mean.Rd | 10 surveysd-1.1.0/surveysd/man/demo.eusilc.Rd | 23 surveysd-1.1.0/surveysd/man/draw.bootstrap.Rd | 224 +- surveysd-1.1.0/surveysd/man/generate.HHID.Rd | 43 surveysd-1.1.0/surveysd/man/ipf.Rd | 192 - surveysd-1.1.0/surveysd/man/plot.surveysd.Rd | 40 surveysd-1.1.0/surveysd/man/print.surveysd.Rd | 3 surveysd-1.1.0/surveysd/man/recalib.Rd | 70 surveysd-1.1.0/surveysd/man/rescaled.bootstrap.Rd | 81 surveysd-1.1.0/surveysd/src/gm_mean.cpp | 42 surveysd-1.1.0/surveysd/tests/testthat/test_calcstError.R | 411 +--- surveysd-1.1.0/surveysd/tests/testthat/test_calcstError_long.R |only surveysd-1.1.0/surveysd/tests/testthat/test_drawbootstrap.R | 283 +- surveysd-1.1.0/surveysd/tests/testthat/test_generateHHID.R | 86 surveysd-1.1.0/surveysd/tests/testthat/test_ipf.R | 172 + surveysd-1.1.0/surveysd/tests/testthat/test_plot.R | 101 surveysd-1.1.0/surveysd/tests/testthat/test_recalib.R | 117 - surveysd-1.1.0/surveysd/tests/testthat/test_rescaledbootstrap.R | 201 + surveysd-1.1.0/surveysd/vignettes |only 41 files changed, 3918 insertions(+), 2816 deletions(-)
Title: Geographically-Weighted Models
Description: Techniques from a particular branch of spatial statistics,termed geographically-weighted (GW) models. GW models suit situations when data are not described well by some global model, but where there are spatial regions where a suitably localised calibration provides a better description. 'GWmodel' includes functions to calibrate: GW summary statistics (Brunsdon et al. 2002)<doi: 10.1016/s0198-9715(01)00009-6>, GW principal components analysis (Harris et al. 2011)<doi: 10.1080/13658816.2011.554838>, GW discriminant analysis (Brunsdon et al. 2007)<doi: 10.1111/j.1538-4632.2007.00709.x> and various forms of GW regression (Brunsdon et al. 1996)<doi: 10.1111/j.1538-4632.1996.tb00936.x>; some of which are provided in basic and robust (outlier resistant) forms.
Author: Binbin Lu[aut], Paul Harris[aut], Martin Charlton[aut], Chris Brunsdon[aut], Tomoki Nakaya[aut], Daisuke Murakami[aut],Isabella Gollini[ctb]
Maintainer: Binbin Lu <binbinlu@whu.edu.cn>
Diff between GWmodel versions 2.1-2 dated 2019-07-08 and 2.1-3 dated 2019-07-15
DESCRIPTION | 10 ++-- MD5 | 12 ++--- R/gwr.basic.r | 2 R/zzz.r | 2 man/GWmodel-package.Rd | 4 - src/GWmodel.cpp | 111 +++++++++++++++++++++++-------------------------- src/RcppExports.cpp | 68 +++++++++++++++--------------- 7 files changed, 104 insertions(+), 105 deletions(-)
Title: Plotting, Smoothing and Growth Trait Extraction for Longitudinal
Data
Description: Assists in producing longitudinal or profile plots of measured
traits. These allow checks to be made for anomalous data and growth patterns
in the data to be explored. Smoothing of growth trends for individual plants
using smoothing splines is available for removing transient effects. There
are tools for diagnosing the adequacy of trait smoothing, either using this
package or other packages, such as those that fit nonlinear growth models.
A range of per-unit (pot, plant, plot) growth traits can be extracted from
longitudinal data, including single time-point smoothed trait values and
their growth rates, interval growth rates and other growth statistics, such
as maximum growth. The package is particularly suited to preparing data from
high-throughput phenotyping facilities, such as imaging data from a Lemna-Tec Scananalyzer
(see <http://www.lemnatec.com/products/hardware-solutions/scanalyzer-3d> for more
information). The package 'growthPheno' can also be installed from
<http://chris.brien.name/rpackages/>.
Author: Chris Brien [aut, cre] (<https://orcid.org/0000-0003-0581-1817>)
Maintainer: Chris Brien <chris.brien@unisa.edu.au>
Diff between growthPheno versions 1.0-13 dated 2019-05-14 and 1.0-15 dated 2019-07-15
DESCRIPTION | 8 +- MD5 | 37 ++++++------ R/dataLongi_v9.r | 36 ++++++++---- build/partial.rdb |binary build/vignette.rds |binary data/RiceRaw.dat.rda |binary data/exampleData.rda |binary data/tomato.dat.rda |binary inst/News.Rd | 10 +++ inst/doc/growthPheno-manual.pdf |binary man/tomato.dat.Rd | 8 +- tests/testthat/Rplots.pdf |only tests/testthat/data/area.dat.rda |binary tests/testthat/data/chkpeadat.rda |binary tests/testthat/data/dat1.rda |binary tests/testthat/data/raw.19.dat.rda |binary tests/testthat/data/raw.RGB.dat.rda |binary tests/testthat/data/raw.fluo.dat.rda |binary tests/testthat/data/testSpline.rda |binary tests/testthat/testProbeSmooth.r | 100 ++++++++++++++++++----------------- 20 files changed, 113 insertions(+), 86 deletions(-)
Title: Analyze Dose-Volume Histograms and Check Constraints
Description: Functionality for analyzing dose-volume histograms (DVH)
in radiation oncology: Read DVH text files, calculate DVH
metrics as well as generalized equivalent uniform dose (gEUD),
biologically effective dose (BED), equivalent dose in 2 Gy
fractions (EQD2), normal tissue complication probability
(NTCP), and tumor control probability (TCP). Show DVH
diagrams, check and visualize quality assurance constraints
for the DVH. Includes web-based graphical user interface.
Author: Daniel Wollschlaeger [aut, cre],
Heiko Karle [aut],
Heinz Schmidberger [ctb]
Maintainer: Daniel Wollschlaeger <wollschlaeger@uni-mainz.de>
Diff between DVHmetrics versions 0.3.8 dated 2019-03-26 and 0.3.9 dated 2019-07-15
DESCRIPTION | 10 ++--- MD5 | 40 +++++++++++----------- NAMESPACE | 1 R/checkConstraint.R | 4 +- R/getMetric.R | 4 +- R/parseMasterplan.R | 26 ++++++++++---- R/unix/parseDVH.R | 1 build/vignette.rds |binary data/dataConstr.rda |binary data/dataMZ.rda |binary inst/ChangeLog | 16 ++++++++ inst/DVHshiny/server.R | 83 +++++++++++++++++++++++++++++++++++++++++++++- inst/DVHshiny/ui.R | 4 ++ inst/doc/DVHmetrics.Rnw | 2 - inst/doc/DVHmetrics.pdf |binary inst/doc/DVHshiny.Rnw | 2 - inst/doc/DVHshiny.pdf |binary man/DVHmetrics-package.Rd | 4 +- vignettes/DVHmetrics.Rnw | 2 - vignettes/DVHshiny.Rnw | 2 - vignettes/lit.bib | 36 +++++++------------ 21 files changed, 170 insertions(+), 67 deletions(-)
Title: Mixed Proportional Hazard Competing Risk Model
Description: Estimation of piecewise constant mixed proportional hazard competing risk model with NPMLE.
The model is described in S. Gaure et al. (2007) <doi:10.1016/j.jeconom.2007.01.015>,
J. Heckman and B. Singer (1984) <doi:10.2307/1911491>, and
B.G. Lindsay (1983) <doi:10.1214/aos/1176346059>.
Author: Simen Gaure [aut, cre] (<https://orcid.org/0000-0001-7251-8747>)
Maintainer: Simen Gaure <simen@gaure.no>
Diff between durmod versions 1.0-3 dated 2019-07-01 and 1.1 dated 2019-07-15
DESCRIPTION | 12 - MD5 | 51 ++++---- NAMESPACE | 4 R/cluster.R | 39 ++++-- R/duration.R | 286 ++++++++++++++++++++++++++++------------------ R/durmod-package.R | 2 R/generics.R | 15 ++ R/utils.R | 55 ++++++++ data/durdata.rda |binary inst/NEWS.Rd |only inst/doc/whatmph.R | 8 + inst/doc/whatmph.Rnw | 214 ++++++++++++++++++++++++++++------ inst/doc/whatmph.pdf |binary man/a2p.Rd | 6 man/durmod-package.Rd | 2 man/geninv.Rd | 3 man/mphcrm.Rd | 4 man/mphcrm.callback.Rd | 2 man/mphcrm.control.Rd | 13 +- man/pseudoR2.Rd |only man/se.Rd | 3 man/smashlevels.Rd |only man/timestr.Rd | 5 src/cfunctions.cpp | 26 +--- tests/sometests.R | 9 + tests/sometests.Rout.save | 38 ++++-- vignettes/biblio.bib | 12 + vignettes/whatmph.Rnw | 214 ++++++++++++++++++++++++++++------ 28 files changed, 755 insertions(+), 268 deletions(-)
Title: 'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra
Library
Description: 'Armadillo' is a templated C++ linear algebra library (by Conrad
Sanderson) that aims towards a good balance between speed and ease of use. Integer,
floating point and complex numbers are supported, as well as a subset of
trigonometric and statistics functions. Various matrix decompositions are
provided through optional integration with LAPACK and ATLAS libraries.
The 'RcppArmadillo' package includes the header files from the templated
'Armadillo' library. Thus users do not need to install 'Armadillo' itself in
order to use 'RcppArmadillo'. From release 7.800.0 on, 'Armadillo' is
licensed under Apache License 2; previous releases were under licensed as
MPL 2.0 from version 3.800.0 onwards and LGPL-3 prior to that;
'RcppArmadillo' (the 'Rcpp' bindings/bridge to Armadillo) is licensed under
the GNU GPL version 2 or later, as is the rest of 'Rcpp'. Note that
Armadillo requires a fairly recent compiler; for the g++ family at least
version 4.6.* is required.
Author: Dirk Eddelbuettel, Romain Francois, Doug Bates and Binxiang Ni
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppArmadillo versions 0.9.500.2.0 dated 2019-06-12 and 0.9.600.4.0 dated 2019-07-15
ChangeLog | 35 + DESCRIPTION | 8 MD5 | 64 - build/vignette.rds |binary inst/NEWS.Rd | 14 inst/doc/RcppArmadillo-intro.pdf |binary inst/doc/RcppArmadillo-sparseMatrix.pdf |binary inst/examples/fastLm.r | 2 inst/include/armadillo_bits/Cube_bones.hpp | 2 inst/include/armadillo_bits/Cube_meat.hpp | 14 inst/include/armadillo_bits/MapMat_bones.hpp | 53 - inst/include/armadillo_bits/MapMat_meat.hpp | 677 +++++++++------------ inst/include/armadillo_bits/Mat_bones.hpp | 2 inst/include/armadillo_bits/Mat_meat.hpp | 48 + inst/include/armadillo_bits/SpMat_bones.hpp | 10 inst/include/armadillo_bits/SpMat_meat.hpp | 415 +++++++----- inst/include/armadillo_bits/SpSubview_bones.hpp | 4 inst/include/armadillo_bits/SpSubview_meat.hpp | 255 ++----- inst/include/armadillo_bits/arma_ostream_meat.hpp | 41 + inst/include/armadillo_bits/arma_version.hpp | 6 inst/include/armadillo_bits/arrayops_bones.hpp | 10 inst/include/armadillo_bits/arrayops_meat.hpp | 49 + inst/include/armadillo_bits/fn_clamp.hpp | 39 + inst/include/armadillo_bits/glue_solve_meat.hpp | 28 inst/include/armadillo_bits/op_clamp_meat.hpp | 14 inst/include/armadillo_bits/spdiagview_meat.hpp | 177 +++-- inst/include/armadillo_bits/spglue_merge_bones.hpp | 12 inst/include/armadillo_bits/spglue_merge_meat.hpp | 469 +++++++++++++- inst/include/armadillo_bits/spop_symmat_meat.hpp | 306 --------- inst/include/armadillo_bits/subview_bones.hpp | 2 inst/include/armadillo_bits/subview_cube_bones.hpp | 2 inst/include/armadillo_bits/subview_cube_meat.hpp | 22 inst/include/armadillo_bits/subview_meat.hpp | 20 33 files changed, 1589 insertions(+), 1211 deletions(-)
Title: Adding Progress Bar to '*apply' Functions
Description: A lightweight package that adds
progress bar to vectorized R functions
('*apply'). The implementation can easily be added
to functions where showing the progress is
useful (e.g. bootstrap). The type and style of the
progress bar (with percentages or remaining time)
can be set through options.
Supports several parallel processing backends.
Author: Peter Solymos [aut, cre], Zygmunt Zawadzki [aut]
Maintainer: Peter Solymos <solymos@ualberta.ca>
Diff between pbapply versions 1.4-0 dated 2019-02-05 and 1.4-1 dated 2019-07-15
DESCRIPTION | 8 ++--- MD5 | 6 +-- R/timerProgressBar.R | 78 +++++++++++++++++++++++++++------------------------ man/pbapply.Rd | 2 - 4 files changed, 50 insertions(+), 44 deletions(-)
Title: Paginate the HTML Output of R Markdown with CSS for Print
Description: Use the paged media properties in CSS and the JavaScript
library 'paged.js' to split the content of an HTML document into discrete
pages. Each page can have its page size, page numbers, margin boxes, and
running headers, etc. Applications of this package include books, letters,
reports, papers, business cards, resumes, and posters.
Author: Yihui Xie [aut, cre] (<https://orcid.org/0000-0003-0645-5666>),
Romain Lesur [aut, cph] (<https://orcid.org/0000-0002-0721-5595>),
Brent Thorne [aut] (<https://orcid.org/0000-0002-1099-3857>),
Christophe Dervieux [ctb] (<https://orcid.org/0000-0003-4474-2498>),
Atsushi Yasumoto [ctb] (<https://orcid.org/0000-0002-8335-495X>),
RStudio, Inc. [cph],
Adam Hyde [ctb] (paged.js in resources/js/),
Min-Zhong Lu [ctb] (resume.css in resources/css/),
Zulko [ctb] (poster-relaxed.css in resources/css/)
Maintainer: Yihui Xie <xie@yihui.name>
Diff between pagedown versions 0.2 dated 2019-03-06 and 0.3 dated 2019-07-15
pagedown-0.2/pagedown/inst/resources/html/ws-server.html |only pagedown-0.3/pagedown/DESCRIPTION | 14 pagedown-0.3/pagedown/MD5 | 40 pagedown-0.3/pagedown/NAMESPACE | 1 pagedown-0.3/pagedown/NEWS.md | 36 pagedown-0.3/pagedown/R/chrome.R | 306 +-- pagedown-0.3/pagedown/R/paged.R | 41 pagedown-0.3/pagedown/R/utils.R | 6 pagedown-0.3/pagedown/README.md | 10 pagedown-0.3/pagedown/inst/resources/css/default-page.css | 12 pagedown-0.3/pagedown/inst/resources/css/default.css | 42 pagedown-0.3/pagedown/inst/resources/css/jss.css | 12 pagedown-0.3/pagedown/inst/resources/css/resume.css | 8 pagedown-0.3/pagedown/inst/resources/css/thesis.css |only pagedown-0.3/pagedown/inst/resources/html/paged.html | 6 pagedown-0.3/pagedown/inst/resources/html/thesis.html |only pagedown-0.3/pagedown/inst/resources/js/config.js | 156 - pagedown-0.3/pagedown/inst/resources/js/hooks.js | 168 + pagedown-0.3/pagedown/inst/resources/js/paged.js | 1059 +++++++++--- pagedown-0.3/pagedown/inst/resources/lua/uri-to-fn.lua | 7 pagedown-0.3/pagedown/inst/rmarkdown/templates/thesis-paged |only pagedown-0.3/pagedown/man/chrome_print.Rd | 9 pagedown-0.3/pagedown/man/thesis_paged.Rd |only 23 files changed, 1433 insertions(+), 500 deletions(-)
Title: Statistical Inference of Vine Copulas
Description: Provides tools for the statistical analysis of vine copula models.
The package includes tools for parameter estimation, model selection,
simulation, goodness-of-fit tests, and visualization. Tools for estimation,
selection and exploratory data analysis of bivariate copula models are also
provided.
Author: Thomas Nagler [aut, cre],
Ulf Schepsmeier [aut],
Jakob Stoeber [aut],
Eike Christian Brechmann [aut],
Benedikt Graeler [aut],
Tobias Erhardt [aut],
Carlos Almeida [ctb],
Aleksey Min [ctb, ths],
Claudia Czado [ctb, ths],
Mathias Hofmann [ctb],
Matthias Killiches [ctb],
Harry Joe [ctb],
Thibault Vatter [ctb]
Maintainer: Thomas Nagler <thomas.nagler@tum.de>
Diff between VineCopula versions 2.1.8 dated 2018-09-18 and 2.2.0 dated 2019-07-15
DESCRIPTION | 14 ++--- MD5 | 44 ++++++++-------- NAMESPACE | 2 NEWS.md | 20 +++++++ R/0_prep_object.R | 1 R/BiCopCheck.R | 4 + R/BiCopCondSim.R | 4 - R/BiCopLambda.R | 12 +--- R/BiCopSelect.R | 2 R/RVineCopSelect.R | 31 +++++++---- R/RVineStructureSelect.R | 113 ++++++++++++++++++++++++------------------ R/RVineVuongTest.R | 18 ++---- R/as.copuladata.R | 18 +++--- R/preprocessors.R | 5 - README.md | 8 +- build/partial.rdb |binary inst/include/VineCopula/pit.h | 2 man/BiCopSelect.Rd | 2 man/RVineCopSelect.Rd | 15 ++++- man/RVineStructureSelect.Rd | 12 ++-- man/as.copuladata.Rd | 6 +- man/copulaFromFamilyIndex.Rd | 2 src/pit.c | 86 +++++++++++++++---------------- 23 files changed, 234 insertions(+), 187 deletions(-)
Title: Simulation of in Silico Multi-Omic Networks
Description: A tool for the simulation of gene expression profiles for in silico regulatory networks. The package generates gene regulatory networks, which include protein-coding and noncoding genes linked via different types of regulation: regulation of transcription, translation, RNA or protein decay, and post-translational modifications. The effect of genetic mutations on the system behaviour is accounted for via the simulation of genetically different in silico individuals. The ploidy of the system is not restricted to the usual haploid or diploid situations, but is defined by the user. A choice of stochastic simulation algorithms allow us to simulate the expression profiles (RNA and if applicable protein abundance) of the genes in the in silico system for the different in silico individuals. A tutorial explaining how to use the package is available at <https://oliviaab.github.io/sismonr/>. Manuscript in preparation; see also Angelin-Bonnet O., Biggs P.J. and Vignes M. (2018) <doi:10.1109/BIBM.2018.8621131>.
Author: Olivia Angelin-Bonnet [aut, cre]
(<https://orcid.org/0000-0002-7708-2919>),
Patrick Biggs [aut] (<https://orcid.org/0000-0002-0285-4101>),
Matthieu Vignes [aut] (<https://orcid.org/0000-0001-8929-2975>),
John M. Chambers [ctb]
Maintainer: Olivia Angelin-Bonnet <olivia.angelinbonnet@gmail.com>
Diff between sismonr versions 1.1.2 dated 2019-05-24 and 1.1.3 dated 2019-07-15
DESCRIPTION | 6 MD5 | 8 NEWS.md | 3 R/zzz.R | 8 inst/doc/sismonr_vignette.html | 494 +++++++++++++++++++++++++++++------------ 5 files changed, 367 insertions(+), 152 deletions(-)
Title: Tools to Support Evidence Synthesis
Description: Researchers commonly need to summarize scientific information, a process known as 'evidence synthesis'. The first stage of a synthesis process (such as a systematic review or meta-analysis) is to download a list of references from academic search engines such as 'Web of Knowledge' or 'Scopus'. The traditional approach to systematic review is then to sort these data manually, first by locating and removing duplicated entries, and then screening to remove irrelevant content by viewing titles and abstracts (in that order). 'revtools' provides interfaces for each of these tasks. An alternative approach, however, is to draw on tools from machine learning to visualise patterns in the corpus. In this case, you can use 'revtools' to render ordinations of text drawn from article titles, keywords and abstracts, and interactively select or exclude individual references, words or topics.
Author: Martin J. Westgate [aut, cre]
Maintainer: Martin J. Westgate <martinjwestgate@gmail.com>
Diff between revtools versions 0.3.0 dated 2018-11-29 and 0.4.0 dated 2019-07-15
revtools-0.3.0/revtools/INDEX |only revtools-0.3.0/revtools/README.md |only revtools-0.4.0/revtools/DESCRIPTION | 11 revtools-0.4.0/revtools/MD5 | 60 +-- revtools-0.4.0/revtools/NAMESPACE | 10 revtools-0.4.0/revtools/R/bibliography-methods.R | 9 revtools-0.4.0/revtools/R/distribute_tasks.R |only revtools-0.4.0/revtools/R/make_dtm.R | 86 ++--- revtools-0.4.0/revtools/R/merge_columns.R | 67 ++-- revtools-0.4.0/revtools/R/read_bibliography.R | 153 ++++++--- revtools-0.4.0/revtools/R/revtools_appearance.R | 11 revtools-0.4.0/revtools/R/screen_abstracts.R | 195 +++++++++--- revtools-0.4.0/revtools/R/screen_abstracts_infrastructure.R | 14 revtools-0.4.0/revtools/R/screen_abstracts_ui.R | 50 ++- revtools-0.4.0/revtools/R/screen_duplicates.R | 185 +++++++---- revtools-0.4.0/revtools/R/screen_duplicates_ui.R | 58 ++- revtools-0.4.0/revtools/R/screen_titles.R | 141 +++++--- revtools-0.4.0/revtools/R/screen_titles_infrastructure.R | 66 +--- revtools-0.4.0/revtools/R/screen_titles_ui.R | 21 + revtools-0.4.0/revtools/R/screen_topics.R | 71 ++-- revtools-0.4.0/revtools/R/screen_topics_infrastructure.R | 14 revtools-0.4.0/revtools/R/screen_topics_ui.R | 55 ++- revtools-0.4.0/revtools/man/aggregate_tasks.Rd |only revtools-0.4.0/revtools/man/allocate_effort.Rd |only revtools-0.4.0/revtools/man/avian_ecology_bibliography.Rd | 1 revtools-0.4.0/revtools/man/distribute_tasks.Rd |only revtools-0.4.0/revtools/man/make_dtm.Rd | 8 revtools-0.4.0/revtools/man/merge_columns.Rd | 10 revtools-0.4.0/revtools/man/read_bibliograpy.Rd | 14 revtools-0.4.0/revtools/man/revtools.Rd | 6 revtools-0.4.0/revtools/man/screen_abstracts.Rd | 3 revtools-0.4.0/revtools/man/screen_duplicates.Rd | 3 revtools-0.4.0/revtools/man/screen_titles.Rd | 3 revtools-0.4.0/revtools/man/screen_topics.Rd | 8 34 files changed, 851 insertions(+), 482 deletions(-)
Title: Draw Population Pyramid
Description: Drawing population pyramid using (1) data.frame or (2) vectors.
The former is named as pyramid() and the latter pyramids(), as wrapper
function of pyramid(). pyramidf() is the function to draw population
pyramid within the specified frame.
Author: Minato Nakazawa <minato-nakazawa@umin.net>
Maintainer: Minato Nakazawa <minato-nakazawa@umin.net>
Diff between pyramid versions 1.4 dated 2014-09-06 and 1.5 dated 2019-07-15
DESCRIPTION | 12 ++++++------ MD5 | 14 +++++++------- NAMESPACE | 9 ++++++++- NEWS | 4 ++++ R/pyramid.R | 34 ++++++++++++++++++---------------- man/pyramid.Rd | 2 +- man/pyramidf.Rd | 2 +- man/pyramids.Rd | 6 +++--- 8 files changed, 48 insertions(+), 35 deletions(-)