Title: Methods for Statistical Disclosure Control in Tabular Data
Description: Methods for statistical disclosure control in
tabular data such as primary and secondary cell suppression as described for example
in Hundepol et al. (2012) <doi:10.1002/9781118348239> are covered in this package.
Author: Bernhard Meindl
Maintainer: Bernhard Meindl <bernhard.meindl@gmail.com>
Diff between sdcTable versions 0.28 dated 2019-06-04 and 0.29 dated 2019-08-31
DESCRIPTION | 10 MD5 | 34 +- NEWS.md | 5 R/createArgusInput.R | 174 ++++++------- R/generics_sdcProblem.r | 19 - R/methods_class_sdcProblem.r | 29 -- R/primarySuppression.R | 41 +-- R/utils.R | 7 R/writeJJFormat.R | 18 - build/vignette.rds |binary inst/doc/sdcTable.html | 6 man/calc.sdcProblem-method.Rd | 7 man/createArgusInput.Rd | 160 ++++++------ man/createJJFormat.Rd | 18 - man/primarySuppression.Rd | 16 - man/writeJJFormat.Rd | 18 - src/suppMultDimTable.cpp | 412 +++++++++++++++---------------- tests/testthat/test-primarySuppression.r | 34 +- 18 files changed, 494 insertions(+), 514 deletions(-)
Title: Functional Data Analysis and Empirical Dynamics
Description: A versatile package that provides implementation of various
methods of Functional Data Analysis (FDA) and Empirical Dynamics. The core of this
package is Functional Principal Component Analysis (FPCA), a key technique for
functional data analysis, for sparsely or densely sampled random trajectories
and time courses, via the Principal Analysis by Conditional Estimation
(PACE) algorithm. This core algorithm yields covariance and mean functions,
eigenfunctions and principal component (scores), for both functional data and
derivatives, for both dense (functional) and sparse (longitudinal) sampling designs.
For sparse designs, it provides fitted continuous trajectories with confidence bands,
even for subjects with very few longitudinal observations. PACE is a viable and
flexible alternative to random effects modeling of longitudinal data. There is also a
Matlab version (PACE) that contains some methods not available on fdapace and vice
versa. Please cite our package if you use it (You may run the command
devtools::citation("fdapace") to get the citation format and bibtex entry).
References: Wang, J.L., Chiou, J., Müller, H.G. (2016) <doi:10.1146/annurev-statistics-041715-033624>;
Chen, K., Zhang, X., Petersen, A., Müller, H.G. (2017) <doi:10.1007/s12561-015-9137-5>.
Author: Yaqing Chen [aut, cre],
Cody Carroll [aut],
Xiongtao Dai [aut],
Jianing Fan [aut],
Pantelis Z. Hadjipantelis [aut],
Kyunghee Han [aut],
Hao Ji [aut],
Shu-Chin Lin [ctb],
Hans-Georg Mueller [cph, ths, aut],
Jane-Ling Wang [cph, ths, aut]
Maintainer: Yaqing Chen <yaqchen@ucdavis.edu>
Diff between fdapace versions 0.4.1 dated 2019-03-19 and 0.5.0 dated 2019-08-31
fdapace-0.4.1/fdapace/R/FPCReg.R |only fdapace-0.4.1/fdapace/man/FPCReg.Rd |only fdapace-0.5.0/fdapace/DESCRIPTION | 69 +- fdapace-0.5.0/fdapace/LICENSE | 2 fdapace-0.5.0/fdapace/MD5 | 277 ++++---- fdapace-0.5.0/fdapace/NAMESPACE | 12 fdapace-0.5.0/fdapace/NEWS | 16 fdapace-0.5.0/fdapace/R/BwNN.R | 4 fdapace-0.5.0/fdapace/R/CheckAndCreateCOPoptions.R | 4 fdapace-0.5.0/fdapace/R/CheckOptions.R | 2 fdapace-0.5.0/fdapace/R/CompFntCent.R | 2 fdapace-0.5.0/fdapace/R/ConvertSupport.R | 2 fdapace-0.5.0/fdapace/R/CreateBWPlot.R | 4 fdapace-0.5.0/fdapace/R/CreateCovPlot.R | 6 fdapace-0.5.0/fdapace/R/CreateDesignPlot.R | 9 fdapace-0.5.0/fdapace/R/CreateFolds.R | 2 fdapace-0.5.0/fdapace/R/CreateFuncBoxPlot.R | 15 fdapace-0.5.0/fdapace/R/CreateModeOfVarPlot.R | 8 fdapace-0.5.0/fdapace/R/CreateOutliersPlot.R | 10 fdapace-0.5.0/fdapace/R/CreatePathPlot.R | 2 fdapace-0.5.0/fdapace/R/CreateStringingPlot.R | 4 fdapace-0.5.0/fdapace/R/DesignPlotCount.R | 2 fdapace-0.5.0/fdapace/R/DynCorr.R |only fdapace-0.5.0/fdapace/R/Dyn_test.R |only fdapace-0.5.0/fdapace/R/FAM.R | 22 fdapace-0.5.0/fdapace/R/FCCor.R | 2 fdapace-0.5.0/fdapace/R/FCReg.R | 8 fdapace-0.5.0/fdapace/R/FClust.R | 14 fdapace-0.5.0/fdapace/R/FLM.R |only fdapace-0.5.0/fdapace/R/FOptDes.R | 10 fdapace-0.5.0/fdapace/R/FPCA.R | 36 - fdapace-0.5.0/fdapace/R/FPCAder.R | 22 fdapace-0.5.0/fdapace/R/FPCquantile.R |only fdapace-0.5.0/fdapace/R/FSVD.R | 21 fdapace-0.5.0/fdapace/R/FVPA.R | 2 fdapace-0.5.0/fdapace/R/GCVLwls1D1.R | 4 fdapace-0.5.0/fdapace/R/GCVLwls2DV2.R | 2 fdapace-0.5.0/fdapace/R/GenBSpline.R |only fdapace-0.5.0/fdapace/R/GetCEScores.R | 108 +-- fdapace-0.5.0/fdapace/R/GetCrCorYX.R | 3 fdapace-0.5.0/fdapace/R/GetCrCorYZ.R | 3 fdapace-0.5.0/fdapace/R/GetCrCovYX.R | 6 fdapace-0.5.0/fdapace/R/GetCrCovYX_old.R | 4 fdapace-0.5.0/fdapace/R/GetCrCovYZ.R | 8 fdapace-0.5.0/fdapace/R/GetEigenAnalysisResults.R | 2 fdapace-0.5.0/fdapace/R/GetINScores.R | 47 - fdapace-0.5.0/fdapace/R/GetMinb.R | 6 fdapace-0.5.0/fdapace/R/GetNormalisedSample.R | 2 fdapace-0.5.0/fdapace/R/GetSmoothedCovarSurface.R | 2 fdapace-0.5.0/fdapace/R/GetSmoothedMeanCurve.R | 4 fdapace-0.5.0/fdapace/R/GetUserCov.R | 2 fdapace-0.5.0/fdapace/R/GetUserMeanCurve.R | 2 fdapace-0.5.0/fdapace/R/HandleNumericsAndNAN.R | 2 fdapace-0.5.0/fdapace/R/IsRegular.R | 2 fdapace-0.5.0/fdapace/R/List2Mat.R | 2 fdapace-0.5.0/fdapace/R/Lwls1D.R | 2 fdapace-0.5.0/fdapace/R/Lwls2DDeriv.R | 4 fdapace-0.5.0/fdapace/R/MCVOptRidge.R | 10 fdapace-0.5.0/fdapace/R/MakeGPFunctionalData.R | 4 fdapace-0.5.0/fdapace/R/MakeHCtoZscore02y.R | 2 fdapace-0.5.0/fdapace/R/MakeLNtoZscore02y.R | 2 fdapace-0.5.0/fdapace/R/MakeResultFPCA.R | 33 - fdapace-0.5.0/fdapace/R/MakeSparseGP.R | 4 fdapace-0.5.0/fdapace/R/MgnJntDensity.R | 9 fdapace-0.5.0/fdapace/R/Minb.R | 2 fdapace-0.5.0/fdapace/R/MultiFAM.R | 45 - fdapace-0.5.0/fdapace/R/NWMgnReg.R | 2 fdapace-0.5.0/fdapace/R/NormCurveToArea.R | 2 fdapace-0.5.0/fdapace/R/NormKernel.R | 2 fdapace-0.5.0/fdapace/R/SBFCompUpdate.R | 2 fdapace-0.5.0/fdapace/R/SBFitting.R | 29 fdapace-0.5.0/fdapace/R/SelectK.R | 8 fdapace-0.5.0/fdapace/R/SetOptions.R | 19 fdapace-0.5.0/fdapace/R/Sparsify.R | 2 fdapace-0.5.0/fdapace/R/Stringing.R | 10 fdapace-0.5.0/fdapace/R/SubsetFPCA.R | 2 fdapace-0.5.0/fdapace/R/TVAM.R |only fdapace-0.5.0/fdapace/R/TruncateObs.R | 2 fdapace-0.5.0/fdapace/R/VCAM.R |only fdapace-0.5.0/fdapace/R/WFDA.R | 22 fdapace-0.5.0/fdapace/R/Wiener.R | 4 fdapace-0.5.0/fdapace/R/demeanFuc.R |only fdapace-0.5.0/fdapace/R/fitted.FPCA.R | 134 +++- fdapace-0.5.0/fdapace/R/fitted.FPCAder.R | 9 fdapace-0.5.0/fdapace/R/kCFC.R | 23 fdapace-0.5.0/fdapace/R/medfly25.R | 8 fdapace-0.5.0/fdapace/R/pkgname.R | 79 +- fdapace-0.5.0/fdapace/R/plot.FPCA.R | 8 fdapace-0.5.0/fdapace/R/predict.FPCA.R | 29 fdapace-0.5.0/fdapace/README.md |only fdapace-0.5.0/fdapace/build/vignette.rds |binary fdapace-0.5.0/fdapace/inst/doc/fdapaceVig.R | 1 fdapace-0.5.0/fdapace/inst/doc/fdapaceVig.Rmd | 7 fdapace-0.5.0/fdapace/inst/doc/fdapaceVig.html | 665 +++++++++++---------- fdapace-0.5.0/fdapace/man/BwNN.Rd | 4 fdapace-0.5.0/fdapace/man/CheckOptions.Rd | 2 fdapace-0.5.0/fdapace/man/ConvertSupport.Rd | 2 fdapace-0.5.0/fdapace/man/CreateBWPlot.Rd | 4 fdapace-0.5.0/fdapace/man/CreateCovPlot.Rd | 2 fdapace-0.5.0/fdapace/man/CreateDesignPlot.Rd | 12 fdapace-0.5.0/fdapace/man/CreateFuncBoxPlot.Rd | 11 fdapace-0.5.0/fdapace/man/CreateModeOfVarPlot.Rd | 8 fdapace-0.5.0/fdapace/man/CreateOutliersPlot.Rd | 9 fdapace-0.5.0/fdapace/man/CreatePathPlot.Rd | 2 fdapace-0.5.0/fdapace/man/CreateStringingPlot.Rd | 4 fdapace-0.5.0/fdapace/man/DynCorr.Rd |only fdapace-0.5.0/fdapace/man/Dyn_test.Rd |only fdapace-0.5.0/fdapace/man/FAM.Rd | 14 fdapace-0.5.0/fdapace/man/FCCor.Rd | 4 fdapace-0.5.0/fdapace/man/FCReg.Rd | 8 fdapace-0.5.0/fdapace/man/FClust.Rd | 12 fdapace-0.5.0/fdapace/man/FLM.Rd |only fdapace-0.5.0/fdapace/man/FOptDes.Rd | 3 fdapace-0.5.0/fdapace/man/FPCA.Rd | 24 fdapace-0.5.0/fdapace/man/FPCAder.Rd | 25 fdapace-0.5.0/fdapace/man/FPCquantile.Rd |only fdapace-0.5.0/fdapace/man/FSVD.Rd | 9 fdapace-0.5.0/fdapace/man/FVPA.Rd | 2 fdapace-0.5.0/fdapace/man/GetCrCorYX.Rd | 4 fdapace-0.5.0/fdapace/man/GetCrCorYZ.Rd | 4 fdapace-0.5.0/fdapace/man/GetCrCovYX.Rd | 4 fdapace-0.5.0/fdapace/man/GetCrCovYZ.Rd | 8 fdapace-0.5.0/fdapace/man/GetNormalisedSample.Rd | 2 fdapace-0.5.0/fdapace/man/Lwls1D.Rd | 2 fdapace-0.5.0/fdapace/man/Lwls2DDeriv.Rd | 4 fdapace-0.5.0/fdapace/man/MakeGPFunctionalData.Rd | 4 fdapace-0.5.0/fdapace/man/MakeHCtoZscore02y.Rd | 2 fdapace-0.5.0/fdapace/man/MakeLNtoZscore02y.Rd | 2 fdapace-0.5.0/fdapace/man/MakeSparseGP.Rd | 4 fdapace-0.5.0/fdapace/man/MultiFAM.Rd | 37 - fdapace-0.5.0/fdapace/man/NormCurvToArea.Rd | 2 fdapace-0.5.0/fdapace/man/SBFitting.Rd | 29 fdapace-0.5.0/fdapace/man/SelectK.Rd | 8 fdapace-0.5.0/fdapace/man/SetOptions.Rd | 2 fdapace-0.5.0/fdapace/man/Sparsify.Rd | 2 fdapace-0.5.0/fdapace/man/Stringing.Rd | 10 fdapace-0.5.0/fdapace/man/TVAM.Rd |only fdapace-0.5.0/fdapace/man/VCAM.Rd |only fdapace-0.5.0/fdapace/man/WFDA.Rd | 11 fdapace-0.5.0/fdapace/man/Wiener.Rd | 4 fdapace-0.5.0/fdapace/man/fdapace.Rd | 71 +- fdapace-0.5.0/fdapace/man/fitted.FPCA.Rd | 54 + fdapace-0.5.0/fdapace/man/fitted.FPCAder.Rd | 9 fdapace-0.5.0/fdapace/man/kCFC.Rd | 4 fdapace-0.5.0/fdapace/man/medfly25.Rd | 8 fdapace-0.5.0/fdapace/man/plot.FPCA.Rd | 6 fdapace-0.5.0/fdapace/man/predict.FPCA.Rd | 21 fdapace-0.5.0/fdapace/vignettes/fdapaceVig.Rmd | 7 148 files changed, 1472 insertions(+), 1000 deletions(-)
Title: Extensible, Parallelizable Implementation of the Random Forest
Algorithm
Description: Scalable implementation of classification and regression forests, as described by Breiman (2001), <DOI:10.1023/A:1010933404324>.
Author: Mark Seligman
Maintainer: Mark Seligman <mseligman@suiji.org>
Diff between Rborist versions 0.1-17 dated 2019-03-19 and 0.2-0 dated 2019-08-31
Rborist-0.1-17/Rborist/R/PreTrain.R |only Rborist-0.1-17/Rborist/R/PreTrain.default.R |only Rborist-0.1-17/Rborist/man/PreTrain.default.Rd |only Rborist-0.1-17/Rborist/src/bagBridge.cc |only Rborist-0.1-17/Rborist/src/bagBridge.h |only Rborist-0.1-17/Rborist/src/block.cc |only Rborist-0.1-17/Rborist/src/blockBridge.cc |only Rborist-0.1-17/Rborist/src/blockBridge.h |only Rborist-0.1-17/Rborist/src/exportBridge.cc |only Rborist-0.1-17/Rborist/src/exportBridge.h |only Rborist-0.1-17/Rborist/src/forestBridge.cc |only Rborist-0.1-17/Rborist/src/forestBridge.h |only Rborist-0.1-17/Rborist/src/framemap.cc |only Rborist-0.1-17/Rborist/src/framemapBridge.cc |only Rborist-0.1-17/Rborist/src/framemapBridge.h |only Rborist-0.1-17/Rborist/src/index.cc |only Rborist-0.1-17/Rborist/src/index.h |only Rborist-0.1-17/Rborist/src/leafBridge.cc |only Rborist-0.1-17/Rborist/src/leafBridge.h |only Rborist-0.1-17/Rborist/src/predictBridge.cc |only Rborist-0.1-17/Rborist/src/predictBridge.h |only Rborist-0.1-17/Rborist/src/rankedsetBridge.cc |only Rborist-0.1-17/Rborist/src/rankedsetBridge.h |only Rborist-0.1-17/Rborist/src/rowrank.cc |only Rborist-0.1-17/Rborist/src/samplepred.cc |only Rborist-0.1-17/Rborist/src/samplepred.h |only Rborist-0.1-17/Rborist/src/splitnode.cc |only Rborist-0.1-17/Rborist/src/splitnode.h |only Rborist-0.1-17/Rborist/src/trainBridge.cc |only Rborist-0.1-17/Rborist/src/trainBridge.h |only Rborist-0.2-0/Rborist/DESCRIPTION | 11 Rborist-0.2-0/Rborist/MD5 | 209 ++++--- Rborist-0.2-0/Rborist/NAMESPACE | 4 Rborist-0.2-0/Rborist/R/Export.Rborist.R |only Rborist-0.2-0/Rborist/R/ForestFloorExport.Rborist.R | 5 Rborist-0.2-0/Rborist/R/PreFormat.default.R | 23 Rborist-0.2-0/Rborist/R/Rborist.default.R | 25 Rborist-0.2-0/Rborist/R/Validate.R | 2 Rborist-0.2-0/Rborist/R/Validate.default.R | 32 - Rborist-0.2-0/Rborist/R/predict.Rborist.R | 18 Rborist-0.2-0/Rborist/inst/doc/rborist.R | 3 Rborist-0.2-0/Rborist/inst/doc/rborist.Rmd | 17 Rborist-0.2-0/Rborist/inst/doc/rborist.html | 15 Rborist-0.2-0/Rborist/man/Export.Rborist.Rd |only Rborist-0.2-0/Rborist/man/PreFormat.default.Rd | 2 Rborist-0.2-0/Rborist/man/Rborist.Rd | 10 Rborist-0.2-0/Rborist/man/Validate.Rd | 4 Rborist-0.2-0/Rborist/man/predict.Rborist.Rd | 11 Rborist-0.2-0/Rborist/src/Makevars | 2 Rborist-0.2-0/Rborist/src/bag.cc |only Rborist-0.2-0/Rborist/src/bag.h |only Rborist-0.2-0/Rborist/src/bagRf.cc |only Rborist-0.2-0/Rborist/src/bagRf.h |only Rborist-0.2-0/Rborist/src/bagbridge.cc |only Rborist-0.2-0/Rborist/src/bagbridge.h |only Rborist-0.2-0/Rborist/src/block.h | 331 ++++++----- Rborist-0.2-0/Rborist/src/blockbatch.cc |only Rborist-0.2-0/Rborist/src/blockbatch.h |only Rborist-0.2-0/Rborist/src/bottom.cc | 181 ++---- Rborist-0.2-0/Rborist/src/bottom.h | 124 +--- Rborist-0.2-0/Rborist/src/bv.cc | 65 -- Rborist-0.2-0/Rborist/src/bv.h | 185 ++++-- Rborist-0.2-0/Rborist/src/callback.cc | 8 Rborist-0.2-0/Rborist/src/callback.h | 8 Rborist-0.2-0/Rborist/src/coproc.h | 8 Rborist-0.2-0/Rborist/src/coprocrowrank.cc | 18 Rborist-0.2-0/Rborist/src/decnode.h | 71 ++ Rborist-0.2-0/Rborist/src/exportRf.cc |only Rborist-0.2-0/Rborist/src/exportRf.h |only Rborist-0.2-0/Rborist/src/forest.cc | 57 +- Rborist-0.2-0/Rborist/src/forest.h | 173 +++--- Rborist-0.2-0/Rborist/src/forestRf.cc |only Rborist-0.2-0/Rborist/src/forestRf.h |only Rborist-0.2-0/Rborist/src/forestbridge.cc |only Rborist-0.2-0/Rborist/src/forestbridge.h |only Rborist-0.2-0/Rborist/src/frame.cc |only Rborist-0.2-0/Rborist/src/frame.h |only Rborist-0.2-0/Rborist/src/framemap.h | 162 +---- Rborist-0.2-0/Rborist/src/frontier.cc |only Rborist-0.2-0/Rborist/src/frontier.h |only Rborist-0.2-0/Rborist/src/jagged.h | 6 Rborist-0.2-0/Rborist/src/leaf.cc | 81 +- Rborist-0.2-0/Rborist/src/leaf.h | 241 +++++--- Rborist-0.2-0/Rborist/src/leafRf.cc |only Rborist-0.2-0/Rborist/src/leafRf.h |only Rborist-0.2-0/Rborist/src/leafbridge.cc |only Rborist-0.2-0/Rborist/src/leafbridge.h |only Rborist-0.2-0/Rborist/src/level.cc | 249 ++++---- Rborist-0.2-0/Rborist/src/level.h | 254 +++------ Rborist-0.2-0/Rborist/src/obspart.cc |only Rborist-0.2-0/Rborist/src/obspart.h |only Rborist-0.2-0/Rborist/src/ompthread.cc | 4 Rborist-0.2-0/Rborist/src/ompthread.h | 5 Rborist-0.2-0/Rborist/src/path.cc | 2 Rborist-0.2-0/Rborist/src/path.h | 76 +- Rborist-0.2-0/Rborist/src/predict.cc | 230 ++++---- Rborist-0.2-0/Rborist/src/predict.h | 279 ++++++--- Rborist-0.2-0/Rborist/src/predictRf.cc |only Rborist-0.2-0/Rborist/src/predictRf.h |only Rborist-0.2-0/Rborist/src/predictbridge.cc |only Rborist-0.2-0/Rborist/src/predictbridge.h |only Rborist-0.2-0/Rborist/src/pretree.cc | 197 +------ Rborist-0.2-0/Rborist/src/pretree.h | 179 +++--- Rborist-0.2-0/Rborist/src/ptnode.h |only Rborist-0.2-0/Rborist/src/quant.cc | 242 +++----- Rborist-0.2-0/Rborist/src/quant.h | 178 ++---- Rborist-0.2-0/Rborist/src/rankedframe.cc |only Rborist-0.2-0/Rborist/src/rankedframe.h |only Rborist-0.2-0/Rborist/src/rcppInit.cc | 8 Rborist-0.2-0/Rborist/src/rcppInit.h | 8 Rborist-0.2-0/Rborist/src/rle.h |only Rborist-0.2-0/Rborist/src/rleframe.cc |only Rborist-0.2-0/Rborist/src/rleframe.h |only Rborist-0.2-0/Rborist/src/rleframeR.cc |only Rborist-0.2-0/Rborist/src/rleframeR.h |only Rborist-0.2-0/Rborist/src/rowSample.cc | 8 Rborist-0.2-0/Rborist/src/rowSample.h | 8 Rborist-0.2-0/Rborist/src/rowrank.h | 494 ----------------- Rborist-0.2-0/Rborist/src/runset.cc | 137 ++-- Rborist-0.2-0/Rborist/src/runset.h | 258 ++++----- Rborist-0.2-0/Rborist/src/sample.cc | 48 - Rborist-0.2-0/Rborist/src/sample.h | 110 +-- Rborist-0.2-0/Rborist/src/samplenux.cc | 9 Rborist-0.2-0/Rborist/src/samplenux.h | 50 + Rborist-0.2-0/Rborist/src/signatureRf.cc |only Rborist-0.2-0/Rborist/src/signatureRf.h |only Rborist-0.2-0/Rborist/src/splitaccum.cc |only Rborist-0.2-0/Rborist/src/splitaccum.h |only Rborist-0.2-0/Rborist/src/splitcand.cc | 526 +++--------------- Rborist-0.2-0/Rborist/src/splitcand.h | 559 +++----------------- Rborist-0.2-0/Rborist/src/splitcoord.h |only Rborist-0.2-0/Rborist/src/splitfrontier.cc |only Rborist-0.2-0/Rborist/src/splitfrontier.h |only Rborist-0.2-0/Rborist/src/splitnux.cc |only Rborist-0.2-0/Rborist/src/splitnux.h |only Rborist-0.2-0/Rborist/src/sumcount.h |only Rborist-0.2-0/Rborist/src/summaryframe.cc |only Rborist-0.2-0/Rborist/src/summaryframe.h |only Rborist-0.2-0/Rborist/src/train.cc | 115 +--- Rborist-0.2-0/Rborist/src/train.h | 34 - Rborist-0.2-0/Rborist/src/trainRf.cc |only Rborist-0.2-0/Rborist/src/trainRf.h |only Rborist-0.2-0/Rborist/src/trainbridge.cc |only Rborist-0.2-0/Rborist/src/trainbridge.h |only Rborist-0.2-0/Rborist/src/typeparam.h | 76 ++ Rborist-0.2-0/Rborist/src/valrank.h |only Rborist-0.2-0/Rborist/tests/testthat/test-regNum.R | 17 Rborist-0.2-0/Rborist/vignettes/rborist.Rmd | 17 148 files changed, 2681 insertions(+), 3808 deletions(-)
Title: Design of Risk Parity Portfolios
Description: Fast design of risk parity portfolios for financial investment.
The goal of the risk parity portfolio formulation is to equalize or distribute
the risk contributions of the different assets, which is missing if we simply
consider the overall volatility of the portfolio as in the mean-variance
Markowitz portfolio. In addition to the vanilla formulation, where the risk
contributions are perfectly equalized subject to no shortselling and budget
constraints, many other formulations are considered that allow for box
constraints and shortselling, as well as the inclusion of additional
objectives like the expected return and overall variance. See vignette for
a detailed documentation and comparison, with several illustrative examples.
The package is based on the papers:
Y. Feng, and D. P. Palomar (2015). SCRIP: Successive Convex Optimization Methods
for Risk Parity Portfolio Design. IEEE Trans. on Signal Processing, vol. 63,
no. 19, pp. 5285-5300. <doi:10.1109/TSP.2015.2452219>.
F. Spinu (2013), An Algorithm for Computing Risk Parity Weights.
<doi:10.2139/ssrn.2297383>.
T. Griveau-Billion, J. Richard, and T. Roncalli (2013). A fast algorithm for computing
High-dimensional risk parity portfolios. <arXiv:1311.4057>.
Author: Ze Vinicius [aut],
Daniel P. Palomar [cre, aut]
Maintainer: Daniel P. Palomar <daniel.p.palomar@gmail.com>
Diff between riskParityPortfolio versions 0.1.2 dated 2019-06-01 and 0.2.0 dated 2019-08-31
riskParityPortfolio-0.1.2/riskParityPortfolio/inst/doc/RiskParityPortfolio-pdf.pdf |only riskParityPortfolio-0.1.2/riskParityPortfolio/inst/doc/RiskParityPortfolio-pdf.pdf.asis |only riskParityPortfolio-0.1.2/riskParityPortfolio/tests/testthat/test-boxConstraints.R |only riskParityPortfolio-0.1.2/riskParityPortfolio/vignettes/RiskParityPortfolio-pdf.pdf.asis |only riskParityPortfolio-0.2.0/riskParityPortfolio/DESCRIPTION | 14 riskParityPortfolio-0.2.0/riskParityPortfolio/MD5 | 60 riskParityPortfolio-0.2.0/riskParityPortfolio/NAMESPACE | 1 riskParityPortfolio-0.2.0/riskParityPortfolio/NEWS.md | 10 riskParityPortfolio-0.2.0/riskParityPortfolio/R/RcppExports.R | 12 riskParityPortfolio-0.2.0/riskParityPortfolio/R/genSolver.R |only riskParityPortfolio-0.2.0/riskParityPortfolio/R/plotting.R |only riskParityPortfolio-0.2.0/riskParityPortfolio/R/riskParityPortfolio-package.R | 10 riskParityPortfolio-0.2.0/riskParityPortfolio/R/riskParityPortfolio.R | 556 ++--- riskParityPortfolio-0.2.0/riskParityPortfolio/R/rppWithConstraints.R |only riskParityPortfolio-0.2.0/riskParityPortfolio/README.md | 232 -- riskParityPortfolio-0.2.0/riskParityPortfolio/build/vignette.rds |binary riskParityPortfolio-0.2.0/riskParityPortfolio/inst/CITATION | 4 riskParityPortfolio-0.2.0/riskParityPortfolio/inst/doc/RiskParityPortfolio.html | 993 ++++------ riskParityPortfolio-0.2.0/riskParityPortfolio/inst/doc/RiskParityPortfolio.html.asis | 2 riskParityPortfolio-0.2.0/riskParityPortfolio/inst/doc/slides-ConvexOptimizationCourseHKUST.pdf |only riskParityPortfolio-0.2.0/riskParityPortfolio/inst/doc/slides-ConvexOptimizationCourseHKUST.pdf.asis |only riskParityPortfolio-0.2.0/riskParityPortfolio/inst/doc/slides-RFinance2019.pdf |only riskParityPortfolio-0.2.0/riskParityPortfolio/inst/doc/slides-RFinance2019.pdf.asis |only riskParityPortfolio-0.2.0/riskParityPortfolio/man/barplotPortfolioRisk.Rd |only riskParityPortfolio-0.2.0/riskParityPortfolio/man/riskParityPortfolio-package.Rd | 10 riskParityPortfolio-0.2.0/riskParityPortfolio/man/riskParityPortfolio.Rd | 124 - riskParityPortfolio-0.2.0/riskParityPortfolio/src/RcppExports.cpp | 53 riskParityPortfolio-0.2.0/riskParityPortfolio/src/risk_parity_with_constraints.cc |only riskParityPortfolio-0.2.0/riskParityPortfolio/src/risk_parity_with_constraints.h |only riskParityPortfolio-0.2.0/riskParityPortfolio/tests/testthat/test-Constraints.R |only riskParityPortfolio-0.2.0/riskParityPortfolio/tests/testthat/test-checks.R | 6 riskParityPortfolio-0.2.0/riskParityPortfolio/tests/testthat/test-meanReturn.R | 14 riskParityPortfolio-0.2.0/riskParityPortfolio/tests/testthat/test-newton-cyclical.R | 8 riskParityPortfolio-0.2.0/riskParityPortfolio/tests/testthat/test-point-feasibility.R | 13 riskParityPortfolio-0.2.0/riskParityPortfolio/tests/testthat/test-pyrb.R |only riskParityPortfolio-0.2.0/riskParityPortfolio/tests/testthat/test-riskFormulationsGradients.R | 32 riskParityPortfolio-0.2.0/riskParityPortfolio/vignettes/RFinance2019-slides.pdf |only riskParityPortfolio-0.2.0/riskParityPortfolio/vignettes/RiskParityPortfolio.html.asis | 2 riskParityPortfolio-0.2.0/riskParityPortfolio/vignettes/figures |only riskParityPortfolio-0.2.0/riskParityPortfolio/vignettes/slides-ConvexOptimizationCourseHKUST.pdf.asis |only riskParityPortfolio-0.2.0/riskParityPortfolio/vignettes/slides-RFinance2019.pdf.asis |only 41 files changed, 1078 insertions(+), 1078 deletions(-)
More information about riskParityPortfolio at CRAN
Permanent link
Title: Interface with Google Cloud Storage API
Description: Interact with Google Cloud Storage <https://cloud.google.com/storage/>
API in R. Part of the 'cloudyr' <https://cloudyr.github.io/> project.
Author: Mark Edmondson [aut, cre] (<https://orcid.org/0000-0002-8434-3881>)
Maintainer: Mark Edmondson <r@sunholo.com>
Diff between googleCloudStorageR versions 0.5.0 dated 2019-07-28 and 0.5.1 dated 2019-08-31
DESCRIPTION | 13 MD5 | 37 +- NEWS.md | 9 R/acl.R | 33 ++ R/compose.R | 4 R/download.R | 12 R/objects.R | 2 R/print-method.R | 1 R/pubsub.R | 29 +- R/rsession.R | 4 R/versioning.R | 32 ++ inst/doc/googleCloudStorageR.html | 37 ++ inst/secret |only man/gcs_create_pubsub.Rd | 2 man/gcs_delete_pubsub.Rd | 5 man/gcs_get_bucket_acl.Rd | 12 man/gcs_get_object_acl.Rd | 22 + man/gcs_save_all.Rd | 2 man/gcs_version_bucket.Rd | 26 + tests/testthat/test-gcs.R | 496 +++++++++++++++++++++++++++++++++++++- 20 files changed, 716 insertions(+), 62 deletions(-)
More information about googleCloudStorageR at CRAN
Permanent link
Title: Joint Analysis and Imputation of Incomplete Data
Description: Provides joint analysis and imputation of (generalized)
linear and cumulative logit regression models, (generalized) linear and
cumulative logit mixed models and parametric (Weibull) as well as Cox
proportional hazards survival models with incomplete (covariate) data in
the Bayesian framework.
The package performs some preprocessing of the data and creates a 'JAGS'
model, which will then automatically be passed to 'JAGS'
<http://mcmc-jags.sourceforge.net> with the help of
the package 'rjags'.
It also provides summary and plotting functions for the output and allows
the user to export imputed values.
Author: Nicole S. Erler [aut, cre] (<https://orcid.org/0000-0002-9370-6832>)
Maintainer: Nicole S. Erler <n.erler@erasmusmc.nl>
Diff between JointAI versions 0.5.2 dated 2019-06-06 and 0.6.0 dated 2019-08-31
DESCRIPTION | 13 MD5 | 179 +++---- NAMESPACE | 5 NEWS.md | 65 ++ R/JointAI.R | 87 ++- R/JointAIObject.R | 16 R/add_samples.R | 35 - R/analysismodel_glm.R | 7 R/analysismodel_glme.R | 13 R/analysismodel_surv.R | 67 ++ R/build_model.R | 5 R/convergence_criteria.R | 30 - R/divide_matrices.R | 25 R/get_MIdat.R | 28 - R/get_data_list.R | 126 ++--- R/get_imp_method.R | 76 +-- R/get_model_dimensions.R | 11 R/get_params.R | 16 R/get_refs.R | 23 R/get_subset.R | 11 R/helpfunctions.R | 55 ++ R/helpfunctions_JAGSmodel.R | 2 R/helpfunctions_prep_impmodels.R | 25 R/helpfunctions_summary.R | 23 R/impmodel_glme.R | 20 R/md_pattern.R | 12 R/methods.R |only R/model_imp.R | 297 ++++++----- R/plot_imp_distr.R | 11 R/plots.R | 45 + R/predict.R | 164 +++++- R/print_functions.R | 105 ++-- R/scaling.R | 6 R/simLong.R | 4 R/summary.JointAI.R | 24 build/vignette.rds |binary inst/CITATION |only inst/doc/AfterFitting.R | 45 + inst/doc/AfterFitting.Rmd | 95 ++- inst/doc/AfterFitting.html | 581 +++++++++++------------ inst/doc/MCMCsettings.Rmd | 27 - inst/doc/MCMCsettings.html | 430 ++++++++--------- inst/doc/MinimalExample.R | 3 inst/doc/MinimalExample.Rmd | 6 inst/doc/MinimalExample.html | 126 ++--- inst/doc/ModelSpecification.R | 37 - inst/doc/ModelSpecification.Rmd | 154 +++--- inst/doc/ModelSpecification.html | 778 +++++++++++++++---------------- inst/doc/SelectingParameters.R | 4 inst/doc/SelectingParameters.Rmd | 34 - inst/doc/SelectingParameters.html | 544 ++++++++++----------- inst/doc/TheoreticalBackground.R |only inst/doc/TheoreticalBackground.Rmd |only inst/doc/TheoreticalBackground.html |only inst/doc/VisualizingIncompleteData.R | 13 inst/doc/VisualizingIncompleteData.Rmd | 16 inst/doc/VisualizingIncompleteData.html | 103 ++-- man/GR_crit.Rd | 20 man/JointAI.Rd | 44 + man/JointAIObject.Rd | 16 man/MC_error.Rd | 25 man/add_samples.Rd | 42 + man/default_hyperpars.Rd | 17 man/densplot.Rd | 30 - man/figures/README-unnamed-chunk-2-1.png |binary man/figures/README-unnamed-chunk-3-1.png |binary man/figures/README-unnamed-chunk-4-1.png |binary man/figures/README-unnamed-chunk-5-1.png |binary man/figures/logo.png |only man/get_MIdat.Rd | 26 - man/get_models.Rd | 34 - man/list_models.Rd | 36 - man/md_pattern.Rd | 12 man/model_imp.Rd | 164 +++--- man/parameters.Rd | 10 man/plot.JointAI.Rd |only man/plot_all.Rd | 7 man/plot_imp_distr.Rd | 11 man/predDF.Rd | 14 man/predict.JointAI.Rd | 53 +- man/residuals.JointAI.Rd |only man/set_refcat.Rd | 15 man/sharedParams.Rd | 32 - man/simLong.Rd | 4 man/summary.JointAI.Rd | 24 man/traceplot.Rd | 23 tests/testthat/test_bugfixes.R | 10 tests/testthat/test_imp_models.R | 7 vignettes/AfterFitting.Rmd | 95 ++- vignettes/MCMCsettings.Rmd | 27 - vignettes/MinimalExample.Rmd | 6 vignettes/ModelSpecification.Rmd | 154 +++--- vignettes/SelectingParameters.Rmd | 34 - vignettes/TheoreticalBackground.Rmd |only vignettes/VisualizingIncompleteData.Rmd | 16 95 files changed, 3190 insertions(+), 2445 deletions(-)
Title: Heterogeneous Autoregressive Models
Description: Estimation, simulation, and forecasting using the HAR model from Corsi(2009) <DOI:10.1093/jjfinec/nbp001> and extensions.
Author: Emil Sjoerup
Maintainer: Emil Sjoerup <emilsjoerup@live.dk>
Diff between HARModel versions 0.2 dated 2019-01-24 and 1.0 dated 2019-08-31
ChangeLog | 26 + DESCRIPTION | 11 MD5 | 46 +- NAMESPACE | 7 R/ClassMethods.R | 212 +++++++---- R/HARForecast.R | 884 +++++++++++++++++++++++++++++++---------------- R/HARSimulate.R | 25 - R/HARestimate.R | 537 ++++++++++++---------------- R/RcppExports.R | 12 build/partial.rdb |binary man/HARForecast-class.Rd | 31 + man/HARModel-class.Rd | 37 + man/HARSim-class.Rd | 14 man/HARestimate.Rd | 92 +++- man/HARforecast.Rd | 96 +++-- man/HARsimulate.Rd | 39 -- src/HARDataCreationC.cpp | 61 ++- src/HARDataCreationC.h | 2 src/HARSimC.cpp | 8 src/Makevars | 2 src/Makevars.win | 4 src/RcppExports.cpp | 32 + src/fastlmcoef.cpp | 2 tests |only 24 files changed, 1316 insertions(+), 864 deletions(-)
Title: Parallel Analysis and Non Graphical Solutions to the Cattell
Scree Test
Description: Indices, heuristics and strategies to help determine the number of factors/components to retain:
1. Acceleration factor (af with or without Parallel Analysis);
2. Optimal Coordinates (noc with or without Parallel Analysis);
3. Parallel analysis (components, factors and bootstrap);
4. lambda > mean(lambda) (Kaiser, CFA and related);
5. Cattell-Nelson-Gorsuch (CNG);
6. Zoski and Jurs multiple regression (b, t and p);
7. Zoski and Jurs standard error of the regression coeffcient (sescree);
8. Nelson R2;
9. Bartlett khi-2;
10. Anderson khi-2;
11. Lawley khi-2 and
12. Bentler-Yuan khi-2.
Author: Gilles Raiche (Universite du Quebec a Montreal) and David Magis (Universite de Liege)
Maintainer: Gilles Raiche <raiche.gilles@uqam.ca>
Diff between nFactors versions 2.3.3 dated 2011-12-20 and 2.3.3.1 dated 2019-08-31
DESCRIPTION | 7 ++++--- MD5 | 6 +++--- data/dFactors.rda |binary inst/CITATION | 6 +++--- 4 files changed, 10 insertions(+), 9 deletions(-)
Title: Probabilistic Latent Variable Models for Metabolomic Data
Description: Fits probabilistic principal components analysis,
probabilistic principal components and covariates analysis and
mixtures of probabilistic principal components models to
metabolomic spectral data.
Author: Nyamundanda Gift, Isobel Claire Gormley and Lorraine Brennan.
Maintainer: Claire Gormley <claire.gormley@ucd.ie>
Diff between MetabolAnalyze versions 1.3 dated 2012-08-29 and 1.3.1 dated 2019-08-31
DESCRIPTION | 9 +++++---- MD5 | 12 ++++++------ NAMESPACE | 27 ++++++++++++++++++++------- data/BrainSpectra.rda |binary data/UrineSpectra.rda |binary inst/CITATION | 5 ++--- man/ht.Rd | 8 +++++++- 7 files changed, 40 insertions(+), 21 deletions(-)
More information about MetabolAnalyze at CRAN
Permanent link
Title: Hypothesis Testing and Power Calculations for Comparing
Metagenomic Samples from HMP
Description: Using Dirichlet-Multinomial distribution to provide several functions for formal hypothesis testing, power and sample size calculations for human microbiome experiments.
Author: Patricio S. La Rosa, Elena Deych, Sharina Carter, Berkley Shands, Dake Yang, William D. Shannon
Maintainer: Berkley Shands <rpackages@biorankings.com>
Diff between HMP versions 2.0 dated 2019-08-26 and 2.0.1 dated 2019-08-31
DESCRIPTION | 8 ++-- MD5 | 12 ++++--- inst/doc/DMRP_Paper.R | 79 ++++++++++++++++++++++------------------------- inst/doc/DMRP_Paper.Rnw | 29 +++++++++++------ inst/doc/DMRP_Paper.pdf |binary vignettes/DMRP_Paper.Rnw | 29 +++++++++++------ vignettes/figure1.png |only vignettes/figure2.png |only 8 files changed, 87 insertions(+), 70 deletions(-)
Title: Authenticate and Create Google APIs
Description: Create R functions that interact with OAuth2 Google APIs
<https://developers.google.com/apis-explorer/> easily,
with auto-refresh and Shiny compatibility.
Author: Mark Edmondson [aut, cre] (<https://orcid.org/0000-0002-8434-3881>),
Jennifer Bryan [ctb],
Johann deBoer [ctb],
Neal Richardson [ctb],
David Kulp [ctb],
Joe Cheng [ctb]
Maintainer: Mark Edmondson <m@sunholo.com>
Diff between googleAuthR versions 0.8.1 dated 2019-07-08 and 1.0.0 dated 2019-08-31
googleAuthR-0.8.1/googleAuthR/inst/jupyter |only googleAuthR-0.8.1/googleAuthR/inst/server_side_auth_function/rsconnect |only googleAuthR-0.8.1/googleAuthR/man/Authentication.Rd |only googleAuthR-0.8.1/googleAuthR/tests |only googleAuthR-1.0.0/googleAuthR/DESCRIPTION | 15 googleAuthR-1.0.0/googleAuthR/MD5 | 84 googleAuthR-1.0.0/googleAuthR/NAMESPACE | 16 googleAuthR-1.0.0/googleAuthR/NEWS.md | 9 googleAuthR-1.0.0/googleAuthR/R/auth.R | 410 +--- googleAuthR-1.0.0/googleAuthR/R/auth_gargle.R |only googleAuthR-1.0.0/googleAuthR/R/auth_legacy.R |only googleAuthR-1.0.0/googleAuthR/R/auto_auth.R | 77 googleAuthR-1.0.0/googleAuthR/R/checks.R | 14 googleAuthR-1.0.0/googleAuthR/R/gce.R | 76 googleAuthR-1.0.0/googleAuthR/R/generator.R | 28 googleAuthR-1.0.0/googleAuthR/R/options.R | 7 googleAuthR-1.0.0/googleAuthR/R/set_client.R | 31 googleAuthR-1.0.0/googleAuthR/R/shiny-auth.R | 3 googleAuthR-1.0.0/googleAuthR/R/shiny-js-signin.R | 20 googleAuthR-1.0.0/googleAuthR/build/vignette.rds |binary googleAuthR-1.0.0/googleAuthR/inst/doc/advanced-building.Rmd | 35 googleAuthR-1.0.0/googleAuthR/inst/doc/advanced-building.html | 844 ++++++--- googleAuthR-1.0.0/googleAuthR/inst/doc/building.html | 751 +++++--- googleAuthR-1.0.0/googleAuthR/inst/doc/google-authentication-types.html | 881 ++++++---- googleAuthR-1.0.0/googleAuthR/inst/doc/setup.html | 325 +++ googleAuthR-1.0.0/googleAuthR/inst/doc/troubleshooting.html | 329 +++ googleAuthR-1.0.0/googleAuthR/inst/js/signin-bottom.js | 5 googleAuthR-1.0.0/googleAuthR/man/gar_api_generator.Rd | 25 googleAuthR-1.0.0/googleAuthR/man/gar_auth.Rd | 86 googleAuthR-1.0.0/googleAuthR/man/gar_auth_configure.Rd |only googleAuthR-1.0.0/googleAuthR/man/gar_auto_auth.Rd | 10 googleAuthR-1.0.0/googleAuthR/man/gar_check_existing_token.Rd | 2 googleAuthR-1.0.0/googleAuthR/man/gar_deauth.Rd |only googleAuthR-1.0.0/googleAuthR/man/gar_gce_auth.Rd | 9 googleAuthR-1.0.0/googleAuthR/man/gar_gce_auth_default.Rd | 6 googleAuthR-1.0.0/googleAuthR/man/gar_has_token.Rd |only googleAuthR-1.0.0/googleAuthR/man/gar_set_client.Rd | 8 googleAuthR-1.0.0/googleAuthR/man/gar_token.Rd |only googleAuthR-1.0.0/googleAuthR/man/googleSignIn.Rd | 7 googleAuthR-1.0.0/googleAuthR/man/googleSignInUI.Rd | 9 googleAuthR-1.0.0/googleAuthR/vignettes/advanced-building.Rmd | 35 41 files changed, 2601 insertions(+), 1556 deletions(-)
Title: Model Audit - Verification, Validation, and Error Analysis
Description: Provides an easy to use unified interface for creating validation plots for any model.
The 'auditor' helps to avoid repetitive work consisting of writing code needed to create residual plots.
This visualizations allow to asses and compare the goodness of fit, performance, and similarity of models.
Author: Alicja Gosiewska [aut, cre] (<https://orcid.org/0000-0001-6563-5742>),
Przemyslaw Biecek [aut, ths] (<https://orcid.org/0000-0001-8423-1823>),
Hubert Baniecki [aut],
Tomasz Mikołajczyk [aut],
Michal Burdukiewicz [ctb]
Maintainer: Alicja Gosiewska <alicjagosiewska@gmail.com>
Diff between auditor versions 0.3.1 dated 2018-09-19 and 1.0.0 dated 2019-08-31
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Title: Tools for Storing, Restoring and Searching for R Objects
Description: Data exploration and modelling is a process in which a lot of data
artifacts are produced. Artifacts like: subsets, data aggregates, plots,
statistical models, different versions of data sets and different versions
of results. The more projects we work with the more artifacts are produced
and the harder it is to manage these artifacts. Archivist helps to store
and manage artifacts created in R. Archivist allows you to store selected
artifacts as a binary files together with their metadata and relations.
Archivist allows to share artifacts with others, either through shared
folder or github. Archivist allows to look for already created artifacts by
using it's class, name, date of the creation or other properties. Makes it
easy to restore such artifacts. Archivist allows to check if new artifact
is the exact copy that was produced some time ago. That might be useful
either for testing or caching.
Author: Przemyslaw Biecek [aut, cre],
Marcin Kosinski [aut],
Witold Chodor [ctb]
Maintainer: Przemyslaw Biecek <przemyslaw.biecek@gmail.com>
Diff between archivist versions 2.3.2 dated 2019-01-02 and 2.3.4 dated 2019-08-31
DESCRIPTION | 6 MD5 | 108 ++--- NAMESPACE | 166 ++++---- NEWS.md | 458 +++++++++++------------ R/ahistory.R | 367 +++++++++--------- R/archivist-package.R | 167 ++++---- R/asearch.R | 2 R/atrace.R | 69 +-- R/saveToRepo.R | 554 +++++++++++++-------------- build/vignette.rds |binary inst/doc/accessibility.R | 178 ++++---- inst/doc/accessibility.html | 636 ++++++++++++++++---------------- inst/doc/caching.R | 116 ++--- inst/doc/caching.html | 598 +++++++++++++++--------------- inst/doc/chaining.R | 182 ++++----- inst/doc/chaining.html | 730 ++++++++++++++++++------------------ inst/doc/posts.html | 396 +++++++++---------- man/Repository.Rd | 250 ++++++------ man/Tags.Rd | 874 ++++++++++++++++++++++---------------------- man/addHooksToPrint.Rd | 190 ++++----- man/addTagsRepo.Rd | 272 ++++++------- man/aformat.Rd | 154 +++---- man/ahistory.Rd | 251 ++++++------ man/alink.Rd | 202 +++++----- man/archivist-package.Rd | 169 ++++---- man/archivistOptions.Rd | 294 +++++++------- man/aread.Rd | 178 ++++---- man/areadLocal.Rd | 128 +++--- man/asearch.Rd | 316 +++++++-------- man/asearchLocal.Rd | 142 +++---- man/asession.Rd | 156 +++---- man/atrace.Rd | 145 +++---- man/cache.Rd | 262 ++++++------- man/copyToRepo.Rd | 374 +++++++++--------- man/createEmptyRepo.Rd | 362 +++++++++--------- man/createMDGallery.Rd | 210 +++++----- man/deleteLocalRepo.Rd | 230 +++++------ man/getRemoteHook.Rd | 146 +++---- man/getTags.Rd | 410 ++++++++++---------- man/loadFromRepo.Rd | 454 +++++++++++----------- man/magrittr.Rd | 202 +++++----- man/md5hash.Rd | 176 ++++---- man/pipe.Rd | 24 - man/removeTagsRepo.Rd | 184 ++++----- man/restoreLibs.Rd | 168 ++++---- man/rmFromLocalRepo.Rd | 782 +++++++++++++++++++-------------------- man/saveToRepo.Rd | 440 +++++++++++----------- man/searchInRepo.Rd | 456 +++++++++++----------- man/setRepo.Rd | 440 +++++++++++----------- man/shinySearchInRepo.Rd | 194 ++++----- man/showRepo.Rd | 304 +++++++-------- man/splitTags.Rd | 256 ++++++------ man/summaryRepo.Rd | 216 +++++----- man/zipRepo.Rd | 342 ++++++++--------- vignettes/posts.Rmd | 62 +-- 55 files changed, 7574 insertions(+), 7574 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2010-12-12 0.2.0
2010-10-21 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2012-05-16 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-03-14 0.9.1
2013-04-25 0.9.0
2012-06-14 0.8-2
2012-02-04 0.8-1
2011-10-10 0.8-0
2011-02-20 0.7-6
2010-10-26 0.7-2
2009-04-16 0.6-4
2009-01-16 0.6-2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-07-22 1.1.0
2012-06-14 1.0.6
2012-04-17 1.0.5
2011-11-30 1.0.4
2011-11-24 1.0.3
2010-08-25 1.0.1
2010-02-16 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2011-07-27 0.2
2010-07-08 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2012-10-04 1.3
2012-02-27 1.2
2011-11-18 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-07-30 0.1.0
2018-04-13 0.0.2
2018-02-22 0.0.1
Title: Interface to 'Kusto'/'Azure Data Explorer'
Description: An interface to 'Azure Data Explorer', also known as 'Kusto', a fast, highly scalable data exploration service from Microsoft: <https://azure.microsoft.com/en-us/services/data-explorer/>. Includes 'DBI' and 'dplyr' interfaces, with the latter modelled after the 'dbplyr' package, whereby queries are translated from R into the native 'KQL' query language and executed lazily. On the admin side, the package extends the object framework provided by 'AzureRMR' to support creation and deletion of databases, and management of database principals. Part of the 'AzureR' family of packages.
Author: Hong Ooi [aut, cre],
Alex Kyllo [aut],
dbplyr development team [cph] (Original framework for dplyr/database
interface),
Microsoft [cph]
Maintainer: Hong Ooi <hongooi@microsoft.com>
Diff between AzureKusto versions 1.0.2 dated 2019-07-05 and 1.0.3 dated 2019-08-31
DESCRIPTION | 6 +-- MD5 | 25 ++++++------- NEWS.md | 4 ++ R/dbi.R | 2 - R/endpoint.R | 6 +-- R/ingest.R | 4 +- R/kql-build.R | 4 +- R/ops.R | 4 +- R/partial_eval.R | 10 ++--- R/query.R | 6 +-- README.md | 10 ++--- build/vignette.rds |binary man/figures |only tests/testthat/test_translate.r | 76 +++++++++++++++++++++++++--------------- 14 files changed, 91 insertions(+), 66 deletions(-)
Title: Truncated Multivariate Normal and Student Distributions
Description: A collection of functions to deal with the truncated univariate and multivariate normal and Student distributions, described in Botev (2017) <doi:10.1111/rssb.12162> and Botev and L'Ecuyer (2015) <doi:10.1109/WSC.2015.7408180>.
Author: Zdravko Botev [aut] (<https://orcid.org/0000-0001-9054-3452>),
Leo Belzile [aut, cre] (<https://orcid.org/0000-0002-9135-014X>)
Maintainer: Leo Belzile <belzilel@gmail.com>
Diff between TruncatedNormal versions 2.0 dated 2019-06-10 and 2.1 dated 2019-08-31
DESCRIPTION | 10 ++--- MD5 | 38 ++++++++++---------- NAMESPACE | 2 - NEWS | 8 +++- R/RcppExports.R | 2 - R/mvTcdf.R | 2 - R/mvnprqmc.R | 8 ++-- R/mvrandn.R | 6 +-- R/mvtprqmc.R | 8 ++-- R/tmvnorm.R | 57 ++++++++++++++++++++++++++++-- R/tmvt.R | 35 +++++++++++++++++- build/vignette.rds |binary inst/doc/TruncatedNormal_vignette.R | 2 - inst/doc/TruncatedNormal_vignette.Rmd | 10 ++--- inst/doc/TruncatedNormal_vignette.html | 62 +++++++++++++++++---------------- man/lnNpr.Rd | 2 - man/mvrandn.Rd | 4 +- man/tmvnorm.Rd | 25 +++++++++++++ src/lnNpr_cholperm_Phinv.cpp | 13 ++++-- vignettes/TruncatedNormal_vignette.Rmd | 10 ++--- 20 files changed, 213 insertions(+), 91 deletions(-)
More information about TruncatedNormal at CRAN
Permanent link
Title: Adding Progress Bar to '*apply' Functions
Description: A lightweight package that adds
progress bar to vectorized R functions
('*apply'). The implementation can easily be added
to functions where showing the progress is
useful (e.g. bootstrap). The type and style of the
progress bar (with percentages or remaining time)
can be set through options.
Supports several parallel processing backends.
Author: Peter Solymos [aut, cre], Zygmunt Zawadzki [aut]
Maintainer: Peter Solymos <solymos@ualberta.ca>
Diff between pbapply versions 1.4-1 dated 2019-07-15 and 1.4-2 dated 2019-08-31
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- NAMESPACE | 3 ++- R/pbmapply.R | 13 ++++++++----- R/timerProgressBar.R | 6 +++--- 5 files changed, 21 insertions(+), 17 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-08-23 0.50