Mon, 16 Dec 2019

Package gtsummary updated to version 1.2.4 with previous version 1.2.3 dated 2019-11-12

Title: Presentation-Ready Data Summary and Analytic Result Tables
Description: Creates presentation-ready tables summarizing data sets, regression models, and more. The code to create the tables is concise and highly customizable. Data frames can be summarized with any function, e.g. mean(), median(), even user-written functions. Regression models are summarized and include the reference rows for categorical variables. Common regression models, such as logistic regression and Cox proportional hazards regression, are automatically identified and the tables are pre-filled with appropriate column headers. The package is enhanced when the 'gt' package is installed. Use this code to install: 'remotes::install_github("rstudio/gt")'.
Author: Daniel D. Sjoberg [aut, cre] (<https://orcid.org/0000-0003-0862-2018>), Margie Hannum [aut] (<https://orcid.org/0000-0002-2953-0449>), Karissa Whiting [aut] (<https://orcid.org/0000-0002-4683-1868>), Emily C. Zabor [aut] (<https://orcid.org/0000-0002-1402-4498>), Michael Curry [ctb] (<https://orcid.org/0000-0002-0261-4044>), Esther Drill [ctb] (<https://orcid.org/0000-0002-3315-4538>), Jessica Flynn [ctb] (<https://orcid.org/0000-0001-8310-6684>)
Maintainer: Daniel D. Sjoberg <danield.sjoberg@gmail.com>

Diff between gtsummary versions 1.2.3 dated 2019-11-12 and 1.2.4 dated 2019-12-16

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More information about gtsummary at CRAN
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Package predkmeans updated to version 0.1.1 with previous version 0.1.0 dated 2017-11-09

Title: Covariate Adaptive Clustering
Description: Implements the predictive k-means method for clustering observations, using a mixture of experts model to allow covariates to influence cluster centers. Motivated by air pollution epidemiology settings, where cluster membership needs to be predicted across space. Includes functions for predicting cluster membership using spatial splines and principal component analysis (PCA) scores using either multinomial logistic regression or support vector machines (SVMs). For method details see Keller et al. (2017) <doi:10.1214/16-AOAS992>.
Author: Joshua Keller
Maintainer: Joshua Keller <joshua.keller@colostate.edu>

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More information about predkmeans at CRAN
Permanent link

Package plothelper updated to version 0.1.6 with previous version 0.1.5 dated 2019-11-16

Title: New Plots Based on 'ggplot2' and Functions to Create Regular Shapes
Description: An extension to 'ggplot2' with miscellaneous functions. It contains two groups of functions: Functions in the first group draw 'ggplot2' - based plots: gg_shading_bar() draws barplot with shading colors in each bar. geom_rect_cm(), geom_circle_cm() and geom_ellipse_cm() draw rectangles, circles and ellipses with centimeter as their unit. Thus their sizes do not change when the coordinate system or the aspect ratio changes. annotation_transparent_text() draws labels with transparent texts. annotation_shading_polygon() draws irregular polygons with shading colors. Functions in the second group generate coordinates for regular shapes and make linear transformations.
Author: Jiang Wu [aut, cre] (from Capital Normal University)
Maintainer: Jiang Wu <textidea@sina.com>

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Package madrat updated to version 1.64.4 with previous version 1.61.0 dated 2019-05-29

Title: May All Data be Reproducible and Transparent (MADRaT) *
Description: Provides a framework which should improve reproducibility and transparency in data processing. It provides functionality such as automatic meta data creation and management, rudimentary quality management, data caching, work-flow management and data aggregation. * The title is a wish not a promise. By no means we expect this package to deliver everything what is needed to achieve full reproducibility and transparency, but we believe that it supports efforts in this direction.
Author: Jan Philipp Dietrich [aut, cre], Lavinia Baumstark [aut], Stephen Wirth [aut], Anastasis Giannousakis [aut], Renato Rodrigues [aut], Benjamin Leon Bodirsky [aut], Ulrich Kreidenweis [aut]
Maintainer: Jan Philipp Dietrich <dietrich@pik-potsdam.de>

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Package eSDM updated to version 0.3.2 with previous version 0.3.1 dated 2019-10-17

Title: Ensemble Tool for Predictions from Species Distribution Models
Description: A tool which allows users to create and evaluate ensembles of species distribution model (SDM) predictions. Functionality is offered through R functions or a GUI (R Shiny app). This tool can assist users in identifying spatial uncertainties and making informed conservation and management decisions. The package is further described in Woodman et al (2019) <doi:10.1111/2041-210X.13283>.
Author: Sam Woodman [aut, cre] (<https://orcid.org/0000-0001-6071-8186>)
Maintainer: Sam Woodman <sam.woodman@noaa.gov>

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More information about eSDM at CRAN
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Package divo updated to version 1.0.1 with previous version 1.0.0 dated 2017-10-17

Title: Tools for Analysis of Diversity and Similarity in Biological Systems
Description: A set of tools for empirical analysis of diversity (a number and frequency of different types in population) and similarity (a number and frequency of shared types in two populations) in biological or ecological systems.
Author: Christoph Sadee, Maciej Pietrzak, Michal Seweryn, Cankun Wang, Grzegorz Rempala
Maintainer: Maciej Pietrzak <pietrzak.20@osu.edu>

Diff between divo versions 1.0.0 dated 2017-10-17 and 1.0.1 dated 2019-12-16

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More information about divo at CRAN
Permanent link

New package seqmagick with initial version 0.1.1
Package: seqmagick
Title: Sequence Manipulation Utilities
Version: 0.1.1
Authors@R: c( person("Guangchuang", "Yu", email = "guangchuangyu@gmail.com", role = c("aut", "cre"), comment = c(ORCID = "0000-0002-6485-8781")) )
Description: Supports reading and writing sequences for different formats (currently interleaved and sequential formats for 'FASTA' and 'PHYLIP'), file conversion, and manipulation (e.g. filter sequences that contain specify pattern, export consensus sequence from an alignment).
Depends: R (>= 3.4.0)
Imports: Biostrings, GenomicAlignments, GenomicRanges, IRanges, magrittr, muscle, Rsamtools, utils
Suggests: downloader, knitr, prettydoc
VignetteBuilder: knitr
ByteCompile: true
URL: https://github.com/YuLab-SMU/seqmagick
BugReports: https://github.com/YuLab-SMU/seqmagick/issues
License: Artistic-2.0
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.2
NeedsCompilation: no
Packaged: 2019-12-12 02:16:58 UTC; ygc
Author: Guangchuang Yu [aut, cre] (<https://orcid.org/0000-0002-6485-8781>)
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Repository: CRAN
Date/Publication: 2019-12-16 22:40:03 UTC

More information about seqmagick at CRAN
Permanent link

Package markovchain updated to version 0.8.1 with previous version 0.8.0 dated 2019-09-14

Title: Easy Handling Discrete Time Markov Chains
Description: Functions and S4 methods to create and manage discrete time Markov chains more easily. In addition functions to perform statistical (fitting and drawing random variates) and probabilistic (analysis of their structural proprieties) analysis are provided.
Author: Giorgio Alfredo Spedicato [aut, cre] (<https://orcid.org/0000-0002-0315-8888>), Tae Seung Kang [aut], Sai Bhargav Yalamanchi [aut], Mildenberger Thoralf [ctb] (<https://orcid.org/0000-0001-7242-1873>), Deepak Yadav [aut], Ignacio Cordón [aut] (<https://orcid.org/0000-0002-3152-0231>), Vandit Jain [ctb], Toni Giorgino [ctb] (<https://orcid.org/0000-0001-6449-0596>)
Maintainer: Giorgio Alfredo Spedicato <spedicato_giorgio@yahoo.it>

Diff between markovchain versions 0.8.0 dated 2019-09-14 and 0.8.1 dated 2019-12-16

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More information about markovchain at CRAN
Permanent link

Package gustave updated to version 0.4.1 with previous version 0.4.0 dated 2018-08-31

Title: A User-Oriented Statistical Toolkit for Analytical Variance Estimation
Description: Provides a toolkit for analytical variance estimation in survey sampling. Apart from the implementation of standard variance estimators, its main feature is to help the sampling expert produce easy-to-use variance estimation "wrappers", where systematic operations (linearization, domain estimation) are handled in a consistent and transparent way.
Author: Martin Chevalier [aut, cre, cph]
Maintainer: Martin Chevalier <martin.chevalier@insee.fr>

Diff between gustave versions 0.4.0 dated 2018-08-31 and 0.4.1 dated 2019-12-16

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More information about gustave at CRAN
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Package EMMIXmfa updated to version 2.0.11 with previous version 2.0.7 dated 2018-10-19

Title: Mixture Models with Component-Wise Factor Analyzers
Description: We provide functions to fit finite mixtures of multivariate normal or t-distributions to data with various factor analytic structures adopted for the covariance/scale matrices. The factor analytic structures available include mixtures of factor analyzers and mixtures of common factor analyzers. The latter approach is so termed because the matrix of factor loadings is common to components before the component-specific rotation of the component factors to make them white noise. Note that the component-factor loadings are not common after this rotation. Maximum likelihood estimators of model parameters are obtained via the Expectation-Maximization algorithm. See descriptions of the algorithms used in McLachlan GJ, Peel D (2000) <doi:10.1002/0471721182.ch8> McLachlan GJ, Peel D (2000) <ISBN:1-55860-707-2> McLachlan GJ, Peel D, Bean RW (2003) <doi:10.1016/S0167-9473(02)00183-4> McLachlan GJ, Bean RW, Ben-Tovim Jones L (2007) <doi:10.1016/j.csda.2006.09.015> Baek J, McLachlan GJ, Flack LK (2010) <doi:10.1109/TPAMI.2009.149> Baek J, McLachlan GJ (2011) <doi:10.1093/bioinformatics/btr112> McLachlan GJ, Baek J, Rathnayake SI (2011) <doi:10.1002/9781119995678.ch9>.
Author: Suren Rathnayake, Geoff McLachlan, David Peel, Jangsun Baek
Maintainer: Suren Rathnayake <surenr@gmail.com>

Diff between EMMIXmfa versions 2.0.7 dated 2018-10-19 and 2.0.11 dated 2019-12-16

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Permanent link

Package DBItest updated to version 1.7.0 with previous version 1.5-2 dated 2018-01-25

Title: Testing 'DBI' 'Backends'
Description: A helper that tests 'DBI' back ends for conformity to the interface.
Author: Kirill Müller [aut, cre] (<https://orcid.org/0000-0002-1416-3412>), RStudio [cph], R Consortium [fnd]
Maintainer: Kirill Müller <krlmlr+r@mailbox.org>

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Package Rcapture updated to version 1.4-3 with previous version 1.4-2 dated 2014-08-28

Title: Loglinear Models for Capture-Recapture Experiments
Description: Estimation of abundance and other demographic parameters for closed populations, open populations and the robust design in capture-recapture experiments using loglinear models.
Author: Louis-Paul Rivest [aut, cre], Sophie Baillargeon [aut]
Maintainer: Louis-Paul Rivest <Louis-Paul.Rivest@mat.ulaval.ca>

Diff between Rcapture versions 1.4-2 dated 2014-08-28 and 1.4-3 dated 2019-12-16

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New package oddstream with initial version 0.5.0
Package: oddstream
Type: Package
Title: Outlier Detection in Data Streams
Version: 0.5.0
Depends: R (>= 3.4.0)
Maintainer: Priyanga Dilini Talagala <pritalagala@gmail.com>
Authors@R: c( person("Priyanga Dilini", "Talagala", email="pritalagala@gmail.com", role= c("aut","cre")), person("Rob J.", "Hyndman", role=c("ths")), person("Kate", "Smith-Miles", role=c("ths")) )
Description: We proposes a framework that provides real time support for early detection of anomalous series within a large collection of streaming time series data. By definition, anomalies are rare in comparison to a system's typical behaviour. We define an anomaly as an observation that is very unlikely given the forecast distribution. The algorithm first forecasts a boundary for the system's typical behaviour using a representative sample of the typical behaviour of the system. An approach based on extreme value theory is used for this boundary prediction process. Then a sliding window is used to test for anomalous series within the newly arrived collection of series. Feature based representation of time series is used as the input to the model. To cope with concept drift, the forecast boundary for the system's typical behaviour is updated periodically. More details regarding the algorithm can be found in Talagala, P. D., Hyndman, R. J., Smith-Miles, K., et al. (2019) <doi:10.1080/10618600.2019.1617160>.
BugReports: https://github.com/pridiltal/oddstream/issues
License: GPL-3
LazyData: true
RoxygenNote: 6.1.1
Imports: pcaPP, stats, ggplot2, ks, MASS, RcppRoll, mgcv, moments , RColorBrewer, mvtsplot, tibble, reshape, dplyr, graphics, tidyr, kernlab, magrittr
Encoding: UTF-8
Suggests: testthat, tidyverse
NeedsCompilation: no
Packaged: 2019-12-12 01:12:53 UTC; priyangatalagala
Author: Priyanga Dilini Talagala [aut, cre], Rob J. Hyndman [ths], Kate Smith-Miles [ths]
Repository: CRAN
Date/Publication: 2019-12-16 22:00:03 UTC

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Package meta updated to version 4.9-8 with previous version 4.9-7 dated 2019-09-28

Title: General Package for Meta-Analysis
Description: User-friendly general package providing standard methods for meta-analysis and supporting Schwarzer, Carpenter, and Rücker <DOI:10.1007/978-3-319-21416-0>, "Meta-Analysis with R" (2015): - fixed effect and random effects meta-analysis; - several plots (forest, funnel, Galbraith / radial, L'Abbe, Baujat, bubble); - statistical tests and trim-and-fill method to evaluate bias in meta-analysis; - import data from 'RevMan 5'; - prediction interval, Hartung-Knapp and Paule-Mandel method for random effects model; - cumulative meta-analysis and leave-one-out meta-analysis; - meta-regression; - generalised linear mixed models; - produce forest plot summarising several (subgroup) meta-analyses.
Author: Guido Schwarzer [cre, aut] (<https://orcid.org/0000-0001-6214-9087>)
Maintainer: Guido Schwarzer <sc@imbi.uni-freiburg.de>

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New package DCCA with initial version 0.1.0
Package: DCCA
Version: 0.1.0
Date: 2019-11-11
Title: Detrended Fluctuation and Detrended Cross-Correlation Analysis
Authors@R: c(person("Taiane Schaedler","Prass", email = "taianeprass@gmail.com", role = c("aut","cre"), comment = c(ORCID="0000-0003-3136-909X")), person("Guilherme","Pumi", email = "guilherme.pumi@ufrgs.br", role = c("aut"), comment = c(ORCID="0000-0002-6256-3170")))
Depends: R (>= 3.5.0)
Imports: checkmate
Suggests: lattice
Description: A collection of functions to perform Detrended Fluctuation Analysis (DFA) and Detrended Cross-Correlation Analysis (DCCA). This package implements the results presented in Prass, T.S. and Pumi, G. (2019). "On the behavior of the DFA and DCCA in trend-stationary processes" <arXiv:1910.10589>.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
NeedsCompilation: yes
Packaged: 2019-12-11 17:08:22 UTC; taian
Author: Taiane Schaedler Prass [aut, cre] (<https://orcid.org/0000-0003-3136-909X>), Guilherme Pumi [aut] (<https://orcid.org/0000-0002-6256-3170>)
Maintainer: Taiane Schaedler Prass <taianeprass@gmail.com>
Repository: CRAN
Date/Publication: 2019-12-16 21:20:02 UTC

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Package saws updated to version 0.9-6.2 with previous version 0.9-6.1 dated 2014-01-22

Title: Small-Sample Adjustments for Wald Tests Using Sandwich Estimators
Description: Tests coefficients with sandwich estimator of variance and with small samples. Regression types supported are gee, linear regression, and conditional logistic regression.
Author: Michael P. Fay
Maintainer: Michael P. Fay <mfay@niaid.nih.gov>

Diff between saws versions 0.9-6.1 dated 2014-01-22 and 0.9-6.2 dated 2019-12-16

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Package mfe updated to version 0.1.4 with previous version 0.1.3 dated 2019-08-26

Title: Meta-Feature Extractor
Description: Extracts meta-features from datasets to support the design of recommendation systems based on Meta-Learning. The meta-features, also called characterization measures, are able to characterize the complexity of datasets and to provide estimates of algorithm performance. The package contains not only the standard characterization measures, but also more recent characterization measures. By making available a large set of meta-feature extraction functions, tasks like comprehensive data characterization, deep data exploration and large number of Meta-Learning based data analysis can be performed. These concepts are described in the paper: Adriano Rivolli, Luis Garcia, Carlos Soares, Joaquin Vanschoren, and Andre de Carvalho. Towards Reproducible Empirical Research in Meta-Learning.
Author: Adriano Rivolli [aut, cre], Luis P. F. Garcia [aut], Andre C. P. L. F. de Carvalho [ths]
Maintainer: Adriano Rivolli <rivolli@utfpr.edu.br>

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Package hereR updated to version 0.2.1 with previous version 0.2.0 dated 2019-11-13

Title: 'sf'-Based Interface to the 'HERE' REST APIs
Description: Interface to the 'HERE' REST APIs <https://developer.here.com/develop/rest-apis>: (1) geocode and autocomplete addresses or reverse geocode POIs using the 'Geocoder' API; (2) routing directions, travel distance or time matrices and isolines using the 'Routing' API; (3) real-time traffic flow and incident information from the 'Traffic' API; (4) weather forecasts, reports on current weather conditions, astronomical information and alerts at a specific location from the 'Destination Weather' API. Locations, routes and isolines are returned as 'sf' objects.
Author: Merlin Unterfinger [aut, cre]
Maintainer: Merlin Unterfinger <info@munterfinger.ch>

Diff between hereR versions 0.2.0 dated 2019-11-13 and 0.2.1 dated 2019-12-16

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Package HCmodelSets updated to version 1.1 with previous version 1.0.2 dated 2018-12-17

Title: Regression with a Large Number of Potential Explanatory Variables
Description: Software for performing the reduction, exploratory and model selection phases of the procedure proposed by Cox, D.R. and Battey, H.S. (2017) <doi:10.1073/pnas.1703764114> for sparse regression when the number of potential explanatory variables far exceeds the sample size. The software supports linear regression, likelihood-based fitting of generalized linear regression models and the proportional hazards model fitted by partial likelihood.
Author: H. H. Hoeltgebaum
Maintainer: H. H. Hoeltgebaum <hh3015@ic.ac.uk>

Diff between HCmodelSets versions 1.0.2 dated 2018-12-17 and 1.1 dated 2019-12-16

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Package dvmisc updated to version 1.1.4 with previous version 1.1.3 dated 2019-03-05

Title: Convenience Functions, Moving Window Statistics, and Graphics
Description: Contains functions that do something convenient (e.g. create BMI categories), functions for calculating moving-window statistics efficiently, and functions for generating various figures (e.g. histograms with fitted probability mass/density function).
Author: Dane R. Van Domelen
Maintainer: Dane R. Van Domelen <vandomed@gmail.com>

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New package chronosphere with initial version 0.2.0
Package: chronosphere
Type: Package
Title: Earth System History Variables
Version: 0.2.0
Author: Adam T. Kocsis, Nussaibah B. Raja
Maintainer: Adam T. Kocsis <adam.t.kocsis@gmail.com>
Description: The purpose of the 'chronosphere' project is to facilitate spatially explicit analyses of (paleo)environmental/ecological research. The package serves as a gateway to plate tectonic reconstructions, deep time global climate model results as well as fossil occurrence datasets such as the Paleobiology Database <https://www.paleobiodb.org/> and the PaleoReefs Database <https://www.paleo-reefs.pal.uni-erlangen.de/>. Environmental data stored on a remote server can be downloaded and imported directly to the R environment. Query functions to the GPlates <https://www.gplates.org/> desktop application or the GPlates Web Service <https://gws.gplates.org/> allow users to reconstruct coordinates, static plates, and Spatial objects. A wrapper class 'RasterArray' is implemented around the 'RasterLayer' class, allowing the organization of spatially explicit raster data in n-dimensional arrays. The project is developed under the umbrella of the DFG (Deutsche Forschungsgemeinschaft) Research Unit TERSANE2 (For 2332, TEmperature Related Stressors in ANcient Extinctions).
License: CC BY 4.0
Date: 2019-12-11
BugReports: https://github.com/adamkocsis/chronosphere/issues
Encoding: UTF-8
LazyData: false
Depends: R (>= 3.5.0), raster, sp
Imports: graphics, methods, grDevices, utils
NeedsCompilation: no
RoxygenNote: 6.1.1
VignetteBuilder: knitr
Suggests: jpeg, knitr, ncdf4, rgdal, rmarkdown
Packaged: 2019-12-11 11:14:13 UTC; root
Repository: CRAN
Date/Publication: 2019-12-16 20:20:02 UTC

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Package BEDMatrix updated to version 2.0.1 with previous version 1.6.1 dated 2019-06-21

Title: Extract Genotypes from a PLINK .bed File
Description: A matrix-like data structure that allows for efficient, convenient, and scalable subsetting of binary genotype/phenotype files generated by PLINK (<https://www.cog-genomics.org/plink2>), the whole genome association analysis toolset, without loading the entire file into memory.
Author: Alexander Grueneberg [aut, cre], Gustavo de los Campos [ctb]
Maintainer: Alexander Grueneberg <alexander.grueneberg@googlemail.com>

Diff between BEDMatrix versions 1.6.1 dated 2019-06-21 and 2.0.1 dated 2019-12-16

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Package EMbC updated to version 2.0.3 with previous version 2.0.2 dated 2019-09-04

Title: Expectation-Maximization Binary Clustering
Description: Unsupervised, multivariate, binary clustering for meaningful annotation of data, taking into account the uncertainty in the data. A specific constructor for trajectory analysis in movement ecology yields behavioural annotation of trajectories based on estimated local measures of velocity and turning angle, eventually with solar position covariate as a daytime indicator, ("Expectation-Maximization Binary Clustering for Behavioural Annotation").
Author: Joan Garriga, John R.B. Palmer, Aitana Oltra, Frederic Bartumeus
Maintainer: Joan Garriga <jgarriga@ceab.csic.es>

Diff between EMbC versions 2.0.2 dated 2019-09-04 and 2.0.3 dated 2019-12-16

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Package psychNET updated to version 0.0.2 with previous version 0.0.1 dated 2019-07-03

Title: Psychometric Networks for Intensive Longitudinal Data
Description: In the past decade, mental processes have been conceptualized as complex networks of interacting psychiatric symptoms. These networks that can be visualized by means of conditional independence graphs. For estimating the underlying directed graph from intensive longitudinal data, vector autoregression (VAR) is the most commonly used tool. This package wraps several methods in the VAR family that can be used to estimate conditional independence graphs (networks) from multivariate time-series data. The package can fit the simple VAR and VARX model Lutkepohl, H. (2005) <doi:10.1007/978-3-540-27752-1> that are currently available from the R package 'vars', and its sparse alternative by Basu S. and Michailidis, G.(2015) <doi:10.1214/15-AOS1315> and sparse VECM implemented in the R package 'sparsevar'. The sparse graphical VAR with covariance estimation by Wild, B., Eichler, M., Friederich, H. C., Hartmann, M., Zipfel, S., & Herzog, W. (2010) <doi:10.1186/1471-2288-10-28> from the R package 'graphicalVAR' and the dynamic factor model by Doz, Gianone & Reichlin (2011) <doi:10.1016/j.jeconom.2011.02.012> from the R package 'dynfactoR' are also available. Sparse estimation of high dimensional VAR, VARMA and VARX models using hierarchical lag structures Nicholson, W. B., Bien, J., Matteson, D. S. (2017) <arXiv:1412.5250v3> implemented in the R package 'bigtime' and mixed VAR for symptom time series with marginal distributions in the exponential family Haslbeck, J., Waldorp, L. J. (2015) <arXiv:1510.06871> from the package 'mgm' can also be used with this package. For the inference of symptom networks from multivariate time series of multiple individuals the 'psychNET' package adopts the multi-level VAR by Epskamp, S., Waldorp, L. J., Mottus, R., & Borsboom, D. (2017) <arXiv:1609.04156v6> implemented in the R package 'mlVAR' and for the high-dimensional setting the sparse time series chain graphical (group graphical VAR) model by Abegaz, F., Wit, E. (2013) <doi:10.1093/biostatistics/kxt005> available from the R package 'sparseTSCGM'.
Author: Spyros Balafas [aut, cre], Ernst Wit [aut], Marco Grzegorczyk [aut], Sanne Booij [ctb], Hanneke Wardenaar-Wigman [ctb]
Maintainer: Spyros Balafas <s.balafas@rug.nl>

Diff between psychNET versions 0.0.1 dated 2019-07-03 and 0.0.2 dated 2019-12-16

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Package windfarmGA updated to version 2.2.3 with previous version 2.2.2 dated 2019-08-27

Title: Genetic Algorithm for Wind Farm Layout Optimization
Description: The genetic algorithm is designed to optimize wind farms of any shape. It requires a predefined amount of turbines, a unified rotor radius and an average wind speed value for each incoming wind direction. A terrain effect model can be included that downloads an 'SRTM' elevation model and loads a Corine Land Cover raster to approximate surface roughness.
Author: Sebastian Gatscha [aut, cre]
Maintainer: Sebastian Gatscha <sebastian_gatscha@gmx.at>

Diff between windfarmGA versions 2.2.2 dated 2019-08-27 and 2.2.3 dated 2019-12-16

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Package unmarked updated to version 0.13-1 with previous version 0.13-0 dated 2019-11-12

Title: Models for Data from Unmarked Animals
Description: Fits hierarchical models of animal abundance and occurrence to data collected using survey methods such as point counts, site occupancy sampling, distance sampling, removal sampling, and double observer sampling. Parameters governing the state and observation processes can be modeled as functions of covariates.
Author: Ian Fiske, Richard Chandler, David Miller, Andy Royle, Marc Kery, Jeff Hostetler, Rebecca Hutchinson, Adam Smith, Ken Kellner
Maintainer: Andy Royle <aroyle@usgs.gov>

Diff between unmarked versions 0.13-0 dated 2019-11-12 and 0.13-1 dated 2019-12-16

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Package ramps updated to version 0.6.16 with previous version 0.6-15 dated 2018-03-26

Title: Bayesian Geostatistical Modeling with RAMPS
Description: Bayesian geostatistical modeling of Gaussian processes using a reparameterized and marginalized posterior sampling (RAMPS) algorithm designed to lower autocorrelation in MCMC samples. Package performance is tuned for large spatial datasets.
Author: Brian J Smith [aut, cre], Jun Yan [aut], Mary Kathryn Cowles [aut]
Maintainer: Brian J Smith <brian-j-smith@uiowa.edu>

Diff between ramps versions 0.6-15 dated 2018-03-26 and 0.6.16 dated 2019-12-16

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Package icenReg updated to version 2.0.13 with previous version 2.0.11 dated 2019-11-10

Title: Regression Models for Interval Censored Data
Description: Regression models for interval censored data. Currently supports Cox-PH, proportional odds, and accelerated failure time models. Allows for semi and fully parametric models (parametric only for accelerated failure time models) and Bayesian parametric models. Includes functions for easy visual diagnostics of model fits and imputation of censored data.
Author: Clifford Anderson-Bergman
Maintainer: Clifford Anderson-Bergman <pistacliffcho@gmail.com>

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Package EMA updated to version 1.4.6 with previous version 1.4.5 dated 2016-09-07

Title: Easy Microarray Data Analysis
Description: We propose both a clear analysis strategy and a selection of tools to investigate microarray gene expression data. The most usual and relevant existing R functions were discussed, validated and gathered in an easy-to-use R package (EMA) devoted to gene expression microarray analysis. These functions were improved for ease of use, enhanced visualisation and better interpretation of results.
Author: Nicolas Servant, Eleonore Gravier, Pierre Gestraud, Cecile Laurent, Caroline Paccard, Anne Biton, Jonas Mandel, Bernard Asselain, Emmanuel Barillot, Philippe Hupe
Maintainer: Pierre Gestraud <pierre.gestraud@curie.fr>

Diff between EMA versions 1.4.5 dated 2016-09-07 and 1.4.6 dated 2019-12-16

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Package solvebio updated to version 2.7.1 with previous version 2.7.0 dated 2019-11-07

Title: The Official SolveBio API Client
Description: R language bindings for SolveBio's API. SolveBio is a biomedical knowledge hub that enables life science organizations to collect and harmonize the complex, disparate "multi-omic" data essential for today's R&D and BI needs. For more information, visit <https://www.solvebio.com>.
Author: David Caplan
Maintainer: David Caplan <dcaplan@solvebio.com>

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Package archiDART updated to version 3.3 with previous version 3.2 dated 2018-04-03

Title: Plant Root System Architecture Analysis Using DART and RSML Files
Description: Analysis of complex plant root system architectures (RSA) using the output files created by Data Analysis of Root Tracings (DART), an open-access software dedicated to the study of plant root architecture and development across time series (Le Bot et al (2010) "DART: a software to analyse root system architecture and development from captured images", Plant and Soil, <DOI:10.1007/s11104-009-0005-2>), and RSA data encoded with the Root System Markup Language (RSML) (Lobet et al (2015) "Root System Markup Language: toward a unified root architecture description language", Plant Physiology, <DOI:10.1104/pp.114.253625>). More information can be found in Delory et al (2016) "archiDART: an R package for the automated computation of plant root architectural traits", Plant and Soil, <DOI:10.1007/s11104-015-2673-4>.
Author: Benjamin M Delory, Caroline Baudson, Yves Brostaux, Guillaume Lobet, Patrick du Jardin, Loic Pages, Pierre Delaplace
Maintainer: Benjamin M Delory <Benjamin.Delory@leuphana.de>

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Package validate updated to version 0.9.3 with previous version 0.9.2 dated 2019-08-28

Title: Data Validation Infrastructure
Description: Declare data validation rules and data quality indicators; confront data with them and analyze or visualize the results. The package supports rules that are per-field, in-record, cross-record or cross-dataset. Rules can be automatically analyzed for rule type and connectivity. See also Van der Loo and De Jonge (2018) <doi:10.1002/9781118897126>, chapter 6.
Author: Mark van der Loo [cre, aut] (<https://orcid.org/0000-0002-9807-4686>), Edwin de Jonge [aut] (<https://orcid.org/0000-0002-6580-4718>), Paul Hsieh [ctb]
Maintainer: Mark van der Loo <mark.vanderloo@gmail.com>

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Package Rfast2 updated to version 0.0.5 with previous version 0.0.4 dated 2019-08-05

Title: A Collection of Efficient and Extremely Fast R Functions II
Description: A collection of fast statistical and utility functions for data analysis. Functions for regression, maximum likelihood, column-wise statistics and many more have been included. C++ has been utilized to speed up the functions.
Author: Manos Papadakis, Michail Tsagris, Stefanos Fafalios and Marios Dimitriadis.
Maintainer: Manos Papadakis <rfastofficial@gmail.com>

Diff between Rfast2 versions 0.0.4 dated 2019-08-05 and 0.0.5 dated 2019-12-16

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Permanent link

New package nse2r with initial version 0.1.0
Package: nse2r
Type: Package
Title: Fetch Data from 'National Stock Exchange (India)'
Version: 0.1.0
Authors@R: c(person("Lokesh", "Kumar", role = c("aut"), email = "latreja@gmail.com"), person("Aravind", "Hebbali", role = c("aut", "cre"), email = "hebbali.aravind@gmail.com"), person("Lionel", "Pinto", role = c("ctb"), email = "lionel.nie@gmail.com"))
Description: Fetch data related to stocks, index, futures & options from the 'NSE (National Stock Exchange, India)'. This package is community maintained and is not officially supported by 'NSE'. The accuracy of data is only as correct as provided on <https://www.nseindia.com>.
License: MIT + file LICENSE
URL: https://github.com/rsquaredacademy/nse2r, https://nse2r.rsquaredacademy.com/
BugReports: https://github.com/rsquaredacademy/nse2r/issues
Depends: R(>= 3.3)
Imports: httr, jsonlite, magrittr, purrr, rvest, shiny, stringr, tibble, utils, xml2
Suggests: dplyr, DT, shinyBS, shinycssloaders, shinythemes
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
NeedsCompilation: no
Packaged: 2019-12-11 08:02:14 UTC; HP
Author: Lokesh Kumar [aut], Aravind Hebbali [aut, cre], Lionel Pinto [ctb]
Maintainer: Aravind Hebbali <hebbali.aravind@gmail.com>
Repository: CRAN
Date/Publication: 2019-12-16 15:10:02 UTC

More information about nse2r at CRAN
Permanent link

Package msm updated to version 1.6.8 with previous version 1.6.7 dated 2019-03-18

Title: Multi-State Markov and Hidden Markov Models in Continuous Time
Description: Functions for fitting continuous-time Markov and hidden Markov multi-state models to longitudinal data. Designed for processes observed at arbitrary times in continuous time (panel data) but some other observation schemes are supported. Both Markov transition rates and the hidden Markov output process can be modelled in terms of covariates, which may be constant or piecewise-constant in time.
Author: Christopher Jackson <chris.jackson@mrc-bsu.cam.ac.uk>
Maintainer: Christopher Jackson <chris.jackson@mrc-bsu.cam.ac.uk>

Diff between msm versions 1.6.7 dated 2019-03-18 and 1.6.8 dated 2019-12-16

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Package fda.usc updated to version 2.0.1 with previous version 2.0.0 dated 2019-11-14

Title: Functional Data Analysis and Utilities for Statistical Computing
Description: Routines for exploratory and descriptive analysis of functional data such as depth measurements, atypical curves detection, regression models, supervised classification, unsupervised classification and functional analysis of variance.
Author: Manuel Febrero Bande [aut], Manuel Oviedo de la Fuente [aut, cre], Pedro Galeano [ctb], Alicia Nieto [ctb], Eduardo Garcia-Portugues [ctb]
Maintainer: Manuel Oviedo de la Fuente <manuel.oviedo@usc.es>

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Package EMMAgeo updated to version 0.9.7 with previous version 0.9.6 dated 2019-05-17

Title: End-Member Modelling of Grain-Size Data
Description: End-member modelling analysis of grain-size data is an approach to unmix a data set's underlying distributions and their contribution to the data set. EMMAgeo provides deterministic and robust protocols for that purpose.
Author: Michael Dietze, Elisabeth Dietze
Maintainer: Michael Dietze <mdietze@gfz-potsdam.de>

Diff between EMMAgeo versions 0.9.6 dated 2019-05-17 and 0.9.7 dated 2019-12-16

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Permanent link

Package surveillance updated to version 1.17.3 with previous version 1.17.2 dated 2019-11-12

Title: Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena
Description: Statistical methods for the modeling and monitoring of time series of counts, proportions and categorical data, as well as for the modeling of continuous-time point processes of epidemic phenomena. The monitoring methods focus on aberration detection in count data time series from public health surveillance of communicable diseases, but applications could just as well originate from environmetrics, reliability engineering, econometrics, or social sciences. The package implements many typical outbreak detection procedures such as the (improved) Farrington algorithm, or the negative binomial GLR-CUSUM method of H<f6>hle and Paul (2008) <doi:10.1016/j.csda.2008.02.015>. A novel CUSUM approach combining logistic and multinomial logistic modeling is also included. The package contains several real-world data sets, the ability to simulate outbreak data, and to visualize the results of the monitoring in a temporal, spatial or spatio-temporal fashion. A recent overview of the available monitoring procedures is given by Salmon et al. (2016) <doi:10.18637/jss.v070.i10>. For the retrospective analysis of epidemic spread, the package provides three endemic-epidemic modeling frameworks with tools for visualization, likelihood inference, and simulation. hhh4() estimates models for (multivariate) count time series following Paul and Held (2011) <doi:10.1002/sim.4177> and Meyer and Held (2014) <doi:10.1214/14-AOAS743>. twinSIR() models the susceptible-infectious-recovered (SIR) event history of a fixed population, e.g, epidemics across farms or networks, as a multivariate point process as proposed by H<f6>hle (2009) <doi:10.1002/bimj.200900050>. twinstim() estimates self-exciting point process models for a spatio-temporal point pattern of infective events, e.g., time-stamped geo-referenced surveillance data, as proposed by Meyer et al. (2012) <doi:10.1111/j.1541-0420.2011.01684.x>. A recent overview of the implemented space-time modeling frameworks for epidemic phenomena is given by Meyer et al. (2017) <doi:10.18637/jss.v077.i11>.
Author: Michael H<f6>hle [aut, ths] (<https://orcid.org/0000-0002-0423-6702>), Sebastian Meyer [aut, cre] (<https://orcid.org/0000-0002-1791-9449>), Michaela Paul [aut], Leonhard Held [ctb, ths], Howard Burkom [ctb], Thais Correa [ctb], Mathias Hofmann [ctb], Christian Lang [ctb], Juliane Manitz [ctb], Andrea Riebler [ctb], Daniel Saban<e9>s Bov<e9> [ctb], Ma<eb>lle Salmon [ctb], Dirk Schumacher [ctb], Stefan Steiner [ctb], Mikko Virtanen [ctb], Wei Wei [ctb], Valentin Wimmer [ctb], R Core Team [ctb] (A few code segments are modified versions of code from base R)
Maintainer: Sebastian Meyer <seb.meyer@fau.de>

Diff between surveillance versions 1.17.2 dated 2019-11-12 and 1.17.3 dated 2019-12-16

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New package statarepl with initial version 0.1.0
Package: statarepl
Type: Package
Title: Launch and Interact with a 'Stata' Session
Version: 0.1.0
Authors@R: c( person(given = "Zhenxing", family = "Cheng", role = c("aut", "cre"), email = "czxjnu@163.com"), person(given = "Shuiqin", family = "Zhang", role = c("aut", "ctb"), email = "2633461990@qq.com"))
Description: Launch and interact with a 'Stata' session. Provides a interface for the user to evaluate 'Stata' codes from R or start a 'Stata' session to evaluate 'Stata' codes interactively.
License: MIT + file LICENSE
Date: 2019-12-16
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.0.0)
Imports: R6, cli, crayon, subprocess, rlang, jsonlite, knitr, utils, attempt, tools, rstudioapi
SystemRequirements: Stata
Suggests: rmarkdown
URL: https://github.com/czxa/statarepl
BugReports: https://github.com/czxa/statarepl/issues
RoxygenNote: 7.0.2
NeedsCompilation: no
Packaged: 2019-12-16 12:49:19 UTC; czx
Author: Zhenxing Cheng [aut, cre], Shuiqin Zhang [aut, ctb]
Maintainer: Zhenxing Cheng <czxjnu@163.com>
Repository: CRAN
Date/Publication: 2019-12-16 14:20:02 UTC

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New package MGMS2 with initial version 1.0.0
Package: MGMS2
Title: 'MGMS2' for Polymicrobial Samples
Version: 1.0.0
Authors@R: c( person(given = "So Young", family = "Ryu", role = "aut", email = "soyoungr@unr.edu", comment = c(ORCID = "0000-0003-2347-7015")), person(given = "George", family = "Wendt", role = "cre", email = "gwendt@unr.edu", comment = c(ORCID = "0000-0003-3608-9601")))
Author: So Young Ryu [aut] (<https://orcid.org/0000-0003-2347-7015>), George Wendt [cre] (<https://orcid.org/0000-0003-3608-9601>)
Maintainer: George Wendt <gwendt@unr.edu>
Description: A glycolipid mass spectrometry technology has the potential to accurately identify individual bacterial species from polymicrobial samples. To develop bacterial identification algorithms (e.g. machine learning) using this glycolipid technology, it is necessary to generate a large number of various in-silico polymicrobial mass spectra that are similar to real mass spectra. 'MGMS2' (Membrane Glycolipid Mass Spectrum Simulator) generates such in-silico mass spectra, considering errors in m/z (mass-to-charge ratio) and variances of intensity values, occasions of missing signature ions, and noise peaks. It estimates summary statistics of monomicrobial mass spectra for each strain or species and simulates polymicrobial glycolipid mass spectra using the summary statistics of monomicrobial mass spectra. Ryu, S.Y., Wendt, G.A., Chandler, C.E., Ernst, R.K. and Goodlett, D.R. (2019) <doi:10.1021/acs.analchem.9b03340> "Model-based Spectral Library Approach for Bacterial Identification via Membrane Glycolipids." Gibb, S. and Strimmer, K. (2012) <doi:10.1093/bioinformatics/bts447> "MALDIquant: a versatile R package for the analysis of mass spectrometry data."
License: GPL-3
Encoding: UTF-8
LazyData: true
Depends: MALDIquant, MALDIquantForeign
RoxygenNote: 7.0.2
Suggests: testthat
NeedsCompilation: no
Packaged: 2019-12-10 15:37:18 UTC; jakewendt
Repository: CRAN
Date/Publication: 2019-12-16 14:20:05 UTC

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New package LARisk with initial version 0.1.0
Package: LARisk
Type: Package
Title: Estimation of Lifetime Attributable Risk of Cancer from Radiation Exposure
Version: 0.1.0
Date: 2019-12-16
Authors@R: c(person('YeongWoo', 'Park', role = 'aut', email = 'yeong1991@naver.com'), person('Juhee', 'Lee', role = c('aut', 'cre'), email = 'ljh988488@gmail.com'), person('Young-Min', 'Kim', role = 'aut', email = 'kymmyself@knu.ac.kr'), person('Songwon', 'Seo', role = 'ctb', email = 'songwon@gmail.com'), person('Eun-Shil', 'Cha', role = 'ctb', email = 'eunshiri83@korea.ac.kr'), person('Tae-Sung', 'Shin', role = 'aut', email = 'sts7451@gmail.com'), person('DeokKi', 'An', role = 'aut', email = 'dkan1209@naver.com'), person('Jinkyung', 'Yoo', role = 'aut', email = 'w.yoojinky@gmail.com'), person('Yu-Jeong', 'An', role = 'aut', email = 'ayj9307@gmail.com'), person('Won-Jin', 'Lee', role = 'ctb', email = 'leewj@korea.ac.kr'))
Maintainer: Juhee Lee <ljh988488@gmail.com>
Description: Compute lifetime attributable risk of radiation-induced cancer reveals that it can be helpful with enhancement of the flexibility in research with fast calculation and various options. Important reference papers include Berrington de Gonzalez et al. (2012) <doi:10.1088/0952-4746/32/3/205>, National Research Council (2006, ISBN:978-0-309-09156-5).
License: LGPL-3
Imports: Rcpp (>= 1.0.0)
Suggests: R.rsp
VignetteBuilder: R.rsp
Encoding: UTF-8
LinkingTo: Rcpp
RoxygenNote: 7.0.0
NeedsCompilation: yes
Packaged: 2019-12-16 13:40:50 UTC; ForceRecon
Author: YeongWoo Park [aut], Juhee Lee [aut, cre], Young-Min Kim [aut], Songwon Seo [ctb], Eun-Shil Cha [ctb], Tae-Sung Shin [aut], DeokKi An [aut], Jinkyung Yoo [aut], Yu-Jeong An [aut], Won-Jin Lee [ctb]
Repository: CRAN
Date/Publication: 2019-12-16 14:20:08 UTC

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New package hmgm with initial version 1.0.2
Package: hmgm
Type: Package
Title: High-Dimensional Mixed Graphical Models Estimation
Version: 1.0.2
Author: Mingyu Qi, Tianxi Li
Maintainer: Mingyu Qi <mq3sq@virginia.edu>
Description: Provides weighted group lasso framework for high-dimensional mixed data graph estimation. In the graph estimation stage, the graph structure is estimated by maximizing the conditional likelihood of one variable given the rest. We focus on the conditional loglikelihood of each variable and fit separate regressions to estimate the parameters, much in the spirit of the neighborhood selection approach proposed by Meinshausen-Buhlmann for the Gaussian Graphical Model and by Ravikumar for the Ising Model. Currently, the discrete variables can only take two values. In the future, method for general discrete data and for visualizing the estimated graph will be added. For more details, see the linked paper.
URL: <https://arxiv.org/pdf/1304.2810.pdf>
License: GPL (>= 2)
Depends: R(>= 3.5.0)
Imports: rgl, Matrix, glmnet, MASS, nat, binaryLogic, Rcpp, stats, methods
NeedsCompilation: yes
Encoding: UTF-8
RoxygenNote: 7.0.1
Packaged: 2019-12-10 16:45:59 UTC; mingyuqi
Repository: CRAN
Date/Publication: 2019-12-16 14:30:15 UTC

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New package chest with initial version 0.2.0
Package: chest
Type: Package
Title: Change-in-Estimate Approach to Assess Confounding Effects
Version: 0.2.0
Authors@R: person("Zhiqiang", "Wang", email = "zhiqiang.wang@menzies.edu.au", role = c("aut", "cre"))
Description: The 'chest' package applies the change-in-effect estimate method for assessing confounding effects in medical and epidemiological research. It starts with a crude model including only the outcome and exposure variables. At each of the subsequent steps, one variable which creates the largest change among the remaining variables is selected. This process is repeated until all variables have been entered into the model (Wang Z (2007) <doi:10.1177/1536867X0700700203>). Currently, the 'chest' package has functions for linear regression, logistic regression, Cox proportional hazards model and conditional logistic regression.
License: GPL-2
Encoding: UTF-8
LazyData: true
Imports: tidyverse, survival, grid, speedglm, forestplot, broom, tibble, MASS, scales, tidyselect
Depends: R (>= 2.10)
RoxygenNote: 7.0.2
Suggests: spelling, knitr, rmarkdown
VignetteBuilder: knitr
Language: en-US
NeedsCompilation: no
Packaged: 2019-12-11 02:11:08 UTC; uqzwang
Author: Zhiqiang Wang [aut, cre]
Maintainer: Zhiqiang Wang <zhiqiang.wang@menzies.edu.au>
Repository: CRAN
Date/Publication: 2019-12-16 15:00:02 UTC

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Package rminer updated to version 1.4.3 with previous version 1.4.2 dated 2016-09-02

Title: Data Mining Classification and Regression Methods
Description: Facilitates the use of data mining algorithms in classification and regression (including time series forecasting) tasks by presenting a short and coherent set of functions. Versions: 1.4.3 new metrics (e.g., macro precision, explained variance), new least squares support vector machine model and improved mparheuristic function; 1.4.2 new NMAE metric, "xgboost" and "cv.glmnet" models (16 classification and 18 regression models); 1.4.1 new tutorial and more robust version; 1.4 - new classification and regression models/algorithms, with a total of 14 classification and 15 regression methods, including: Decision Trees, Neural Networks, Support Vector Machines, Random Forests, Bagging and Boosting; 1.3 and 1.3.1 - new classification and regression metrics (improved mmetric function); 1.2 - new input importance methods (improved Importance function); 1.0 - first version.
Author: Paulo Cortez [aut, cre]
Maintainer: Paulo Cortez <pcortez@dsi.uminho.pt>

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Package rcarbon updated to version 1.3.0 with previous version 1.2.0 dated 2018-10-01

Title: Calibration and Analysis of Radiocarbon Dates
Description: Enables the calibration and analysis of radiocarbon dates, often but not exclusively for the purposes of archaeological research. It includes functions not only for basic calibration, uncalibration, and plotting of one or more dates, but also a statistical framework for building demographic and related longitudinal inferences from aggregate radiocarbon date lists, including: Monte-Carlo simulation test (Timpson et al 2014 <doi:10.1016/j.jas.2014.08.011>), random mark permutation test (Crema et al 2016 <doi:10.1371/journal.pone.0154809>) and spatial permutation tests (Crema, Bevan, and Shennan 2017 <doi:10.1016/j.jas.2017.09.007>).
Author: Andrew Bevan [aut], Enrico Crema [aut, cre], Fabio Silva [ctb]
Maintainer: Enrico Crema <enrico.crema@gmail.com>

Diff between rcarbon versions 1.2.0 dated 2018-10-01 and 1.3.0 dated 2019-12-16

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Package prettycode updated to version 1.1.0 with previous version 1.0.2 dated 2018-09-11

Title: Pretty Print R Code in the Terminal
Description: Replace the standard print method for functions with one that performs syntax highlighting, using ANSI colors, if the terminal supports them.
Author: Gábor Csárdi
Maintainer: Gábor Csárdi <csardi.gabor@gmail.com>

Diff between prettycode versions 1.0.2 dated 2018-09-11 and 1.1.0 dated 2019-12-16

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Package glmdisc updated to version 0.3 with previous version 0.2 dated 2019-09-16

Title: Discretization and Grouping for Logistic Regression
Description: A Stochastic-Expectation-Maximization (SEM) algorithm (Celeux et al. (1995) <https://hal.inria.fr/inria-00074164>) associated with a Gibbs sampler which purpose is to learn a constrained representation for logistic regression that is called quantization (Ehrhardt et al. (2019) <arXiv:1903.08920>). Continuous features are discretized and categorical features' values are grouped to produce a better logistic regression model. Pairwise interactions between quantized features are dynamically added to the model through a Metropolis-Hastings algorithm (Hastings, W. K. (1970) <doi:10.1093/biomet/57.1.97>).
Author: Adrien Ehrhardt [aut, cre], Vincent Vandewalle [aut], Christophe Biernacki [ctb], Philippe Heinrich [ctb]
Maintainer: Adrien Ehrhardt <adrien.ehrhardt@centraliens-lille.org>

Diff between glmdisc versions 0.2 dated 2019-09-16 and 0.3 dated 2019-12-16

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New package FiSh with initial version 1.0
Package: FiSh
Type: Package
Title: Fisher-Shannon Method
Version: 1.0
Authors@R: c( person("Fabian","Guignard", role=c("aut"), email="fabian.guignard@bluemail.ch"), person("Mohamed","Laib", role=c("aut","cre"), email="laib.med@gmail.com"))
Author: Fabian Guignard [aut], Mohamed Laib [aut, cre]
Maintainer: Mohamed Laib <laib.med@gmail.com>
Description: Proposes non-parametric estimates of the Fisher information measure and the Shannon entropy power. The state-of-the-art studies related to the Fisher-Shannon measures, with new analytical formulas for positive unimodal skewed distributions are presented in Guignard et al. <arXiv:1912.02452>. A 'python' version of this work is available on 'github' and 'PyPi' ('FiShPy').
Imports: fda.usc, KernSmooth
License: MIT + file LICENSE
URL: https://FiShInfo.github.io/
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
Note: The authors are grateful to Mikhail Kanevski, Federico Amato and Luciano Telesca for many fruitful discussions about the use and the application of Fisher-Shannon method.
NeedsCompilation: no
Packaged: 2019-12-10 10:47:05 UTC; laib
Repository: CRAN
Date/Publication: 2019-12-16 14:00:09 UTC

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Package estudy2 updated to version 0.9.1 with previous version 0.9.0 dated 2019-04-25

Title: An Implementation of Parametric and Nonparametric Event Study
Description: An implementation of a most commonly used event study methodology, including both parametric and nonparametric tests. It contains variety aspects of the rate of return estimation (the core calculation is done in C++), as well as three classical for event study market models: mean adjusted returns, market adjusted returns and single-index market models. There are 6 parametric and 6 nonparametric tests provided, which examine cross-sectional daily abnormal return (see the documentation of the functions for more information). Parametric tests include tests proposed by Brown and Warner (1980) <DOI:10.1016/0304-405X(80)90002-1>, Brown and Warner (1985) <DOI:10.1016/0304-405X(85)90042-X>, Boehmer et al. (1991) <DOI:10.1016/0304-405X(91)90032-F>, Patell (1976) <DOI:10.2307/2490543>, and Lamb (1995) <DOI:10.2307/253695>. Nonparametric tests covered in estudy2 are tests described in Corrado and Zivney (1992) <DOI:10.2307/2331331>, McConnell and Muscarella (1985) <DOI:10.1016/0304-405X(85)90006-6>, Boehmer et al. (1991) <DOI:10.1016/0304-405X(91)90032-F>, Cowan (1992) <DOI:10.1007/BF00939016>, Corrado (1989) <DOI:10.1016/0304-405X(89)90064-0>, Campbell and Wasley (1993) <DOI:10.1016/0304-405X(93)90025-7>, Savickas (2003) <DOI:10.1111/1475-6803.00052>, Kolari and Pynnonen (2010) <DOI:10.1093/rfs/hhq072>. Furthermore, tests for the cumulative abnormal returns proposed by Brown and Warner (1985) <DOI:10.1016/0304-405X(85)90042-X> and Lamb (1995) <DOI:10.2307/253695> are included.
Author: Iegor Rudnytskyi [aut, cre]
Maintainer: Iegor Rudnytskyi <iegor.rudnytskyi@gmail.com>

Diff between estudy2 versions 0.9.0 dated 2019-04-25 and 0.9.1 dated 2019-12-16

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New package SunsetTSA with initial version 1.0.0
Package: SunsetTSA
Type: Package
Title: Get Sunrise and Sunset Times for US Airport Locations
Version: 1.0.0
Authors@R: c(person("Sharon", "Machlis", email = "Rbook@machlis.com", role = c("aut", "cre")))
Description: Wrapper for a US Transportation Security Administration API. API info: <https://www.dhs.gov/mytsa-api-documentation> Includes helper functions to look up 3-letter codes for US airports.
License: GPL-3
Encoding: UTF-8
LazyData: true
Imports: httr
RoxygenNote: 7.0.2
Suggests: knitr, rmarkdown, testthat (>= 2.1.0)
VignetteBuilder: knitr
Depends: R (>= 2.10)
URL: https://smach.github.io/SunsetTSA/
BugReports: https://github.com/smach/SunsetTSA/issues
NeedsCompilation: no
Packaged: 2019-12-09 16:25:41 UTC; Sharon
Author: Sharon Machlis [aut, cre]
Maintainer: Sharon Machlis <Rbook@machlis.com>
Repository: CRAN
Date/Publication: 2019-12-16 12:10:02 UTC

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Package namer updated to version 0.1.5 with previous version 0.1.4 dated 2019-03-26

Title: Names Your 'R Markdown' Chunks
Description: It names the 'R Markdown' chunks of files based on the filename.
Author: Steph Locke [aut, cre], Maëlle Salmon [aut] (<https://orcid.org/0000-0002-2815-0399>), Ellis Valentiner [ctb], Martin Hadley [ctb] (<https://orcid.org/0000-0002-3039-6849>), Locke Data [fnd] (https://itsalocke.com), Han Oostdijk [ctb] (<https://orcid.org/0000-0001-6710-4566>)
Maintainer: Steph Locke <steph@itsalocke.com>

Diff between namer versions 0.1.4 dated 2019-03-26 and 0.1.5 dated 2019-12-16

 DESCRIPTION                             |   24 ++++++----
 MD5                                     |   22 +++++-----
 NEWS.md                                 |    6 ++
 R/unname_all_chunks.R                   |   32 ++++++++++++--
 build/vignette.rds                      |binary
 inst/doc/namer.R                        |    2 
 inst/doc/namer.Rmd                      |   17 +++++++
 inst/doc/namer.html                     |   24 ++++++++--
 inst/examples/example4.Rmd              |    4 +
 man/unname_all_chunks.Rd                |   20 +++++++--
 tests/testthat/test-unname_all_chunks.R |   70 +++++++++++++++++++++++++++++++-
 vignettes/namer.Rmd                     |   17 +++++++
 12 files changed, 201 insertions(+), 37 deletions(-)

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Package Hmsc updated to version 3.0-4 with previous version 3.0-2 dated 2019-10-13

Title: Hierarchical Model of Species Communities
Description: Hierarchical Modelling of Species Communities (HMSC) is a model-based approach for analyzing community ecological data. This package implements it in the Bayesian framework with Gibbs Markov chain Monte Carlo (MCMC) sampling.
Author: Gleb Tikhonov [aut], Otso Ovaskainen [aut, cre] (<https://orcid.org/0000-0001-9750-4421>), Jari Oksanen [aut], Melinda de Jonge [aut], Oystein Opedal [aut], Tad Dallas [aut]
Maintainer: Otso Ovaskainen <otso.ovaskainen@helsinki.fi>

Diff between Hmsc versions 3.0-2 dated 2019-10-13 and 3.0-4 dated 2019-12-16

 DESCRIPTION                                |   10 -
 MD5                                        |   92 +++++++--------
 NAMESPACE                                  |    4 
 R/Hmsc.R                                   |   26 ++--
 R/alignPosterior.R                         |   15 +-
 R/biPlot.R                                 |   10 -
 R/computeInitialParameters.R               |    6 
 R/computePredictedValues.R                 |    4 
 R/computeVariancePartitioning.R            |    8 -
 R/computeWAIC.R                            |    2 
 R/constructGradient.R                      |   10 -
 R/evaluateModelFit.R                       |    5 
 R/plotBeta.R                               |   57 +++++----
 R/plotGamma.R                              |    2 
 R/plotGradient.R                           |    8 -
 R/predict.R                                |    6 
 R/sampleMcmc.R                             |    9 -
 R/samplePrior.R                            |    2 
 R/setPriors.HmscRandomLevel.R              |    2 
 R/updateBetaLambda.R                       |   10 -
 R/updateEta.R                              |   14 +-
 R/updateInvSigma.R                         |    4 
 R/updateZ.R                                |    2 
 R/updatewRRR.R                             |    6 
 README.md                                  |    6 
 inst/NEWS.md                               |only
 inst/README.md                             |only
 inst/doc/vignette_3_multivariate_high.pdf  |binary
 man/Hmsc.Rd                                |   32 ++++-
 man/HmscRandomLevel.Rd                     |   13 +-
 man/biPlot.Rd                              |   12 +
 man/computePredictedValues.Rd              |   19 ++-
 man/computeVariancePartitioning.Rd         |    9 +
 man/constructGradient.Rd                   |    3 
 man/constructKnots.Rd                      |    3 
 man/convertToCodaObject.Rd                 |   25 +++-
 man/getPostEstimate.Rd                     |   12 +
 man/plotBeta.Rd                            |   31 +++--
 man/plotGamma.Rd                           |   24 ++-
 man/plotGradient.Rd                        |   20 ++-
 man/poolMcmcChains.Rd                      |    3 
 man/predict.Hmsc.Rd                        |   22 ++-
 man/predictLatentFactor.Rd                 |   11 +
 man/sampleMcmc.Rd                          |   24 ++-
 man/setPriors.Hmsc.Rd                      |   21 ++-
 man/setPriors.HmscRandomLevel.Rd           |   16 ++
 tests/Examples/Hmsc-Ex.Rout.save           |  135 +++-------------------
 vignettes/vignette_3_multivariate_high.Rmd |  176 ++++++++++++++++++++---------
 48 files changed, 557 insertions(+), 374 deletions(-)

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Package FMradio updated to version 1.1.1 with previous version 1.1 dated 2019-05-03

Title: Factor Modeling for Radiomics Data
Description: Functions that support stable prediction and classification with radiomics data through factor-analytic modeling. For details, see Peeters et al. (2019) <arXiv:1903.11696>.
Author: Carel F.W. Peeters [cre, aut], Caroline Ubelhor [ctb], Kevin Kunzmann [ctb]
Maintainer: Carel F.W. Peeters <cf.peeters@vumc.nl>

Diff between FMradio versions 1.1 dated 2019-05-03 and 1.1.1 dated 2019-12-16

 DESCRIPTION            |    9 +++++----
 MD5                    |   10 +++++-----
 R/FMradio.R            |   14 +++++++-------
 README.md              |    3 +++
 man/FMradio-package.Rd |    3 ++-
 man/radioHeat.Rd       |    2 +-
 6 files changed, 23 insertions(+), 18 deletions(-)

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New package swissparl with initial version 0.2.0
Package: swissparl
Type: Package
Title: Interface to the Webservices of the Swiss Parliament
Version: 0.2.0
Authors@R: c(person("David", "Zumbach", , "david.zumbach@gfzb.ch", c("aut", "cre")), person("Benjamin", "Gföhler", role = "ctb"))
Description: Retrieves the most important data on parliamentary activities of the Swiss Federal Assembly via an open, machine-readable interface (see <https://ws.parlament.ch/odata.svc/>).
URL: https://www.parlament.ch/en/services/open-data-webservices
BugReports: https://github.com/zumbov2/swissparl/issues
License: GPL (>= 2)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.2
Imports: dplyr, jsonlite, magrittr, purrr, stringr, tibble, tidyr, lubridate, crayon, httr, ggplot2
NeedsCompilation: no
Packaged: 2019-12-15 16:34:52 UTC; david
Author: David Zumbach [aut, cre], Benjamin Gföhler [ctb]
Maintainer: David Zumbach <david.zumbach@gfzb.ch>
Repository: CRAN
Date/Publication: 2019-12-16 11:50:02 UTC

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New package SpatialKDE with initial version 0.5.0
Package: SpatialKDE
Type: Package
Title: Kernel Density Estimation for Spatial Data
Version: 0.5.0
URL: https://jancaha.github.io/SpatialKDE/index.html, https://github.com/JanCaha/SpatialKDE
Authors@R: person(given = "Jan", family = "Caha", role = c("aut", "cre"), email = "jan.caha@outlook.com", comment = c(ORCID = "0000-0003-0165-0606"))
Description: Calculate Kernel Density Estimation (KDE) for spatial data. The algorithm is inspired by the tool 'Heatmap' from 'QGIS'. The method is described by: Hart, T., Zandbergen, P. (2014) <doi:10.1108/PIJPSM-04-2013-0039>, Nelson, T. A., Boots, B. (2008) <doi:10.1111/j.0906-7590.2008.05548.x>, Chainey, S., Tompson, L., Uhlig, S.(2008) <doi:10.1057/palgrave.sj.8350066>.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.2
VignetteBuilder: knitr
LinkingTo: Rcpp
Imports: Rcpp, sf, dplyr, glue, magrittr, rlang, methods, raster
Suggests: tmap, sp, knitr, testthat (>= 2.1.0)
NeedsCompilation: yes
Packaged: 2019-12-16 08:14:56 UTC; Caha
Author: Jan Caha [aut, cre] (<https://orcid.org/0000-0003-0165-0606>)
Maintainer: Jan Caha <jan.caha@outlook.com>
Repository: CRAN
Date/Publication: 2019-12-16 11:40:06 UTC

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New package rpart.LAD with initial version 0.1.0
Package: rpart.LAD
Type: Package
Title: Least Absolute Deviation Regression Trees
Version: 0.1.0
Date: 2019-12-15
Author: Stephan Dlugosz [aut,cre]
Maintainer: Stephan Dlugosz <stephan.dlugosz@googlemail.com>
Description: Recursive partitioning for least absolute deviation regression trees. Another algorithm from the 1984 book by Breiman, Friedman, Olshen and Stone in addition to the 'rpart' package (Breiman, Friedman, Olshen, Stone (1984, ISBN:9780412048418).
License: GPL-3
NeedsCompilation: yes
Depends: R (>= 3.0.2), Rcpp (>= 0.12.3), rpart (>= 3.1.0)
LinkingTo: Rcpp (>= 0.12.3)
SystemRequirements: C++11
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.2
Packaged: 2019-12-15 18:43:36 UTC; Stephan
Repository: CRAN
Date/Publication: 2019-12-16 11:50:05 UTC

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Package repr updated to version 1.0.2 with previous version 1.0.1 dated 2019-05-14

Title: Serializable Representations
Description: String and binary representations of objects for several formats / mime types.
Author: Philipp Angerer [aut, cre] (<https://orcid.org/0000-0002-0369-2888>), Thomas Kluyver [aut], Jan Schulz [aut], abielr [ctb], Denilson Figueiredo de Sa [ctb], Jim Hester [ctb], karldw [ctb], Dave Foster [ctb], Carson Sievert [ctb]
Maintainer: Philipp Angerer <phil.angerer@gmail.com>

Diff between repr versions 1.0.1 dated 2019-05-14 and 1.0.2 dated 2019-12-16

 repr-1.0.1/repr/man/repr_vega-open-paren-4-slash-lite2-close-paren-.-times.Rd |only
 repr-1.0.2/repr/DESCRIPTION                                                   |    8 +-
 repr-1.0.2/repr/MD5                                                           |   20 +++---
 repr-1.0.2/repr/NAMESPACE                                                     |    6 ++
 repr-1.0.2/repr/R/generics.r                                                  |   29 +++++++++
 repr-1.0.2/repr/R/repr_matrix_df.r                                            |   10 +--
 repr-1.0.2/repr/R/repr_vega.r                                                 |    4 -
 repr-1.0.2/repr/R/utils.r                                                     |    6 +-
 repr-1.0.2/repr/man/repr-generics.Rd                                          |   18 ++++++
 repr-1.0.2/repr/man/repr_vega-times.Rd                                        |only
 repr-1.0.2/repr/tests/testthat/test_escaping.r                                |    4 -
 repr-1.0.2/repr/tests/testthat/test_repr_array_df.r                           |   30 ++++++++++
 12 files changed, 110 insertions(+), 25 deletions(-)

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New package PAFway with initial version 0.1.2
Package: PAFway
Type: Package
Title: Pairwise Association of Functional Annotations
Version: 0.1.2
Authors@R: c(person(given = "Daphne", family = "Ezer", role = c("aut", "cre"), email="daphne.ezer@york.ac.uk"), person(given = "Mahair", family = "Mahjoub", role = c("aut"), email="mahiarmahjoub@gmail.com"))
Description: Finds pairs of functional annotations or gene ontology (GO) terms that are enriched within a directed network (such as a gene regulatory network). This works with or without edge weights and includes visualizations (both as a network where the functions are nodes and as a heatmap). PAFway is an acronym for Pairwise Associations of Functional annotations in biological networks and pathWAYs.
License: GPL (>= 2)
Encoding: UTF-8
LazyData: true
Imports: igraph, gplots, ggplot2, GGally, network, sna, scales, stats, grDevices
RoxygenNote: 6.1.1
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2019-12-09 10:56:14 UTC; dezer
Author: Daphne Ezer [aut, cre], Mahair Mahjoub [aut]
Maintainer: Daphne Ezer <daphne.ezer@york.ac.uk>
Repository: CRAN
Date/Publication: 2019-12-16 11:50:10 UTC

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New package msgr with initial version 1.1.2
Package: msgr
Title: Extends Messages, Warnings and Errors by Adding Levels and Log Files
Version: 1.1.2
Authors@R: person("Chad" , "Goymer", email = "chad.goymer@gmail.com" , role = c("aut", "cre"))
Description: Provides new functions info(), warn() and error(), similar to message(), warning() and stop() respectively. However, the new functions can have a 'level' associated with them, so that when executed the global level option determines whether they are shown or not. This allows debug modes, outputting more information. The can also output all messages to a log file.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Language: en-GB
RoxygenNote: 7.0.2
Imports: rlang, purrr
Suggests: testthat, covr
URL: https://github.com/ChadGoymer/msgr
BugReports: https://github.com/ChadGoymer/msgr/issues
NeedsCompilation: no
Packaged: 2019-12-16 07:58:14 UTC; Chad
Author: Chad Goymer [aut, cre]
Maintainer: Chad Goymer <chad.goymer@gmail.com>
Repository: CRAN
Date/Publication: 2019-12-16 11:40:02 UTC

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New package MSCquartets with initial version 1.0.5
Package: MSCquartets
Title: Analyzing Gene Tree Quartets under the Multi-Species Coalescent
Version: 1.0.5
Authors@R: c(person("Elizabeth", "Allman", email ="e.allman@alaska.edu", role = "aut"), person("Hector", "Banos", email = "hbanos@gatech.edu", role = "aut"), person("Jonathan", "Mitchell", email = "jonathanmitchell88@gmail.com", role = "aut"), person("John", "Rhodes", email = "j.rhodes@alaska.edu", role = c("aut", "cre")) )
Description: Methods for analyzing and using quartets displayed on a collection of gene trees, primarily to make inferences about the species tree or network under the multi-species coalescent model. These include quartet hypothesis tests for the model, as developed by Mitchell et al. (2019) <doi:10.1214/19-EJS1576>, the species tree inference routines based on quartet distances of Rhodes (2019) <doi:10.1109/TCBB.2019.2917204> and Yourdkhani and Rhodes (2019), and the NANUQ algorithm for inference of level-1 species networks of Allman et al. (2019) <arXiv:1905.07050>.
License: MIT + file LICENSE
Imports: RandomFieldsUtils, zipfR, graphics, stats, Rdpack
RdMacros: Rdpack
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
NeedsCompilation: no
Packaged: 2019-12-15 19:21:29 UTC; johnrhodes
Author: Elizabeth Allman [aut], Hector Banos [aut], Jonathan Mitchell [aut], John Rhodes [aut, cre]
Maintainer: John Rhodes <j.rhodes@alaska.edu>
Depends: R (>= 3.2.0), ape (>= 5.0), phangorn
Repository: CRAN
Date/Publication: 2019-12-16 11:50:13 UTC

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New package dBlockmodeling with initial version 0.1.1
Package: dBlockmodeling
Type: Package
Title: Deterministic Blockmodeling of Signed and Two-Mode Networks
Version: 0.1.1
Authors@R: c(person(given = "Michael", family = "Brusco", email = "mbrusco@business.fsu.edu", role = "aut"), person(given = "Aleš", family = "Žiberna", email = "ales.ziberna@fdv.uni-lj.si", role = "cre"), person(given = "Marjan", family = "Cugmas", email = "marjan.cugmas@fdv.uni-lj.si", role = "ctb"), person(given = "Patrick", family = "Doreian", email = "pitpat@pitt.edu", role = "ctb"), person(given = "Doug", family = "Steinley", email = "steinleyd@missouri.edu", role = "ctb"))
Maintainer: Aleš Žiberna <ales.ziberna@fdv.uni-lj.si>
Description: It contains functions to apply blockmodeling of signed (positive and negative weights are assigned to the links) and two-mode (two sets of nodes are considered, e.g. employees and organizations) networks (Brusco et al. (2019) <doi:10.1111/bmsp.12192>).
License: GPL (>= 2)
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
NeedsCompilation: yes
Packaged: 2019-12-09 10:31:48 UTC; zibernaa
Author: Michael Brusco [aut], Aleš Žiberna [cre], Marjan Cugmas [ctb], Patrick Doreian [ctb], Doug Steinley [ctb]
Repository: CRAN
Date/Publication: 2019-12-16 11:50:07 UTC

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Package ctl updated to version 1.0.0-4 with previous version 1.0.0-2 dated 2018-08-03

Title: Correlated Trait Locus Mapping
Description: Identification and network inference of genetic loci associated with correlation changes in quantitative traits (called correlated trait loci, CTLs). Arends et al. (2016) <doi:10.21105/joss.00087>.
Author: Danny Arends <Danny.Arends@gmail.com>, Yang Li, Gudrun A Brockmann, Ritsert C Jansen, Robert W Williams, and Pjotr Prins
Maintainer: Danny Arends <Danny.Arends@gmail.com>

Diff between ctl versions 1.0.0-2 dated 2018-08-03 and 1.0.0-4 dated 2019-12-16

 DESCRIPTION           |   19 ++++++++++-------
 MD5                   |   29 +++++++++++++-------------
 NAMESPACE             |    3 +-
 R/ctl.effects.R       |only
 R/ctl.image.R         |   30 +++++++++++++--------------
 R/ctl.lineplot.R      |    2 -
 R/ctl.network.R       |    2 -
 R/ctl.plot.R          |    2 -
 R/ctl.scan.R          |    8 +++----
 R/ctl.statistics.R    |    4 +--
 inst/doc/manual.pdf   |binary
 man/ctl-internal.Rd   |    4 +++
 man/ctl.image.Rd      |    6 ++---
 man/qtl.image.Rd      |    6 +++--
 src/correlation.c     |   55 ++++++++++++++++++++++++++++----------------------
 tests/test_ctl_long.R |    6 ++---
 16 files changed, 97 insertions(+), 79 deletions(-)

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Package Spbsampling updated to version 1.3.1 with previous version 1.3.0 dated 2019-08-04

Title: Spatially Balanced Sampling
Description: Selection of spatially balanced samples. In particular, the implemented sampling designs allow to select probability samples well spread over the population of interest, in any dimension and using any distance function (e.g. Euclidean distance, Manhattan distance). For more details, Benedetti R and Piersimoni F (2017) <doi:10.1002/bimj.201600194> and Benedetti R and Piersimoni F (2017) <arXiv:1710.09116>. The implementation has been done in C++ through the use of 'Rcpp' and 'RcppArmadillo'.
Author: Francesco Pantalone [aut, cre], Roberto Benedetti [aut], Federica Piersimoni [aut]
Maintainer: Francesco Pantalone <pantalone.fra@gmail.com>

Diff between Spbsampling versions 1.3.0 dated 2019-08-04 and 1.3.1 dated 2019-12-16

 DESCRIPTION         |    6 +++---
 MD5                 |   29 +++++++++++++++--------------
 NEWS.md             |    9 ++++++++-
 R/RcppExports.R     |   48 ++++++++++++++++++++++++------------------------
 inst/CITATION       |only
 man/hpwd.Rd         |    8 ++++----
 man/pwd.Rd          |    8 ++++----
 man/stprod.Rd       |    8 ++++----
 man/stsum.Rd        |    6 +++---
 man/swd.Rd          |    8 ++++----
 src/RcppExports.cpp |   40 ++++++++++++++++++++--------------------
 src/hpwd.cpp        |   14 +++++++-------
 src/pwd.cpp         |   16 ++++++++--------
 src/stprod.cpp      |   16 ++++++++--------
 src/stsum.cpp       |   18 +++++++++---------
 src/swd.cpp         |   16 ++++++++--------
 16 files changed, 129 insertions(+), 121 deletions(-)

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Package RMixtCompIO updated to version 4.0.2 with previous version 4.0.1 dated 2019-09-02

Title: Mixture Models with Heterogeneous and (Partially) Missing Data
Description: Mixture Composer <https://github.com/modal-inria/MixtComp> is a project to build mixture models with heterogeneous data sets and partially missing data management. It includes models for real, categorical, counting, functional and ranking data. This package contains the minimal R interface of the C++ 'MixtComp' library.
Author: Vincent Kubicki [aut], Christophe Biernacki [aut], Quentin Grimonprez [aut, cre], Serge Iovleff [ctb], Matthieu Marbac-Lourdelle [ctb], Étienne Goffinet [ctb], Patrick Wieschollek [ctb] (for CppOptimizationLibrary), Tobias Wood [ctb] (for CppOptimizationLibrary)
Maintainer: Quentin Grimonprez <quentin.grimonprez@inria.fr>

Diff between RMixtCompIO versions 4.0.1 dated 2019-09-02 and 4.0.2 dated 2019-12-16

 RMixtCompIO-4.0.1/RMixtCompIO/inst/doc                                              |only
 RMixtCompIO-4.0.2/RMixtCompIO/DESCRIPTION                                           |   14 +--
 RMixtCompIO-4.0.2/RMixtCompIO/MD5                                                   |   39 ++++----
 RMixtCompIO-4.0.2/RMixtCompIO/NAMESPACE                                             |    1 
 RMixtCompIO-4.0.2/RMixtCompIO/NEWS                                                  |    5 +
 RMixtCompIO-4.0.2/RMixtCompIO/R/RMixtCompIO-package.R                               |    2 
 RMixtCompIO-4.0.2/RMixtCompIO/R/TEST_paramModel.R                                   |    6 -
 RMixtCompIO-4.0.2/RMixtCompIO/R/rmcMultiRun.R                                       |   45 ++++------
 RMixtCompIO-4.0.2/RMixtCompIO/man/rmcMultiRun.Rd                                    |   11 ++
 RMixtCompIO-4.0.2/RMixtCompIO/src/lib/Composer/MixtureComposer.cpp                  |    3 
 RMixtCompIO-4.0.2/RMixtCompIO/src/lib/Composer/MixtureComposer.h                    |    2 
 RMixtCompIO-4.0.2/RMixtCompIO/src/lib/Manager/createAllMixtures.h                   |    3 
 RMixtCompIO-4.0.2/RMixtCompIO/src/lib/Mixture/Rank/RankMixture.h                    |    2 
 RMixtCompIO-4.0.2/RMixtCompIO/src/optim/BUILD                                       |    2 
 RMixtCompIO-4.0.2/RMixtCompIO/src/optim/include/cppoptlib/solver/lbfgsbsolver.h     |   13 ++
 RMixtCompIO-4.0.2/RMixtCompIO/src/optim/include/cppoptlib/solver/neldermeadsolver.h |    6 -
 RMixtCompIO-4.0.2/RMixtCompIO/src/optim/src/examples/nonnegls2.cpp                  |only
 RMixtCompIO-4.0.2/RMixtCompIO/src/optim/src/examples/rosenbrock.cpp                 |    4 
 RMixtCompIO-4.0.2/RMixtCompIO/src/optim/src/examples/rosenbrock_float.cpp           |    4 
 RMixtCompIO-4.0.2/RMixtCompIO/tests/testthat/test.run.R                             |    6 -
 RMixtCompIO-4.0.2/RMixtCompIO/tests/testthat/test.simpleRun.R                       |    2 
 21 files changed, 96 insertions(+), 74 deletions(-)

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New package smoke with initial version 1.0.1
Package: smoke
Type: Package
Title: Small Molecule Octet/BLI Kinetics Experiment
Version: 1.0.1
Date: 2019-12-08
Author: Qingan Sun, Xiaojun Li, James C Sacchettini
Maintainer: Qingan Sun <quinsun@gmail.com>
Description: Bio-Layer Interferometry (BLI) is a technology to determine the binding kinetics between biomolecule. BLI signals are small and noisy when small molecule ligands are investigated. We develop this package to process and analyze the BLI data acquired on Octet Red96 (Fortebio) more accurately.
License: GPL-2 | GPL-3
Depends: R (>= 3.6.0),methods,graphics, grDevices, stats, utils
LazyData: yes
NeedsCompilation: no
Packaged: 2019-12-15 16:13:13 UTC; q-sun
Repository: CRAN
Date/Publication: 2019-12-16 10:00:02 UTC

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Package rstatix updated to version 0.3.1 with previous version 0.3.0 dated 2019-11-14

Title: Pipe-Friendly Framework for Basic Statistical Tests
Description: Provides a simple and intuitive pipe-friendly framework, coherent with the 'tidyverse' design philosophy, for performing basic statistical tests, including t-test, Wilcoxon test, ANOVA, Kruskal-Wallis and correlation analyses. The output of each test is automatically transformed into a tidy data frame to facilitate visualization. Additional functions are available for reshaping, reordering, manipulating and visualizing correlation matrix. Functions are also included to facilitate the analysis of factorial experiments, including purely 'within-Ss' designs (repeated measures), purely 'between-Ss' designs, and mixed 'within-and-between-Ss' designs. It's also possible to compute several effect size metrics, including "eta squared" for ANOVA, "Cohen's d" for t-test and 'Cramer V' for the association between categorical variables. The package contains helper functions for identifying univariate and multivariate outliers, assessing normality and homogeneity of variances.
Author: Alboukadel Kassambara [aut, cre]
Maintainer: Alboukadel Kassambara <alboukadel.kassambara@gmail.com>

Diff between rstatix versions 0.3.0 dated 2019-11-14 and 0.3.1 dated 2019-12-16

 DESCRIPTION                |   13 ++++---
 MD5                        |   78 ++++++++++++++++++++++-----------------------
 NEWS.md                    |   12 ++++++
 R/anova_test.R             |    8 ++--
 R/binom_test.R             |    6 +--
 R/chisq_test.R             |    2 -
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More information about rstatix at CRAN
Permanent link

Package rmdformats updated to version 0.3.6 with previous version 0.3.5 dated 2019-02-19

Title: HTML Output Formats and Templates for 'rmarkdown' Documents
Description: HTML formats and templates for 'rmarkdown' documents, with some extra features such as automatic table of contents, lightboxed figures, dynamic crosstab helper.
Author: Julien Barnier [aut, cre]
Maintainer: Julien Barnier <julien.barnier@ens-lyon.fr>

Diff between rmdformats versions 0.3.5 dated 2019-02-19 and 0.3.6 dated 2019-12-16

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More information about rmdformats at CRAN
Permanent link

Package pomdp updated to version 0.9.2 with previous version 0.9.1-1 dated 2019-05-14

Title: Solver for Partially Observable Markov Decision Processes (POMDP)
Description: Provides an interface to pomdp-solve, a solver for Partially Observable Markov Decision Processes (POMDP). The package enables the user to simply define all components of a POMDP model and solve the problem using several methods. The package also contains functions to analyze and visualize the POMDP solutions (e.g., the optimal policy).
Author: Hossein Kamalzadeh [aut, cph, cre], Michael Hahsler [aut, cph], Anthony R. Cassandra [ctb, cph]
Maintainer: Hossein Kamalzadeh <hkamalzadeh@smu.edu>

Diff between pomdp versions 0.9.1-1 dated 2019-05-14 and 0.9.2 dated 2019-12-16

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 35 files changed, 880 insertions(+), 814 deletions(-)

More information about pomdp at CRAN
Permanent link

New package hardhat with initial version 0.1.0
Package: hardhat
Title: Construct Modeling Packages
Version: 0.1.0
Authors@R: c( person("Davis", "Vaughan", , "davis@rstudio.com", c("aut", "cre")), person("Max", "Kuhn", , "max@rstudio.com", c("aut")), person("RStudio", role = "cph"))
Maintainer: Davis Vaughan <davis@rstudio.com>
Description: Building modeling packages is hard. A large amount of effort generally goes into providing an implementation for a new method that is efficient, fast, and correct, but often less emphasis is put on the user interface. A good interface requires specialized knowledge about S3 methods and formulas, which the average package developer might not have. The goal of 'hardhat' is to reduce the burden around building new modeling packages by providing functionality for preprocessing, predicting, and validating input.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.1
Suggests: recipes, testthat (>= 2.1.0), covr, knitr, rmarkdown, usethis, roxygen2, devtools
Imports: glue, rlang (>= 0.4.1), tibble, vctrs (>= 0.2.0)
URL: https://github.com/tidymodels/hardhat
BugReports: https://github.com/tidymodels/hardhat/issues
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2019-12-06 18:56:43 UTC; davis
Author: Davis Vaughan [aut, cre], Max Kuhn [aut], RStudio [cph]
Repository: CRAN
Date/Publication: 2019-12-16 10:00:09 UTC

More information about hardhat at CRAN
Permanent link

Package dfadjust updated to version 1.0.1 with previous version 1.0.0 dated 2019-08-23

Title: Degrees of Freedom Adjustment for Robust Standard Errors
Description: Computes small-sample degrees of freedom adjustment for heteroskedasticity robust standard errors, and for clustered standard errors in linear regression. See Imbens and Kolesár (2016) <doi:10.1162/REST_a_00552> for a discussion of these adjustments.
Author: Michal Kolesár [aut, cre] (<https://orcid.org/0000-0002-2482-7796>)
Maintainer: Michal Kolesár <kolesarmi@googlemail.com>

Diff between dfadjust versions 1.0.0 dated 2019-08-23 and 1.0.1 dated 2019-12-16

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 dfadjust-1.0.1/dfadjust/tests/testthat/test-hc2-check.R |   33 ++++++++++------
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More information about dfadjust at CRAN
Permanent link

Package BH updated to version 1.72.0-1 with previous version 1.69.0-1 dated 2019-01-07

Title: Boost C++ Header Files
Description: Boost provides free peer-reviewed portable C++ source libraries. A large part of Boost is provided as C++ template code which is resolved entirely at compile-time without linking. This package aims to provide the most useful subset of Boost libraries for template use among CRAN packages. By placing these libraries in this package, we offer a more efficient distribution system for CRAN as replication of this code in the sources of other packages is avoided. As of release 1.69.0-1, the following Boost libraries are included: 'algorithm' 'align' 'any' 'atomic' 'bimap' 'bind' 'circular_buffer' 'compute' 'concept' 'config' 'container' 'date_time' 'detail' 'dynamic_bitset' 'exception' 'filesystem' 'flyweight' 'foreach' 'functional' 'fusion' 'geometry' 'graph' 'heap' 'icl' 'integer' 'interprocess' 'intrusive' 'io' 'iostreams' 'iterator' 'math' 'move' 'mpl' 'multiprcecision' 'numeric' 'pending' 'phoenix' 'preprocessor' 'propery_tree' 'random' 'range' 'scope_exit' 'smart_ptr' 'sort' 'spirit' 'tuple' 'type_traits' 'typeof' 'unordered' 'utility' 'uuid'.
Author: Dirk Eddelbuettel, John W. Emerson and Michael J. Kane
Maintainer: Dirk Eddelbuettel <edd@debian.org>

Diff between BH versions 1.69.0-1 dated 2019-01-07 and 1.72.0-1 dated 2019-12-16

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 BH-1.72.0-1/BH/ChangeLog                                                                                       |   19 
 BH-1.72.0-1/BH/DESCRIPTION                                                                                     |   10 
 BH-1.72.0-1/BH/MD5                                                                                             | 4761 ++--
 BH-1.72.0-1/BH/README.md                                                                                       |   10 
 BH-1.72.0-1/BH/build/partial.rdb                                                                               |binary
 BH-1.72.0-1/BH/inst/NEWS.Rd                                                                                    |   11 
 BH-1.72.0-1/BH/inst/include/boost/accumulators/accumulators_fwd.hpp                                            |   66 
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 BH-1.72.0-1/BH/inst/include/boost/algorithm/algorithm.hpp                                                      |    1 
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 BH-1.72.0-1/BH/inst/include/boost/algorithm/clamp.hpp                                                          |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx11/all_of.hpp                                                   |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx11/any_of.hpp                                                   |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx11/copy_if.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx11/copy_n.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx11/find_if_not.hpp                                              |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx11/iota.hpp                                                     |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx11/is_partitioned.hpp                                           |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx11/is_permutation.hpp                                           |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx11/is_sorted.hpp                                                |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx11/none_of.hpp                                                  |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx11/one_of.hpp                                                   |    6 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx11/partition_point.hpp                                          |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx14/equal.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx14/is_permutation.hpp                                           |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx14/mismatch.hpp                                                 |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx17/exclusive_scan.hpp                                           |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx17/for_each_n.hpp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx17/inclusive_scan.hpp                                           |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx17/reduce.hpp                                                   |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx17/transform_exclusive_scan.hpp                                 |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx17/transform_inclusive_scan.hpp                                 |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/cxx17/transform_reduce.hpp                                         |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/find_backward.hpp                                                  |    7 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/find_not.hpp                                                       |    7 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/gather.hpp                                                         |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/hex.hpp                                                            |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/is_palindrome.hpp                                                  |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/is_partitioned_until.hpp                                           |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/minmax.hpp                                                         |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/minmax_element.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/searching/boyer_moore.hpp                                          |    1 
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 BH-1.72.0-1/BH/inst/include/boost/algorithm/searching/knuth_morris_pratt.hpp                                   |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/sort_subrange.hpp                                                  |    1 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/string/iter_find.hpp                                               |    8 
 BH-1.72.0-1/BH/inst/include/boost/algorithm/string/split.hpp                                                   |   12 
 BH-1.72.0-1/BH/inst/include/boost/align/align_down.hpp                                                         |    8 
 BH-1.72.0-1/BH/inst/include/boost/align/align_up.hpp                                                           |    8 
 BH-1.72.0-1/BH/inst/include/boost/align/aligned_allocator.hpp                                                  |   41 
 BH-1.72.0-1/BH/inst/include/boost/align/aligned_allocator_adaptor.hpp                                          |    4 
 BH-1.72.0-1/BH/inst/include/boost/align/alignment_of.hpp                                                       |    4 
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 BH-1.72.0-1/BH/inst/include/boost/align/detail/integral_constant.hpp                                           |    5 
 BH-1.72.0-1/BH/inst/include/boost/align/detail/is_aligned.hpp                                                  |    4 
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 BH-1.72.0-1/BH/inst/include/boost/any.hpp                                                                      |   13 
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 BH-1.72.0-1/BH/inst/include/boost/archive/iterators/wchar_from_mb.hpp                                          |    4 
 BH-1.72.0-1/BH/inst/include/boost/array.hpp                                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio.hpp                                                                     |   29 
 BH-1.72.0-1/BH/inst/include/boost/asio/associated_allocator.hpp                                                |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/associated_executor.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/async_result.hpp                                                        |  496 
 BH-1.72.0-1/BH/inst/include/boost/asio/awaitable.hpp                                                           |only
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_datagram_socket.hpp                                               |  690 
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_deadline_timer.hpp                                                |  295 
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_io_object.hpp                                                     |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_raw_socket.hpp                                                    |  692 
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_seq_packet_socket.hpp                                             |  426 
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_serial_port.hpp                                                   |  413 
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_signal_set.hpp                                                    |  309 
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_socket.hpp                                                        |  591 
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_socket_acceptor.hpp                                               | 1437 -
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_socket_iostream.hpp                                               |   65 
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_socket_streambuf.hpp                                              |   50 
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_stream_socket.hpp                                                 |  524 
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_streambuf.hpp                                                     |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_streambuf_fwd.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/basic_waitable_timer.hpp                                                |  302 
 BH-1.72.0-1/BH/inst/include/boost/asio/bind_executor.hpp                                                       |   33 
 BH-1.72.0-1/BH/inst/include/boost/asio/buffer.hpp                                                              |  495 
 BH-1.72.0-1/BH/inst/include/boost/asio/buffered_read_stream.hpp                                                |   50 
 BH-1.72.0-1/BH/inst/include/boost/asio/buffered_read_stream_fwd.hpp                                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/buffered_stream.hpp                                                     |   61 
 BH-1.72.0-1/BH/inst/include/boost/asio/buffered_stream_fwd.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/buffered_write_stream.hpp                                               |   50 
 BH-1.72.0-1/BH/inst/include/boost/asio/buffered_write_stream_fwd.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/buffers_iterator.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/co_spawn.hpp                                                            |only
 BH-1.72.0-1/BH/inst/include/boost/asio/completion_condition.hpp                                                |    2 
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 BH-1.72.0-1/BH/inst/include/boost/asio/connect.hpp                                                             |  220 
 BH-1.72.0-1/BH/inst/include/boost/asio/coroutine.hpp                                                           |    6 
 BH-1.72.0-1/BH/inst/include/boost/asio/deadline_timer.hpp                                                      |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/defer.hpp                                                               |   38 
 BH-1.72.0-1/BH/inst/include/boost/asio/detached.hpp                                                            |only
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/array.hpp                                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/array_fwd.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/assert.hpp                                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/atomic_count.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/base_from_completion_cond.hpp                                    |    7 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/bind_handler.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/buffer_resize_guard.hpp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/buffer_sequence_adapter.hpp                                      |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/buffered_stream_storage.hpp                                      |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/call_stack.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/chrono.hpp                                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/chrono_time_traits.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/completion_handler.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/concurrency_hint.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/conditionally_enabled_event.hpp                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/conditionally_enabled_mutex.hpp                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/config.hpp                                                       |  114 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/consuming_buffers.hpp                                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/cstddef.hpp                                                      |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/cstdint.hpp                                                      |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/date_time_fwd.hpp                                                |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/deadline_timer_service.hpp                                       |   22 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/dependent_type.hpp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/descriptor_ops.hpp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/descriptor_read_op.hpp                                           |   16 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/descriptor_write_op.hpp                                          |   16 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/dev_poll_reactor.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/epoll_reactor.hpp                                                |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/event.hpp                                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/eventfd_select_interrupter.hpp                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/executor_function.hpp                                            |only
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/executor_op.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/fd_set_adapter.hpp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/fenced_block.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/functional.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/future.hpp                                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/gcc_arm_fenced_block.hpp                                         |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/gcc_hppa_fenced_block.hpp                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/gcc_sync_fenced_block.hpp                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/gcc_x86_fenced_block.hpp                                         |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/global.hpp                                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/handler_alloc_helpers.hpp                                        |   19 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/handler_cont_helpers.hpp                                         |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/handler_invoke_helpers.hpp                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/handler_tracking.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/handler_type_requirements.hpp                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/handler_work.hpp                                                 |   34 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/hash_map.hpp                                                     |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/buffer_sequence_adapter.ipp                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/descriptor_ops.ipp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/dev_poll_reactor.hpp                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/dev_poll_reactor.ipp                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/epoll_reactor.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/epoll_reactor.ipp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/eventfd_select_interrupter.ipp                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/handler_tracking.ipp                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/kqueue_reactor.hpp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/kqueue_reactor.ipp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/null_event.ipp                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/pipe_select_interrupter.ipp                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/posix_event.ipp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/posix_mutex.ipp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/posix_thread.ipp                                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/posix_tss_ptr.ipp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/reactive_descriptor_service.ipp                             |    8 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/reactive_serial_port_service.ipp                            |    8 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/reactive_socket_service_base.ipp                            |    8 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/resolver_service_base.ipp                                   |   64 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/scheduler.ipp                                               |   54 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/select_reactor.hpp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/select_reactor.ipp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/service_registry.hpp                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/service_registry.ipp                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/signal_set_service.ipp                                      |   42 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/socket_ops.ipp                                              |    9 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/socket_select_interrupter.ipp                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/strand_executor_service.hpp                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/strand_executor_service.ipp                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/strand_service.hpp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/strand_service.ipp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/throw_error.ipp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/timer_queue_ptime.ipp                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/timer_queue_set.ipp                                         |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/win_event.ipp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/win_iocp_handle_service.ipp                                 |   12 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/win_iocp_io_context.hpp                                     |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/win_iocp_io_context.ipp                                     |   43 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/win_iocp_serial_port_service.ipp                            |   23 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/win_iocp_socket_service_base.ipp                            |   14 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/win_mutex.ipp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/win_object_handle_service.ipp                               |   35 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/win_static_mutex.ipp                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/win_thread.ipp                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/win_tss_ptr.ipp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/winrt_timer_scheduler.hpp                                   |    8 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/winrt_timer_scheduler.ipp                                   |   15 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/impl/winsock_init.ipp                                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/io_control.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/io_object_executor.hpp                                           |only
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/io_object_impl.hpp                                               |only
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/is_buffer_sequence.hpp                                           |   81 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/is_executor.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/keyword_tss_ptr.hpp                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/kqueue_reactor.hpp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/macos_fenced_block.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/memory.hpp                                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/mutex.hpp                                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/non_const_lvalue.hpp                                             |only
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/noncopyable.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/null_event.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/null_fenced_block.hpp                                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/null_global.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/null_mutex.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/null_reactor.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/null_signal_blocker.hpp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/null_socket_service.hpp                                          |  115 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/null_static_mutex.hpp                                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/null_thread.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/null_tss_ptr.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/object_pool.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/old_win_sdk_compat.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/op_queue.hpp                                                     |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/operation.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/pipe_select_interrupter.hpp                                      |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/pop_options.hpp                                                  |   14 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/posix_event.hpp                                                  |    4 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/posix_fd_set_adapter.hpp                                         |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/posix_global.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/posix_mutex.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/posix_signal_blocker.hpp                                         |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/posix_static_mutex.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/posix_thread.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/posix_tss_ptr.hpp                                                |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/push_options.hpp                                                 |   14 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactive_descriptor_service.hpp                                  |   53 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactive_null_buffers_op.hpp                                     |   14 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactive_serial_port_service.hpp                                 |   24 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactive_socket_accept_op.hpp                                    |   51 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactive_socket_connect_op.hpp                                   |   15 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactive_socket_recv_op.hpp                                      |   18 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactive_socket_recvfrom_op.hpp                                  |   16 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactive_socket_recvmsg_op.hpp                                   |   15 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactive_socket_send_op.hpp                                      |   18 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactive_socket_sendto_op.hpp                                    |   16 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactive_socket_service.hpp                                      |  117 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactive_socket_service_base.hpp                                 |   85 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactive_wait_op.hpp                                             |   14 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactor.hpp                                                      |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactor_fwd.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactor_op.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/reactor_op_queue.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/recycling_allocator.hpp                                          |   30 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/regex_fwd.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/resolve_endpoint_op.hpp                                          |   36 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/resolve_op.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/resolve_query_op.hpp                                             |   34 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/resolver_service.hpp                                             |   36 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/resolver_service_base.hpp                                        |   41 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/scheduler.hpp                                                    |   15 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/scheduler_operation.hpp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/scheduler_thread_info.hpp                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/scoped_lock.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/scoped_ptr.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/select_interrupter.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/select_reactor.hpp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/service_registry.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/signal_blocker.hpp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/signal_handler.hpp                                               |   14 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/signal_init.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/signal_op.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/signal_set_service.hpp                                           |   36 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/socket_holder.hpp                                                |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/socket_ops.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/socket_option.hpp                                                |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/socket_select_interrupter.hpp                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/socket_types.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/solaris_fenced_block.hpp                                         |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/static_mutex.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/std_event.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/std_fenced_block.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/std_global.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/std_mutex.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/std_static_mutex.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/std_thread.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/strand_executor_service.hpp                                      |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/strand_service.hpp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/string_view.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/thread.hpp                                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/thread_context.hpp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/thread_group.hpp                                                 |    8 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/thread_info_base.hpp                                             |   11 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/throw_error.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/throw_exception.hpp                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/timer_queue.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/timer_queue_base.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/timer_queue_ptime.hpp                                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/timer_queue_set.hpp                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/timer_scheduler.hpp                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/timer_scheduler_fwd.hpp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/tss_ptr.hpp                                                      |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/type_traits.hpp                                                  |    5 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/variadic_templates.hpp                                           |   34 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/wait_handler.hpp                                                 |   16 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/wait_op.hpp                                                      |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_event.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_fd_set_adapter.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_fenced_block.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_global.hpp                                                   |   13 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_handle_read_op.hpp                                      |   16 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_handle_service.hpp                                      |   72 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_handle_write_op.hpp                                     |   15 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_io_context.hpp                                          |   14 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_null_buffers_op.hpp                                     |   14 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_operation.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_overlapped_op.hpp                                       |   14 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_overlapped_ptr.hpp                                      |   42 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_serial_port_service.hpp                                 |   24 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_socket_accept_op.hpp                                    |   43 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_socket_connect_op.hpp                                   |   15 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_socket_recv_op.hpp                                      |   15 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_socket_recvfrom_op.hpp                                  |   16 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_socket_recvmsg_op.hpp                                   |   15 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_socket_send_op.hpp                                      |   15 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_socket_service.hpp                                      |  134 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_socket_service_base.hpp                                 |  103 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_thread_info.hpp                                         |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_iocp_wait_op.hpp                                             |   14 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_mutex.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_object_handle_service.hpp                                    |   35 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_static_mutex.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_thread.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/win_tss_ptr.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/winapp_thread.hpp                                                |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/wince_thread.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/winrt_async_manager.hpp                                          |   39 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/winrt_async_op.hpp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/winrt_resolve_op.hpp                                             |   15 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/winrt_resolver_service.hpp                                       |   54 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/winrt_timer_scheduler.hpp                                        |   26 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/winrt_utils.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/winsock_init.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/work_dispatcher.hpp                                              |    7 
 BH-1.72.0-1/BH/inst/include/boost/asio/detail/wrapped_handler.hpp                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/dispatch.hpp                                                            |   36 
 BH-1.72.0-1/BH/inst/include/boost/asio/error.hpp                                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/execution_context.hpp                                                   |    5 
 BH-1.72.0-1/BH/inst/include/boost/asio/executor.hpp                                                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/executor_work_guard.hpp                                                 |    4 
 BH-1.72.0-1/BH/inst/include/boost/asio/generic/basic_endpoint.hpp                                              |    4 
 BH-1.72.0-1/BH/inst/include/boost/asio/generic/datagram_protocol.hpp                                           |    8 
 BH-1.72.0-1/BH/inst/include/boost/asio/generic/detail/endpoint.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/generic/detail/impl/endpoint.ipp                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/generic/raw_protocol.hpp                                                |    8 
 BH-1.72.0-1/BH/inst/include/boost/asio/generic/seq_packet_protocol.hpp                                         |    8 
 BH-1.72.0-1/BH/inst/include/boost/asio/generic/stream_protocol.hpp                                             |    8 
 BH-1.72.0-1/BH/inst/include/boost/asio/handler_alloc_hook.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/handler_continuation_hook.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/handler_invoke_hook.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/high_resolution_timer.hpp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/awaitable.hpp                                                      |only
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/buffered_read_stream.hpp                                           |  156 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/buffered_write_stream.hpp                                          |  146 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/co_spawn.hpp                                                       |only
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/compose.hpp                                                        |only
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/connect.hpp                                                        |  486 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/defer.hpp                                                          |   90 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/detached.hpp                                                       |only
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/dispatch.hpp                                                       |   91 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/error.ipp                                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/execution_context.hpp                                              |   14 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/execution_context.ipp                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/executor.hpp                                                       |   31 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/executor.ipp                                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/handler_alloc_hook.ipp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/io_context.hpp                                                     |  134 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/io_context.ipp                                                     |    7 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/post.hpp                                                           |   90 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/read.hpp                                                           |  662 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/read_at.hpp                                                        |  211 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/read_until.hpp                                                     | 2258 +-
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/redirect_error.hpp                                                 |only
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/serial_port_base.hpp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/serial_port_base.ipp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/system_context.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/system_context.ipp                                                 |   11 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/system_executor.hpp                                                |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/thread_pool.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/thread_pool.ipp                                                    |   21 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/use_awaitable.hpp                                                  |only
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/use_future.hpp                                                     |   52 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/write.hpp                                                          |  613 
 BH-1.72.0-1/BH/inst/include/boost/asio/impl/write_at.hpp                                                       |  212 
 BH-1.72.0-1/BH/inst/include/boost/asio/io_context.hpp                                                          |   20 
 BH-1.72.0-1/BH/inst/include/boost/asio/io_context_strand.hpp                                                   |   96 
 BH-1.72.0-1/BH/inst/include/boost/asio/io_service.hpp                                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/io_service_strand.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/address.hpp                                                          |   62 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/address_v4.hpp                                                       |   58 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/address_v4_iterator.hpp                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/address_v4_range.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/address_v6.hpp                                                       |   77 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/address_v6_iterator.hpp                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/address_v6_range.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/bad_address_cast.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/basic_endpoint.hpp                                                   |   47 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/basic_resolver.hpp                                                   |  394 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/basic_resolver_entry.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/basic_resolver_iterator.hpp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/basic_resolver_query.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/basic_resolver_results.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/detail/endpoint.hpp                                                  |   40 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/detail/impl/endpoint.ipp                                             |   20 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/detail/socket_option.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/host_name.hpp                                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/icmp.hpp                                                             |   14 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/impl/address.hpp                                                     |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/impl/address.ipp                                                     |   41 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/impl/address_v4.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/impl/address_v4.ipp                                                  |   22 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/impl/address_v6.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/impl/address_v6.ipp                                                  |   52 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/impl/basic_endpoint.hpp                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/impl/host_name.ipp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/impl/network_v4.hpp                                                  |only
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/impl/network_v4.ipp                                                  |only
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/impl/network_v6.hpp                                                  |only
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/impl/network_v6.ipp                                                  |only
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/multicast.hpp                                                        |   16 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/network_v4.hpp                                                       |only
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/network_v6.hpp                                                       |only
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/resolver_base.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/resolver_query_base.hpp                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/tcp.hpp                                                              |   18 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/udp.hpp                                                              |   14 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/unicast.hpp                                                          |    6 
 BH-1.72.0-1/BH/inst/include/boost/asio/ip/v6_only.hpp                                                          |    6 
 BH-1.72.0-1/BH/inst/include/boost/asio/is_executor.hpp                                                         |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/is_read_buffered.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/is_write_buffered.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/local/basic_endpoint.hpp                                                |   12 
 BH-1.72.0-1/BH/inst/include/boost/asio/local/connect_pair.hpp                                                  |   33 
 BH-1.72.0-1/BH/inst/include/boost/asio/local/datagram_protocol.hpp                                             |    8 
 BH-1.72.0-1/BH/inst/include/boost/asio/local/detail/endpoint.hpp                                               |    8 
 BH-1.72.0-1/BH/inst/include/boost/asio/local/detail/impl/endpoint.ipp                                          |    9 
 BH-1.72.0-1/BH/inst/include/boost/asio/local/stream_protocol.hpp                                               |    8 
 BH-1.72.0-1/BH/inst/include/boost/asio/packaged_task.hpp                                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/placeholders.hpp                                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/posix/basic_descriptor.hpp                                              |  261 
 BH-1.72.0-1/BH/inst/include/boost/asio/posix/basic_stream_descriptor.hpp                                       |  250 
 BH-1.72.0-1/BH/inst/include/boost/asio/posix/descriptor.hpp                                                    |  617 
 BH-1.72.0-1/BH/inst/include/boost/asio/posix/descriptor_base.hpp                                               |    4 
 BH-1.72.0-1/BH/inst/include/boost/asio/posix/stream_descriptor.hpp                                             |  329 
 BH-1.72.0-1/BH/inst/include/boost/asio/post.hpp                                                                |   34 
 BH-1.72.0-1/BH/inst/include/boost/asio/read.hpp                                                                |  457 
 BH-1.72.0-1/BH/inst/include/boost/asio/read_at.hpp                                                             |   81 
 BH-1.72.0-1/BH/inst/include/boost/asio/read_until.hpp                                                          | 1209 +
 BH-1.72.0-1/BH/inst/include/boost/asio/redirect_error.hpp                                                      |only
 BH-1.72.0-1/BH/inst/include/boost/asio/serial_port.hpp                                                         |  739 
 BH-1.72.0-1/BH/inst/include/boost/asio/serial_port_base.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/signal_set.hpp                                                          |  425 
 BH-1.72.0-1/BH/inst/include/boost/asio/socket_base.hpp                                                         |   52 
 BH-1.72.0-1/BH/inst/include/boost/asio/steady_timer.hpp                                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/strand.hpp                                                              |   29 
 BH-1.72.0-1/BH/inst/include/boost/asio/streambuf.hpp                                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/system_context.hpp                                                      |    5 
 BH-1.72.0-1/BH/inst/include/boost/asio/system_executor.hpp                                                     |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/system_timer.hpp                                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/this_coro.hpp                                                           |only
 BH-1.72.0-1/BH/inst/include/boost/asio/thread_pool.hpp                                                         |    5 
 BH-1.72.0-1/BH/inst/include/boost/asio/time_traits.hpp                                                         |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/use_awaitable.hpp                                                       |only
 BH-1.72.0-1/BH/inst/include/boost/asio/use_future.hpp                                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/uses_executor.hpp                                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/version.hpp                                                             |    4 
 BH-1.72.0-1/BH/inst/include/boost/asio/wait_traits.hpp                                                         |    2 
 BH-1.72.0-1/BH/inst/include/boost/asio/windows/basic_object_handle.hpp                                         |  337 
 BH-1.72.0-1/BH/inst/include/boost/asio/windows/basic_overlapped_handle.hpp                                     |only
 BH-1.72.0-1/BH/inst/include/boost/asio/windows/basic_random_access_handle.hpp                                  |  258 
 BH-1.72.0-1/BH/inst/include/boost/asio/windows/basic_stream_handle.hpp                                         |  261 
 BH-1.72.0-1/BH/inst/include/boost/asio/windows/object_handle.hpp                                               |  349 
 BH-1.72.0-1/BH/inst/include/boost/asio/windows/overlapped_handle.hpp                                           |  300 
 BH-1.72.0-1/BH/inst/include/boost/asio/windows/overlapped_ptr.hpp                                              |   45 
 BH-1.72.0-1/BH/inst/include/boost/asio/windows/random_access_handle.hpp                                        |  347 
 BH-1.72.0-1/BH/inst/include/boost/asio/windows/stream_handle.hpp                                               |  331 
 BH-1.72.0-1/BH/inst/include/boost/asio/write.hpp                                                               |  428 
 BH-1.72.0-1/BH/inst/include/boost/asio/write_at.hpp                                                            |   81 
 BH-1.72.0-1/BH/inst/include/boost/atomic/detail/caps_msvc_x86.hpp                                              |    6 
 BH-1.72.0-1/BH/inst/include/boost/atomic/detail/ops_msvc_common.hpp                                            |    4 
 BH-1.72.0-1/BH/inst/include/boost/atomic/detail/type_traits/is_floating_point.hpp                              |    5 
 BH-1.72.0-1/BH/inst/include/boost/bind/bind.hpp                                                                |   10 
 BH-1.72.0-1/BH/inst/include/boost/bind/mem_fn.hpp                                                              |   22 
 BH-1.72.0-1/BH/inst/include/boost/chrono/detail/inlined/posix/chrono.hpp                                       |   32 
 BH-1.72.0-1/BH/inst/include/boost/chrono/system_clocks.hpp                                                     |    4 
 BH-1.72.0-1/BH/inst/include/boost/circular_buffer.hpp                                                          |   13 
 BH-1.72.0-1/BH/inst/include/boost/circular_buffer/allocators.hpp                                               |   16 
 BH-1.72.0-1/BH/inst/include/boost/circular_buffer/base.hpp                                                     |  174 
 BH-1.72.0-1/BH/inst/include/boost/circular_buffer/space_optimized.hpp                                          |   56 
 BH-1.72.0-1/BH/inst/include/boost/compute/algorithm/copy.hpp                                                   |   71 
 BH-1.72.0-1/BH/inst/include/boost/compute/algorithm/copy_n.hpp                                                 |    6 
 BH-1.72.0-1/BH/inst/include/boost/compute/algorithm/detail/copy_on_device.hpp                                  |   41 
 BH-1.72.0-1/BH/inst/include/boost/compute/algorithm/detail/copy_to_device.hpp                                  |   35 
 BH-1.72.0-1/BH/inst/include/boost/compute/algorithm/detail/copy_to_host.hpp                                    |   33 
 BH-1.72.0-1/BH/inst/include/boost/compute/algorithm/detail/merge_sort_on_gpu.hpp                               |    8 
 BH-1.72.0-1/BH/inst/include/boost/compute/algorithm/detail/radix_sort.hpp                                      |    2 
 BH-1.72.0-1/BH/inst/include/boost/compute/algorithm/detail/scan_on_gpu.hpp                                     |    2 
 BH-1.72.0-1/BH/inst/include/boost/compute/cl.hpp                                                               |   18 
 BH-1.72.0-1/BH/inst/include/boost/compute/cl_ext.hpp                                                           |   18 
 BH-1.72.0-1/BH/inst/include/boost/compute/core.hpp                                                             |    1 
 BH-1.72.0-1/BH/inst/include/boost/compute/detail/cl_versions.hpp                                               |only
 BH-1.72.0-1/BH/inst/include/boost/compute/detail/meta_kernel.hpp                                               |   12 
 BH-1.72.0-1/BH/inst/include/boost/compute/detail/nvidia_compute_capability.hpp                                 |    3 
 BH-1.72.0-1/BH/inst/include/boost/compute/device.hpp                                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/compute/interop/opengl/cl_gl.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/compute/interop/opengl/cl_gl_ext.hpp                                         |   18 
 BH-1.72.0-1/BH/inst/include/boost/compute/kernel.hpp                                                           |    5 
 BH-1.72.0-1/BH/inst/include/boost/compute/program.hpp                                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/compute/types/fundamental.hpp                                                |   87 
 BH-1.72.0-1/BH/inst/include/boost/config/auto_link.hpp                                                         |   19 
 BH-1.72.0-1/BH/inst/include/boost/config/compiler/clang.hpp                                                    |    8 
 BH-1.72.0-1/BH/inst/include/boost/config/compiler/gcc.hpp                                                      |   10 
 BH-1.72.0-1/BH/inst/include/boost/config/compiler/visualc.hpp                                                  |   20 
 BH-1.72.0-1/BH/inst/include/boost/config/detail/suffix.hpp                                                     |   43 
 BH-1.72.0-1/BH/inst/include/boost/config/platform/cygwin.hpp                                                   |    3 
 BH-1.72.0-1/BH/inst/include/boost/config/platform/vxworks.hpp                                                  |  137 
 BH-1.72.0-1/BH/inst/include/boost/config/stdlib/dinkumware.hpp                                                 |    6 
 BH-1.72.0-1/BH/inst/include/boost/config/stdlib/libcomo.hpp                                                    |    1 
 BH-1.72.0-1/BH/inst/include/boost/config/stdlib/libcpp.hpp                                                     |    2 
 BH-1.72.0-1/BH/inst/include/boost/config/stdlib/libstdcpp3.hpp                                                 |   10 
 BH-1.72.0-1/BH/inst/include/boost/config/stdlib/modena.hpp                                                     |    1 
 BH-1.72.0-1/BH/inst/include/boost/config/stdlib/msl.hpp                                                        |    1 
 BH-1.72.0-1/BH/inst/include/boost/config/stdlib/roguewave.hpp                                                  |    1 
 BH-1.72.0-1/BH/inst/include/boost/config/stdlib/sgi.hpp                                                        |    1 
 BH-1.72.0-1/BH/inst/include/boost/config/stdlib/stlport.hpp                                                    |    1 
 BH-1.72.0-1/BH/inst/include/boost/config/stdlib/vacpp.hpp                                                      |    1 
 BH-1.72.0-1/BH/inst/include/boost/config/stdlib/xlcpp_zos.hpp                                                  |    1 
 BH-1.72.0-1/BH/inst/include/boost/config/user.hpp                                                              |    4 
 BH-1.72.0-1/BH/inst/include/boost/container/adaptive_pool.hpp                                                  |    8 
 BH-1.72.0-1/BH/inst/include/boost/container/allocator.hpp                                                      |   18 
 BH-1.72.0-1/BH/inst/include/boost/container/allocator_traits.hpp                                               |   22 
 BH-1.72.0-1/BH/inst/include/boost/container/container_fwd.hpp                                                  |   63 
 BH-1.72.0-1/BH/inst/include/boost/container/deque.hpp                                                          |  456 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/advanced_insert_int.hpp                                     |   14 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/block_list.hpp                                              |    3 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/block_slist.hpp                                             |    3 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/compare_functors.hpp                                        |    4 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/container_or_allocator_rebind.hpp                           |    4 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/container_rebind.hpp                                        |  137 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/copy_move_algo.hpp                                          |    7 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/dispatch_uses_allocator.hpp                                 |   16 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/flat_tree.hpp                                               |   54 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/is_container.hpp                                            |    7 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/iterators.hpp                                               |  250 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/mpl.hpp                                                     |    4 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/pair.hpp                                                    |  101 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/thread_mutex.hpp                                            |   10 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/tree.hpp                                                    |  176 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/version_type.hpp                                            |   15 
 BH-1.72.0-1/BH/inst/include/boost/container/detail/workaround.hpp                                              |    8 
 BH-1.72.0-1/BH/inst/include/boost/container/flat_map.hpp                                                       |   84 
 BH-1.72.0-1/BH/inst/include/boost/container/flat_set.hpp                                                       |   46 
 BH-1.72.0-1/BH/inst/include/boost/container/list.hpp                                                           |  114 
 BH-1.72.0-1/BH/inst/include/boost/container/map.hpp                                                            |  169 
 BH-1.72.0-1/BH/inst/include/boost/container/new_allocator.hpp                                                  |   19 
 BH-1.72.0-1/BH/inst/include/boost/container/options.hpp                                                        |  280 
 BH-1.72.0-1/BH/inst/include/boost/container/pmr/global_resource.hpp                                            |    5 
 BH-1.72.0-1/BH/inst/include/boost/container/pmr/memory_resource.hpp                                            |    3 
 BH-1.72.0-1/BH/inst/include/boost/container/pmr/monotonic_buffer_resource.hpp                                  |    1 
 BH-1.72.0-1/BH/inst/include/boost/container/pmr/resource_adaptor.hpp                                           |   96 
 BH-1.72.0-1/BH/inst/include/boost/container/set.hpp                                                            |  130 
 BH-1.72.0-1/BH/inst/include/boost/container/slist.hpp                                                          |   92 
 BH-1.72.0-1/BH/inst/include/boost/container/small_vector.hpp                                                   |  254 
 BH-1.72.0-1/BH/inst/include/boost/container/stable_vector.hpp                                                  |  275 
 BH-1.72.0-1/BH/inst/include/boost/container/static_vector.hpp                                                  |  260 
 BH-1.72.0-1/BH/inst/include/boost/container/string.hpp                                                         |  137 
 BH-1.72.0-1/BH/inst/include/boost/container/throw_exception.hpp                                                |   20 
 BH-1.72.0-1/BH/inst/include/boost/container/vector.hpp                                                         |  341 
 BH-1.72.0-1/BH/inst/include/boost/core/alloc_construct.hpp                                                     |only
 BH-1.72.0-1/BH/inst/include/boost/core/checked_delete.hpp                                                      |   10 
 BH-1.72.0-1/BH/inst/include/boost/core/default_allocator.hpp                                                   |only
 BH-1.72.0-1/BH/inst/include/boost/core/empty_value.hpp                                                         |    8 
 BH-1.72.0-1/BH/inst/include/boost/core/first_scalar.hpp                                                        |only
 BH-1.72.0-1/BH/inst/include/boost/core/lightweight_test.hpp                                                    |   26 
 BH-1.72.0-1/BH/inst/include/boost/core/lightweight_test_trait.hpp                                              |   77 
 BH-1.72.0-1/BH/inst/include/boost/core/no_exceptions_support.hpp                                               |   14 
 BH-1.72.0-1/BH/inst/include/boost/core/noinit_adaptor.hpp                                                      |only
 BH-1.72.0-1/BH/inst/include/boost/core/nvp.hpp                                                                 |only
 BH-1.72.0-1/BH/inst/include/boost/core/typeinfo.hpp                                                            |    4 
 BH-1.72.0-1/BH/inst/include/boost/core/uncaught_exceptions.hpp                                                 |only
 BH-1.72.0-1/BH/inst/include/boost/core/use_default.hpp                                                         |only
 BH-1.72.0-1/BH/inst/include/boost/cstdint.hpp                                                                  |    6 
 BH-1.72.0-1/BH/inst/include/boost/current_function.hpp                                                         |    6 
 BH-1.72.0-1/BH/inst/include/boost/date_time/constrained_value.hpp                                              |    6 
 BH-1.72.0-1/BH/inst/include/boost/date_time/date_generators.hpp                                                |    4 
 BH-1.72.0-1/BH/inst/include/boost/date_time/dst_rules.hpp                                                      |    6 
 BH-1.72.0-1/BH/inst/include/boost/date_time/dst_transition_generators.hpp                                      |    2 
 BH-1.72.0-1/BH/inst/include/boost/date_time/gregorian/greg_date.hpp                                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/date_time/gregorian_calendar.hpp                                             |    4 
 BH-1.72.0-1/BH/inst/include/boost/date_time/time.hpp                                                           |    4 
 BH-1.72.0-1/BH/inst/include/boost/date_time/time_duration.hpp                                                  |   20 
 BH-1.72.0-1/BH/inst/include/boost/date_time/time_zone_base.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/date_time/time_zone_names.hpp                                                |    2 
 BH-1.72.0-1/BH/inst/include/boost/detail/allocator_utilities.hpp                                               |    4 
 BH-1.72.0-1/BH/inst/include/boost/detail/interlocked.hpp                                                       |  235 
 BH-1.72.0-1/BH/inst/include/boost/detail/sp_typeinfo.hpp                                                       |    3 
 BH-1.72.0-1/BH/inst/include/boost/dynamic_bitset/detail/dynamic_bitset.hpp                                     |  223 
 BH-1.72.0-1/BH/inst/include/boost/dynamic_bitset/dynamic_bitset.hpp                                            |   39 
 BH-1.72.0-1/BH/inst/include/boost/endian/arithmetic.hpp                                                        |  382 
 BH-1.72.0-1/BH/inst/include/boost/endian/buffers.hpp                                                           |  462 
 BH-1.72.0-1/BH/inst/include/boost/endian/conversion.hpp                                                        |  849 
 BH-1.72.0-1/BH/inst/include/boost/endian/detail/endian_load.hpp                                                |only
 BH-1.72.0-1/BH/inst/include/boost/endian/detail/endian_reverse.hpp                                             |only
 BH-1.72.0-1/BH/inst/include/boost/endian/detail/endian_store.hpp                                               |only
 BH-1.72.0-1/BH/inst/include/boost/endian/detail/integral_by_size.hpp                                           |only
 BH-1.72.0-1/BH/inst/include/boost/endian/detail/intrinsic.hpp                                                  |    4 
 BH-1.72.0-1/BH/inst/include/boost/endian/detail/is_trivially_copyable.hpp                                      |only
 BH-1.72.0-1/BH/inst/include/boost/endian/detail/order.hpp                                                      |only
 BH-1.72.0-1/BH/inst/include/boost/exception/detail/error_info_impl.hpp                                         |    6 
 BH-1.72.0-1/BH/inst/include/boost/exception/detail/exception_ptr.hpp                                           |    8 
 BH-1.72.0-1/BH/inst/include/boost/exception/diagnostic_information.hpp                                         |    8 
 BH-1.72.0-1/BH/inst/include/boost/exception/exception.hpp                                                      |   17 
 BH-1.72.0-1/BH/inst/include/boost/exception/info.hpp                                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/filesystem.hpp                                                               |    7 
 BH-1.72.0-1/BH/inst/include/boost/filesystem/config.hpp                                                        |   12 
 BH-1.72.0-1/BH/inst/include/boost/filesystem/convenience.hpp                                                   |    4 
 BH-1.72.0-1/BH/inst/include/boost/filesystem/directory.hpp                                                     |only
 BH-1.72.0-1/BH/inst/include/boost/filesystem/exception.hpp                                                     |  101 
 BH-1.72.0-1/BH/inst/include/boost/filesystem/file_status.hpp                                                   |only
 BH-1.72.0-1/BH/inst/include/boost/filesystem/fstream.hpp                                                       |   16 
 BH-1.72.0-1/BH/inst/include/boost/filesystem/operations.hpp                                                    | 1685 -
 BH-1.72.0-1/BH/inst/include/boost/filesystem/path.hpp                                                          |  264 
 BH-1.72.0-1/BH/inst/include/boost/filesystem/path_traits.hpp                                                   |   20 
 BH-1.72.0-1/BH/inst/include/boost/filesystem/string_file.hpp                                                   |    6 
 BH-1.72.0-1/BH/inst/include/boost/flyweight/detail/default_value_policy.hpp                                    |    9 
 BH-1.72.0-1/BH/inst/include/boost/foreach.hpp                                                                  |   19 
 BH-1.72.0-1/BH/inst/include/boost/function/function_base.hpp                                                   |   18 
 BH-1.72.0-1/BH/inst/include/boost/functional/factory.hpp                                                       |  543 
 BH-1.72.0-1/BH/inst/include/boost/functional/value_factory.hpp                                                 |  167 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/area.hpp                                                 |    9 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/buffer.hpp                                               |   55 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/densify.hpp                                              |    7 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/buffer/buffer_box.hpp                             |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/buffer/buffer_inserter.hpp                        |   37 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/buffer/buffer_policies.hpp                        |   15 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/buffer/buffered_piece_collection.hpp              |  228 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/buffer/get_piece_turns.hpp                        |  149 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/buffer/line_line_intersection.hpp                 |   69 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/buffer/turn_in_original_visitor.hpp               |   33 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/buffer/turn_in_piece_visitor.hpp                  |  567 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/calculate_point_order.hpp                         |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/closest_feature/point_to_range.hpp                |    7 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/closest_feature/range_to_range.hpp                |   17 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/comparable_distance/interface.hpp                 |   19 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/covered_by/implementation.hpp                     |    6 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/covered_by/interface.hpp                          |   12 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/direction_code.hpp                                |  119 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/disjoint/areal_areal.hpp                          |  103 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/disjoint/box_box.hpp                              |  136 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/disjoint/linear_areal.hpp                         |    7 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/disjoint/linear_linear.hpp                        |   48 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/disjoint/linear_segment_or_box.hpp                |   61 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/disjoint/multipoint_geometry.hpp                  |   98 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/disjoint/point_box.hpp                            |   15 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/disjoint/point_point.hpp                          |  202 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/disjoint/segment_box.hpp                          |   98 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/distance/geometry_to_segment_or_box.hpp           |   26 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/distance/interface.hpp                            |   13 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/distance/linear_or_areal_to_areal.hpp             |    9 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/distance/multipoint_to_geometry.hpp               |   20 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/distance/point_to_geometry.hpp                    |   24 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/distance/segment_to_box.hpp                       |   77 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/distance/segment_to_segment.hpp                   |    5 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/envelope/areal.hpp                                |   70 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/envelope/box.hpp                                  |  148 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/envelope/interface.hpp                            |   31 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/envelope/linear.hpp                               |   77 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/envelope/multipoint.hpp                           |  353 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/envelope/point.hpp                                |   90 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/envelope/range.hpp                                |  112 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/envelope/range_of_boxes.hpp                       |   29 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/envelope/segment.hpp                              |  410 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/equals/collect_vectors.hpp                        |   23 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/equals/implementation.hpp                         |  114 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/equals/interface.hpp                              |   12 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/equals/point_point.hpp                            |   16 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/expand/box.hpp                                    |   99 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/expand/indexed.hpp                                |   24 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/expand/interface.hpp                              |   27 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/expand/point.hpp                                  |  261 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/expand/segment.hpp                                |  112 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/expand_by_epsilon.hpp                             |   88 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/extreme_points.hpp                                |    5 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/get_left_turns.hpp                                |   25 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/get_max_size.hpp                                  |    7 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/has_self_intersections.hpp                        |    6 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/intersection/interface.hpp                        |   49 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/intersects/implementation.hpp                     |   11 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_simple/areal.hpp                               |   55 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_simple/linear.hpp                              |   72 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_simple/multipoint.hpp                          |   15 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_valid/complement_graph.hpp                     |   14 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_valid/debug_complement_graph.hpp               |   13 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_valid/debug_validity_phase.hpp                 |    6 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_valid/has_duplicates.hpp                       |   11 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_valid/has_invalid_coordinate.hpp               |   10 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_valid/has_spikes.hpp                           |   82 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_valid/has_valid_self_turns.hpp                 |   29 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_valid/linear.hpp                               |    8 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_valid/multipolygon.hpp                         |   31 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_valid/polygon.hpp                              |   83 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_valid/ring.hpp                                 |   33 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/is_valid/segment.hpp                              |    9 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/make                                              |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/normalize.hpp                                     |  285 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/append_no_duplicates.hpp                  |   29 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/append_no_dups_or_spikes.hpp              |   33 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/assign_parents.hpp                        |   28 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/check_enrich.hpp                          |   16 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/clip_linestring.hpp                       |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/convert_ring.hpp                          |   15 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/copy_segments.hpp                         |   26 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/enrich_intersection_points.hpp            |   44 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/follow.hpp                                |   31 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/get_distance_measure.hpp                  |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/get_intersection_points.hpp               |   57 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/get_ring.hpp                              |   15 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/get_turn_info.hpp                         |  494 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/get_turn_info_for_endpoint.hpp            |  205 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/get_turn_info_helpers.hpp                 |  580 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/get_turn_info_la.hpp                      |  316 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/get_turn_info_ll.hpp                      |  166 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/get_turns.hpp                             |  343 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/handle_colocations.hpp                    |   37 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/handle_self_turns.hpp                     |  124 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/intersection_insert.hpp                   |  111 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/linear_linear.hpp                         |   30 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/overlay.hpp                               |   41 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/pointlike_linear.hpp                      |   17 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/pointlike_pointlike.hpp                   |   18 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/segment_as_subrange.hpp                   |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/select_rings.hpp                          |    1 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/self_turn_points.hpp                      |   26 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/sort_by_side.hpp                          |  112 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/stream_info.hpp                           |   19 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/traversal.hpp                             |  333 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/traversal_ring_creator.hpp                |   51 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/traversal_switch_detector.hpp             |    6 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/overlay/turn_info.hpp                             |    4 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/partition.hpp                                     |   32 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/point_is_spike_or_equal.hpp                       |   36 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/point_on_border.hpp                               |  160 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/relate/areal_areal.hpp                            |   45 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/relate/boundary_checker.hpp                       |   47 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/relate/de9im.hpp                                  |   29 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/relate/follow_helpers.hpp                         |   23 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/relate/linear_areal.hpp                           |  116 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/relate/linear_linear.hpp                          |   61 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/relate/multi_point_geometry.hpp                   |  129 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/relate/point_geometry.hpp                         |   10 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/relate/point_point.hpp                            |   37 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/relate/relate_impl.hpp                            |   70 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/relate/result.hpp                                 |    9 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/relate/topology_check.hpp                         |   61 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/relate/turns.hpp                                  |   86 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/sections/section_box_policies.hpp                 |   12 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/sections/section_functions.hpp                    |   10 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/sections/sectionalize.hpp                         |  176 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/sub_range.hpp                                     |   16 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/touches/implementation.hpp                        |   46 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/within/implementation.hpp                         |    6 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/within/interface.hpp                              |   12 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/within/multi_point.hpp                            |   43 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/detail/within/point_in_geometry.hpp                      |   57 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/difference.hpp                                           |   42 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/discrete_frechet_distance.hpp                            |   69 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/discrete_hausdorff_distance.hpp                          |   35 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/dispatch/disjoint.hpp                                    |    5 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/dispatch/distance.hpp                                    |    8 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/dispatch/envelope.hpp                                    |    8 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/dispatch/expand.hpp                                      |    8 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/for_each.hpp                                             |    5 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/is_convex.hpp                                            |   14 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/line_interpolate.hpp                                     |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/remove_spikes.hpp                                        |   47 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/simplify.hpp                                             |   23 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/sym_difference.hpp                                       |   42 
 BH-1.72.0-1/BH/inst/include/boost/geometry/algorithms/union.hpp                                                |   57 
 BH-1.72.0-1/BH/inst/include/boost/geometry/arithmetic/infinite_line_functions.hpp                              |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/core/config.hpp                                                     |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/core/cs.hpp                                                         |  155 
 BH-1.72.0-1/BH/inst/include/boost/geometry/core/tags.hpp                                                       |    7 
 BH-1.72.0-1/BH/inst/include/boost/geometry/formulas/area_formulas.hpp                                          |    1 
 BH-1.72.0-1/BH/inst/include/boost/geometry/formulas/differential_quantities.hpp                                |   10 
 BH-1.72.0-1/BH/inst/include/boost/geometry/formulas/eccentricity_sqr.hpp                                       |    6 
 BH-1.72.0-1/BH/inst/include/boost/geometry/formulas/interpolate_point_spherical.hpp                            |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/formulas/karney_direct.hpp                                          |   29 
 BH-1.72.0-1/BH/inst/include/boost/geometry/formulas/karney_inverse.hpp                                         |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/formulas/meridian_direct.hpp                                        |   10 
 BH-1.72.0-1/BH/inst/include/boost/geometry/formulas/meridian_segment.hpp                                       |    4 
 BH-1.72.0-1/BH/inst/include/boost/geometry/formulas/quarter_meridian.hpp                                       |    7 
 BH-1.72.0-1/BH/inst/include/boost/geometry/formulas/sjoberg_intersection.hpp                                   |   25 
 BH-1.72.0-1/BH/inst/include/boost/geometry/formulas/spherical.hpp                                              |    6 
 BH-1.72.0-1/BH/inst/include/boost/geometry/formulas/thomas_direct.hpp                                          |   10 
 BH-1.72.0-1/BH/inst/include/boost/geometry/formulas/vincenty_direct.hpp                                        |    7 
 BH-1.72.0-1/BH/inst/include/boost/geometry/geometries/adapted/boost_polygon/ring_proxy.hpp                     |   11 
 BH-1.72.0-1/BH/inst/include/boost/geometry/geometries/adapted/boost_tuple.hpp                                  |    6 
 BH-1.72.0-1/BH/inst/include/boost/geometry/geometries/adapted/std_array.hpp                                    |   15 
 BH-1.72.0-1/BH/inst/include/boost/geometry/geometries/concepts/multi_point_concept.hpp                         |    1 
 BH-1.72.0-1/BH/inst/include/boost/geometry/geometries/helper_geometry.hpp                                      |   59 
 BH-1.72.0-1/BH/inst/include/boost/geometry/geometries/infinite_line.hpp                                        |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/geometries/variant.hpp                                              |    9 
 BH-1.72.0-1/BH/inst/include/boost/geometry/geometry.hpp                                                        |    1 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/algorithms/bounds.hpp                                  |  184 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/algorithms/intersection_content.hpp                    |   39 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/bounded_view.hpp                                       |  146 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/distance_predicates.hpp                                |  187 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/meta.hpp                                               |   67 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/predicates.hpp                                         |  200 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/linear/redistribute_elements.hpp                 |   43 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/node/node.hpp                                    |   20 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/options.hpp                                      |   19 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/pack_create.hpp                                  |   31 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/quadratic/redistribute_elements.hpp              |   41 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/query_iterators.hpp                              |   18 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/rstar/choose_next_node.hpp                       |   84 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/rstar/insert.hpp                                 |   57 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/rstar/redistribute_elements.hpp                  |   86 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/utilities/are_boxes_ok.hpp                       |   23 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/visitors/children_box.hpp                        |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/visitors/count.hpp                               |   39 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/visitors/distance_query.hpp                      |   58 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/visitors/insert.hpp                              |   20 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/visitors/remove.hpp                              |   20 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/rtree/visitors/spatial_query.hpp                       |   54 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/detail/translator.hpp                                         |   41 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/equal_to.hpp                                                  |  119 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/indexable.hpp                                                 |  207 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/parameters.hpp                                                |   76 
 BH-1.72.0-1/BH/inst/include/boost/geometry/index/rtree.hpp                                                     |   95 
 BH-1.72.0-1/BH/inst/include/boost/geometry/io/wkt/read.hpp                                                     |   19 
 BH-1.72.0-1/BH/inst/include/boost/geometry/io/wkt/write.hpp                                                    |   22 
 BH-1.72.0-1/BH/inst/include/boost/geometry/iterators/detail/point_iterator/iterator_type.hpp                   |    4 
 BH-1.72.0-1/BH/inst/include/boost/geometry/policies/compare.hpp                                                |  148 
 BH-1.72.0-1/BH/inst/include/boost/geometry/policies/robustness/get_rescale_policy.hpp                          |  264 
 BH-1.72.0-1/BH/inst/include/boost/geometry/policies/robustness/no_rescale_policy.hpp                           |   13 
 BH-1.72.0-1/BH/inst/include/boost/geometry/policies/robustness/rescale_policy.hpp                              |   13 
 BH-1.72.0-1/BH/inst/include/boost/geometry/policies/robustness/rescale_policy_tags.hpp                         |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/policies/robustness/segment_ratio.hpp                               |   14 
 BH-1.72.0-1/BH/inst/include/boost/geometry/policies/robustness/segment_ratio_type.hpp                          |   31 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projection.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/dpar.hpp                                            |    7 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/factory.hpp                                         |   59 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/grids.hpp                                           |   71 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/aasincos.hpp                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/base_dynamic.hpp                               |  107 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/base_static.hpp                                |  109 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/dms_parser.hpp                                 |    4 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/factory_entry.hpp                              |   23 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/pj_apply_gridshift.hpp                         |  126 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/pj_datum_set.hpp                               |   10 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/pj_datums.hpp                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/pj_ellps.hpp                                   |    4 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/pj_fwd.hpp                                     |    7 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/pj_gauss.hpp                                   |    3 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/pj_gridinfo.hpp                                |   15 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/pj_gridlist.hpp                                |   84 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/pj_inv.hpp                                     |    8 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/pj_mlfn.hpp                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/pj_phi2.hpp                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/pj_transform.hpp                               |    1 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/proj_mdist.hpp                                 |    4 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/impl/projects.hpp                                   |   38 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/par_data.hpp                                        |   12 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/aea.hpp                                        |   30 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/aeqd.hpp                                       |  199 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/airy.hpp                                       |   28 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/aitoff.hpp                                     |   35 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/august.hpp                                     |   19 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/bacon.hpp                                      |   47 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/bipc.hpp                                       |   33 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/boggs.hpp                                      |   19 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/bonne.hpp                                      |   50 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/cass.hpp                                       |   46 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/cc.hpp                                         |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/cea.hpp                                        |   61 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/chamb.hpp                                      |   27 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/collg.hpp                                      |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/crast.hpp                                      |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/denoy.hpp                                      |   19 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/eck1.hpp                                       |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/eck2.hpp                                       |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/eck3.hpp                                       |   42 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/eck4.hpp                                       |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/eck5.hpp                                       |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/eqc.hpp                                        |   28 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/eqdc.hpp                                       |   31 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/etmerc.hpp                                     |   35 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/fahey.hpp                                      |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/fouc_s.hpp                                     |   30 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/gall.hpp                                       |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/geocent.hpp                                    |   23 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/geos.hpp                                       |   32 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/gins8.hpp                                      |   19 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/gn_sinu.hpp                                    |  110 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/gnom.hpp                                       |   23 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/goode.hpp                                      |   61 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/gstmerc.hpp                                    |   33 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/hammer.hpp                                     |   24 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/hatano.hpp                                     |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/healpix.hpp                                    |   89 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/igh.hpp                                        |  167 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/imw_p.hpp                                      |   30 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/isea.hpp                                       |   37 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/krovak.hpp                                     |   32 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/labrd.hpp                                      |   44 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/laea.hpp                                       |   48 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/lagrng.hpp                                     |   26 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/larr.hpp                                       |   19 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/lask.hpp                                       |   19 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/latlong.hpp                                    |   35 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/lcc.hpp                                        |   56 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/lcca.hpp                                       |   31 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/loxim.hpp                                      |   28 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/lsat.hpp                                       |   42 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/mbt_fps.hpp                                    |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/mbtfpp.hpp                                     |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/mbtfpq.hpp                                     |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/merc.hpp                                       |   59 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/mill.hpp                                       |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/mod_ster.hpp                                   |   67 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/moll.hpp                                       |   35 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/natearth.hpp                                   |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/nell.hpp                                       |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/nell_h.hpp                                     |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/nocol.hpp                                      |   19 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/nsper.hpp                                      |   45 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/nzmg.hpp                                       |   25 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/ob_tran.hpp                                    |   94 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/ocea.hpp                                       |   24 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/oea.hpp                                        |   26 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/omerc.hpp                                      |   36 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/ortho.hpp                                      |   25 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/poly.hpp                                       |   48 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/putp2.hpp                                      |   22 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/putp3.hpp                                      |   28 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/putp4p.hpp                                     |   28 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/putp5.hpp                                      |   28 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/putp6.hpp                                      |   28 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/qsc.hpp                                        |   29 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/robin.hpp                                      |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/rouss.hpp                                      |   31 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/rpoly.hpp                                      |   34 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/sconics.hpp                                    |   66 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/somerc.hpp                                     |   27 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/stere.hpp                                      |   69 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/sterea.hpp                                     |   27 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/sts.hpp                                        |   42 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/tcc.hpp                                        |   19 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/tcea.hpp                                       |   29 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/tmerc.hpp                                      |   52 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/tpeqd.hpp                                      |   26 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/urm5.hpp                                       |   24 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/urmfps.hpp                                     |   33 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/vandg.hpp                                      |   21 
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 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/vandg4.hpp                                     |   19 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/wag2.hpp                                       |   21 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/wag3.hpp                                       |   24 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/wag7.hpp                                       |   19 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/wink1.hpp                                      |   24 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/projections/proj/wink2.hpp                                      |   22 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/shared_grids.hpp                                                |   23 
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/shared_grids_boost.hpp                                          |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/srs/shared_grids_std.hpp                                            |only
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 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/agnostic/point_in_point.hpp                              |   73 
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 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/agnostic/point_in_poly_winding.hpp                       |    8 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/cartesian/area.hpp                                       |    5 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/cartesian/azimuth.hpp                                    |    4 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/cartesian/box_in_box.hpp                                 |  196 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/cartesian/buffer_end_flat.hpp                            |   12 
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 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/cartesian/point_order.hpp                                |only
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 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/cartesian/side_of_intersection.hpp                       |    6 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/concepts/area_concept.hpp                                |    7 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/concepts/distance_concept.hpp                            |    6 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/concepts/within_concept.hpp                              |   72 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/convex_hull.hpp                                          |    6 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/disjoint.hpp                                             |    9 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/envelope.hpp                                             |    7 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/expand.hpp                                               |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/area.hpp                                      |    1 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/buffer_point_circle.hpp                       |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/disjoint_segment_box.hpp                      |   35 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/distance_cross_track.hpp                      |  600 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/distance_cross_track_box_box.hpp              |   10 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/distance_cross_track_point_box.hpp            |    8 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/distance_karney.hpp                           |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/distance_segment_box.hpp                      |   59 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/envelope.hpp                                  |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/envelope_segment.hpp                          |   41 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/expand_segment.hpp                            |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/index.hpp                                     |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/intersection.hpp                              |  145 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/io.hpp                                        |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/line_interpolate.hpp                          |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/parameters.hpp                                |   52 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/point_in_poly_winding.hpp                     |   15 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/point_order.hpp                               |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/geographic/side.hpp                                      |   22 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/index.hpp                                                |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/intersection_result.hpp                                  |   11 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/intersection_strategies.hpp                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/io.hpp                                                   |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/line_interpolate.hpp                                     |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/normalize.hpp                                            |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/point_order.hpp                                          |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/side.hpp                                                 |    7 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/compare.hpp                                    |   23 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/densify.hpp                                    |   69 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/disjoint_box_box.hpp                           |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/disjoint_segment_box.hpp                       |   34 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/distance_cross_track.hpp                       |   53 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/distance_segment_box.hpp                       |   89 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/envelope.hpp                                   |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/envelope_box.hpp                               |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/envelope_multipoint.hpp                        |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/envelope_point.hpp                             |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/envelope_segment.hpp                           |  409 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/expand_box.hpp                                 |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/expand_point.hpp                               |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/expand_segment.hpp                             |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/index.hpp                                      |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/intersection.hpp                               |  159 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/io.hpp                                         |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/line_interpolate.hpp                           |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/point_in_point.hpp                             |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/point_in_poly_winding.hpp                      |  196 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/point_order.hpp                                |only
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/spherical/ssf.hpp                                        |   17 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/strategies.hpp                                           |   27 
 BH-1.72.0-1/BH/inst/include/boost/geometry/strategies/transform/matrix_transformers.hpp                        |  243 
 BH-1.72.0-1/BH/inst/include/boost/geometry/util/calculation_type.hpp                                           |    6 
 BH-1.72.0-1/BH/inst/include/boost/geometry/util/combine_if.hpp                                                 |   11 
 BH-1.72.0-1/BH/inst/include/boost/geometry/util/is_inverse_spheroidal_coordinates.hpp                          |    5 
 BH-1.72.0-1/BH/inst/include/boost/geometry/util/math.hpp                                                       |   52 
 BH-1.72.0-1/BH/inst/include/boost/geometry/util/normalize_spheroidal_coordinates.hpp                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/geometry/util/range.hpp                                                      |    8 
 BH-1.72.0-1/BH/inst/include/boost/geometry/util/series_expansion.hpp                                           |   18 
 BH-1.72.0-1/BH/inst/include/boost/geometry/views/detail/boundary_view/implementation.hpp                       |    5 
 BH-1.72.0-1/BH/inst/include/boost/get_pointer.hpp                                                              |    6 
 BH-1.72.0-1/BH/inst/include/boost/graph/adjacency_matrix.hpp                                                   |    6 
 BH-1.72.0-1/BH/inst/include/boost/graph/astar_search.hpp                                                       |  343 
 BH-1.72.0-1/BH/inst/include/boost/graph/bipartite.hpp                                                          |    6 
 BH-1.72.0-1/BH/inst/include/boost/graph/boyer_myrvold_planar_test.hpp                                          |  178 
 BH-1.72.0-1/BH/inst/include/boost/graph/breadth_first_search.hpp                                               |    9 
 BH-1.72.0-1/BH/inst/include/boost/graph/bron_kerbosch_all_cliques.hpp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/graph/connected_components.hpp                                               |    5 
 BH-1.72.0-1/BH/inst/include/boost/graph/copy.hpp                                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/graph/cycle_canceling.hpp                                                    |   44 
 BH-1.72.0-1/BH/inst/include/boost/graph/depth_first_search.hpp                                                 |    7 
 BH-1.72.0-1/BH/inst/include/boost/graph/detail/adjacency_list.hpp                                              |   13 
 BH-1.72.0-1/BH/inst/include/boost/graph/detail/array_binary_tree.hpp                                           |    8 
 BH-1.72.0-1/BH/inst/include/boost/graph/detail/empty_header.hpp                                                |only
 BH-1.72.0-1/BH/inst/include/boost/graph/detail/geodesic.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/graph/detail/mpi_include.hpp                                                 |only
 BH-1.72.0-1/BH/inst/include/boost/graph/detail/read_graphviz_new.hpp                                           |    6 
 BH-1.72.0-1/BH/inst/include/boost/graph/detail/read_graphviz_spirit.hpp                                        |    6 
 BH-1.72.0-1/BH/inst/include/boost/graph/dijkstra_shortest_paths.hpp                                            |   46 
 BH-1.72.0-1/BH/inst/include/boost/graph/dijkstra_shortest_paths_no_color_map.hpp                               |   59 
 BH-1.72.0-1/BH/inst/include/boost/graph/dimacs.hpp                                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/graph/distributed/detail/mpi_process_group.ipp                               |   14 
 BH-1.72.0-1/BH/inst/include/boost/graph/exception.hpp                                                          |   12 
 BH-1.72.0-1/BH/inst/include/boost/graph/exterior_property.hpp                                                  |    5 
 BH-1.72.0-1/BH/inst/include/boost/graph/fruchterman_reingold.hpp                                               |    5 
 BH-1.72.0-1/BH/inst/include/boost/graph/graphml.hpp                                                            |    8 
 BH-1.72.0-1/BH/inst/include/boost/graph/graphviz.hpp                                                           |   15 
 BH-1.72.0-1/BH/inst/include/boost/graph/gursoy_atun_layout.hpp                                                 |    4 
 BH-1.72.0-1/BH/inst/include/boost/graph/isomorphism.hpp                                                        |    1 
 BH-1.72.0-1/BH/inst/include/boost/graph/loop_erased_random_walk.hpp                                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/graph/matrix_as_graph.hpp                                                    |   14 
 BH-1.72.0-1/BH/inst/include/boost/graph/max_cardinality_matching.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/graph/maximum_adjacency_search.hpp                                           |   48 
 BH-1.72.0-1/BH/inst/include/boost/graph/maximum_weighted_matching.hpp                                          |only
 BH-1.72.0-1/BH/inst/include/boost/graph/metis.hpp                                                              |    4 
 BH-1.72.0-1/BH/inst/include/boost/graph/minimum_degree_ordering.hpp                                            |   13 
 BH-1.72.0-1/BH/inst/include/boost/graph/named_function_params.hpp                                              |   79 
 BH-1.72.0-1/BH/inst/include/boost/graph/one_bit_color_map.hpp                                                  |    7 
 BH-1.72.0-1/BH/inst/include/boost/graph/page_rank.hpp                                                          |    5 
 BH-1.72.0-1/BH/inst/include/boost/graph/parallel/distribution.hpp                                              |   10 
 BH-1.72.0-1/BH/inst/include/boost/graph/planar_detail/boyer_myrvold_impl.hpp                                   |    3 
 BH-1.72.0-1/BH/inst/include/boost/graph/profile.hpp                                                            |    3 
 BH-1.72.0-1/BH/inst/include/boost/graph/r_c_shortest_paths.hpp                                                 |  656 
 BH-1.72.0-1/BH/inst/include/boost/graph/random_spanning_tree.hpp                                               |   26 
 BH-1.72.0-1/BH/inst/include/boost/graph/relax.hpp                                                              |   31 
 BH-1.72.0-1/BH/inst/include/boost/graph/rmat_graph_generator.hpp                                               |    5 
 BH-1.72.0-1/BH/inst/include/boost/graph/sloan_ordering.hpp                                                     |    3 
 BH-1.72.0-1/BH/inst/include/boost/graph/stanford_graph.hpp                                                     |    1 
 BH-1.72.0-1/BH/inst/include/boost/graph/stoer_wagner_min_cut.hpp                                               |    3 
 BH-1.72.0-1/BH/inst/include/boost/graph/strong_components.hpp                                                  |    5 
 BH-1.72.0-1/BH/inst/include/boost/graph/subgraph.hpp                                                           |  118 
 BH-1.72.0-1/BH/inst/include/boost/graph/successive_shortest_path_nonnegative_weights.hpp                       |   76 
 BH-1.72.0-1/BH/inst/include/boost/graph/two_bit_color_map.hpp                                                  |    7 
 BH-1.72.0-1/BH/inst/include/boost/graph/vector_as_graph.hpp                                                    |    9 
 BH-1.72.0-1/BH/inst/include/boost/graph/wavefront.hpp                                                          |    3 
 BH-1.72.0-1/BH/inst/include/boost/heap/detail/stable_heap.hpp                                                  |   10 
 BH-1.72.0-1/BH/inst/include/boost/heap/policies.hpp                                                            |    6 
 BH-1.72.0-1/BH/inst/include/boost/integer/common_factor_rt.hpp                                                 |   56 
 BH-1.72.0-1/BH/inst/include/boost/integer/extended_euclidean.hpp                                               |only
 BH-1.72.0-1/BH/inst/include/boost/integer/mod_inverse.hpp                                                      |only
 BH-1.72.0-1/BH/inst/include/boost/interprocess/detail/os_file_functions.hpp                                    |    4 
 BH-1.72.0-1/BH/inst/include/boost/interprocess/detail/win32_api.hpp                                            |   16 
 BH-1.72.0-1/BH/inst/include/boost/interprocess/streams/bufferstream.hpp                                        |    4 
 BH-1.72.0-1/BH/inst/include/boost/interprocess/sync/spin/mutex.hpp                                             |   18 
 BH-1.72.0-1/BH/inst/include/boost/interprocess/sync/windows/winapi_wrapper_common.hpp                          |   51 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/avl_set.hpp                                                        |   44 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/avltree.hpp                                                        |   22 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/bs_set.hpp                                                         |   44 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/bstree.hpp                                                         |   22 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/bstree_algorithms.hpp                                              |    4 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/detail/ebo_functor_holder.hpp                                      |    6 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/detail/generic_hook.hpp                                            |   18 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/detail/hashtable_node.hpp                                          |   27 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/detail/hook_traits.hpp                                             |   16 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/detail/iterator.hpp                                                |   20 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/detail/key_nodeptr_comp.hpp                                        |    2 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/detail/list_iterator.hpp                                           |   18 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/detail/math.hpp                                                    |    4 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/detail/mpl.hpp                                                     |    1 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/detail/slist_iterator.hpp                                          |   14 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/detail/tree_iterator.hpp                                           |   34 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/detail/workaround.hpp                                              |    7 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/hashtable.hpp                                                      |   30 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/intrusive_fwd.hpp                                                  |    3 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/list.hpp                                                           |   18 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/options.hpp                                                        |   10 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/pack_options.hpp                                                   |    6 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/pointer_traits.hpp                                                 |   28 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/priority_compare.hpp                                               |    4 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/rbtree.hpp                                                         |   22 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/rbtree_algorithms.hpp                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/set.hpp                                                            |   44 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/sg_set.hpp                                                         |   44 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/sgtree.hpp                                                         |   22 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/slist.hpp                                                          |   22 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/splay_set.hpp                                                      |   44 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/splaytree.hpp                                                      |   22 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/treap.hpp                                                          |  159 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/treap_algorithms.hpp                                               |   31 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/treap_set.hpp                                                      |  127 
 BH-1.72.0-1/BH/inst/include/boost/intrusive/unordered_set_hook.hpp                                             |   18 
 BH-1.72.0-1/BH/inst/include/boost/iostreams/detail/adapter/concept_adapter.hpp                                 |    4 
 BH-1.72.0-1/BH/inst/include/boost/iostreams/detail/config/fpos.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/iostreams/detail/functional.hpp                                              |   16 
 BH-1.72.0-1/BH/inst/include/boost/iostreams/filter/bzip2.hpp                                                   |   34 
 BH-1.72.0-1/BH/inst/include/boost/iostreams/filter/lzma.hpp                                                    |   14 
 BH-1.72.0-1/BH/inst/include/boost/iterator/detail/facade_iterator_category.hpp                                 |    5 
 BH-1.72.0-1/BH/inst/include/boost/iterator/iterator_adaptor.hpp                                                |    6 
 BH-1.72.0-1/BH/inst/include/boost/iterator/iterator_facade.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/lexical_cast.hpp                                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/lexical_cast/bad_lexical_cast.hpp                                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/lexical_cast/detail/converter_lexical.hpp                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/lexical_cast/detail/converter_lexical_streams.hpp                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/lexical_cast/detail/converter_numeric.hpp                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/lexical_cast/detail/inf_nan.hpp                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/lexical_cast/detail/is_character.hpp                                         |    2 
 BH-1.72.0-1/BH/inst/include/boost/lexical_cast/detail/lcast_char_constants.hpp                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/lexical_cast/detail/lcast_unsigned_converters.hpp                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/lexical_cast/detail/widest_char.hpp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/lexical_cast/try_lexical_convert.hpp                                         |   11 
 BH-1.72.0-1/BH/inst/include/boost/math/constants/calculate_constants.hpp                                       |   33 
 BH-1.72.0-1/BH/inst/include/boost/math/constants/constants.hpp                                                 |   13 
 BH-1.72.0-1/BH/inst/include/boost/math/cstdfloat/cstdfloat_cmath.hpp                                           | 1528 -
 BH-1.72.0-1/BH/inst/include/boost/math/cstdfloat/cstdfloat_limits.hpp                                          |   19 
 BH-1.72.0-1/BH/inst/include/boost/math/cstdfloat/cstdfloat_types.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/math/differentiation                                                         |only
 BH-1.72.0-1/BH/inst/include/boost/math/distributions/empirical_cumulative_distribution_function.hpp            |only
 BH-1.72.0-1/BH/inst/include/boost/math/distributions/skew_normal.hpp                                           |    4 
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/barycentric_rational.hpp                                  |   23 
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/cardinal_cubic_b_spline.hpp                               |only
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/cardinal_quadratic_b_spline.hpp                           |only
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/cardinal_quintic_b_spline.hpp                             |only
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/cardinal_trigonometric.hpp                                |only
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/catmull_rom.hpp                                           |only
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/cubic_b_spline.hpp                                        |   12 
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/detail/barycentric_rational_detail.hpp                    |   51 
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/detail/cardinal_cubic_b_spline_detail.hpp                 |only
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/detail/cardinal_quadratic_b_spline_detail.hpp             |only
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 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/detail/cardinal_trigonometric_detail.hpp                  |only
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/detail/cubic_b_spline_detail.hpp                          |   43 
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/detail/vector_barycentric_rational_detail.hpp             |only
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/detail/whittaker_shannon_detail.hpp                       |only
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/vector_barycentric_rational.hpp                           |only
 BH-1.72.0-1/BH/inst/include/boost/math/interpolators/whittaker_shannon.hpp                                     |only
 BH-1.72.0-1/BH/inst/include/boost/math/quadrature/detail/ooura_fourier_integrals_detail.hpp                    |only
 BH-1.72.0-1/BH/inst/include/boost/math/quadrature/ooura_fourier_integrals.hpp                                  |only
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions.hpp                                                   |    9 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/bessel_iterators.hpp                                  |only
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/beta.hpp                                              |  387 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/cardinal_b_spline.hpp                                 |only
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/cos_pi.hpp                                            |    7 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/bernoulli_details.hpp                          |   13 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/bessel_i0.hpp                                  |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/bessel_i1.hpp                                  |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/bessel_j0.hpp                                  |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/bessel_j1.hpp                                  |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/bessel_jy.hpp                                  |    4 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/bessel_k0.hpp                                  |   26 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/bessel_k1.hpp                                  |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/bessel_y0.hpp                                  |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/bessel_y1.hpp                                  |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/hypergeometric_0F1_bessel.hpp                  |only
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/hypergeometric_1F1_addition_theorems_on_z.hpp  |only
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 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/igamma_large.hpp                               |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/lanczos_sse2.hpp                               |   18 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/lgamma_small.hpp                               |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/detail/unchecked_factorial.hpp                        |   52 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/digamma.hpp                                           |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/ellint_1.hpp                                          |   14 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/ellint_2.hpp                                          |   13 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/ellint_3.hpp                                          |   19 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/ellint_d.hpp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/erf.hpp                                               |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/expint.hpp                                            |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/expm1.hpp                                             |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/gamma.hpp                                             |  380 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/gegenbauer.hpp                                        |only
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 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/jacobi.hpp                                            |only
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/lambert_w.hpp                                         |   50 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/lanczos.hpp                                           | 1983 +
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/log1p.hpp                                             |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/math_fwd.hpp                                          |   34 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/next.hpp                                              |    6 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/owens_t.hpp                                           |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/prime.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/round.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/sin_pi.hpp                                            |   13 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/trigamma.hpp                                          |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/trunc.hpp                                             |   51 
 BH-1.72.0-1/BH/inst/include/boost/math/special_functions/zeta.hpp                                              |   10 
 BH-1.72.0-1/BH/inst/include/boost/math/statistics                                                              |only
 BH-1.72.0-1/BH/inst/include/boost/math/tools/big_constant.hpp                                                  |   12 
 BH-1.72.0-1/BH/inst/include/boost/math/tools/bivariate_statistics.hpp                                          |only
 BH-1.72.0-1/BH/inst/include/boost/math/tools/complex.hpp                                                       |    5 
 BH-1.72.0-1/BH/inst/include/boost/math/tools/condition_numbers.hpp                                             |only
 BH-1.72.0-1/BH/inst/include/boost/math/tools/config.hpp                                                        |    2 
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 BH-1.72.0-1/BH/inst/include/boost/math/tools/norms.hpp                                                         |only
 BH-1.72.0-1/BH/inst/include/boost/math/tools/numerical_differentiation.hpp                                     |  261 
 BH-1.72.0-1/BH/inst/include/boost/math/tools/polynomial.hpp                                                    |   81 
 BH-1.72.0-1/BH/inst/include/boost/math/tools/recurrence.hpp                                                    |only
 BH-1.72.0-1/BH/inst/include/boost/math/tools/roots.hpp                                                         |  648 
 BH-1.72.0-1/BH/inst/include/boost/math/tools/series.hpp                                                        |   26 
 BH-1.72.0-1/BH/inst/include/boost/math/tools/signal_statistics.hpp                                             |only
 BH-1.72.0-1/BH/inst/include/boost/math/tools/univariate_statistics.hpp                                         |only
 BH-1.72.0-1/BH/inst/include/boost/move/algo/adaptive_merge.hpp                                                 |   61 
 BH-1.72.0-1/BH/inst/include/boost/move/algo/adaptive_sort.hpp                                                  |   30 
 BH-1.72.0-1/BH/inst/include/boost/move/algo/detail/adaptive_sort_merge.hpp                                     |  421 
 BH-1.72.0-1/BH/inst/include/boost/move/algo/detail/merge.hpp                                                   |  447 
 BH-1.72.0-1/BH/inst/include/boost/move/algo/detail/merge_sort.hpp                                              |   68 
 BH-1.72.0-1/BH/inst/include/boost/move/algo/detail/set_difference.hpp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/move/algo/predicate.hpp                                                      |   15 
 BH-1.72.0-1/BH/inst/include/boost/move/detail/meta_utils_core.hpp                                              |   17 
 BH-1.72.0-1/BH/inst/include/boost/move/detail/std_ns_begin.hpp                                                 |    3 
 BH-1.72.0-1/BH/inst/include/boost/mp11                                                                         |only
 BH-1.72.0-1/BH/inst/include/boost/mp11.hpp                                                                     |only
 BH-1.72.0-1/BH/inst/include/boost/mpi/collectives/all_gather.hpp                                               |    4 
 BH-1.72.0-1/BH/inst/include/boost/mpi/collectives/gather.hpp                                                   |    4 
 BH-1.72.0-1/BH/inst/include/boost/mpi/collectives/scatter.hpp                                                  |    4 
 BH-1.72.0-1/BH/inst/include/boost/mpi/collectives/scatterv.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/mpi/communicator.hpp                                                         |  485 
 BH-1.72.0-1/BH/inst/include/boost/mpi/config.hpp                                                               |   48 
 BH-1.72.0-1/BH/inst/include/boost/mpi/datatype.hpp                                                             |   12 
 BH-1.72.0-1/BH/inst/include/boost/mpi/detail/antiques.hpp                                                      |    4 
 BH-1.72.0-1/BH/inst/include/boost/mpi/detail/broadcast_sc.hpp                                                  |   17 
 BH-1.72.0-1/BH/inst/include/boost/mpi/detail/communicator_sc.hpp                                               |   38 
 BH-1.72.0-1/BH/inst/include/boost/mpi/detail/mpi_datatype_primitive.hpp                                        |    6 
 BH-1.72.0-1/BH/inst/include/boost/mpi/detail/offsets.hpp                                                       |    5 
 BH-1.72.0-1/BH/inst/include/boost/mpi/detail/point_to_point.hpp                                                |   27 
 BH-1.72.0-1/BH/inst/include/boost/mpi/detail/request_handlers.hpp                                              |only
 BH-1.72.0-1/BH/inst/include/boost/mpi/graph_communicator.hpp                                                   |    1 
 BH-1.72.0-1/BH/inst/include/boost/mpi/nonblocking.hpp                                                          |   63 
 BH-1.72.0-1/BH/inst/include/boost/mpi/operations.hpp                                                           |    5 
 BH-1.72.0-1/BH/inst/include/boost/mpi/request.hpp                                                              |  140 
 BH-1.72.0-1/BH/inst/include/boost/mpi/skeleton_and_content.hpp                                                 |  330 
 BH-1.72.0-1/BH/inst/include/boost/mpi/skeleton_and_content_types.hpp                                           |only
 BH-1.72.0-1/BH/inst/include/boost/mpi/status.hpp                                                               |    1 
 BH-1.72.0-1/BH/inst/include/boost/mpl/assert.hpp                                                               |   22 
 BH-1.72.0-1/BH/inst/include/boost/mpl/if.hpp                                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/mpl/print.hpp                                                                |   18 
 BH-1.72.0-1/BH/inst/include/boost/multi_array.hpp                                                              |   24 
 BH-1.72.0-1/BH/inst/include/boost/multi_array/algorithm.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/multi_array/index_range.hpp                                                  |    6 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/allocator_traits.hpp                                      |only
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/auto_space.hpp                                            |   44 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/bidir_node_iterator.hpp                                   |    4 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/bucket_array.hpp                                          |   14 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/copy_map.hpp                                              |   66 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/duplicates_iterator.hpp                                   |    5 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/hash_index_iterator.hpp                                   |    4 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/hash_index_node.hpp                                       |   61 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/index_base.hpp                                            |   36 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/ord_index_impl.hpp                                        |   33 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/ord_index_node.hpp                                        |   61 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/rnd_index_loader.hpp                                      |   22 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/rnd_index_node.hpp                                        |   57 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/rnd_index_ptr_array.hpp                                   |   40 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/rnd_node_iterator.hpp                                     |   10 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/detail/seq_index_node.hpp                                        |   36 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/hashed_index.hpp                                                 |   80 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/mem_fun.hpp                                                      |   96 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/random_access_index.hpp                                          |   62 
 BH-1.72.0-1/BH/inst/include/boost/multi_index/sequenced_index.hpp                                              |   63 
 BH-1.72.0-1/BH/inst/include/boost/multi_index_container.hpp                                                    |  114 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/complex128.hpp                                                |   17 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/complex_adaptor.hpp                                           |  139 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/concepts/mp_number_archetypes.hpp                             |   70 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/cpp_bin_float.hpp                                             |  996 
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 BH-1.72.0-1/BH/inst/include/boost/multiprecision/cpp_bin_float/transcendental.hpp                              |   47 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/cpp_complex.hpp                                               |   40 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/cpp_dec_float.hpp                                             | 1934 -
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/cpp_int.hpp                                                   | 1475 -
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/cpp_int/add.hpp                                               |  372 
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 BH-1.72.0-1/BH/inst/include/boost/multiprecision/cpp_int/checked.hpp                                           |   63 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/cpp_int/comparison.hpp                                        |  352 
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 BH-1.72.0-1/BH/inst/include/boost/multiprecision/cpp_int/limits.hpp                                            |  240 
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 BH-1.72.0-1/BH/inst/include/boost/multiprecision/cpp_int/value_pack.hpp                                        |   30 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/debug_adaptor.hpp                                             |  316 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/big_lanczos.hpp                                        |   26 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/bitscan.hpp                                            |  211 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/constexpr.hpp                                          |only
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/default_ops.hpp                                        | 2731 +-
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/digits.hpp                                             |    6 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/dynamic_array.hpp                                      |   30 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/et_ops.hpp                                             |  637 
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 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/functions/pow.hpp                                      |  450 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/functions/trig.hpp                                     |  341 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/generic_interconvert.hpp                               |  235 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/integer_ops.hpp                                        |  265 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/min_max.hpp                                            |   48 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/no_et_ops.hpp                                          |  246 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/number_base.hpp                                        | 1021 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/number_compare.hpp                                     |  536 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/precision.hpp                                          |  238 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/rebind.hpp                                             |   19 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/ublas_interop.hpp                                      |   32 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/detail/utype_helper.hpp                                       |  448 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/eigen.hpp                                                     |  228 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/float128.hpp                                                  |  568 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/gmp.hpp                                                       | 1201 -
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/integer.hpp                                                   |  131 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/logged_adaptor.hpp                                            |  352 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/miller_rabin.hpp                                              |  142 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/mpc.hpp                                                       |  232 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/mpfi.hpp                                                      |  563 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/mpfr.hpp                                                      | 1183 -
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/number.hpp                                                    | 1080 -
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/random.hpp                                                    |    5 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/rational_adaptor.hpp                                          |  158 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/tommath.hpp                                                   |  331 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/traits/explicit_conversion.hpp                                |  111 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/traits/extract_exponent_type.hpp                              |   10 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/traits/is_backend.hpp                                         |  102 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/traits/is_byte_container.hpp                                  |   33 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/traits/is_restricted_conversion.hpp                           |   34 
 BH-1.72.0-1/BH/inst/include/boost/multiprecision/traits/is_variable_precision.hpp                              |   14 
 BH-1.72.0-1/BH/inst/include/boost/numeric/conversion/converter_policies.hpp                                    |    7 
 BH-1.72.0-1/BH/inst/include/boost/numeric/interval/detail/x86gcc_rounding_control.hpp                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/numeric/interval/limits.hpp                                                  |   14 
 BH-1.72.0-1/BH/inst/include/boost/numeric/interval/utility.hpp                                                 |    3 
 BH-1.72.0-1/BH/inst/include/boost/numeric/interval/utility_fwd.hpp                                             |only
 BH-1.72.0-1/BH/inst/include/boost/numeric/odeint.hpp                                                           |    3 
 BH-1.72.0-1/BH/inst/include/boost/numeric/odeint/algebra/multi_array_algebra.hpp                               |   18 
 BH-1.72.0-1/BH/inst/include/boost/numeric/odeint/algebra/vector_space_algebra.hpp                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/numeric/odeint/external/eigen/eigen_algebra.hpp                              |   45 
 BH-1.72.0-1/BH/inst/include/boost/numeric/odeint/stepper/adaptive_adams_bashforth_moulton.hpp                  |only
 BH-1.72.0-1/BH/inst/include/boost/numeric/odeint/stepper/bulirsch_stoer_dense_out.hpp                          |    7 
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 BH-1.72.0-1/BH/inst/include/boost/numeric/odeint/stepper/controlled_runge_kutta.hpp                            |   24 
 BH-1.72.0-1/BH/inst/include/boost/numeric/odeint/stepper/dense_output_runge_kutta.hpp                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/numeric/odeint/stepper/detail/adaptive_adams_coefficients.hpp                |only
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 BH-1.72.0-1/BH/inst/include/boost/numeric/odeint/stepper/generation.hpp                                        |    1 
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 BH-1.72.0-1/BH/inst/include/boost/numeric/odeint/stepper/rosenbrock4_dense_output.hpp                          |   19 
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 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/assignment.hpp                                                 |   59 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/detail/concepts.hpp                                            |  114 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/detail/matrix_assign.hpp                                       |  161 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/detail/returntype_deduction.hpp                                |    4 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/detail/vector_assign.hpp                                       |   47 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/functional.hpp                                                 |   74 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/matrix.hpp                                                     |   43 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/matrix_expression.hpp                                          |10374 +++++-----
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/matrix_sparse.hpp                                              |    6 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/matrix_vector.hpp                                              |  128 
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 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/operation/begin.hpp                                            |  566 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/storage.hpp                                                    |   43 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/storage_sparse.hpp                                             |    7 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/tensor                                                         |only
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/tensor.hpp                                                     |only
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/traits.hpp                                                     |   28 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/vector.hpp                                                     |   17 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/vector_expression.hpp                                          |   26 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/vector_of_vector.hpp                                           |    4 
 BH-1.72.0-1/BH/inst/include/boost/numeric/ublas/vector_sparse.hpp                                              |   33 
 BH-1.72.0-1/BH/inst/include/boost/parameter.hpp                                                                |   17 
 BH-1.72.0-1/BH/inst/include/boost/parameter/are_tagged_arguments.hpp                                           |only
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 BH-1.72.0-1/BH/inst/include/boost/parameter/aux_/arg_list.hpp                                                  | 1604 +
 BH-1.72.0-1/BH/inst/include/boost/parameter/aux_/as_lvalue.hpp                                                 |only
 BH-1.72.0-1/BH/inst/include/boost/parameter/aux_/augment_predicate.hpp                                         |only
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 BH-1.72.0-1/BH/inst/include/boost/parameter/aux_/is_maybe.hpp                                                  |   62 
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 BH-1.72.0-1/BH/inst/include/boost/parameter/aux_/parameter_requirements.hpp                                    |   23 
 BH-1.72.0-1/BH/inst/include/boost/parameter/aux_/pp_impl                                                       |only
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 BH-1.72.0-1/BH/inst/include/boost/parameter/aux_/result_of0.hpp                                                |   77 
 BH-1.72.0-1/BH/inst/include/boost/parameter/aux_/set.hpp                                                       |  136 
 BH-1.72.0-1/BH/inst/include/boost/parameter/aux_/tag.hpp                                                       |  176 
 BH-1.72.0-1/BH/inst/include/boost/parameter/aux_/tagged_argument.hpp                                           | 1024 
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 BH-1.72.0-1/BH/inst/include/boost/parameter/aux_/use_default_tag.hpp                                           |only
 BH-1.72.0-1/BH/inst/include/boost/parameter/aux_/void.hpp                                                      |   45 
 BH-1.72.0-1/BH/inst/include/boost/parameter/aux_/yesno.hpp                                                     |   42 
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 BH-1.72.0-1/BH/inst/include/boost/parameter/match.hpp                                                          |   75 
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 BH-1.72.0-1/BH/inst/include/boost/parameter/parameters.hpp                                                     | 1437 -
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 BH-1.72.0-1/BH/inst/include/boost/pending/bucket_sorter.hpp                                                    |   37 
 BH-1.72.0-1/BH/inst/include/boost/pending/property_serialize.hpp                                               |   23 
 BH-1.72.0-1/BH/inst/include/boost/pending/relaxed_heap.hpp                                                     |    4 
 BH-1.72.0-1/BH/inst/include/boost/phoenix/version.hpp                                                          |   12 
 BH-1.72.0-1/BH/inst/include/boost/polygon/detail/voronoi_ctypes.hpp                                            |only
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 BH-1.72.0-1/BH/inst/include/boost/predef/architecture/arm.h                                                    |   87 
 BH-1.72.0-1/BH/inst/include/boost/predef/os.h                                                                  |    3 
 BH-1.72.0-1/BH/inst/include/boost/predef/os/android.h                                                          |    3 
 BH-1.72.0-1/BH/inst/include/boost/predef/os/bsd.h                                                              |    4 
 BH-1.72.0-1/BH/inst/include/boost/predef/os/bsd/net.h                                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/predef/os/linux.h                                                            |    5 
 BH-1.72.0-1/BH/inst/include/boost/predef/platform.h                                                            |    1 
 BH-1.72.0-1/BH/inst/include/boost/predef/platform/android.h                                                    |only
 BH-1.72.0-1/BH/inst/include/boost/predef/platform/ios.h                                                        |    6 
 BH-1.72.0-1/BH/inst/include/boost/predef/version.h                                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/array/detail/get_data.hpp                                       |   40 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/array/to_list.hpp                                               |   14 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/array/to_seq.hpp                                                |   14 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/array/to_tuple.hpp                                              |   14 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/config/config.hpp                                               |    2 
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 BH-1.72.0-1/BH/inst/include/boost/preprocessor/repetition/for.hpp                                              |   14 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/seq/detail/binary_transform.hpp                                 |    6 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/seq/detail/is_empty.hpp                                         |   22 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/seq/for_each.hpp                                                |   54 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/seq/for_each_i.hpp                                              |   56 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/seq/replace.hpp                                                 |   14 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/seq/rest_n.hpp                                                  |   18 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/tuple/detail/is_single_return.hpp                               |    6 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/tuple/elem.hpp                                                  |    8 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/tuple/insert.hpp                                                |    4 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/tuple/pop_back.hpp                                              |   32 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/tuple/pop_front.hpp                                             |   32 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/tuple/push_back.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/tuple/push_front.hpp                                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/tuple/rem.hpp                                                   |   20 
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 BH-1.72.0-1/BH/inst/include/boost/preprocessor/tuple/to_list.hpp                                               |    4 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/tuple/to_seq.hpp                                                |    4 
 BH-1.72.0-1/BH/inst/include/boost/preprocessor/variadic.hpp                                                    |    1 
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 BH-1.72.0-1/BH/inst/include/boost/progress.hpp                                                                 |    3 
 BH-1.72.0-1/BH/inst/include/boost/proto/debug.hpp                                                              |   25 
 BH-1.72.0-1/BH/inst/include/boost/proto/expr.hpp                                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/proto/extends.hpp                                                            |    4 
 BH-1.72.0-1/BH/inst/include/boost/proto/generate.hpp                                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/proto/proto_fwd.hpp                                                          |    4 
 BH-1.72.0-1/BH/inst/include/boost/ptr_container/detail/reversible_ptr_container.hpp                            |  262 
 BH-1.72.0-1/BH/inst/include/boost/ptr_container/ptr_sequence_adapter.hpp                                       |  274 
 BH-1.72.0-1/BH/inst/include/boost/ptr_container/ptr_vector.hpp                                                 |   45 
 BH-1.72.0-1/BH/inst/include/boost/python/detail/caller.hpp                                                     |   31 
 BH-1.72.0-1/BH/inst/include/boost/python/detail/unwind_type.hpp                                                |   12 
 BH-1.72.0-1/BH/inst/include/boost/python/detail/wrap_python.hpp                                                |   34 
 BH-1.72.0-1/BH/inst/include/boost/python/list.hpp                                                              |    2 
 BH-1.72.0-1/BH/inst/include/boost/qvm/detail/vec_assign.hpp                                                    |only
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 BH-1.72.0-1/BH/inst/include/boost/random/detail/integer_log2.hpp                                               |    2 
 BH-1.72.0-1/BH/inst/include/boost/random/discrete_distribution.hpp                                             |    4 
 BH-1.72.0-1/BH/inst/include/boost/range/algorithm/max_element.hpp                                              |   40 
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 BH-1.72.0-1/BH/inst/include/boost/rational.hpp                                                                 |   40 
 BH-1.72.0-1/BH/inst/include/boost/regex/config.hpp                                                             |    4 
 BH-1.72.0-1/BH/inst/include/boost/regex/v4/basic_regex.hpp                                                     |    2 
 BH-1.72.0-1/BH/inst/include/boost/regex/v4/instances.hpp                                                       |   29 
 BH-1.72.0-1/BH/inst/include/boost/regex/v4/perl_matcher_non_recursive.hpp                                      |    6 
 BH-1.72.0-1/BH/inst/include/boost/serialization/collection_size_type.hpp                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/serialization/nvp.hpp                                                        |  154 
 BH-1.72.0-1/BH/inst/include/boost/serialization/singleton.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/serialization/throw_exception.hpp                                            |    4 
 BH-1.72.0-1/BH/inst/include/boost/signals2/detail/auto_buffer.hpp                                              |   20 
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 BH-1.72.0-1/BH/inst/include/boost/signals2/detail/signal_template.hpp                                          |    4 
 BH-1.72.0-1/BH/inst/include/boost/signals2/detail/slot_call_iterator.hpp                                       |   21 
 BH-1.72.0-1/BH/inst/include/boost/signals2/signal_type.hpp                                                     |   41 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/allocate_local_shared_array.hpp                                    |  151 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/allocate_shared_array.hpp                                          |  464 
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 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/atomic_shared_ptr.hpp                                              |    9 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/bad_weak_ptr.hpp                                                   |    4 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/atomic_count_std_atomic.hpp                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/local_counted_base.hpp                                      |    4 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/local_sp_deleter.hpp                                        |    6 
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 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_cw_ppc.hpp                                  |    6 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_cw_x86.hpp                                  |    6 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_gcc_ia64.hpp                                |    6 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_gcc_mips.hpp                                |    6 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_gcc_ppc.hpp                                 |    6 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_gcc_sparc.hpp                               |    6 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_gcc_x86.hpp                                 |    6 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_nt.hpp                                      |   34 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_pt.hpp                                      |   17 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_snc_ps3.hpp                                 |    6 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_solaris.hpp                                 |    6 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_spin.hpp                                    |    6 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_std_atomic.hpp                              |   35 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_sync.hpp                                    |    6 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_vacpp_ppc.hpp                               |    6 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_base_w32.hpp                                     |    6 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_counted_impl.hpp                                         |   39 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/sp_typeinfo_.hpp                                            |only
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/spinlock_std_atomic.hpp                                     |   11 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/detail/yield_k.hpp                                                 |    4 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/enable_shared_from.hpp                                             |only
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/enable_shared_from_raw.hpp                                         |    3 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/intrusive_ptr.hpp                                                  |   27 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/make_local_shared_array.hpp                                        |   49 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/make_local_shared_object.hpp                                       |    7 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/make_shared_array.hpp                                              |   44 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/make_unique.hpp                                                    |   75 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/shared_array.hpp                                                   |    4 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/shared_ptr.hpp                                                     |   22 
 BH-1.72.0-1/BH/inst/include/boost/smart_ptr/weak_ptr.hpp                                                       |   29 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/classic/core/assert.hpp                                          |    4 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/classic/core/scanner/scanner.hpp                                 |    5 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/classic/error_handling/exceptions.hpp                            |    6 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/classic/iterator/impl/position_iterator.ipp                      |   18 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/classic/iterator/multi_pass.hpp                                  |   17 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/classic/iterator/position_iterator_fwd.hpp                       |    6 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/classic/tree/common.hpp                                          |    5 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/classic/utility/impl/escape_char.ipp                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/classic/utility/regex.hpp                                        |    4 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/classic/version.hpp                                              |   13 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/action/action.hpp                                          |    6 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/auto/auto.hpp                                              |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/auxiliary/lazy.hpp                                         |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/binary/binary.hpp                                          |   28 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/detail/alternative_function.hpp                            |    6 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/detail/attributes.hpp                                      |   26 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/detail/fail_function.hpp                                   |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/detail/indirect_iterator.hpp                               |    9 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/detail/pass_container.hpp                                  |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/detail/unused_delimiter.hpp                                |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/directive/center_alignment.hpp                             |    1 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/directive/columns.hpp                                      |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/directive/left_alignment.hpp                               |    1 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/directive/maxwidth.hpp                                     |    1 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/directive/omit.hpp                                         |    7 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/directive/repeat.hpp                                       |    9 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/directive/right_alignment.hpp                              |    1 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/nonterminal/rule.hpp                                       |   16 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/numeric/detail/numeric_utils.hpp                           |    5 
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 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/stream/stream.hpp                                          |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/karma/string/symbols.hpp                                         |   12 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/detail/sequence_function.hpp                                 |    6 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/lexer/action.hpp                                             |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/lexer/lexer.hpp                                              |   25 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/lexer/lexertl/functor.hpp                                    |    7 
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 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/lexer/lexertl/iterator_tokenizer.hpp                         |    9 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/lexer/lexertl/lexer.hpp                                      |    8 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/lexer/lexertl/position_token.hpp                             |    1 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/lexer/lexertl/static_functor_data.hpp                        |   15 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/lexer/lexertl/static_lexer.hpp                               |    7 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/lexer/lexertl/token.hpp                                      |    1 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/lexer/token_def.hpp                                          |    4 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/qi/plain_raw_token.hpp                                       |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/qi/plain_token.hpp                                           |    5 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/qi/plain_tokenid.hpp                                         |    5 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/qi/plain_tokenid_mask.hpp                                    |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/qi/state_switcher.hpp                                        |    6 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/lex/tokenize_and_parse_attr.hpp                                  |   48 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/action/action.hpp                                             |   18 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/auxiliary/attr.hpp                                            |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/auxiliary/attr_cast.hpp                                       |    5 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/binary/binary.hpp                                             |   28 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/detail/alternative_function.hpp                               |   10 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/detail/attributes.hpp                                         |   44 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/detail/expect_function.hpp                                    |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/detail/expectation_failure.hpp                                |    2 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/detail/fail_function.hpp                                      |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/detail/pass_container.hpp                                     |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/detail/pass_function.hpp                                      |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/detail/permute_function.hpp                                   |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/detail/unused_skipper.hpp                                     |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/directive/matches.hpp                                         |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/directive/omit.hpp                                            |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/directive/repeat.hpp                                          |   12 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/nonterminal/rule.hpp                                          |   40 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/numeric/detail/numeric_utils.hpp                              |   66 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/numeric/detail/real_impl.hpp                                  |   88 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/numeric/real_policies.hpp                                     |   71 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/stream/detail/iterator_source.hpp                             |   22 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/stream/detail/match_manip.hpp                                 |    9 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/string/detail/tst.hpp                                         |    8 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/string/lit.hpp                                                |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/qi/string/symbols.hpp                                            |   11 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/attributes.hpp                                           |  115 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/attributes_fwd.hpp                                       |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/char_class.hpp                                           |   29 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/char_encoding/ascii.hpp                                  |   37 
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 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/char_encoding/standard_wide.hpp                          |   62 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/char_encoding/unicode.hpp                                |    1 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/container.hpp                                            |    4 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/detail/endian/endian.hpp                                 |   53 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/detail/hold_any.hpp                                      |   26 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/detail/lexer/generate_cpp.hpp                            |    1 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/detail/lexer/input.hpp                                   |    4 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/detail/what_function.hpp                                 |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/info.hpp                                                 |    6 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/iterators/detail/buf_id_check_policy.hpp                 |    6 
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 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/nonterminal/expand_arg.hpp                               |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/numeric_traits.hpp                                       |   11 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/terminal.hpp                                             |    9 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/unused.hpp                                               |   25 
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 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/utree/operators.hpp                                      |    7 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/utree/utree.hpp                                          |    9 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/support/utree/utree_traits.hpp                                   |   16 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/auxiliary/attr.hpp                                            |    6 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/binary/binary.hpp                                             |    1 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/char/any_char.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/char/char_class.hpp                                           |   14 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/char/char_set.hpp                                             |   21 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/char/detail/cast_char.hpp                                     |    7 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/char/literal_char.hpp                                         |    5 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/char/unicode.hpp                                              |   45 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/core/action.hpp                                               |    8 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/core/detail/parse_into_container.hpp                          |   25 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/directive/expect.hpp                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/directive/raw.hpp                                             |   16 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/nonterminal/detail/rule.hpp                                   |   17 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/nonterminal/detail/transform_attribute.hpp                    |   32 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/nonterminal/rule.hpp                                          |   43 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/nonterminal/simple_trace.hpp                                  |    6 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/numeric/real.hpp                                              |    3 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/numeric/real_policies.hpp                                     |   19 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/operator/detail/alternative.hpp                               |    8 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/operator/detail/sequence.hpp                                  |  107 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/operator/optional.hpp                                         |    2 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/string/detail/tst.hpp                                         |    9 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/string/literal_string.hpp                                     |   29 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/string/symbols.hpp                                            |   84 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/support/ast/position_tagged.hpp                               |    4 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/support/ast/variant.hpp                                       |    7 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/support/no_case.hpp                                           |   35 
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 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/support/subcontext.hpp                                        |    1 
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 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/support/traits/move_to.hpp                                    |    8 
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 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/support/traits/pseudo_attribute.hpp                           |only
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 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/support/unused.hpp                                            |   29 
 BH-1.72.0-1/BH/inst/include/boost/spirit/home/x3/version.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/spirit/include/version.hpp                                                   |    2 
 BH-1.72.0-1/BH/inst/include/boost/spirit/repository/home/karma/nonterminal/subrule.hpp                         |   17 
 BH-1.72.0-1/BH/inst/include/boost/spirit/repository/home/qi/directive/kwd.hpp                                  |   33 
 BH-1.72.0-1/BH/inst/include/boost/spirit/repository/home/qi/nonterminal/subrule.hpp                            |   26 
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 BH-1.72.0-1/BH/inst/include/boost/spirit/repository/home/qi/operator/keywords.hpp                              |    4 
 BH-1.72.0-1/BH/inst/include/boost/static_assert.hpp                                                            |    4 
 BH-1.72.0-1/BH/inst/include/boost/system/detail/config.hpp                                                     |   16 
 BH-1.72.0-1/BH/inst/include/boost/system/detail/generic_category.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/system/detail/std_interoperability.hpp                                       |   61 
 BH-1.72.0-1/BH/inst/include/boost/system/detail/system_category_win32.hpp                                      |   65 
 BH-1.72.0-1/BH/inst/include/boost/system/error_code.hpp                                                        |   41 
 BH-1.72.0-1/BH/inst/include/boost/test/detail/config.hpp                                                       |   33 
 BH-1.72.0-1/BH/inst/include/boost/test/detail/fwd_decl.hpp                                                     |    1 
 BH-1.72.0-1/BH/inst/include/boost/test/detail/global_typedef.hpp                                               |   14 
 BH-1.72.0-1/BH/inst/include/boost/test/detail/log_level.hpp                                                    |    4 
 BH-1.72.0-1/BH/inst/include/boost/test/detail/suppress_warnings.hpp                                            |    1 
 BH-1.72.0-1/BH/inst/include/boost/test/execution_monitor.hpp                                                   |    9 
 BH-1.72.0-1/BH/inst/include/boost/test/floating_point_comparison.hpp                                           |    4 
 BH-1.72.0-1/BH/inst/include/boost/test/framework.hpp                                                           |   10 
 BH-1.72.0-1/BH/inst/include/boost/test/impl/compiler_log_formatter.ipp                                         |   16 
 BH-1.72.0-1/BH/inst/include/boost/test/impl/debug.ipp                                                          |   18 
 BH-1.72.0-1/BH/inst/include/boost/test/impl/decorator.ipp                                                      |   46 
 BH-1.72.0-1/BH/inst/include/boost/test/impl/execution_monitor.ipp                                              |  204 
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 BH-1.72.0-1/BH/inst/include/boost/test/impl/junit_log_formatter.ipp                                            |   52 
 BH-1.72.0-1/BH/inst/include/boost/test/impl/plain_report_formatter.ipp                                         |   13 
 BH-1.72.0-1/BH/inst/include/boost/test/impl/results_collector.ipp                                              |   53 
 BH-1.72.0-1/BH/inst/include/boost/test/impl/test_tools.ipp                                                     |   12 
 BH-1.72.0-1/BH/inst/include/boost/test/impl/test_tree.ipp                                                      |   34 
 BH-1.72.0-1/BH/inst/include/boost/test/impl/unit_test_log.ipp                                                  |   19 
 BH-1.72.0-1/BH/inst/include/boost/test/impl/unit_test_main.ipp                                                 |    1 
 BH-1.72.0-1/BH/inst/include/boost/test/impl/unit_test_monitor.ipp                                              |    4 
 BH-1.72.0-1/BH/inst/include/boost/test/impl/xml_log_formatter.ipp                                              |   20 
 BH-1.72.0-1/BH/inst/include/boost/test/impl/xml_report_formatter.ipp                                           |   10 
 BH-1.72.0-1/BH/inst/include/boost/test/minimal.hpp                                                             |    3 
 BH-1.72.0-1/BH/inst/include/boost/test/output/compiler_log_formatter.hpp                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/test/output/junit_log_formatter.hpp                                          |    3 
 BH-1.72.0-1/BH/inst/include/boost/test/output/xml_log_formatter.hpp                                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/test/output_test_stream.hpp                                                  |    4 
 BH-1.72.0-1/BH/inst/include/boost/test/results_collector.hpp                                                   |    5 
 BH-1.72.0-1/BH/inst/include/boost/test/test_case_template.hpp                                                  |    4 
 BH-1.72.0-1/BH/inst/include/boost/test/tools/collection_comparison_op.hpp                                      |    8 
 BH-1.72.0-1/BH/inst/include/boost/test/tools/context.hpp                                                       |   37 
 BH-1.72.0-1/BH/inst/include/boost/test/tools/cstring_comparison_op.hpp                                         |    4 
 BH-1.72.0-1/BH/inst/include/boost/test/tools/detail/print_helper.hpp                                           |    1 
 BH-1.72.0-1/BH/inst/include/boost/test/tools/floating_point_comparison.hpp                                     |   21 
 BH-1.72.0-1/BH/inst/include/boost/test/tools/fpc_op.hpp                                                        |   17 
 BH-1.72.0-1/BH/inst/include/boost/test/tree/decorator.hpp                                                      |   39 
 BH-1.72.0-1/BH/inst/include/boost/test/tree/global_fixture.hpp                                                 |   16 
 BH-1.72.0-1/BH/inst/include/boost/test/tree/observer.hpp                                                       |   16 
 BH-1.72.0-1/BH/inst/include/boost/test/tree/test_case_counter.hpp                                              |   12 
 BH-1.72.0-1/BH/inst/include/boost/test/tree/test_case_template.hpp                                             |   69 
 BH-1.72.0-1/BH/inst/include/boost/test/tree/test_unit.hpp                                                      |    8 
 BH-1.72.0-1/BH/inst/include/boost/test/unit_test_log.hpp                                                       |    3 
 BH-1.72.0-1/BH/inst/include/boost/test/unit_test_log_formatter.hpp                                             |   11 
 BH-1.72.0-1/BH/inst/include/boost/test/unit_test_monitor.hpp                                                   |    3 
 BH-1.72.0-1/BH/inst/include/boost/test/unit_test_suite.hpp                                                     |   27 
 BH-1.72.0-1/BH/inst/include/boost/test/utils/basic_cstring/basic_cstring.hpp                                   |   37 
 BH-1.72.0-1/BH/inst/include/boost/test/utils/basic_cstring/basic_cstring_fwd.hpp                               |   12 
 BH-1.72.0-1/BH/inst/include/boost/test/utils/foreach.hpp                                                       |    1 
 BH-1.72.0-1/BH/inst/include/boost/test/utils/is_cstring.hpp                                                    |   43 
 BH-1.72.0-1/BH/inst/include/boost/test/utils/lazy_ostream.hpp                                                  |    5 
 BH-1.72.0-1/BH/inst/include/boost/test/utils/rtti.hpp                                                          |    5 
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 BH-1.72.0-1/BH/inst/include/boost/test/utils/runtime/errors.hpp                                                |    6 
 BH-1.72.0-1/BH/inst/include/boost/test/utils/setcolor.hpp                                                      |   10 
 BH-1.72.0-1/BH/inst/include/boost/test/utils/timer.hpp                                                         |only
 BH-1.72.0-1/BH/inst/include/boost/thread/detail/config.hpp                                                     |   10 
 BH-1.72.0-1/BH/inst/include/boost/thread/detail/thread.hpp                                                     |    9 
 BH-1.72.0-1/BH/inst/include/boost/thread/executors/executor.hpp                                                |    2 
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 BH-1.72.0-1/BH/inst/include/boost/thread/executors/work.hpp                                                    |    4 
 BH-1.72.0-1/BH/inst/include/boost/thread/future.hpp                                                            |    1 
 BH-1.72.0-1/BH/inst/include/boost/thread/futures/wait_for_any.hpp                                              |    1 
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 BH-1.72.0-1/BH/inst/include/boost/thread/pthread/condition_variable_fwd.hpp                                    |   19 
 BH-1.72.0-1/BH/inst/include/boost/thread/pthread/mutex.hpp                                                     |   48 
 BH-1.72.0-1/BH/inst/include/boost/thread/pthread/once.hpp                                                      |   55 
 BH-1.72.0-1/BH/inst/include/boost/thread/pthread/pthread_helpers.hpp                                           |  179 
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 BH-1.72.0-1/BH/inst/include/boost/thread/pthread/recursive_mutex.hpp                                           |   38 
 BH-1.72.0-1/BH/inst/include/boost/thread/pthread/thread_data.hpp                                               |   13 
 BH-1.72.0-1/BH/inst/include/boost/thread/tss.hpp                                                               |   64 
 BH-1.72.0-1/BH/inst/include/boost/thread/win32/shared_mutex.hpp                                                |   17 
 BH-1.72.0-1/BH/inst/include/boost/thread/win32/thread_data.hpp                                                 |   11 
 BH-1.72.0-1/BH/inst/include/boost/thread/win32/thread_primitives.hpp                                           |    2 
 BH-1.72.0-1/BH/inst/include/boost/throw_exception.hpp                                                          |    2 
 BH-1.72.0-1/BH/inst/include/boost/timer.hpp                                                                    |    3 
 BH-1.72.0-1/BH/inst/include/boost/timer/config.hpp                                                             |   15 
 BH-1.72.0-1/BH/inst/include/boost/tti/detail/dmem_fun.hpp                                                      |   24 
 BH-1.72.0-1/BH/inst/include/boost/tti/detail/dtype.hpp                                                         |   12 
 BH-1.72.0-1/BH/inst/include/boost/type_index.hpp                                                               |    2 
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 BH-1.72.0-1/BH/inst/include/boost/type_index/type_index_facade.hpp                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/type_traits.hpp                                                              |    2 
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 BH-1.72.0-1/BH/inst/include/boost/type_traits/has_minus.hpp                                                    |   12 
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 BH-1.72.0-1/BH/inst/include/boost/type_traits/is_complete.hpp                                                  |    2 
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 BH-1.72.0-1/BH/inst/include/boost/utility/string_ref.hpp                                                       |   45 
 BH-1.72.0-1/BH/inst/include/boost/utility/string_view.hpp                                                      |   47 
 BH-1.72.0-1/BH/inst/include/boost/uuid/basic_name_generator.hpp                                                |    4 
 BH-1.72.0-1/BH/inst/include/boost/uuid/detail/config.hpp                                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/uuid/detail/md5.hpp                                                          |   49 
 BH-1.72.0-1/BH/inst/include/boost/uuid/detail/random_provider.hpp                                              |    2 
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 BH-1.72.0-1/BH/inst/include/boost/uuid/detail/sha1.hpp                                                         |    4 
 BH-1.72.0-1/BH/inst/include/boost/uuid/detail/uuid_generic.ipp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/uuid/detail/uuid_x86.ipp                                                     |    2 
 BH-1.72.0-1/BH/inst/include/boost/uuid/entropy_error.hpp                                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/uuid/name_generator.hpp                                                      |    2 
 BH-1.72.0-1/BH/inst/include/boost/uuid/name_generator_md5.hpp                                                  |    2 
 BH-1.72.0-1/BH/inst/include/boost/uuid/name_generator_sha1.hpp                                                 |    2 
 BH-1.72.0-1/BH/inst/include/boost/uuid/nil_generator.hpp                                                       |    2 
 BH-1.72.0-1/BH/inst/include/boost/uuid/random_generator.hpp                                                    |    2 
 BH-1.72.0-1/BH/inst/include/boost/uuid/string_generator.hpp                                                    |    5 
 BH-1.72.0-1/BH/inst/include/boost/uuid/uuid.hpp                                                                |    2 
 BH-1.72.0-1/BH/inst/include/boost/uuid/uuid_generators.hpp                                                     |    2 
 BH-1.72.0-1/BH/inst/include/boost/uuid/uuid_hash.hpp                                                           |    6 
 BH-1.72.0-1/BH/inst/include/boost/uuid/uuid_io.hpp                                                             |    2 
 BH-1.72.0-1/BH/inst/include/boost/uuid/uuid_serialize.hpp                                                      |    2 
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 BH-1.72.0-1/BH/inst/include/boost/variant/detail/make_variant_list.hpp                                         |    2 
 BH-1.72.0-1/BH/inst/include/boost/variant/detail/move.hpp                                                      |    2 
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 BH-1.72.0-1/BH/inst/include/boost/variant/get.hpp                                                              |    4 
 BH-1.72.0-1/BH/inst/include/boost/variant/recursive_variant.hpp                                                |    2 
 BH-1.72.0-1/BH/inst/include/boost/variant/recursive_wrapper_fwd.hpp                                            |    2 
 BH-1.72.0-1/BH/inst/include/boost/variant/static_visitor.hpp                                                   |    2 
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 BH-1.72.0-1/BH/inst/include/boost/variant/variant_fwd.hpp                                                      |    2 
 BH-1.72.0-1/BH/inst/include/boost/variant/visitor_ptr.hpp                                                      |   29 
 BH-1.72.0-1/BH/inst/include/boost/version.hpp                                                                  |    4 
 BH-1.72.0-1/BH/inst/include/boost/winapi/handles.hpp                                                           |    4 
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Package porridge updated to version 0.0.4 with previous version 0.0.3 dated 2019-12-05

Title: Ridge-Type Penalized Estimation of a Potpourri of Models
Description: The name of the package is derived from the French, 'pour' ridge, and provides functionality for ridge-type estimation of a potpourri of models. Currently, this estimation concerns that of various Gaussian graphical models from different study designs. Among others it considers the regular Gaussian graphical model and a mixture of such models. The porridge-package implements the estimation of the former either from i) data with replicated observations by penalized loglikelihood maximization using the regular ridge penalty on the parameters (van Wieringen, Chen, 2019) or ii) from non-replicated data by means of the generalized ridge estimator that allows for both the inclusion of quantitative and qualitative prior information on the precision matrix via element-wise penalization and shrinkage (van Wieringen, 2019, <doi.org/10.1080/10618600.2019.1604374>). Additionally, the porridge-package facilitates the ridge penalized estimation of a mixture of Gaussian graphical models (Aflakparast et al., 2018, <doi.org/10.1002/bimj.201700102>).
Author: Wessel N. van Wieringen [aut, cre], Mehran Aflakparast [ctb] (part of the R-code of the mixture functionality)
Maintainer: Wessel N. van Wieringen <w.vanwieringen@vumc.nl>

Diff between porridge versions 0.0.3 dated 2019-12-05 and 0.0.4 dated 2019-12-16

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Package stddiff updated to version 3.0 with previous version 2.0 dated 2017-04-12

Title: Calculate the Standardized Difference for Numeric, Binary and Category Variables
Description: Contains three main functions including stddiff.numeric(), stddiff.binary() and stddiff.category(). These are used to calculate the standardized difference between two groups. It is especially used to evaluate the balance between two groups before and after propensity score matching.
Author: Zhicheng Du, Yuantao Hao
Maintainer: Zhicheng Du<dgdzc@hotmail.com>

Diff between stddiff versions 2.0 dated 2017-04-12 and 3.0 dated 2019-12-16

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Package shazam updated to version 0.2.2 with previous version 0.2.1 dated 2019-07-19

Title: Immunoglobulin Somatic Hypermutation Analysis
Description: Provides a computational framework for analyzing mutations in immunoglobulin (Ig) sequences. Includes methods for Bayesian estimation of antigen-driven selection pressure, mutational load quantification, building of somatic hypermutation (SHM) models, and model-dependent distance calculations. Also includes empirically derived models of SHM for both mice and humans. Citations: Gupta and Vander Heiden, et al (2015) <doi:10.1093/bioinformatics/btv359>, Yaari, et al (2012) <doi:10.1093/nar/gks457>, Yaari, et al (2013) <doi:10.3389/fimmu.2013.00358>, Cui, et al (2016) <doi:10.4049/jimmunol.1502263>.
Author: Mohamed Uduman [aut], Gur Yaari [aut], Namita Gupta [aut], Jason Vander Heiden [aut, cre], Ang Cui [ctb], Susanna Marquez [ctb], Julian Zhou [ctb], Nima Nouri [ctb], Steven Kleinstein [aut, cph]
Maintainer: Jason Vander Heiden <jason.vanderheiden@yale.edu>

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Package rattle updated to version 5.3.0 with previous version 5.2.0 dated 2018-08-17

Title: Graphical User Interface for Data Science in R
Description: The R Analytic Tool To Learn Easily (Rattle) provides a collection of utilities functions for the data scientist. A Gnome (RGtk2) based graphical interface is included with the aim to provide a simple and intuitive introduction to R for data science, allowing a user to quickly load data from a CSV file (or via ODBC), transform and explore the data, build and evaluate models, and export models as PMML (predictive modelling markup language) or as scores. A key aspect of the GUI is that all R commands are logged and commented through the log tab. This can be saved as a standalone R script file and as an aid for the user to learn R or to copy-and-paste directly into R itself.
Author: Graham Williams [aut, cph, cre], Mark Vere Culp [cph], Ed Cox [ctb], Anthony Nolan [ctb], Denis White [cph], Daniele Medri [ctb], Akbar Waljee [ctb] (OOB AUC for Random Forest), Brian Ripley [cph] (print.summary.nnet), Jose Magana [ctb] (ggpairs plots), Surendra Tipparaju [ctb] (initial RevoScaleR/XDF), Durga Prasad Chappidi [ctb] (initial RevoScaleR/XDF), Dinesh Manyam Venkata [ctb] (initial RevoScaleR/XDF), Mrinal Chakraborty [ctb] (initial RevoScaleR/XDF), Fang Zhou [ctb] (initial xgboost), Cameron Chisholm [ctb] (risk plot on risk chart)
Maintainer: Graham Williams <Graham.Williams@togaware.com>

Diff between rattle versions 5.2.0 dated 2018-08-17 and 5.3.0 dated 2019-12-16

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Package propr updated to version 4.2.6 with previous version 4.1.6 dated 2019-07-10

Title: Calculating Proportionality Between Vectors of Compositional Data
Description: The bioinformatic evaluation of gene co-expression often begins with correlation-based analyses. However, correlation lacks validity when applied to relative data, including count data generated by next-generation sequencing. This package implements several metrics for proportionality, including phi [Lovell et al (2015) <DOI:10.1371/journal.pcbi.1004075>] and rho [Erb and Notredame (2016) <DOI:10.1007/s12064-015-0220-8>]. This package also implements several metrics for differential proportionality. Unlike correlation, these measures give the same result for both relative and absolute data.
Author: Thomas Quinn [aut, cre], David Lovell [aut], Ionas Erb [aut], Anders Bilgrau [ctb], Greg Gloor [ctb], Ryan Moore [ctb]
Maintainer: Thomas Quinn <contacttomquinn@gmail.com>

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Package PAutilities updated to version 0.3.1 with previous version 0.3.0 dated 2019-10-29

Title: Streamline Physical Activity Research
Description: A collection of utilities that are useful for a broad range of tasks that are common in physical activity research, including the following: creation of Bland-Altman plots, formatted descriptive statistics, metabolic calculations (e.g. basal metabolic rate predictions) and conversions, demographic calculations (age and age-for-body-mass-index percentile), bout analysis of moderate-to-vigorous intensity physical activity, and analysis of bout detection algorithm performance.
Author: Paul R. Hibbing [aut, cre], Centers for Disease Control and Prevention [ctb]
Maintainer: Paul R. Hibbing <paulhibbing@gmail.com>

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Package ggeffects updated to version 0.14.0 with previous version 0.13.0 dated 2019-11-08

Title: Create Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs
Description: Compute marginal effects from statistical models and returns the result as tidy data frames. These data frames are ready to use with the 'ggplot2'-package. Marginal effects can be calculated for many different models. Interaction terms, splines and polynomial terms are also supported. The main functions are ggpredict(), ggemmeans() and ggeffect(). There is a generic plot()-method to plot the results using 'ggplot2'.
Author: Daniel Lüdecke [aut, cre] (<https://orcid.org/0000-0002-8895-3206>), Frederik Aust [ctb] (<https://orcid.org/0000-0003-4900-788X>)
Maintainer: Daniel Lüdecke <d.luedecke@uke.de>

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Package glmmboot updated to version 0.5.0 with previous version 0.4.0 dated 2019-09-02

Title: Bootstrap Resampling for Mixed Effects and Plain Models
Description: Performs bootstrap resampling for most models that update() works for. There are two primary functions: bootstrap_model() performs block resampling if random effects are present, and case resampling if not; bootstrap_ci() converts output from bootstrap model runs into confidence intervals and p-values. By default, bootstrap_model() calls bootstrap_ci(). Package motivated by Humphrey and Swingley (2018) <arXiv:1805.08670>.
Author: Colman Humphrey [aut, cre]
Maintainer: Colman Humphrey <humphrc@tcd.ie>

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Package formulaic updated to version 0.0.5 with previous version 0.0.4 dated 2019-10-08

Title: Dynamic Generation and Quality Checks of Formula Objects
Description: Many statistical models and analyses in R are implemented through formula objects. The formulaic package creates a unified approach for programmatically and dynamically generating formula objects. Users may specify the outcome and inputs of a model directly, search for variables to include based upon naming patterns, incorporate interactions, and identify variables to exclude. A wide range of quality checks are implemented to identify issues such as misspecified variables, duplication, a lack of contrast in the inputs, and a large number of levels in categorical data. Variables that do not meet these quality checks can be automatically excluded from the model. These issues are documented and reported in a manner that provides greater accountability and useful information to guide an investigation of the data.
Author: David Shilane [aut], Caffrey Lee [ctb], Zichen Huang [ctb], Anderson Nelson [ctb, cre]
Maintainer: Anderson Nelson <an2908@columbia.edu>

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Package echogram updated to version 0.1.2 with previous version 0.1.1 dated 2017-08-03

Title: Echogram Visualisation and Analysis
Description: Easily import multi-frequency acoustic data stored in 'HAC' files (see <http://biblio.uqar.ca/archives/30005500.pdf> for more information on the format), and produce echogram visualisations with predefined or customized color palettes. It is also possible to merge consecutive echograms; mask or delete unwanted echogram areas; model and subtract background noise; and more important, develop, test and interpret different combinations of frequencies in order to perform acoustic filtering of the echogram's data.
Author: Héctor Villalobos [aut, cre]
Maintainer: Héctor Villalobos <hvillalo@ipn.mx>

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Package deepgmm updated to version 0.1.59 with previous version 0.1.56 dated 2019-02-22

Title: Deep Gaussian Mixture Models
Description: Deep Gaussian mixture models as proposed by Viroli and McLachlan (2019) <doi:10.1007/s11222-017-9793-z> provide a generalization of classical Gaussian mixtures to multiple layers. Each layer contains a set of latent variables that follow a mixture of Gaussian distributions. To avoid overparameterized solutions, dimension reduction is applied at each layer by way of factor models.
Author: Cinzia Viroli, Geoffrey J. McLachlan
Maintainer: Suren Rathnayake <surenr@gmail.com>

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