Title: Sample Size Calculation for the Comparison of Means or
Proportions in Phase III Clinical Trials
Description: There are four categories of Phase III clinical trials according to different research goals, including (1) Testing for equality, (2) Superiority trial, (3) Non-inferiority trial, and (4) Equivalence trial. This package aims to help researchers to calculate sample size when comparing means or proportions in Phase III clinical trials with different research goals.
Author: Hongchao Qi, Fang Zhu
Maintainer: Hongchao Qi <hcqi.biostat@gmail.com>
Diff between SampleSize4ClinicalTrials versions 0.1.1 dated 2019-09-20 and 0.1.2 dated 2020-01-31
SampleSize4ClinicalTrials-0.1.1/SampleSize4ClinicalTrials/R/SampleSize4ClinicalTrials.R |only SampleSize4ClinicalTrials-0.1.1/SampleSize4ClinicalTrials/man/ssc.Rd |only SampleSize4ClinicalTrials-0.1.2/SampleSize4ClinicalTrials/DESCRIPTION | 12 ++++---- SampleSize4ClinicalTrials-0.1.2/SampleSize4ClinicalTrials/MD5 | 14 +++++----- SampleSize4ClinicalTrials-0.1.2/SampleSize4ClinicalTrials/NAMESPACE | 3 +- SampleSize4ClinicalTrials-0.1.2/SampleSize4ClinicalTrials/R/manual_namespace_gen.R | 2 - SampleSize4ClinicalTrials-0.1.2/SampleSize4ClinicalTrials/R/ssc_meancomp.R |only SampleSize4ClinicalTrials-0.1.2/SampleSize4ClinicalTrials/R/ssc_propcomp.R |only SampleSize4ClinicalTrials-0.1.2/SampleSize4ClinicalTrials/man/SampleSize4ClinicalTrials.Rd | 2 - SampleSize4ClinicalTrials-0.1.2/SampleSize4ClinicalTrials/man/ssc_meancomp.Rd |only SampleSize4ClinicalTrials-0.1.2/SampleSize4ClinicalTrials/man/ssc_propcomp.Rd |only 11 files changed, 18 insertions(+), 15 deletions(-)
More information about SampleSize4ClinicalTrials at CRAN
Permanent link
Title: Projected Spatial Gaussian Process Methods
Description: Implements projected sparse Gaussian process Kriging (Ingram 'et. al.', 2008, <doi:10.1007/s00477-007-0163-9>) as an additional method for the 'intamap' package. More details on implementation (Barillec 'et. al.', 2010, <doi:10.1016/j.cageo.2010.05.008>).
Author: Ben Ingram <ingrambr.work@gmail.com>, Remi Barillec <remi@igiltd.com>, Jon Olav Skoien <jon.skoien@gmail.com>
Maintainer: Ben Ingram <ingrambr.work@gmail.com>
Diff between psgp versions 0.3-18 dated 2018-04-22 and 0.3-19 dated 2020-01-31
ChangeLog | 3 +++ DESCRIPTION | 12 ++++++------ MD5 | 18 ++++++++++-------- src/CovarianceFunction.cpp | 2 +- src/PSGP.cpp | 2 +- src/psgp_data.cpp | 8 ++++---- src/psgp_estimator.cpp | 2 +- tests/meuse_psgp.Rout |only tests/meuse_psgp.Rout.save | 40 ++++++++++++++++++++-------------------- tests/psgp.Rout |only tests/psgp.Rout.save | 40 ++++++++++++++++++++-------------------- 11 files changed, 66 insertions(+), 61 deletions(-)
Title: Named Capture to Data Tables
Description: User-friendly functions for extracting a data
table (row for each match, column for each group)
from non-tabular text data using regular expressions,
and for melting columns that match a regular expression.
Patterns are defined using a readable syntax
that makes it easy to build complex patterns
in terms of simpler, re-usable sub-patterns.
Named R arguments are translated to column names
in the output; capture groups without names are used
internally in order to provide a standard interface
to three regular expression C libraries (PCRE, RE2, ICU).
Output can also include numeric columns via
user-specified type conversion functions.
Author: Toby Dylan Hocking
Maintainer: Toby Dylan Hocking <toby.hocking@r-project.org>
Diff between nc versions 2019.10.19 dated 2019-10-28 and 2020.1.16 dated 2020-01-31
DESCRIPTION | 6 - MD5 | 65 ++++++---- NAMESPACE | 1 NEWS | 19 +++ R/capture_all_str.R | 196 ++++++++++++++++++++------------- R/capture_first_df.R | 6 - R/capture_first_vec.R | 9 + R/capture_melt_multiple.R | 13 +- R/capture_melt_single.R | 5 R/field.R | 6 - R/group.R | 61 +++++----- R/quantifier.R |only R/var_args_list.R | 5 inst/doc/v1-capture-first.html | 6 - inst/extdata/compress-sizes.out |only inst/extdata/compress-times.out |only inst/extdata/vignette.Rmd |only inst/extdata/vignette.Rnw |only man/apply_type_funs.Rd | 3 man/capture_all_str.Rd | 201 +++++++++++++++++++++------------- man/capture_df_names.Rd | 3 man/capture_first_df.Rd | 6 - man/capture_first_vec.Rd | 6 - man/capture_melt_multiple.Rd | 16 +- man/capture_melt_single.Rd | 8 - man/field.Rd | 5 man/group.Rd | 59 ++++----- man/only_captures.Rd | 3 man/quantifier.Rd |only man/stop_for_capture_same_as_id.Rd | 3 man/stop_for_subject.Rd | 3 man/try_or_stop_print_pattern.Rd | 3 tests/testthat/test-CRAN-df.R | 2 tests/testthat/test-CRAN-field.R | 8 + tests/testthat/test-CRAN-group.R | 18 +++ tests/testthat/test-CRAN-quantifier.R |only tests/testthat/test-CRAN-vec.R | 12 ++ 37 files changed, 474 insertions(+), 283 deletions(-)
Title: Tuning for 'mlr3'
Description: Implements methods for hyperparameter tuning with
'mlr3', e.g. Grid Search, Random Search, or Simulated Annealing.
Various termination criteria can be set and combined. The class
'AutoTuner' provides a convenient way to perform nested resampling in
combination with 'mlr3'.
Author: Michel Lang [cre, aut] (<https://orcid.org/0000-0001-9754-0393>),
Jakob Richter [aut] (<https://orcid.org/0000-0003-4481-5554>),
Bernd Bischl [aut] (<https://orcid.org/0000-0001-6002-6980>),
Daniel Schalk [aut] (<https://orcid.org/0000-0003-0950-1947>)
Maintainer: Michel Lang <michellang@gmail.com>
Diff between mlr3tuning versions 0.1.1 dated 2019-12-06 and 0.1.2 dated 2020-01-31
mlr3tuning-0.1.1/mlr3tuning/man/TerminatorClockTime.Rd |only mlr3tuning-0.1.1/mlr3tuning/man/TerminatorCombo.Rd |only mlr3tuning-0.1.1/mlr3tuning/man/TerminatorEvals.Rd |only mlr3tuning-0.1.1/mlr3tuning/man/TerminatorModelTime.Rd |only mlr3tuning-0.1.1/mlr3tuning/man/TerminatorNone.Rd |only mlr3tuning-0.1.1/mlr3tuning/man/TerminatorPerfReached.Rd |only mlr3tuning-0.1.1/mlr3tuning/man/TerminatorStagnation.Rd |only mlr3tuning-0.1.1/mlr3tuning/man/TunerDesignPoints.Rd |only mlr3tuning-0.1.1/mlr3tuning/man/TunerGenSA.Rd |only mlr3tuning-0.1.1/mlr3tuning/man/TunerGridSearch.Rd |only mlr3tuning-0.1.1/mlr3tuning/man/TunerRandomSearch.Rd |only mlr3tuning-0.1.2/mlr3tuning/DESCRIPTION | 12 - mlr3tuning-0.1.2/mlr3tuning/MD5 | 78 +++++----- mlr3tuning-0.1.2/mlr3tuning/NEWS.md | 6 mlr3tuning-0.1.2/mlr3tuning/R/AutoTuner.R | 5 mlr3tuning-0.1.2/mlr3tuning/R/Terminator.R | 2 mlr3tuning-0.1.2/mlr3tuning/R/TerminatorClockTime.R | 2 mlr3tuning-0.1.2/mlr3tuning/R/TerminatorCombo.R | 2 mlr3tuning-0.1.2/mlr3tuning/R/TerminatorEvals.R | 2 mlr3tuning-0.1.2/mlr3tuning/R/TerminatorModelTime.R | 2 mlr3tuning-0.1.2/mlr3tuning/R/TerminatorNone.R | 2 mlr3tuning-0.1.2/mlr3tuning/R/TerminatorPerfReached.R | 2 mlr3tuning-0.1.2/mlr3tuning/R/TerminatorStagnation.R | 2 mlr3tuning-0.1.2/mlr3tuning/R/Tuner.R | 6 mlr3tuning-0.1.2/mlr3tuning/R/TunerDesignPoints.R | 2 mlr3tuning-0.1.2/mlr3tuning/R/TunerGenSA.R | 2 mlr3tuning-0.1.2/mlr3tuning/R/TunerGridSearch.R | 2 mlr3tuning-0.1.2/mlr3tuning/R/TunerRandomSearch.R | 2 mlr3tuning-0.1.2/mlr3tuning/R/TuningInstance.R | 19 +- mlr3tuning-0.1.2/mlr3tuning/README.md | 6 mlr3tuning-0.1.2/mlr3tuning/man/Terminator.Rd | 16 +- mlr3tuning-0.1.2/mlr3tuning/man/Tuner.Rd | 12 - mlr3tuning-0.1.2/mlr3tuning/man/TuningInstance.Rd | 4 mlr3tuning-0.1.2/mlr3tuning/man/mlr_terminators.Rd | 16 +- mlr3tuning-0.1.2/mlr3tuning/man/mlr_terminators_clock_time.Rd |only mlr3tuning-0.1.2/mlr3tuning/man/mlr_terminators_combo.Rd |only mlr3tuning-0.1.2/mlr3tuning/man/mlr_terminators_evals.Rd |only mlr3tuning-0.1.2/mlr3tuning/man/mlr_terminators_model_time.Rd |only mlr3tuning-0.1.2/mlr3tuning/man/mlr_terminators_none.Rd |only mlr3tuning-0.1.2/mlr3tuning/man/mlr_terminators_perf_reached.Rd |only mlr3tuning-0.1.2/mlr3tuning/man/mlr_terminators_stagnation.Rd |only mlr3tuning-0.1.2/mlr3tuning/man/mlr_tuners.Rd | 10 - mlr3tuning-0.1.2/mlr3tuning/man/mlr_tuners_design_points.Rd |only mlr3tuning-0.1.2/mlr3tuning/man/mlr_tuners_gensa.Rd |only mlr3tuning-0.1.2/mlr3tuning/man/mlr_tuners_grid_search.Rd |only mlr3tuning-0.1.2/mlr3tuning/man/mlr_tuners_random_search.Rd |only mlr3tuning-0.1.2/mlr3tuning/tests/testthat.R | 13 - mlr3tuning-0.1.2/mlr3tuning/tests/testthat/test_AutoTuner.R | 49 +++++- mlr3tuning-0.1.2/mlr3tuning/tests/testthat/test_Tuner.R | 1 mlr3tuning-0.1.2/mlr3tuning/tests/testthat/test_TunerGenSA.R | 1 mlr3tuning-0.1.2/mlr3tuning/tests/testthat/test_TuningInstance.R | 45 ++++- 51 files changed, 200 insertions(+), 123 deletions(-)
Title: Bayesian Semiparametric Models for Interval-Censored Data
Description: Contains functions to fit Bayesian semiparametric regression survival models (proportional hazards model, proportional odds model, and probit model) to interval-censored time-to-event data.
Author: Chun Pan, Bo Cai, Lianming Wang, and Xiaoyan Lin
Maintainer: Chun Pan <chunpan2003@hotmail.com>
Diff between ICBayes versions 1.1 dated 2017-09-24 and 1.2 dated 2020-01-31
DESCRIPTION | 8 ++-- MD5 | 24 +++++++------- NAMESPACE | 2 - R/ICBayes.default.R | 59 ++++++++++++++++++++++++++++++---- R/ICBayes.formula.R | 2 - R/case1ph.R | 59 +++++++++++++++++++++++++++++++--- R/case2ph.R | 83 ++++++++++++++++++++++++++++++++++++------------- R/case2probit.R | 72 ++++++++++++++++++++++++------------------ R/summary.ICBayes.R | 23 ++++++++----- man/ICBayes-package.Rd | 4 +- man/ICBayes.Rd | 12 ++++--- man/case2probit.Rd | 3 + man/summary.ICBayes.Rd | 6 --- 13 files changed, 254 insertions(+), 103 deletions(-)
Title: Tools for Mapping of Quantitative Traits of Genetically Related
Individuals and Calculating Identity Coefficients from
Pedigrees
Description: This software provides tools for quantitative trait mapping in populations such as advanced intercross lines where relatedness among individuals should not be ignored. It can estimate background genetic variance components, impute missing genotypes, simulate genotypes, perform a genome scan for putative quantitative trait loci (QTL), and plot mapping results. It also has functions to calculate identity coefficients from pedigrees, especially suitable for pedigrees that consist of a large number of generations, or estimate identity coefficients from genotypic data in certain circumstances.
Author: Riyan Cheng [aut, cre]
Maintainer: Riyan Cheng <riyancheng@hotmail.com>
Diff between QTLRel versions 1.4 dated 2019-11-09 and 1.5 dated 2020-01-31
ChangeLog | 3 +- DESCRIPTION | 8 +++--- MD5 | 26 ++++++++++----------- R/estVC.R | 15 ++++-------- R/hapSim.R | 4 +-- R/idcoef.R | 28 +++++++++++----------- R/pedRecode.R | 53 ++++++++++++++++++++++++++++++------------- R/qtl2rel.R | 4 +-- data/miscEx.RData |binary inst/doc/QTLRel_Tutorial.pdf |binary man/cic.Rd | 2 - man/genoSim.Rd | 2 - man/hapSim.Rd | 2 - man/nullSim.Rd | 2 - 14 files changed, 84 insertions(+), 65 deletions(-)
Title: An R Wrapper for the 'OpenTripPlanner' REST API
Description: A wrapper for the 'OpenTripPlanner' <http://www.opentripplanner.org/>
REST API. Queries are submitted to the relevant 'OpenTripPlanner' API resource, the response
is parsed and useful R objects are returned.
Author: Marcus Young [aut, cre]
Maintainer: Marcus Young <M.A.Young@soton.ac.uk>
Diff between otpr versions 0.2.0 dated 2019-08-28 and 0.3.0 dated 2020-01-31
DESCRIPTION | 9 +-- MD5 | 14 ++-- R/otp-connect.R | 15 +++++ R/otp_get_times.R | 108 +++++++++++++++++++++++++++++++------- README.md | 12 ++-- man/figures/unnamed-chunk-7-1.png |binary man/otp_connect.Rd | 9 ++- man/otp_get_times.Rd | 6 +- 8 files changed, 136 insertions(+), 37 deletions(-)
Title: Fast and Easy Data Cleaning
Description: Data cleaning functions for classes logical,
factor, numeric, character, currency and Date to make
data cleaning fast and easy. Relying on very few dependencies, it
provides smart guessing, but with user options to override
anything if needed.
Author: Matthijs S. Berends [aut, cre]
(<https://orcid.org/0000-0001-7620-1800>)
Maintainer: Matthijs S. Berends <m.s.berends@umcg.nl>
Diff between cleaner versions 1.3.0 dated 2020-01-24 and 1.3.1 dated 2020-01-31
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- NEWS.md | 5 +++++ R/helpers.R | 1 + R/percentage.R | 3 ++- 5 files changed, 16 insertions(+), 9 deletions(-)
Title: Actigraphy Data Analysis
Description: Functional linear modeling and analysis for actigraphy data.
Author: William Shannon, Tao Li, Hong Xian, Jia Wang, Elena Deych, Carlos Gonzalez
Maintainer: Berkley Shands <rpackages@biorankings.com>
Diff between Actigraphy versions 1.3.2 dated 2016-01-15 and 1.4.0 dated 2020-01-31
DESCRIPTION | 11 +- MD5 | 68 ++++++------- R/Ftest.R | 140 ++++++++++++++-------------- R/cat_flm_plot.R | 50 +++++----- R/cont_flm_plot.R | 67 ++++++------- R/fda.matchid.R | 98 +++++++++---------- R/fda.smoothdata.R | 38 +++---- R/flm_cate.R | 66 ++++++------- R/flm_ftest.R | 84 ++++++++-------- build/vignette.rds |binary data/act_29pt.rda |binary data/act_8pt.rda |binary data/clinic_29pt_ahi.rda |binary data/clinic_29pt_bmi.rda |binary data/clinic_8pt.rda |binary data/weekday.rda |binary inst/doc/Categorical-FDA-Tutorial.R | 22 +--- inst/doc/Categorical-FDA-Tutorial.Rnw | 24 +--- inst/doc/Categorical-FDA-Tutorial.pdf |binary inst/doc/Continuous-FDA-Tutorial.R | 20 +--- inst/doc/Continuous-FDA-Tutorial.Rnw | 22 +--- inst/doc/Continuous-FDA-Tutorial.pdf |binary inst/doc/Figures-from-Referenced-Paper.R | 24 ++-- inst/doc/Figures-from-Referenced-Paper.Rnw | 24 ++-- inst/doc/Figures-from-Referenced-Paper.pdf |binary man/act_29pt.Rd | 6 - man/act_8pt.Rd | 6 - man/cat_flm_plot.Rd | 7 - man/cont_flm_plot.Rd | 8 - man/fda.matchid.Rd | 20 ++-- man/fda.smoothdata.Rd | 8 - man/flm_cate.Rd | 6 - vignettes/Categorical-FDA-Tutorial.Rnw | 24 +--- vignettes/Continuous-FDA-Tutorial.Rnw | 22 +--- vignettes/Figures-from-Referenced-Paper.Rnw | 24 ++-- 35 files changed, 415 insertions(+), 474 deletions(-)
Title: Fast R and C++ Access to NIfTI Images
Description: Provides very fast read and write access to images stored in the
NIfTI-1 and ANALYZE-7.5 formats, with seamless synchronisation between
compiled C and interpreted R code. Also provides a simple image viewer, and
a C/C++ API that can be used by other packages. Not to be confused with
'RNiftyReg', which performs image registration.
Author: Jon Clayden [cre, aut],
Bob Cox [aut],
Mark Jenkinson [aut],
Matt Hall [ctb],
Rick Reynolds [ctb],
Kate Fissell [ctb],
Jean-loup Gailly [cph],
Mark Adler [cph]
Maintainer: Jon Clayden <code@clayden.org>
Diff between RNifti versions 1.0.1 dated 2019-11-27 and 1.1.0 dated 2020-01-31
DESCRIPTION | 8 MD5 | 230 ++++---- NAMESPACE | 1 NEWS | 18 R/rgb.R | 2 R/viewer.R | 145 ++++- inst/doxygen/html/a00002_source.html | 221 ++++---- inst/doxygen/html/a00005.html | 25 inst/doxygen/html/a00007.html | 8 inst/doxygen/html/a00010.html | 8 inst/doxygen/html/a00011.html | 8 inst/doxygen/html/a00014.html | 8 inst/doxygen/html/a00015.html | 8 inst/doxygen/html/a00018.html | 14 inst/doxygen/html/a00019.html | 8 inst/doxygen/html/a00022.html | 14 inst/doxygen/html/a00023.html | 8 inst/doxygen/html/a00026.html | 14 inst/doxygen/html/a00027.html | 8 inst/doxygen/html/a00030.html | 14 inst/doxygen/html/a00031.html | 8 inst/doxygen/html/a00034.html | 14 inst/doxygen/html/a00035.html | 8 inst/doxygen/html/a00038.html | 8 inst/doxygen/html/a00039.html | 12 inst/doxygen/html/a00042.html | 28 - inst/doxygen/html/a00043.html | 8 inst/doxygen/html/a00046.html | 40 - inst/doxygen/html/a00047.html | 8 inst/doxygen/html/a00050.html | 8 inst/doxygen/html/annotated.html | 10 inst/doxygen/html/classes.html | 20 inst/doxygen/html/dir_2b5d1a398a9eec011391d543f21db223.html | 8 inst/doxygen/html/dir_359387c3df027e2c6e2c68fd6e935d9d.html | 8 inst/doxygen/html/dir_920884c6b3b2f0be94e27d51660adee5.html | 8 inst/doxygen/html/doxygen.css | 316 +++++++++--- inst/doxygen/html/dynsections.js | 6 inst/doxygen/html/files.html | 8 inst/doxygen/html/functions.html | 12 inst/doxygen/html/functions_func.html | 10 inst/doxygen/html/functions_vars.html | 8 inst/doxygen/html/hierarchy.html | 10 inst/doxygen/html/index.html | 13 inst/doxygen/html/jquery.js | 40 - inst/doxygen/html/menu.js | 2 inst/doxygen/html/menudata.js | 6 inst/doxygen/html/pages.html | 8 inst/doxygen/html/search/all_0.html | 4 inst/doxygen/html/search/all_1.html | 4 inst/doxygen/html/search/all_10.html | 4 inst/doxygen/html/search/all_11.html | 4 inst/doxygen/html/search/all_12.html | 4 inst/doxygen/html/search/all_13.html | 4 inst/doxygen/html/search/all_14.html | 4 inst/doxygen/html/search/all_15.html | 4 inst/doxygen/html/search/all_2.html | 4 inst/doxygen/html/search/all_3.html | 4 inst/doxygen/html/search/all_4.html | 4 inst/doxygen/html/search/all_5.html | 4 inst/doxygen/html/search/all_6.html | 4 inst/doxygen/html/search/all_7.html | 4 inst/doxygen/html/search/all_8.html | 4 inst/doxygen/html/search/all_9.html | 4 inst/doxygen/html/search/all_a.html | 4 inst/doxygen/html/search/all_b.html | 4 inst/doxygen/html/search/all_c.html | 4 inst/doxygen/html/search/all_d.html | 4 inst/doxygen/html/search/all_e.html | 4 inst/doxygen/html/search/all_f.html | 4 inst/doxygen/html/search/classes_0.html | 4 inst/doxygen/html/search/classes_1.html | 4 inst/doxygen/html/search/classes_2.html | 4 inst/doxygen/html/search/classes_3.html | 4 inst/doxygen/html/search/classes_4.html | 4 inst/doxygen/html/search/classes_5.html | 4 inst/doxygen/html/search/classes_6.html | 4 inst/doxygen/html/search/classes_7.html | 4 inst/doxygen/html/search/functions_0.html | 4 inst/doxygen/html/search/functions_1.html | 4 inst/doxygen/html/search/functions_10.html | 4 inst/doxygen/html/search/functions_11.html | 4 inst/doxygen/html/search/functions_12.html | 4 inst/doxygen/html/search/functions_13.html | 4 inst/doxygen/html/search/functions_14.html | 4 inst/doxygen/html/search/functions_2.html | 4 inst/doxygen/html/search/functions_3.html | 4 inst/doxygen/html/search/functions_4.html | 4 inst/doxygen/html/search/functions_5.html | 4 inst/doxygen/html/search/functions_6.html | 4 inst/doxygen/html/search/functions_7.html | 4 inst/doxygen/html/search/functions_8.html | 4 inst/doxygen/html/search/functions_9.html | 4 inst/doxygen/html/search/functions_a.html | 4 inst/doxygen/html/search/functions_b.html | 4 inst/doxygen/html/search/functions_c.html | 4 inst/doxygen/html/search/functions_d.html | 4 inst/doxygen/html/search/functions_e.html | 4 inst/doxygen/html/search/functions_f.html | 4 inst/doxygen/html/search/mag_sel.png |binary inst/doxygen/html/search/nomatches.html | 2 inst/doxygen/html/search/pages_0.html | 4 inst/doxygen/html/search/pages_1.html | 4 inst/doxygen/html/search/search_l.png |binary inst/doxygen/html/search/search_r.png |binary inst/doxygen/html/search/variables_0.html | 4 inst/doxygen/html/search/variables_1.html | 4 inst/doxygen/html/search/variables_2.html | 4 inst/doxygen/html/search/variables_3.html | 4 inst/doxygen/html/search/variables_4.html | 4 inst/doxygen/html/search/variables_5.html | 4 inst/doxygen/html/search/variables_6.html | 4 inst/doxygen/html/tabs.css | 2 inst/include/RNifti/NiftiImage_impl.h | 16 man/defaultInfoPanel.Rd | 8 man/view.Rd | 18 tests/testthat/test-12-viewer.R | 14 116 files changed, 999 insertions(+), 706 deletions(-)
Title: Interface to the Global 'Biodiversity' Information Facility API
Description: A programmatic interface to the Web Service methods
provided by the Global Biodiversity Information Facility ('GBIF';
<https://www.gbif.org/developer/summary>). 'GBIF' is a database
of species occurrence records from sources all over the globe.
'rgbif' includes functions for searching for taxonomic names,
retrieving information on data providers, getting species occurrence
records, getting counts of occurrence records, and using the 'GBIF'
tile map service to make 'rasters' summarizing huge amounts of data.
Author: Scott Chamberlain [aut, cre] (<https://orcid.org/0000-0003-1444-9135>),
Damiano Oldoni [aut] (<https://orcid.org/0000-0003-3445-7562>),
Vijay Barve [ctb] (<https://orcid.org/0000-0002-4852-2567>),
Peter Desmet [ctb] (<https://orcid.org/0000-0002-8442-8025>),
Laurens Geffert [ctb],
Dan Mcglinn [ctb] (<https://orcid.org/0000-0003-2359-3526>),
Karthik Ram [ctb] (<https://orcid.org/0000-0002-0233-1757>)
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>
Diff between rgbif versions 1.4.0 dated 2019-10-30 and 2.0.0 dated 2020-01-31
rgbif-1.4.0/rgbif/inst/vign |only rgbif-1.4.0/rgbif/tests/fixtures/datasets.yml |only rgbif-1.4.0/rgbif/tests/fixtures/datasets_deleted_duplicate.yml |only rgbif-1.4.0/rgbif/tests/fixtures/name_lookup.yml |only rgbif-1.4.0/rgbif/tests/fixtures/name_lookup_many_inputs.yml |only rgbif-1.4.0/rgbif/tests/fixtures/name_lookup_paging1.yml |only rgbif-1.4.0/rgbif/tests/fixtures/name_lookup_paging2.yml |only rgbif-1.4.0/rgbif/tests/fixtures/name_lookup_paging3.yml |only rgbif-1.4.0/rgbif/tests/fixtures/name_usage_return_param.yml |only rgbif-1.4.0/rgbif/tests/fixtures/occ_data.yml |only rgbif-1.4.0/rgbif/tests/fixtures/occ_data_datasetkey.yml |only rgbif-1.4.0/rgbif/tests/fixtures/occ_data_event_date.yml |only rgbif-1.4.0/rgbif/tests/fixtures/occ_data_geometry.yml |only rgbif-1.4.0/rgbif/tests/fixtures/occ_data_looping.yml |only rgbif-1.4.0/rgbif/tests/fixtures/occ_issues.yml |only rgbif-1.4.0/rgbif/tests/fixtures/occ_issues_type_many.yml |only rgbif-1.4.0/rgbif/tests/fixtures/occ_search.yml |only rgbif-1.4.0/rgbif/tests/fixtures/occ_search_datasetkey.yml |only rgbif-1.4.0/rgbif/tests/fixtures/occ_search_eventdate.yml |only rgbif-1.4.0/rgbif/tests/fixtures/occ_search_geometry.yml |only rgbif-1.4.0/rgbif/tests/fixtures/occ_search_looping_works.yml |only rgbif-1.4.0/rgbif/tests/fixtures/occ_search_taxonkey.yml |only rgbif-1.4.0/rgbif/tests/fixtures/organizations.yml |only rgbif-2.0.0/rgbif/DESCRIPTION | 14 rgbif-2.0.0/rgbif/LICENSE | 2 rgbif-2.0.0/rgbif/MD5 | 226 +- rgbif-2.0.0/rgbif/NAMESPACE | 16 rgbif-2.0.0/rgbif/NEWS.md | 21 rgbif-2.0.0/rgbif/R/download_predicate_dsl.R |only rgbif-2.0.0/rgbif/R/download_queue.R | 137 - rgbif-2.0.0/rgbif/R/downloads.R | 5 rgbif-2.0.0/rgbif/R/gbif_citation.R | 16 rgbif-2.0.0/rgbif/R/occ_count.r | 2 rgbif-2.0.0/rgbif/R/occ_download.R | 327 --- rgbif-2.0.0/rgbif/R/occ_download_cancel.R | 3 rgbif-2.0.0/rgbif/R/occ_download_dataset_activity.R | 34 rgbif-2.0.0/rgbif/R/occ_download_datasets.R | 30 rgbif-2.0.0/rgbif/R/occ_download_get.r | 2 rgbif-2.0.0/rgbif/R/occ_download_import.R | 2 rgbif-2.0.0/rgbif/R/occ_download_list.R | 28 rgbif-2.0.0/rgbif/R/occ_download_meta.R | 9 rgbif-2.0.0/rgbif/R/occ_download_queue.R | 65 rgbif-2.0.0/rgbif/R/occ_download_utils.R |only rgbif-2.0.0/rgbif/R/occ_download_wait.R |only rgbif-2.0.0/rgbif/R/zzz.r | 35 rgbif-2.0.0/rgbif/README.md | 208 +- rgbif-2.0.0/rgbif/build/vignette.rds |binary rgbif-2.0.0/rgbif/inst/doc/downloads.R |only rgbif-2.0.0/rgbif/inst/doc/downloads.Rmd | 91 rgbif-2.0.0/rgbif/inst/doc/downloads.html | 852 ++++---- rgbif-2.0.0/rgbif/inst/doc/issues.R |only rgbif-2.0.0/rgbif/inst/doc/issues.Rmd | 272 -- rgbif-2.0.0/rgbif/inst/doc/issues.html | 775 +++---- rgbif-2.0.0/rgbif/inst/doc/rgbif.R |only rgbif-2.0.0/rgbif/inst/doc/rgbif.Rmd | 450 ---- rgbif-2.0.0/rgbif/inst/doc/rgbif.html | 982 +++------- rgbif-2.0.0/rgbif/inst/doc/taxonomic_names.R |only rgbif-2.0.0/rgbif/inst/doc/taxonomic_names.Rmd | 147 - rgbif-2.0.0/rgbif/inst/doc/taxonomic_names.html | 662 +++--- rgbif-2.0.0/rgbif/man/DownReq.Rd | 135 + rgbif-2.0.0/rgbif/man/GbifQueue.Rd | 221 +- rgbif-2.0.0/rgbif/man/check_wkt.Rd | 2 rgbif-2.0.0/rgbif/man/count_facet.Rd | 3 rgbif-2.0.0/rgbif/man/dataset_search.Rd | 23 rgbif-2.0.0/rgbif/man/dataset_suggest.Rd | 22 rgbif-2.0.0/rgbif/man/datasets.Rd | 12 rgbif-2.0.0/rgbif/man/download_predicates.Rd |only rgbif-2.0.0/rgbif/man/downloads.Rd | 11 rgbif-2.0.0/rgbif/man/elevation.Rd | 14 rgbif-2.0.0/rgbif/man/figures/rgbif_vign_1.png |only rgbif-2.0.0/rgbif/man/gbif_bbox2wkt.Rd | 3 rgbif-2.0.0/rgbif/man/gbif_citation.Rd | 13 rgbif-2.0.0/rgbif/man/gbif_oai.Rd | 22 rgbif-2.0.0/rgbif/man/installations.Rd | 13 rgbif-2.0.0/rgbif/man/map_fetch.Rd | 36 rgbif-2.0.0/rgbif/man/mvt_fetch.Rd | 24 rgbif-2.0.0/rgbif/man/name_backbone.Rd | 19 rgbif-2.0.0/rgbif/man/name_lookup.Rd | 29 rgbif-2.0.0/rgbif/man/name_suggest.Rd | 11 rgbif-2.0.0/rgbif/man/name_usage.Rd | 17 rgbif-2.0.0/rgbif/man/networks.Rd | 13 rgbif-2.0.0/rgbif/man/nodes.Rd | 14 rgbif-2.0.0/rgbif/man/occ_count.Rd | 21 rgbif-2.0.0/rgbif/man/occ_data.Rd | 82 rgbif-2.0.0/rgbif/man/occ_download.Rd | 199 +- rgbif-2.0.0/rgbif/man/occ_download_cancel.Rd | 23 rgbif-2.0.0/rgbif/man/occ_download_dataset_activity.Rd | 46 rgbif-2.0.0/rgbif/man/occ_download_datasets.Rd | 35 rgbif-2.0.0/rgbif/man/occ_download_get.Rd | 17 rgbif-2.0.0/rgbif/man/occ_download_import.Rd | 17 rgbif-2.0.0/rgbif/man/occ_download_list.Rd | 37 rgbif-2.0.0/rgbif/man/occ_download_meta.Rd | 20 rgbif-2.0.0/rgbif/man/occ_download_queue.Rd | 59 rgbif-2.0.0/rgbif/man/occ_download_wait.Rd |only rgbif-2.0.0/rgbif/man/occ_get.Rd | 9 rgbif-2.0.0/rgbif/man/occ_metadata.Rd | 9 rgbif-2.0.0/rgbif/man/occ_search.Rd | 94 rgbif-2.0.0/rgbif/man/organizations.Rd | 10 rgbif-2.0.0/rgbif/man/wkt_parse.Rd | 2 rgbif-2.0.0/rgbif/tests/fixtures/count_facet.yml | 400 ++-- rgbif-2.0.0/rgbif/tests/fixtures/gbif_citation.yml | 217 -- rgbif-2.0.0/rgbif/tests/fixtures/gbif_citation_error.yml | 190 - rgbif-2.0.0/rgbif/tests/fixtures/gbif_citation_occ_data.yml |only rgbif-2.0.0/rgbif/tests/fixtures/occ_count.yml | 110 - rgbif-2.0.0/rgbif/tests/fixtures/occ_download_dataset_activity.yml |only rgbif-2.0.0/rgbif/tests/fixtures/occ_download_dataset_activity_error.yml |only rgbif-2.0.0/rgbif/tests/fixtures/occ_download_datasets.yml |only rgbif-2.0.0/rgbif/tests/fixtures/occ_download_datasets_error.yml |only rgbif-2.0.0/rgbif/tests/fixtures/occ_download_list.yml |only rgbif-2.0.0/rgbif/tests/fixtures/occ_download_list_unauthorized.yml |only rgbif-2.0.0/rgbif/tests/fixtures/occ_download_wait_request.yml |only rgbif-2.0.0/rgbif/tests/testthat/occ_download_wait_obj.rda |only rgbif-2.0.0/rgbif/tests/testthat/test-count_facet.r | 2 rgbif-2.0.0/rgbif/tests/testthat/test-datasets.r | 3 rgbif-2.0.0/rgbif/tests/testthat/test-download_parsing.R | 87 rgbif-2.0.0/rgbif/tests/testthat/test-downloads.R | 41 rgbif-2.0.0/rgbif/tests/testthat/test-gbif_citation.R | 21 rgbif-2.0.0/rgbif/tests/testthat/test-name_lookup.r | 10 rgbif-2.0.0/rgbif/tests/testthat/test-name_usage.r | 2 rgbif-2.0.0/rgbif/tests/testthat/test-occ_data.R | 28 rgbif-2.0.0/rgbif/tests/testthat/test-occ_download_dataset_activity.R |only rgbif-2.0.0/rgbif/tests/testthat/test-occ_download_datasets.R |only rgbif-2.0.0/rgbif/tests/testthat/test-occ_download_list.R |only rgbif-2.0.0/rgbif/tests/testthat/test-occ_download_queue.R | 14 rgbif-2.0.0/rgbif/tests/testthat/test-occ_download_wait.R |only rgbif-2.0.0/rgbif/tests/testthat/test-occ_issues.R | 4 rgbif-2.0.0/rgbif/tests/testthat/test-occ_search.r | 25 rgbif-2.0.0/rgbif/tests/testthat/test-organizations.r | 2 rgbif-2.0.0/rgbif/tests/testthat/test-predicate_builders.R |only rgbif-2.0.0/rgbif/tests/testthat/test-utils.R |only rgbif-2.0.0/rgbif/vignettes/downloads.Rmd | 91 rgbif-2.0.0/rgbif/vignettes/issues.Rmd | 272 -- rgbif-2.0.0/rgbif/vignettes/rgbif.Rmd | 450 ---- rgbif-2.0.0/rgbif/vignettes/taxonomic_names.Rmd | 147 - 134 files changed, 3945 insertions(+), 4921 deletions(-)
Title: A Grammar of Data Manipulation
Description: A fast, consistent tool for working with data frame like objects,
both in memory and out of memory.
Author: Hadley Wickham [aut, cre] (<https://orcid.org/0000-0003-4757-117X>),
Romain François [aut] (<https://orcid.org/0000-0002-2444-4226>),
Lionel Henry [aut],
Kirill Müller [aut] (<https://orcid.org/0000-0002-1416-3412>),
RStudio [cph, fnd]
Maintainer: Hadley Wickham <hadley@rstudio.com>
Diff between dplyr versions 0.8.3 dated 2019-07-04 and 0.8.4 dated 2020-01-31
DESCRIPTION | 12 ++++----- MD5 | 20 ++++++++------- NEWS.md | 4 +++ build/dplyr.pdf |binary inst/doc/compatibility.html | 6 +++- inst/doc/dplyr.html | 26 +++++++++++++------- inst/doc/programming.html | 18 ++++++++------ inst/doc/two-table.html | 44 +++++++++++++++++++---------------- inst/doc/window-functions.html | 6 +++- tests/testthat/test-colwise-mutate.R | 6 +++- vignettes/aaa.R |only vignettes/aaa.html |only 12 files changed, 88 insertions(+), 54 deletions(-)
Title: Maximum Likelihood Analysis of Circular Data
Description: A series of wrapper functions to
implement the 10 maximum likelihood models of animal orientation
described by Schnute and Groot (1992) <DOI:10.1016/S0003-3472(05)80068-5>. The
functions also include the ability to use different optimizer
methods and calculate various model selection metrics (i.e., AIC,
AICc, BIC). The ability to perform variants of the Hermans-Rasson test and
Pycke test is also included as described in Landler et al. (2019)
<DOI:10.1186/s12898-019-0246-8>.
Author: Robert Fitak [aut, cre],
Sönke Johnsen [aut]
Maintainer: Robert Fitak <rfitak9@gmail.com>
Diff between CircMLE versions 0.2.2 dated 2019-10-17 and 0.2.3 dated 2020-01-31
DESCRIPTION | 14 ++++++++------ MD5 | 18 +++++++++++------- NAMESPACE | 2 ++ R/HR_test.r |only R/Pycke.r |only R/check_data.r | 10 +++++----- R/circ_mle.r | 2 +- README.md | 9 ++++++++- inst/CITATION | 20 +++++++++++++++++++- man/HR_test.Rd |only man/circ_mle.Rd | 14 +++++++++++--- man/pycke_test.Rd |only 12 files changed, 65 insertions(+), 24 deletions(-)
Title: Single and Multi-Objective Optimization Test Functions
Description: Provides generators for a high number of both single- and multi-
objective test functions which are frequently used for the benchmarking of
(numerical) optimization algorithms. Moreover, it offers a set of convenient
functions to generate, plot and work with objective functions.
Author: Jakob Bossek [aut, cre],
Pascal Kerschke [ctb]
Maintainer: ORPHANED
Diff between smoof versions 1.6.0 dated 2020-01-16 and 1.6.0.1 dated 2020-01-31
DESCRIPTION | 11 +++++++---- MD5 | 4 ++-- src/mof.wfg.cpp | 2 +- 3 files changed, 10 insertions(+), 7 deletions(-)
Title: Lasso, Group Lasso, and Sparse-Group Lasso for Mixed Models
Description: Proximal gradient descent solver for the operators lasso, group
lasso, and sparse-group lasso. The implementation involves backtracking line
search and warm starts. Input data needs to be clustered/grouped for the
(sparse-)group lasso before calling these algorithms.
Author: Jan Klosa [aut, cre],
Noah Simon [ths],
Dörte Wittenburg [ths]
Maintainer: Jan Klosa <klosa@fbn-dummerstorf.de>
Diff between seagull versions 1.0.4 dated 2020-01-27 and 1.0.5 dated 2020-01-31
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- NEWS.md | 6 ++++++ R/seagull.R | 5 +++-- inst/doc/seagull.pdf |binary man/seagull.Rd | 5 +++-- 6 files changed, 21 insertions(+), 13 deletions(-)
Title: Machine Learning for S.E.O
Description: Measures different aspects of page content, structure and performance for SEO (Search Engine Optimization).
Aspects covered include HTML tags used in SEO, duplicate and near-duplicate content, structured data, on-site linking structure and popularity transfer, and many other amazing things.
This package can be used to generate a real, full SEO audit report, which serves to detect errors or inefficiencies on a page that can be corrected in order to optimise its performance on search engines.
Author: Vincent Terrasi [aut, cre],
OnCrawl [cph, fnd]
Maintainer: Vincent Terrasi <vincent@oncrawl.com>
Diff between oncrawlR versions 0.1.8 dated 2019-11-18 and 0.2.0 dated 2020-01-31
DESCRIPTION | 8 ++--- MD5 | 12 ++++---- NAMESPACE | 1 R/listLogs.R | 1 R/listPages.R | 68 +++++++++++++++++++++++++++++++++++++++++++++++ README.md | 33 ++++++++++++++++++++++ man/getPageFieldsLogs.Rd |only man/listPagesAggs.Rd |only 8 files changed, 113 insertions(+), 10 deletions(-)
Title: Estimation and Inference Methods for Counterfactual Analysis
Description: Implements the estimation and inference methods for counterfactual analysis described in Chernozhukov, Fernandez-Val and Melly (2013) <DOI:10.3982/ECTA10582> "Inference on Counterfactual Distributions," Econometrica, 81(6). The counterfactual distributions considered are the result of changing either the marginal distribution of covariates related to the outcome variable of interest, or the conditional distribution of the outcome given the covariates. They can be applied to estimate quantile treatment effects and wage decompositions.
Author: Mingli Chen, Victor Chernozhukov, Ivan Fernandez-Val, Blaise Melly
Maintainer: Ivan Fernandez-Val <ivanf@bu.edu>
Diff between Counterfactual versions 1.1 dated 2017-07-19 and 1.2 dated 2020-01-31
DESCRIPTION | 10 MD5 | 16 R/counterfactual.r | 2557 +++++++++++++++++++++++-------------------------- build/vignette.rds |binary inst/doc/vignette.R | 38 inst/doc/vignette.Rnw | 69 - inst/doc/vignette.pdf |binary man/counterfactual.Rd | 10 vignettes/vignette.Rnw | 69 - 9 files changed, 1313 insertions(+), 1456 deletions(-)
More information about Counterfactual at CRAN
Permanent link
Title: Quantile G-Computation
Description: G-computation for a set of time-fixed exposures
with quantile-based basis functions, possibly under linearity and
homogeneity assumptions. This approach estimates a regression line
corresponding to the expected change in the outcome (on the link
basis) given a simultaneous increase in the quantile-based category
for all exposures. Works with continuous, binary, and right-censored
time-to-event outcomes. Reference: Alexander P. Keil, Jessie P.
Buckley, Katie M. OBrien, Kelly K. Ferguson, Shanshan Zhao, and
Alexandra J. White (2019) A quantile-based g-computation approach to
addressing the effects of exposure mixtures; <arXiv:1902.04200>
[stat.ME].
Author: Alexander Keil [aut, cre]
Maintainer: Alexander Keil <akeil@unc.edu>
Diff between qgcomp versions 2.0.0 dated 2020-01-16 and 2.1.2 dated 2020-01-31
DESCRIPTION | 15 MD5 | 71 ++-- NAMESPACE | 14 NEWS.md | 11 R/base.R | 434 +++++++++++++++++++------- R/base_surv.R | 46 +- R/base_zi.R | 698 +++++++++++++++++++++++++----------------- R/data.R | 4 R/utility.R | 12 README.md | 125 ++++--- inst/doc/qgcomp-vignette.R | 15 inst/doc/qgcomp-vignette.Rmd | 56 ++- inst/doc/qgcomp-vignette.html | 290 +++++++++-------- inst/fig/res1.png |binary inst/fig/res2.png |binary inst/fig/res4.png |binary inst/fig/res5.png |binary man/checknames.Rd | 2 man/coxmsm.fit.Rd | 5 man/metals.Rd | 8 man/modelbound.boot.Rd |only man/msm.fit.Rd | 7 man/msm.predict.Rd | 2 man/plot.qgcompfit.Rd | 4 man/pointwisebound.boot.Rd |only man/predict.qgcompfit.Rd | 4 man/qgcomp.Rd | 12 man/qgcomp.boot.Rd | 17 - man/qgcomp.cox.boot.Rd | 12 man/qgcomp.cox.noboot.Rd | 6 man/qgcomp.noboot.Rd | 15 man/qgcomp.zi.boot.Rd |only man/qgcomp.zi.noboot.Rd | 18 - man/quantize.Rd | 23 + man/se_comb.Rd | 2 man/zimsm.fit.Rd |only man/zimsm.fit.control.Rd |only tests/test_zi.R | 9 vignettes/qgcomp-vignette.Rmd | 56 ++- 39 files changed, 1253 insertions(+), 740 deletions(-)
Title: POSIX System Utilities
Description: Bindings to system utilities found in most Unix systems such as
POSIX functions which are not part of the Standard C Library.
Author: Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>)
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between unix versions 1.5 dated 2019-02-24 and 1.5.1 dated 2020-01-31
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- NEWS | 3 +++ R/fork.R | 5 +---- configure | 4 ++-- man/eval_fork.Rd | 4 ---- 6 files changed, 14 insertions(+), 18 deletions(-)
Title: Bindings to AppArmor and Security Related Linux Tools
Description: Bindings to kernel methods for enforcing security restrictions.
AppArmor can apply mandatory access control (MAC) policies on a given task
(process) via security profiles with detailed ACL definitions. In addition
this package implements bindings for setting process resource limits (rlimit),
uid, gid, affinity and priority. The high level R function 'eval.secure'
builds on these methods to perform dynamic sandboxing: it evaluates a single
R expression within a temporary fork which acts as a sandbox by enforcing
fine grained restrictions without affecting the main R process. A portable
version of this function is now available in the 'unix' package.
Author: Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>)
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between RAppArmor versions 3.2 dated 2019-03-16 and 3.2.1 dated 2020-01-31
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- NEWS | 3 +++ build/vignette.rds |binary configure | 4 ++-- 5 files changed, 12 insertions(+), 9 deletions(-)
Title: Bindings to Selected 'liblwgeom' Functions for Simple Features
Description: Access to selected functions found in 'liblwgeom' <https://github.com/postgis/postgis/tree/master/liblwgeom>, the light-weight geometry library used by 'PostGIS' <http://postgis.net/>.
Author: Edzer Pebesma [aut, cre] (<https://orcid.org/0000-0001-8049-7069>),
Colin Rundel [ctb],
Andy Teucher [ctb],
liblwgeom developers [cph]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between lwgeom versions 0.2-0 dated 2020-01-31 and 0.2-1 dated 2020-01-31
DESCRIPTION | 6 +++--- MD5 | 16 ++++++++-------- NAMESPACE | 1 + NEWS.md | 4 ++++ configure | 7 ++++++- configure.ac | 7 ++++++- man/valid.Rd | 3 +++ src/lwgeom.cpp | 4 ++-- src/proj.cpp | 2 +- 9 files changed, 34 insertions(+), 16 deletions(-)
Title: Gliding Box Lacunarity and Other Metrics for 2D Random Closed
Sets
Description: Functions for estimating the gliding box
lacunarity (GBL), covariance, and pair-correlation of a random closed
set (RACS) in 2D from a binary coverage map (e.g. presence-absence
land cover maps). Contains a number of newly-developed
covariance-based estimators of GBL (Hingee et al., 2019)
<doi:10.1007/s13253-019-00351-9> and balanced estimators, proposed by
Picka (2000) <http://www.jstor.org/stable/1428408>, for covariance,
centred covariance, and pair-correlation. Also contains methods for
estimating contagion-like properties of RACS and simulating 2D Boolean
models. Binary coverage maps are usually represented as raster images
with pixel values of TRUE, FALSE or NA, with NA representing
unobserved pixels. A demo for extracting such a binary map from a
geospatial data format is provided. Binary maps may also be
represented using polygonal sets as the foreground, however for most
computations such maps are converted into raster images. The package
is based on research conducted during the author's PhD studies.
Author: Kassel Liam Hingee
Maintainer: Kassel Liam Hingee <kassel.hingee@gmail.com>
Diff between lacunaritycovariance versions 1.0-8 dated 2019-07-24 and 1.0-13 dated 2020-01-31
DESCRIPTION | 26 +++++++++++++------------- MD5 | 26 +++++++++++++------------- NAMESPACE | 1 - NEWS | 10 ++++++++++ R/gbl.R | 15 +++++++-------- R/gblemp.R | 1 - R/gblg.R | 6 +++--- R/secondorderprops.R | 8 ++++---- README.md | 4 ++-- build/partial.rdb |binary inst/doc/estimate_RACS_properties.pdf |binary man/gbl.Rd | 6 +++--- tests/testthat/test-covar.R | 4 ++-- tests/testthat/test-rbdr.R | 2 +- 14 files changed, 58 insertions(+), 51 deletions(-)
More information about lacunaritycovariance at CRAN
Permanent link
Title: Distance Sampling Detection Function and Abundance Estimation
Description: A simple way of fitting detection functions to distance sampling
data for both line and point transects. Adjustment term selection, left and
right truncation as well as monotonicity constraints and binning are
supported. Abundance and density estimates can also be calculated (via a
Horvitz-Thompson-like estimator) if survey area information is provided.
Author: David Lawrence Miller
Maintainer: Laura Marshall <lhm@st-andrews.ac.uk>
Diff between Distance versions 0.9.8 dated 2019-05-01 and 1.0.0 dated 2020-01-31
Distance-0.9.8/Distance/R/amakihi.R |only Distance-1.0.0/Distance/DESCRIPTION | 12 +- Distance-1.0.0/Distance/MD5 | 87 ++++++++++++--- Distance-1.0.0/Distance/NAMESPACE | 41 +++++++ Distance-1.0.0/Distance/NEWS | 7 + Distance-1.0.0/Distance/R/Distance-package.R | 2 Distance-1.0.0/Distance/R/ER_var_f.R |only Distance-1.0.0/Distance/R/bootdht.R |only Distance-1.0.0/Distance/R/bootdht_Nhat_summarize.R |only Distance-1.0.0/Distance/R/compute_df.R |only Distance-1.0.0/Distance/R/convert_units.R |only Distance-1.0.0/Distance/R/covn.R |only Distance-1.0.0/Distance/R/create.bins.R | 14 -- Distance-1.0.0/Distance/R/dht2.R |only Distance-1.0.0/Distance/R/dht2_checkdata.R |only Distance-1.0.0/Distance/R/ds.R | 27 +++- Distance-1.0.0/Distance/R/dsdata.R |only Distance-1.0.0/Distance/R/print.dht_result.R |only Distance-1.0.0/Distance/R/print.summary.dht_bootstrap.R |only Distance-1.0.0/Distance/R/safetruncate.R |only Distance-1.0.0/Distance/R/summary.dht_bootstrap.R |only Distance-1.0.0/Distance/R/unflatten.R |only Distance-1.0.0/Distance/R/units_table.R |only Distance-1.0.0/Distance/R/varNhat.R |only Distance-1.0.0/Distance/R/variance_contributions.R |only Distance-1.0.0/Distance/README.md | 6 - Distance-1.0.0/Distance/data/ClusterExercise.RData |only Distance-1.0.0/Distance/data/CueCountingExample.RData |only Distance-1.0.0/Distance/data/ETP_Dolphin.RData |only Distance-1.0.0/Distance/data/LTExercise.RData |only Distance-1.0.0/Distance/data/PTExercise.RData |only Distance-1.0.0/Distance/data/Savannah_sparrow_1980.RData |only Distance-1.0.0/Distance/data/Savannah_sparrow_1981.RData |only Distance-1.0.0/Distance/data/Stratify_example.RData |only Distance-1.0.0/Distance/data/Systematic_variance_1.RData |only Distance-1.0.0/Distance/data/Systematic_variance_2.RData |only Distance-1.0.0/Distance/data/amakihi.RData |binary Distance-1.0.0/Distance/data/capercaillie.RData |only Distance-1.0.0/Distance/data/ducknest.RData |only Distance-1.0.0/Distance/data/golftees.RData |only Distance-1.0.0/Distance/data/sikadeer.RData |only Distance-1.0.0/Distance/data/unimak.RData |only Distance-1.0.0/Distance/data/wren_5min.RData |only Distance-1.0.0/Distance/data/wren_cuecount.RData |only Distance-1.0.0/Distance/data/wren_lt.RData |only Distance-1.0.0/Distance/data/wren_snapshot.RData |only Distance-1.0.0/Distance/man/ClusterExercise.Rd |only Distance-1.0.0/Distance/man/CueCountingExample.Rd |only Distance-1.0.0/Distance/man/Distance-package.Rd | 2 Distance-1.0.0/Distance/man/ETP_Dolphin.Rd |only Distance-1.0.0/Distance/man/LTExercise.Rd |only Distance-1.0.0/Distance/man/PTExercise.Rd |only Distance-1.0.0/Distance/man/Savannah_sparrow_1980.Rd |only Distance-1.0.0/Distance/man/Stratify_example.Rd |only Distance-1.0.0/Distance/man/Systematic_variance_1.Rd |only Distance-1.0.0/Distance/man/amakihi.Rd | 38 ++++-- Distance-1.0.0/Distance/man/bootdht.Rd |only Distance-1.0.0/Distance/man/bootdht_Nhat_summarize.Rd |only Distance-1.0.0/Distance/man/capercaillie.Rd |only Distance-1.0.0/Distance/man/checkdata.Rd | 9 + Distance-1.0.0/Distance/man/convert_units.Rd |only Distance-1.0.0/Distance/man/dht2.Rd |only Distance-1.0.0/Distance/man/ds.Rd | 37 ++++-- Distance-1.0.0/Distance/man/ducknest.Rd |only Distance-1.0.0/Distance/man/gof_ds.Rd | 3 Distance-1.0.0/Distance/man/golftees.Rd |only Distance-1.0.0/Distance/man/print.dht_result.Rd |only Distance-1.0.0/Distance/man/sikadeer.Rd |only Distance-1.0.0/Distance/man/summarize_ds_models.Rd | 3 Distance-1.0.0/Distance/man/summary.dht_bootstrap.Rd |only Distance-1.0.0/Distance/man/unflatten.Rd |only Distance-1.0.0/Distance/man/unimak.Rd |only Distance-1.0.0/Distance/man/units_table.Rd |only Distance-1.0.0/Distance/man/wren.Rd |only 74 files changed, 218 insertions(+), 70 deletions(-)
Title: Google's Compact Language Detector 3
Description: Google's Compact Language Detector 3 is a neural network model for language
identification and the successor of 'cld2' (available from CRAN). The algorithm is still
experimental and takes a novel approach to language detection with different properties
and outcomes. It can be useful to combine this with the Bayesian classifier results
from 'cld2'. See <https://github.com/google/cld3#readme> for more information.
Author: Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>),
Google Inc [cph] (CLD3 C++ library)
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between cld3 versions 1.2 dated 2019-07-18 and 1.3 dated 2020-01-31
DESCRIPTION | 13 ++++++------- MD5 | 8 ++++---- NEWS | 3 +++ cleanup | 4 ++-- configure | 18 ++++++++++-------- 5 files changed, 25 insertions(+), 21 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-11-15 1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-01-11 3.2
2017-09-24 3.1
2017-05-29 3.0
2015-07-27 2.6
2015-02-05 2.4
2014-08-09 2.3-1
2014-06-20 2.3
2013-06-11 2.1-1
2012-12-27 1.1
2012-06-19 1.0-1
2010-01-03 0.6-2
2008-12-06 0.6-1
2008-11-26 0.6
2008-06-26 0.5-10
2007-10-27 0.5-9
2007-08-25 0.5-8
2007-05-29 0.5-7
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-08-10 2.0.1
2017-09-24 2.0
2015-07-27 1.6
2015-05-21 1.5-2
2015-02-05 1.5
2013-06-12 1.3-2
2013-03-29 1.2.1
2012-12-27 1.2
2012-09-25 1.1
2012-01-07 1.0
2010-05-30 0.7
2010-01-14 0.6
2009-06-25 0.5-1
2009-04-27 0.4
2008-06-26 0.3-12
2007-10-27 0.3-11
2007-08-25 0.3-10
2007-08-14 0.3-9
2007-05-29 0.3-8
Title: Probabilistic Supervised Learning for 'mlr3'
Description: Provides extensions for probabilistic supervised
learning for 'mlr3'. This includes extending the regression task to
probabilistic and interval regression, adding a survival task, and
other specialized models, predictions, and measures.
Author: Raphael Sonabend [aut, cre] (<https://orcid.org/0000-0001-9225-4654>),
Franz Kiraly [aut],
Michel Lang [aut] (<https://orcid.org/0000-0001-9754-0393>),
Andreas Bender [ctb] (<https://orcid.org/0000-0001-5628-8611>)
Maintainer: Raphael Sonabend <raphael.sonabend.15@ucl.ac.uk>
Diff between mlr3proba versions 0.1.1 dated 2020-01-08 and 0.1.2 dated 2020-01-31
mlr3proba-0.1.1/mlr3proba/tests/testthat/Rplots.pdf |only mlr3proba-0.1.2/mlr3proba/DESCRIPTION | 12 +-- mlr3proba-0.1.2/mlr3proba/MD5 | 33 ++++------ mlr3proba-0.1.2/mlr3proba/NEWS.md | 6 + mlr3proba-0.1.2/mlr3proba/R/PipeOpCrankCompositor.R | 14 +--- mlr3proba-0.1.2/mlr3proba/R/crankcompositor.R | 4 - mlr3proba-0.1.2/mlr3proba/R/distrcompositor.R | 2 mlr3proba-0.1.2/mlr3proba/R/predict_flexsurvreg.R | 16 ++-- mlr3proba-0.1.2/mlr3proba/build/partial.rdb |binary mlr3proba-0.1.2/mlr3proba/build/vignette.rds |binary mlr3proba-0.1.2/mlr3proba/inst/doc/survival.R | 2 mlr3proba-0.1.2/mlr3proba/inst/doc/survival.Rmd | 2 mlr3proba-0.1.2/mlr3proba/inst/doc/survival.html | 2 mlr3proba-0.1.2/mlr3proba/man/PipeOpCrankCompositor.Rd | 8 +- mlr3proba-0.1.2/mlr3proba/man/crankcompositor.Rd | 8 +- mlr3proba-0.1.2/mlr3proba/man/distrcompositor.Rd | 2 mlr3proba-0.1.2/mlr3proba/tests/testthat/test_pipeop_crankcompositor.R | 2 mlr3proba-0.1.2/mlr3proba/vignettes/survival.Rmd | 2 18 files changed, 63 insertions(+), 52 deletions(-)
Title: R Bindings for 'ZeroMQ'
Description: Interface to the 'ZeroMQ' lightweight messaging kernel (see <http://www.zeromq.org/> for more information).
Author: Whit Armstrong [aut],
Michael Schubert [ctb],
Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>)
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between rzmq versions 0.9.6 dated 2019-03-01 and 0.9.7 dated 2020-01-31
DESCRIPTION | 14 ++++++++------ MD5 | 12 ++++++------ NEWS | 3 +++ README.md | 16 +++++++++------- cleanup | 2 +- configure | 16 +++++++++------- src/Makevars.win | 2 +- 7 files changed, 37 insertions(+), 28 deletions(-)
Title: Ordered Random Forests
Description: An implementation of the Ordered Forest estimator as developed
in Lechner & Okasa (2019) <arXiv:1907.02436>. The Ordered Forest flexibly
estimates the conditional probabilities of models with ordered categorical
outcomes (so-called ordered choice models). Additionally to common machine
learning algorithms the 'orf' package provides functions for estimating
marginal effects as well as statistical inference thereof and thus provides
similar output as in standard econometric models for ordered choice. The
core forest algorithm relies on the fast C++ forest implementation from
the 'ranger' package (Wright & Ziegler, 2017) <arXiv:1508.04409>.
Author: Gabriel Okasa [aut, cre], Michael Lechner [ctb]
Maintainer: Gabriel Okasa <gabriel.okasa@unisg.ch>
Diff between orf versions 0.1.2 dated 2019-11-30 and 0.1.3 dated 2020-01-31
DESCRIPTION | 10 - MD5 | 37 ++-- NEWS.md | 6 R/margins.R | 56 +++--- R/orf_dev.R | 20 +- R/orf_user.R | 85 ++++----- README.md |only build/vignette.rds |binary inst/CITATION | 8 inst/doc/orf_vignette.R | 23 +- inst/doc/orf_vignette.Rmd | 19 +- inst/doc/orf_vignette.html | 369 +++++++++++++++++++++--------------------- man/get_orf_variance.Rd | 9 - man/margins.Rd | 3 man/margins.orf.Rd | 3 man/orf.Rd | 16 + man/predict.orf.Rd | 3 tests/testthat/test_margins.R | 14 + tests/testthat/test_orf.R | 22 ++ vignettes/orf_vignette.Rmd | 19 +- 20 files changed, 408 insertions(+), 314 deletions(-)
Title: Toolbox for Pseudo and Quasi Random Number Generation and Random
Generator Tests
Description: Provides (1) pseudo random generators - general linear congruential generators,
multiple recursive generators and generalized feedback shift register (SF-Mersenne Twister
algorithm and WELL generators); (2) quasi random generators - the Torus algorithm, the
Sobol sequence, the Halton sequence (including the Van der Corput sequence) and (3) some
generator tests - the gap test, the serial test, the poker test.
See e.g. Gentle (2003) <doi:10.1007/b97336>. The package can be provided
without the rngWELL dependency on demand.
Take a look at the Distribution task view of types and tests of random number generators.
Version in Memoriam of Diethelm and Barbara Wuertz.
Author: R port by Yohan Chalabi, Christophe Dutang, Petr Savicky and Diethelm Wuertz with some underlying C codes of (i) the SFMT algorithm from M. Matsumoto and M. Saito, (ii) the Knuth-TAOCP RNG from D. Knuth.
Maintainer: Christophe Dutang <christophe.dutang@ensimag.fr>
Diff between randtoolbox versions 1.30.0 dated 2019-04-21 and 1.30.1 dated 2020-01-31
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- src/init.c | 2 ++ src/runifInterface.h | 3 +++ src/wellrng.h | 6 ++++++ 5 files changed, 18 insertions(+), 7 deletions(-)
Title: Phase I/II Adaptive Dose-Finding Design for MTA
Description: Phase I/II adaptive dose-finding design for single-agent
Molecularly Targeted Agent (MTA), according to the paper "Phase
I/II Dose-Finding Design for Molecularly Targeted Agent: Plateau
Determination using Adaptive Randomization", Riviere Marie-Karelle et
al. (2016) <doi:10.1177/0962280216631763>.
Author: Marie-Karelle Riviere and Jacques-Henri Jourdan
Maintainer: Jacques-Henri Jourdan <jacques-henri.jourdan@normalesup.org>
Diff between dfmta versions 1.7-0 dated 2018-05-24 and 1.7-1 dated 2020-01-31
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- build/partial.rdb |binary configure | 19 +++++++++---------- configure.ac | 1 - 5 files changed, 17 insertions(+), 19 deletions(-)
Title: Ensemble Learning Algorithms Based on Support Vector Machines
Description: Three ensemble learning algorithms based on support vector machines.
They all train support vector machines on subset of data and combine the result.
Author: Tong He <hetong007@gmail.com>, Aydin Demircioglu <aydin.demircioglu@ini.ruhr-uni-bochum.de>
Maintainer: Tong He <hetong007@gmail.com>
Diff between SwarmSVM versions 0.1-5 dated 2019-01-25 and 0.1-6 dated 2020-01-31
DESCRIPTION | 10 MD5 | 32 build/vignette.rds |binary inst/doc/SwarmSVM.R | 26 inst/doc/SwarmSVM.html | 7141 +++++++++++++++++++++-------------------- man/SwarmSVM.Rd | 1 man/alphasvm.Rd | 50 man/clusterSVM.Rd | 27 man/dcSVM.Rd | 25 man/gater.Rd | 13 man/gaterSVM.Rd | 20 man/plot.alphasvm.Rd | 15 man/predict.alphasvm.Rd | 10 man/predict.clusterSVM.Rd | 3 man/write.alphasvm.Rd | 8 src/svm.cpp | 212 + tests/testthat/test_alphasvm.R | 4 17 files changed, 4020 insertions(+), 3577 deletions(-)
Title: Sampling Design for Spatially Explicit Capture-Recapture
Description: Tools for designing spatially explicit capture-recapture studies of animal populations. This is primarily a simulation manager for package 'secr'. Extensions in version 2.5.0 include costing and evaluation of detector spacing.
Author: Murray Efford
Maintainer: Murray Efford <murray.efford@otago.ac.nz>
Diff between secrdesign versions 2.5.7 dated 2019-02-04 and 2.5.10 dated 2020-01-31
DESCRIPTION | 8 ++++---- MD5 | 24 ++++++++++++------------ NEWS | 25 +++++++++++++++++++++++++ R/Lambda.R | 1 - R/methods.R | 19 ++++++++++++------- R/optimalSpacing.R | 41 +++++++++++++++++++++++++++++++++++------ R/power.R | 40 ++++++++++++++++++++++++---------------- R/run.scenarios.R | 37 +++++++++++++++++++++++++++++-------- R/scenarioSummary.R | 5 +---- man/optimalSpacing.Rd | 2 ++ man/plot.optimalSpacing.Rd | 2 +- man/run.scenarios.Rd | 9 ++++++--- man/secrdesign-package.Rd | 4 ++-- 13 files changed, 153 insertions(+), 64 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-29 1.0.0
2019-04-09 0.0.3
2019-02-12 0.0.2
2019-01-11 0.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-05-09 0.3.0
2016-09-24 0.2.0
2016-07-15 0.1.1
2016-05-12 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-07-07 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-01-08 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-01-03 1.7.5
2018-09-18 1.7.4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-02-13 0.1.2
2019-01-17 0.1.1
2018-10-14 0.1.0
Title: Gentle Language Installer for R User
Description: Provides install functions of other languages
such as 'java', 'python' for windows and macos.
Author: Chanyub Park [aut, cre] (<https://orcid.org/0000-0001-6474-2570>)
Maintainer: Chanyub Park <mrchypark@gmail.com>
Diff between multilinguer versions 0.0.3 dated 2019-12-30 and 0.0.4 dated 2020-01-31
DESCRIPTION | 6 +- MD5 | 24 ++++++---- NAMESPACE | 47 ++++++++++---------- NEWS.md |only R/download_corretto.R | 47 +++++--------------- R/download_rust.R |only R/install.R | 112 ++++++++++++++++++++++++------------------------- README.md | 74 ++++++++++++++++---------------- man/crt_download.Rd | 2 man/crt_unc.Rd | 2 man/install_java.Rd | 2 man/java_available.Rd | 2 man/java_home_check.Rd | 2 man/rs_download.Rd |only man/rustup.Rd |only 15 files changed, 153 insertions(+), 167 deletions(-)
Title: Mining Frequent Sequences
Description: Add-on for arules to handle and mine frequent sequences.
Provides interfaces to the C++ implementation of cSPADE by
Mohammed J. Zaki.
Author: Christian Buchta and Michael Hahsler, with contributions from
Daniel Diaz
Maintainer: Christian Buchta <christian.buchta@wu.ac.at>
Diff between arulesSequences versions 0.2-22 dated 2019-04-16 and 0.2-23 dated 2020-01-31
CHANGELOG | 6 ++++ DESCRIPTION | 6 ++-- MD5 | 20 +++++++------- R/03rules.R | 6 ++-- data/zaki.rda |binary tests/idlists.R | 2 + tests/idlists.Rout.save | 10 ++++--- tests/ptree.R | 26 ++++++++++++++----- tests/ptree.Rout.save | 65 +++++++++++++++++++++++++++++------------------- tests/zaki.R | 7 +++++ tests/zaki.Rout.save | 29 +++++++++++++-------- 11 files changed, 115 insertions(+), 62 deletions(-)
More information about arulesSequences at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-08-13 0.8.3
2017-10-22 0.8.2
2017-10-06 0.8.1
2017-01-10 0.8.0
2016-11-29 0.7.4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-18 1.5.2
2019-05-15 1.3.2
2018-11-04 1.2.0
2018-09-25 1.1.0
2018-05-11 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-12-16 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-07-21 0.2.4
Title: World Population Prospects 2019
Description: Provides data from the United Nation's World Population Prospects 2019.
Author: United Nations Population Division
Maintainer: Hana Sevcikova <hanas@uw.edu>
Diff between wpp2019 versions 1.1-0 dated 2019-10-04 and 1.1-1 dated 2020-01-31
ChangeLog | 6 ++++++ DESCRIPTION | 10 +++++----- MD5 | 14 +++++++------- NAMESPACE | 1 + man/UNlocations.Rd | 2 +- man/e0.Rd | 2 +- man/tfr.Rd | 2 +- man/wpp2019-package.Rd | 4 ++-- 8 files changed, 24 insertions(+), 17 deletions(-)
Title: Tidy Temporal Data Frames and Tools
Description: Provides a 'tbl_ts' class (the 'tsibble') for
temporal data in an data- and model-oriented format. The 'tsibble' provides
tools to easily manipulate and analyse temporal data, such as filling in
time gaps and aggregating over calendar periods.
Author: Earo Wang [aut, cre] (<https://orcid.org/0000-0001-6448-5260>),
Di Cook [aut, ths] (<https://orcid.org/0000-0002-3813-7155>),
Rob Hyndman [aut, ths] (<https://orcid.org/0000-0002-2140-5352>),
Mitchell O'Hara-Wild [aut] (<https://orcid.org/0000-0001-6729-7695>)
Maintainer: Earo Wang <earo.wang@gmail.com>
Diff between tsibble versions 0.8.5 dated 2019-11-03 and 0.8.6 dated 2020-01-31
DESCRIPTION | 10 ++-- MD5 | 94 ++++++++++++++++++++++---------------------- NEWS.md | 4 + R/slide.R | 6 +- R/stretch.R | 6 +- R/tile.R | 6 +- build/tsibble.pdf |binary inst/CITATION | 10 ++-- inst/WORDLIST | 1 inst/doc/faq.R | 16 +++---- inst/doc/faq.html | 11 +---- inst/doc/implicit-na.R | 14 +++--- inst/doc/implicit-na.html | 55 ++++++++++++------------- inst/doc/intro-tsibble.R | 12 ++--- inst/doc/intro-tsibble.html | 33 +++++++-------- inst/doc/window.R | 14 +++--- inst/doc/window.Rmd | 2 inst/doc/window.html | 25 +++++------ man/as-tibble.Rd | 7 +-- man/as-tsibble.Rd | 25 ++++++++--- man/as.ts.tbl_ts.Rd | 3 - man/build_tsibble.Rd | 14 +++++- man/build_tsibble_meta.Rd | 10 +++- man/count_gaps.Rd | 6 +- man/difference.Rd | 3 - man/fill_gaps.Rd | 6 +- man/future-slide.Rd | 6 +- man/future-stretch.Rd | 6 +- man/future-tile.Rd | 6 +- man/group_by_key.Rd | 2 man/has_gaps.Rd | 6 +- man/partial-slider.Rd | 20 +++++++-- man/scan_gaps.Rd | 6 +- man/slide.Rd | 49 ++++++++++++++++++---- man/slide2.Rd | 88 ++++++++++++++++++++++++++++++++++------- man/slide_tsibble.Rd | 5 +- man/stretch.Rd | 34 +++++++++++---- man/stretch2.Rd | 42 +++++++++++++------ man/stretch_tsibble.Rd | 5 +- man/tile.Rd | 5 +- man/tile2.Rd | 5 +- man/tile_tsibble.Rd | 5 +- man/tsibble-package.Rd | 14 +++--- man/tsibble-tidyverse.Rd | 3 + man/tsibble.Rd | 4 - man/update_tsibble.Rd | 10 +++- tests/testthat/test-gaps.R | 4 - vignettes/window.Rmd | 2 48 files changed, 444 insertions(+), 276 deletions(-)
Title: Obtain and Analyze Daily Rainfall Data from the USA Climate
Prediction Center (CPC)
Description: The Climate Prediction Center's (CPC) rainfall data for the
world (1979 to present, 50 km resolution) and the USA (1948 to
present, 25 km resolution), is one of the few high quality, long
term, observation based, daily rainfall products available for free.
Although raw data is available at CPC's ftp site, obtaining,
processing and visualizing the data is not straightforward. There are
thousands of files, and file formats and file extensions have been
changing over time. This package provides functionality to download,
process and visualize over 40 years of global rainfall data and over
70 years of USA rainfall data from CPC.
Author: Gopi Goteti <my.ration.shop@gmail.com>
Maintainer: Gopi Goteti <my.ration.shop@gmail.com>
Diff between raincpc versions 0.4 dated 2014-08-29 and 1.1.0 dated 2020-01-31
raincpc-0.4/raincpc/R/cpc_get_rawdata.r |only raincpc-0.4/raincpc/R/cpc_read_rawdata.r |only raincpc-0.4/raincpc/R/raincpc-package.r |only raincpc-1.1.0/raincpc/DESCRIPTION | 31 ++-- raincpc-1.1.0/raincpc/MD5 | 38 +++-- raincpc-1.1.0/raincpc/NAMESPACE | 15 +- raincpc-1.1.0/raincpc/NEWS | 20 +- raincpc-1.1.0/raincpc/R/cpc_get_rawdata.R |only raincpc-1.1.0/raincpc/R/cpc_read_rawdata.R |only raincpc-1.1.0/raincpc/R/raincpc-package.R |only raincpc-1.1.0/raincpc/R/sdm_as_asc.R |only raincpc-1.1.0/raincpc/R/sdm_asc_from_raster.R |only raincpc-1.1.0/raincpc/R/sdm_extract_data.R |only raincpc-1.1.0/raincpc/R/sdm_getXYcoords.R |only raincpc-1.1.0/raincpc/R/sdm_raster_from_asc.R |only raincpc-1.1.0/raincpc/build/vignette.rds |binary raincpc-1.1.0/raincpc/inst/doc/raincpc_demo.R | 77 ++++------- raincpc-1.1.0/raincpc/inst/doc/raincpc_demo.Rmd | 80 +++++------ raincpc-1.1.0/raincpc/inst/doc/raincpc_demo.html | 158 ++++++++++------------- raincpc-1.1.0/raincpc/man/cpc_get_rawdata.Rd | 82 +++++------ raincpc-1.1.0/raincpc/man/cpc_read_rawdata.Rd | 110 ++++++++-------- raincpc-1.1.0/raincpc/man/raincpc.Rd | 57 ++++---- raincpc-1.1.0/raincpc/man/sdm_as_asc.Rd |only raincpc-1.1.0/raincpc/man/sdm_asc_from_raster.Rd |only raincpc-1.1.0/raincpc/man/sdm_extract_data.Rd |only raincpc-1.1.0/raincpc/man/sdm_getXYcoords.Rd |only raincpc-1.1.0/raincpc/man/sdm_raster_from_asc.Rd |only raincpc-1.1.0/raincpc/vignettes/raincpc_demo.Rmd | 80 +++++------ 28 files changed, 361 insertions(+), 387 deletions(-)
Title: Bindings to Selected 'liblwgeom' Functions for Simple Features
Description: Access to selected functions found in 'liblwgeom' <https://github.com/postgis/postgis/tree/master/liblwgeom>, the light-weight geometry library used by 'PostGIS' <http://postgis.net/>.
Author: Edzer Pebesma [aut, cre] (<https://orcid.org/0000-0001-8049-7069>),
Colin Rundel [ctb],
Andy Teucher [ctb],
liblwgeom developers [cph]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between lwgeom versions 0.1-7 dated 2019-05-06 and 0.2-0 dated 2020-01-31
lwgeom-0.1-7/lwgeom/src/liblwgeom/box2d.c |only lwgeom-0.1-7/lwgeom/src/liblwgeom/g_box.c |only lwgeom-0.1-7/lwgeom/src/liblwgeom/g_serialized.c |only lwgeom-0.1-7/lwgeom/src/liblwgeom/g_util.c |only lwgeom-0.1-7/lwgeom/src/liblwgeom/kmeans.c |only lwgeom-0.1-7/lwgeom/src/liblwgeom/kmeans.h |only lwgeom-0.1-7/lwgeom/src/liblwgeom/lwin_geojson.c |only lwgeom-0.1-7/lwgeom/src/liblwgeom/lwtree.c |only lwgeom-0.1-7/lwgeom/src/liblwgeom/lwtree.h |only lwgeom-0.2-0/lwgeom/DESCRIPTION | 10 lwgeom-0.2-0/lwgeom/MD5 | 228 - lwgeom-0.2-0/lwgeom/NEWS.md | 10 lwgeom-0.2-0/lwgeom/R/transform.R | 19 lwgeom-0.2-0/lwgeom/R/valid.R | 7 lwgeom-0.2-0/lwgeom/R/wkt.R | 2 lwgeom-0.2-0/lwgeom/cleanup | 2 lwgeom-0.2-0/lwgeom/configure | 312 - lwgeom-0.2-0/lwgeom/configure.ac | 217 - lwgeom-0.2-0/lwgeom/man/st_astext.Rd | 2 lwgeom-0.2-0/lwgeom/man/st_transform_proj.Rd | 4 lwgeom-0.2-0/lwgeom/src/Makevars.in | 115 lwgeom-0.2-0/lwgeom/src/Makevars.win | 116 lwgeom-0.2-0/lwgeom/src/liblwgeom/DIFFS |only lwgeom-0.2-0/lwgeom/src/liblwgeom/README.topo |only lwgeom-0.2-0/lwgeom/src/liblwgeom/TODO |only lwgeom-0.2-0/lwgeom/src/liblwgeom/bytebuffer.c | 212 - lwgeom-0.2-0/lwgeom/src/liblwgeom/bytebuffer.h | 21 lwgeom-0.2-0/lwgeom/src/liblwgeom/effectivearea.c | 36 lwgeom-0.2-0/lwgeom/src/liblwgeom/effectivearea.h | 6 lwgeom-0.2-0/lwgeom/src/liblwgeom/gbox.c |only lwgeom-0.2-0/lwgeom/src/liblwgeom/gserialized.c |only lwgeom-0.2-0/lwgeom/src/liblwgeom/gserialized.h |only lwgeom-0.2-0/lwgeom/src/liblwgeom/gserialized.txt |only lwgeom-0.2-0/lwgeom/src/liblwgeom/gserialized1.c |only lwgeom-0.2-0/lwgeom/src/liblwgeom/gserialized1.h |only lwgeom-0.2-0/lwgeom/src/liblwgeom/gserialized2.c |only lwgeom-0.2-0/lwgeom/src/liblwgeom/gserialized2.h |only lwgeom-0.2-0/lwgeom/src/liblwgeom/liblwgeom.h | 819 ++-- lwgeom-0.2-0/lwgeom/src/liblwgeom/liblwgeom.h.in |only lwgeom-0.2-0/lwgeom/src/liblwgeom/liblwgeom_internal.h | 102 lwgeom-0.2-0/lwgeom/src/liblwgeom/liblwgeom_topo.h | 176 lwgeom-0.2-0/lwgeom/src/liblwgeom/liblwgeom_topo_internal.h | 28 lwgeom-0.2-0/lwgeom/src/liblwgeom/lookup3.c |only lwgeom-0.2-0/lwgeom/src/liblwgeom/lwalgorithm.c | 81 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwboundingcircle.c | 1 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwchaikins.c |only lwgeom-0.2-0/lwgeom/src/liblwgeom/lwcircstring.c | 27 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwcollection.c | 165 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwcompound.c | 18 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwcurvepoly.c | 14 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeodetic.c | 475 +- lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeodetic.h | 11 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeodetic_tree.c | 150 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeodetic_tree.h | 10 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeom.c | 548 +-- lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeom_api.c | 152 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeom_debug.c | 18 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeom_geos.c | 2145 +++++------- lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeom_geos.h | 36 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeom_geos_clean.c | 601 +-- lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeom_geos_cluster.c | 11 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeom_geos_node.c | 2 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeom_geos_split.c | 38 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeom_median.c | 261 - lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeom_topo.c | 1488 +++----- lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeom_transform.c | 447 ++ lwgeom-0.2-0/lwgeom/src/liblwgeom/lwgeom_wrapx.c | 10 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwhomogenize.c | 55 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwin_encoded_polyline.c | 2 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwin_twkb.c | 19 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwin_wkb.c | 113 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwin_wkt.c | 37 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwin_wkt.h | 7 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwin_wkt_lex.c | 1340 ++++--- lwgeom-0.2-0/lwgeom/src/liblwgeom/lwin_wkt_lex.l |only lwgeom-0.2-0/lwgeom/src/liblwgeom/lwin_wkt_parse.c | 994 ++--- lwgeom-0.2-0/lwgeom/src/liblwgeom/lwin_wkt_parse.h | 38 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwin_wkt_parse.y |only lwgeom-0.2-0/lwgeom/src/liblwgeom/lwinline.h |only lwgeom-0.2-0/lwgeom/src/liblwgeom/lwiterator.c | 4 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwkmeans.c | 447 +- lwgeom-0.2-0/lwgeom/src/liblwgeom/lwline.c | 115 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwlinearreferencing.c | 912 ++--- lwgeom-0.2-0/lwgeom/src/liblwgeom/lwmline.c | 21 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwmpoint.c | 8 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwmpoly.c | 4 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwmval.c |only lwgeom-0.2-0/lwgeom/src/liblwgeom/lwout_encoded_polyline.c | 86 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwout_geojson.c | 198 - lwgeom-0.2-0/lwgeom/src/liblwgeom/lwout_gml.c | 148 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwout_kml.c | 34 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwout_svg.c | 98 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwout_twkb.c | 53 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwout_wkb.c | 80 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwout_wkt.c | 53 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwout_x3d.c | 753 +--- lwgeom-0.2-0/lwgeom/src/liblwgeom/lwout_x3d.h |only lwgeom-0.2-0/lwgeom/src/liblwgeom/lwpoint.c | 26 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwpoly.c | 114 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwprint.c | 75 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwpsurface.c | 12 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwrandom.c |only lwgeom-0.2-0/lwgeom/src/liblwgeom/lwrandom.h |only lwgeom-0.2-0/lwgeom/src/liblwgeom/lwspheroid.c | 22 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwstroke.c | 425 +- lwgeom-0.2-0/lwgeom/src/liblwgeom/lwtin.c | 12 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwtriangle.c | 21 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwunionfind.c | 1 lwgeom-0.2-0/lwgeom/src/liblwgeom/lwutil.c | 284 + lwgeom-0.2-0/lwgeom/src/liblwgeom/measures.c | 1751 ++++----- lwgeom-0.2-0/lwgeom/src/liblwgeom/measures.h | 17 lwgeom-0.2-0/lwgeom/src/liblwgeom/measures3d.c | 1413 ++++--- lwgeom-0.2-0/lwgeom/src/liblwgeom/measures3d.h | 59 lwgeom-0.2-0/lwgeom/src/liblwgeom/ptarray.c | 690 ++- lwgeom-0.2-0/lwgeom/src/liblwgeom/stringbuffer.c | 36 lwgeom-0.2-0/lwgeom/src/liblwgeom/stringbuffer.h | 36 lwgeom-0.2-0/lwgeom/src/liblwgeom/varint.c | 2 lwgeom-0.2-0/lwgeom/src/lwgeom.cpp | 28 lwgeom-0.2-0/lwgeom/src/postgis_config.h | 107 lwgeom-0.2-0/lwgeom/src/postgis_config.h.in |only lwgeom-0.2-0/lwgeom/src/postgis_config.win |only lwgeom-0.2-0/lwgeom/src/proj.cpp | 15 lwgeom-0.2-0/lwgeom/tests/azimuth.R | 2 lwgeom-0.2-0/lwgeom/tests/azimuth.Rout.save | 9 lwgeom-0.2-0/lwgeom/tests/dist.R | 12 lwgeom-0.2-0/lwgeom/tests/dist.Rout.save | 34 lwgeom-0.2-0/lwgeom/tests/perimeter.R | 2 lwgeom-0.2-0/lwgeom/tests/perimeter.Rout.save | 44 lwgeom-0.2-0/lwgeom/tests/testthat.Rout.save | 15 lwgeom-0.2-0/lwgeom/tests/testthat/test-as_text.R | 6 lwgeom-0.2-0/lwgeom/tests/testthat/test_lwgeom.R | 12 131 files changed, 10432 insertions(+), 9622 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-03-13 0.1.9
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-27 0.3.4
2020-01-12 0.3.3
2019-08-19 0.3.2
2019-07-13 0.3.1
2017-08-31 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-10-31 0.1.4
2019-04-24 0.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-16 0.99-20200115
2018-06-28 0.99-20180627
2017-10-06 0.99-20171005
2016-11-19 0.98-20161118
2015-03-05 0.98-20150304
2014-05-23 0.98-20140523
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-05-21 1.0.1
2019-05-16 1.0.0
Title: A Unified Framework for Random Forest Prediction Error
Estimation
Description: Estimates the conditional error distributions of random forest
predictions and common parameters of those distributions, including
conditional mean squared prediction errors, conditional biases, and
conditional quantiles, by out-of-bag weighting of out-of-bag prediction
errors as proposed by Lu and Hardin (2019+) <arXiv:1912.07435>.
This package is compatible with several existing packages that
implement random forests in R.
Author: Benjamin Lu and Johanna Hardin
Maintainer: Benjamin Lu <b.lu@berkeley.edu>
Diff between forestError versions 0.1.0 dated 2020-01-14 and 0.1.1 dated 2020-01-31
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- R/quantforesterror.R | 10 ++++++---- README.md | 14 ++++++++------ man/quantForestError.Rd | 2 ++ 5 files changed, 23 insertions(+), 17 deletions(-)