Title: Tools for Inference in the Presence of a Monotone Likelihood
Description: Proportional hazards estimation in the presence of a partially monotone likelihood has difficulties, in that finite estimators do not exist. These difficulties are related to those arising from logistic and multinomial regression. References for methods are given in the separate function documents.
Author: John E. Kolassa and Juan Zhang
Maintainer: John E. Kolassa <kolassa@stat.rutgers.edu>
Diff between PHInfiniteEstimates versions 1.2 dated 2020-03-25 and 1.3 dated 2020-03-29
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- R/convertbaselineltolr.R | 15 ++++++++------- build/partial.rdb |binary man/convertbaselineltolr.Rd | 15 ++++++++------- 5 files changed, 23 insertions(+), 21 deletions(-)
More information about PHInfiniteEstimates at CRAN
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Title: Combination Matrix Axis for 'ggplot2' to Create 'UpSet' Plots
Description: Replace the standard x-axis in 'ggplots' with a combination matrix
to visualize complex set overlaps. 'UpSet' has introduced a new way to visualize
the overlap of sets as an alternative to Venn diagrams.
This package provides a simple way to produce such plots using 'ggplot2'.
In addition it can convert any categorical axis into a combination
matrix axis.
Author: Constantin Ahlmann-Eltze [aut, cre]
(<https://orcid.org/0000-0002-3762-068X>)
Maintainer: Constantin Ahlmann-Eltze <artjom31415@googlemail.com>
Diff between ggupset versions 0.2.0 dated 2020-03-25 and 0.2.1 dated 2020-03-29
DESCRIPTION | 10 +++++----- MD5 | 18 +++++++++--------- NEWS.md | 5 +++++ R/axis_combmatrix.R | 8 ++++++++ R/scale_upset.R | 14 ++++++++++---- README.md | 10 +++++----- man/axis_combmatrix.Rd | 19 +++++++++++++++++-- man/figures/README-unnamed-chunk-9-1.png |binary man/scale_x_upset.Rd | 14 +++++++++++--- man/theme_combmatrix.Rd | 18 ++++++++++++------ 10 files changed, 82 insertions(+), 34 deletions(-)
Title: Multivariate Pseudo-Random Number Generation
Description: Pseudo-random number generation for 11 multivariate distributions: Normal, t, Uniform, Bernoulli, Hypergeometric, Beta (Dirichlet), Multinomial, Dirichlet-Multinomial, Laplace, Wishart, and Inverted Wishart. The details of the method are explained in Demirtas (2004) <DOI:10.22237/jmasm/1099268340>.
Author: Hakan Demirtas, Rawan Allozi, Ran Gao
Maintainer: Ran Gao <rgao8@uic.edu>
Diff between MultiRNG versions 1.2.2 dated 2019-05-14 and 1.2.3 dated 2020-03-29
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- man/MultiRNG-package.Rd | 4 ++-- 3 files changed, 8 insertions(+), 8 deletions(-)
Title: 'sf'-Based Interface to the 'HERE' REST APIs
Description: Interface to the 'HERE' REST APIs <https://developer.here.com/develop/rest-apis>:
(1) geocode and autocomplete addresses or reverse geocode POIs using the 'Geocoder' API;
(2) route directions, travel distance or time matrices and isolines using the 'Routing' API;
(3) request real-time traffic flow and incident information from the 'Traffic' API;
(4) find request public transport connections and nearby stations from the 'Public Transit' API;
(5) get weather forecasts, reports on current weather conditions, astronomical
information and alerts at a specific location from the 'Destination Weather' API.
Locations, routes and isolines are returned as 'sf' objects.
Author: Merlin Unterfinger [aut, cre]
Maintainer: Merlin Unterfinger <info@munterfinger.ch>
Diff between hereR versions 0.3.1 dated 2020-01-29 and 0.3.2 dated 2020-03-29
hereR-0.3.1/hereR/man/traffic-deprecated.Rd |only hereR-0.3.2/hereR/DESCRIPTION | 10 hereR-0.3.2/hereR/MD5 | 70 hereR-0.3.2/hereR/NEWS.md | 7 hereR-0.3.2/hereR/R/connection.R | 3 hereR-0.3.2/hereR/R/defunct.R | 47 hereR-0.3.2/hereR/R/deprecated.R | 165 hereR-0.3.2/hereR/R/flow.R | 3 hereR-0.3.2/hereR/R/geocode.R | 5 hereR-0.3.2/hereR/R/incident.R | 3 hereR-0.3.2/hereR/R/reverse_geocode.R | 5 hereR-0.3.2/hereR/R/station.R | 4 hereR-0.3.2/hereR/R/sysdata.rda |binary hereR-0.3.2/hereR/R/weather.R | 5 hereR-0.3.2/hereR/build/vignette.rds |binary hereR-0.3.2/hereR/data/aoi.rda |binary hereR-0.3.2/hereR/data/poi.rda |binary hereR-0.3.2/hereR/inst/doc/authentication.html | 8 hereR-0.3.2/hereR/inst/doc/geocoder.R | 27 hereR-0.3.2/hereR/inst/doc/geocoder.Rmd | 5 hereR-0.3.2/hereR/inst/doc/geocoder.html | 110 hereR-0.3.2/hereR/inst/doc/routing.html | 178 hereR-0.3.2/hereR/inst/doc/traffic.html | 68 hereR-0.3.2/hereR/inst/doc/transit.R | 37 hereR-0.3.2/hereR/inst/doc/transit.Rmd | 5 hereR-0.3.2/hereR/inst/doc/transit.html | 161 hereR-0.3.2/hereR/inst/doc/weather.R | 80 hereR-0.3.2/hereR/inst/doc/weather.Rmd | 10 hereR-0.3.2/hereR/inst/doc/weather.html | 5139 ------------------------- hereR-0.3.2/hereR/man/aoi.Rd | 4 hereR-0.3.2/hereR/man/hereR-defunct.Rd | 16 hereR-0.3.2/hereR/man/hereR-deprecated.Rd | 16 hereR-0.3.2/hereR/man/poi.Rd | 4 hereR-0.3.2/hereR/man/traffic-defunct.Rd |only hereR-0.3.2/hereR/vignettes/geocoder.Rmd | 5 hereR-0.3.2/hereR/vignettes/transit.Rmd | 5 hereR-0.3.2/hereR/vignettes/weather.Rmd | 10 37 files changed, 730 insertions(+), 5485 deletions(-)
Title: Generation of Bivariate Uniform Data and Its Relation to
Bivariate Binary Data
Description: Simulation of bivariate uniform data with a full range of correlations based on
two beta densities and computation of the tetrachoric correlation
(correlation of bivariate uniform data) from the phi coefficient
(correlation of bivariate binary data) and vice versa.
Author: Hakan Demirtas, Rawan Allozi, Ran Gao
Maintainer: Ran Gao <rgao8@uic.edu>
Diff between BivUnifBin versions 1.3.1 dated 2019-05-16 and 1.3.2 dated 2020-03-29
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- man/BivUnifBin-package.Rd | 4 ++-- 3 files changed, 8 insertions(+), 8 deletions(-)
Title: Relevance-Integrated Statistical Inference Engine
Description: A framework of methods to perform customized inference at individual level
by taking contextual covariates into account. Three main functions are provided
in this package: (i) LASER(): it generates specially-designed artificial relevant
samples for a given case; (ii) g2l.proc(): computes customized fdr(z|x); and (iii)
rEB.proc(): performs empirical Bayes inference based on LASERs. The details can be
found in Mukhopadhyay, S., and Wang, K (2020, Technical Report).
Author: Subhadeep Mukhopadhyay, Kaijun Wang
Maintainer: Kaijun Wang <kwang2@fredhutch.org>
Diff between LPRelevance versions 2.1 dated 2019-10-07 and 3.0 dated 2020-03-29
DESCRIPTION | 14 ++++---- MD5 | 33 ++++++++++---------- NAMESPACE | 5 ++- R/Finite.rEB.R | 57 ++++++++++-------------------------- R/LASER.R | 56 ++++++++++------------------------- R/LPcden.R | 24 ++++++++++----- R/LPregression.R | 62 ++++++++++++++++++++------------------- R/g2l.infer.R | 70 ++++++++++++++++++++++++++++---------------- R/g2l.infer.boot.R | 71 ++++++++++++++++++++++++++++----------------- R/g2l.proc.R | 35 ++++++++++++++-------- R/rEB.proc.R | 15 ++++++--- R/z.lp.center.R |only build/partial.rdb |binary man/LASER.Rd | 36 +++++++--------------- man/LPRelevance-package.Rd | 4 +- man/funnel.Rd | 4 +- man/g2l.proc.Rd | 50 +++++++++---------------------- man/rEB.proc.Rd | 38 +++++++----------------- 18 files changed, 277 insertions(+), 297 deletions(-)
Title: Analytic Insurance Rating Techniques
Description: Methods for insurance rating. It provides a data driven strategy for the construction of
insurance tariff classes. This strategy is based on the work by Antonio and Valdez (2012) <doi:10.1007/s10182-011-0152-7>.
The package also adds functionality showing additional lines for the reference
categories in the levels of the coefficients in the output of a generalized linear regression analysis.
In addition it implements a procedure determining the level of a factor with the largest exposure,
and thereafter changing the base level of the factor to this level.
Author: Martin Haringa [aut, cre]
Maintainer: Martin Haringa <mtharinga@gmail.com>
Diff between insurancerating versions 0.5.0 dated 2020-03-12 and 0.5.1 dated 2020-03-29
insurancerating-0.5.0/insurancerating/man/figures/example-1.png |only insurancerating-0.5.0/insurancerating/man/figures/plaatje-1.png |only insurancerating-0.5.1/insurancerating/DESCRIPTION | 15 +- insurancerating-0.5.1/insurancerating/MD5 | 63 ++++++++-- insurancerating-0.5.1/insurancerating/NAMESPACE | 46 +++++++ insurancerating-0.5.1/insurancerating/NEWS.md | 17 ++ insurancerating-0.5.1/insurancerating/R/MTPL2.R |only insurancerating-0.5.1/insurancerating/R/construct_tariff_classes.R | 11 + insurancerating-0.5.1/insurancerating/R/fit_gam.R | 11 + insurancerating-0.5.1/insurancerating/R/period_to_months.R | 9 + insurancerating-0.5.1/insurancerating/R/univariate_1freq.R |only insurancerating-0.5.1/insurancerating/R/univariate_1freq_plot.R |only insurancerating-0.5.1/insurancerating/R/univariate_2avgsev.R |only insurancerating-0.5.1/insurancerating/R/univariate_2avgsev_plot.R |only insurancerating-0.5.1/insurancerating/R/univariate_3riskpremium.R |only insurancerating-0.5.1/insurancerating/R/univariate_3riskpremium_plot.R |only insurancerating-0.5.1/insurancerating/R/univariate_4loss_ratio.R |only insurancerating-0.5.1/insurancerating/R/univariate_4loss_ratio_plot.R |only insurancerating-0.5.1/insurancerating/R/univariate_5avgpremium.R |only insurancerating-0.5.1/insurancerating/R/univariate_5avgpremium_plot.R |only insurancerating-0.5.1/insurancerating/R/univariate_6exposure.R |only insurancerating-0.5.1/insurancerating/R/univariate_6exposure_plot.R |only insurancerating-0.5.1/insurancerating/R/univariate_all.R |only insurancerating-0.5.1/insurancerating/R/univariate_all_plot.R |only insurancerating-0.5.1/insurancerating/R/zzz.R | 2 insurancerating-0.5.1/insurancerating/data/MTPL2.rda |only insurancerating-0.5.1/insurancerating/inst/doc/vignette.pdf |binary insurancerating-0.5.1/insurancerating/man/MTPL.Rd | 6 insurancerating-0.5.1/insurancerating/man/MTPL2.Rd |only insurancerating-0.5.1/insurancerating/man/autoplot.univ_all.Rd |only insurancerating-0.5.1/insurancerating/man/autoplot.univ_avgpremium.Rd |only insurancerating-0.5.1/insurancerating/man/autoplot.univ_avgsev.Rd |only insurancerating-0.5.1/insurancerating/man/autoplot.univ_exposure.Rd |only insurancerating-0.5.1/insurancerating/man/autoplot.univ_freq.Rd |only insurancerating-0.5.1/insurancerating/man/autoplot.univ_lossratio.Rd |only insurancerating-0.5.1/insurancerating/man/autoplot.univ_premium.Rd |only insurancerating-0.5.1/insurancerating/man/figures/example4-1.png |only insurancerating-0.5.1/insurancerating/man/figures/example5-1.png |only insurancerating-0.5.1/insurancerating/man/figures/example6-1.png |only insurancerating-0.5.1/insurancerating/man/figures/example8-1.png |only insurancerating-0.5.1/insurancerating/man/figures/example9-1.png |only insurancerating-0.5.1/insurancerating/man/figures/figfreq-1.png |only insurancerating-0.5.1/insurancerating/man/figures/figsev-1.png |only insurancerating-0.5.1/insurancerating/man/figures/plotgam-1.png |only insurancerating-0.5.1/insurancerating/man/figures/unnamed-chunk-3-1.png |only insurancerating-0.5.1/insurancerating/man/figures/unnamed-chunk-4-1.png |only insurancerating-0.5.1/insurancerating/man/univariate_all.Rd |only insurancerating-0.5.1/insurancerating/man/univariate_average_premium.Rd |only insurancerating-0.5.1/insurancerating/man/univariate_average_severity.Rd |only insurancerating-0.5.1/insurancerating/man/univariate_exposure.Rd |only insurancerating-0.5.1/insurancerating/man/univariate_frequency.Rd |only insurancerating-0.5.1/insurancerating/man/univariate_loss_ratio.Rd |only insurancerating-0.5.1/insurancerating/man/univariate_risk_premium.Rd |only insurancerating-0.5.1/insurancerating/tests/testthat/test_construct_tariff_classes.R | 2 54 files changed, 153 insertions(+), 29 deletions(-)
More information about insurancerating at CRAN
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Title: Qualitative Palettes with Many Colors
Description: Tools for creating, viewing, and assessing qualitative
palettes with many (20-30 or more) colors. See Coombes and colleagues
(2019) <doi:10.18637/jss.v090.c01>.
Author: Kevin R. Coombes, Guy Brock
Maintainer: Kevin R. Coombes <krc@silicovore.com>
Diff between Polychrome versions 1.2.4 dated 2020-02-03 and 1.2.5 dated 2020-03-29
DESCRIPTION | 10 MD5 | 50 +- NAMESPACE | 3 NEWS | 8 R/palettes.R | 7 R/viewers.R | 2 build/vignette.rds |binary data/Dark24.rda |binary data/Light24.rda |binary data/alphabet.rda |binary data/colorsafe.rda |binary data/glasbey.rda |binary data/iscc.rda |binary data/palette36.rda |binary data/sky-colors.rda |only inst/doc/color-deficits.R | 30 - inst/doc/color-deficits.html | 729 ++++++++++++++++++-------------- inst/doc/creatingPalettes.R | 40 - inst/doc/creatingPalettes.html | 908 +++++++++++++++++++---------------------- inst/doc/polychrome.R | 26 - inst/doc/polychrome.html | 593 ++++++++++++++------------ inst/extData/barf.R |only inst/extData/juju.R |only inst/extData/tracker.Rda |only inst/extData/tracker.csv |only man/palettes.Rd | 8 man/sky.Rd |only tests/testXform.R | 8 tests/testXform.Rout.save | 21 29 files changed, 1286 insertions(+), 1157 deletions(-)
Title: Discovery of Process Models with the Heuristics Miner
Description: Provides the heuristics miner algorithm for process discovery
as proposed by Weijters et al. (2011) <doi:10.1109/CIDM.2011.5949453>. The
algorithm builds a causal net from an event log created with the 'bupaR'
package. Event logs are a set of ordered sequences of events for which
'bupaR' provides the S3 class eventlog(). The discovered causal nets
can be visualised as 'htmlwidgets' and it is possible to annotate them with
the occurrence frequency or processing and waiting time of process
activities.
Author: Felix Mannhardt [aut, cre]
Maintainer: Felix Mannhardt <felix.mannhardt@sintef.no>
Diff between heuristicsmineR versions 0.2.3 dated 2020-03-19 and 0.2.4 dated 2020-03-29
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- NEWS.md | 4 ++++ R/causal_net.R | 8 ++++---- R/causal_performance.R | 2 +- 5 files changed, 17 insertions(+), 13 deletions(-)
More information about heuristicsmineR at CRAN
Permanent link
Title: Access the City of Toronto Open Data Portal
Description: Access data from the "City of Toronto
Open Data Portal" (<https://open.toronto.ca>) directly from R.
Author: Sharla Gelfand [aut, cre],
City of Toronto [cph, fnd]
Maintainer: Sharla Gelfand <sharla.gelfand@gmail.com>
Diff between opendatatoronto versions 0.1.2 dated 2020-03-18 and 0.1.3 dated 2020-03-29
opendatatoronto-0.1.2/opendatatoronto/inst/doc/multifile_zip_resources.R |only opendatatoronto-0.1.2/opendatatoronto/inst/doc/multifile_zip_resources.Rmd |only opendatatoronto-0.1.2/opendatatoronto/inst/doc/multifile_zip_resources.html |only opendatatoronto-0.1.2/opendatatoronto/inst/doc/multiple_resources_purrr.R |only opendatatoronto-0.1.2/opendatatoronto/inst/doc/multiple_resources_purrr.Rmd |only opendatatoronto-0.1.2/opendatatoronto/inst/doc/multiple_resources_purrr.html |only opendatatoronto-0.1.2/opendatatoronto/inst/doc/multisheet_resources.R |only opendatatoronto-0.1.2/opendatatoronto/inst/doc/multisheet_resources.Rmd |only opendatatoronto-0.1.2/opendatatoronto/inst/doc/multisheet_resources.html |only opendatatoronto-0.1.2/opendatatoronto/inst/doc/opendatatoronto.R |only opendatatoronto-0.1.2/opendatatoronto/inst/doc/opendatatoronto.Rmd |only opendatatoronto-0.1.2/opendatatoronto/inst/doc/opendatatoronto.html |only opendatatoronto-0.1.2/opendatatoronto/inst/doc/spatial_data.R |only opendatatoronto-0.1.2/opendatatoronto/inst/doc/spatial_data.Rmd |only opendatatoronto-0.1.2/opendatatoronto/inst/doc/spatial_data.html |only opendatatoronto-0.1.2/opendatatoronto/vignettes/multifile_zip_resources.Rmd |only opendatatoronto-0.1.2/opendatatoronto/vignettes/multiple_resources_purrr.Rmd |only opendatatoronto-0.1.2/opendatatoronto/vignettes/multisheet_resources.Rmd |only opendatatoronto-0.1.2/opendatatoronto/vignettes/opendatatoronto.Rmd |only opendatatoronto-0.1.2/opendatatoronto/vignettes/spatial_data.Rmd |only opendatatoronto-0.1.3/opendatatoronto/DESCRIPTION | 10 - opendatatoronto-0.1.3/opendatatoronto/MD5 | 67 ++++------ opendatatoronto-0.1.3/opendatatoronto/NEWS.md | 9 + opendatatoronto-0.1.3/opendatatoronto/R/browse.R | 3 opendatatoronto-0.1.3/opendatatoronto/R/get_resource.R | 8 - opendatatoronto-0.1.3/opendatatoronto/R/list_package_resources.R | 1 opendatatoronto-0.1.3/opendatatoronto/R/list_packages.R | 1 opendatatoronto-0.1.3/opendatatoronto/R/search_packages.R | 1 opendatatoronto-0.1.3/opendatatoronto/R/show_package.R | 1 opendatatoronto-0.1.3/opendatatoronto/R/utils.R | 8 + opendatatoronto-0.1.3/opendatatoronto/README.md | 42 +++--- opendatatoronto-0.1.3/opendatatoronto/build/vignette.rds |binary opendatatoronto-0.1.3/opendatatoronto/inst/doc/intro-opendatatoronto.R |only opendatatoronto-0.1.3/opendatatoronto/inst/doc/intro-opendatatoronto.Rmd |only opendatatoronto-0.1.3/opendatatoronto/inst/doc/intro-opendatatoronto.html |only opendatatoronto-0.1.3/opendatatoronto/man/get_resource.Rd | 6 opendatatoronto-0.1.3/opendatatoronto/tests/testthat/test-browse.R | 12 + opendatatoronto-0.1.3/opendatatoronto/tests/testthat/test-get_resource.R | 8 + opendatatoronto-0.1.3/opendatatoronto/tests/testthat/test-list_package_resources.R | 10 + opendatatoronto-0.1.3/opendatatoronto/tests/testthat/test-list_packages.R | 8 + opendatatoronto-0.1.3/opendatatoronto/tests/testthat/test-search_packages.R | 8 + opendatatoronto-0.1.3/opendatatoronto/tests/testthat/test-show_package.R | 8 + opendatatoronto-0.1.3/opendatatoronto/tests/testthat/test-utils.R | 14 ++ opendatatoronto-0.1.3/opendatatoronto/vignettes/articles |only opendatatoronto-0.1.3/opendatatoronto/vignettes/intro-opendatatoronto.Rmd |only 45 files changed, 151 insertions(+), 74 deletions(-)
More information about opendatatoronto at CRAN
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Title: Graceful 'ggplot'-Based Graphics and Other Functions for GAMs
Fitted Using 'mgcv'
Description: Graceful 'ggplot'-based graphics and utility functions for working with generalized additive models (GAMs) fitted using the 'mgcv' package. Provides a reimplementation of the plot() method for GAMs that 'mgcv' provides, as well as 'tidyverse' compatible representations of estimated smooths.
Author: Gavin L. Simpson [aut, cre] (<https://orcid.org/0000-0002-9084-8413>),
Henrik Singmann [ctb] (<https://orcid.org/0000-0002-4842-3657>)
Maintainer: Gavin L. Simpson <ucfagls@gmail.com>
Diff between gratia versions 0.3.0 dated 2020-01-19 and 0.3.1 dated 2020-03-29
DESCRIPTION | 10 MD5 | 146 +- NAMESPACE | 15 NEWS.md | 22 R/derivatives.R | 38 R/family-utils.R |only R/utililties.R | 8 man/bird_move.Rd | 4 man/derivatives.Rd | 15 man/family.gam.Rd |only man/is_factor_var.Rd | 7 man/link.Rd |only man/smallAges.Rd | 4 man/zooplankton.Rd | 4 tests/Examples/gratia-Ex.Rout.save | 56 - tests/figs/derivatives-methods/draw-issue-47-derivatives-for-complex-factor-by.svg | 16 tests/figs/derivatives-methods/draw-issue-47-derivatives-for-complex-ordered-factor-by.svg | 16 tests/figs/derivatives-methods/draw-issue-47-derivatives-for-factor-by.svg | 12 tests/figs/derivatives-methods/draw-issue-47-derivatives-for-gamm-factor-by.svg | 16 tests/figs/draw-methods/draw-1d-smooth-for-selected-smooth-with-overall-uncertainty-false.svg | 4 tests/figs/draw-methods/draw-1d-smooth-for-selected-smooth.svg | 4 tests/figs/draw-methods/draw-2d-smooth.svg | 34 tests/figs/draw-methods/draw-am-with-2d-smooth.svg | 34 tests/figs/draw-methods/draw-am-with-continuous-by-var-fixed-scale.svg | 4 tests/figs/draw-methods/draw-am-with-continuous-by-variable-smooth.svg | 4 tests/figs/draw-methods/draw-am-with-factor-by-variable-smooth-with-fixed-scales.svg | 16 tests/figs/draw-methods/draw-am-with-factor-by-variable-smooth.svg | 16 tests/figs/draw-methods/draw-derivatives-for-a-gam-with-fixed-scales.svg | 16 tests/figs/draw-methods/draw-derivatives-for-a-gam.svg | 16 tests/figs/draw-methods/draw-evaluated-parametric-term-with-linear-parametric-term.svg | 4 tests/figs/draw-methods/draw-evaulated-2d-smooth-standard-errors.svg | 80 - tests/figs/draw-methods/draw-gam-model-with-fs-smooth-fixed-scales.svg | 8 tests/figs/draw-methods/draw-gam-model-with-fs-smooth.svg | 8 tests/figs/draw-methods/draw-gam-model-with-non-standard-names.svg | 4 tests/figs/draw-methods/draw-gam-model-with-ranef-smooth-factor-by-fixed-scales.svg | 12 tests/figs/draw-methods/draw-gam-model-with-ranef-smooth-factor-by.svg | 12 tests/figs/draw-methods/draw-gam-model-with-ranef-smooth-fixed-scales.svg | 16 tests/figs/draw-methods/draw-gam-model-with-ranef-smooth.svg | 16 tests/figs/draw-methods/draw-gam-smooth-for-selected-smooth-character.svg | 4 tests/figs/draw-methods/draw-gam-smooth-for-selected-smooth-logical.svg | 4 tests/figs/draw-methods/draw-gam-smooth-for-selected-smooth-numeric.svg | 4 tests/figs/draw-methods/draw-gam-smooth-for-two-selected-smooths-character.svg | 8 tests/figs/draw-methods/draw-gam-smooth-for-two-selected-smooths-logical.svg | 8 tests/figs/draw-methods/draw-gam-smooth-for-two-selected-smooths-numeric.svg | 8 tests/figs/draw-methods/draw-gam-with-factor-parametric-term.svg | 12 tests/figs/draw-methods/draw-gam-with-linear-parametric-term.svg | 16 tests/figs/draw-methods/draw-gam-with-overall-uncertainty-false.svg | 16 tests/figs/draw-methods/draw-gam-with-partial-match-true.svg | 12 tests/figs/draw-methods/draw-gam-with-select-and-parametric-is-false.svg | 12 tests/figs/draw-methods/draw-gam-with-select-and-parametric-is-null.svg | 12 tests/figs/draw-methods/draw-gam-with-select-and-parametric-is-true.svg | 12 tests/figs/draw-methods/draw-gam-without-select-and-parametric-is-false.svg | 16 tests/figs/draw-methods/draw-gam-without-select-and-parametric-is-true.svg | 16 tests/figs/draw-methods/draw-issue-39-empty-plots.svg | 8 tests/figs/draw-methods/draw-simple-multi-smooth-am-with-fixed-scales.svg | 16 tests/figs/draw-methods/draw-simple-multi-smooth-am.svg | 16 tests/figs/draw-methods/draw-std-error-of-2d-smooth.svg | 80 - tests/figs/draw-methods/draw-ziplss-parametric-terms-issue-45.svg | 16 tests/figs/qq-plot-methods/qq-plot-data-simulation-pearson-residuals.svg | 4 tests/figs/qq-plot-methods/qq-plot-data-simulation-response-residuals.svg | 4 tests/figs/qq-plot-methods/qq-plot-data-simulation.svg | 4 tests/figs/test-by-variables/continuous-by-variable-smmoth.svg | 4 tests/figs/test-by-variables/draw-gam-user-select-and-parametric-true.svg | 538 ++++++++++ tests/figs/test-hgam-paper-models/hgam-paper-bird-move-model-1.svg | 50 tests/figs/test-hgam-paper-models/hgam-paper-bird-move-model-2.svg | 74 - tests/figs/test-hgam-paper-models/hgam-paper-bird-move-model-3.svg | 408 +++---- tests/figs/test-hgam-paper-models/hgam-paper-bird-move-model-5.svg | 290 ++--- tests/figs/test-hgam-paper-models/hgam-paper-co2-model-1.svg | 4 tests/figs/test-hgam-paper-models/hgam-paper-co2-model-2.svg | 4 tests/figs/test-hgam-paper-models/hgam-paper-co2-model-3.svg | 52 tests/figs/test-hgam-paper-models/hgam-paper-co2-model-5.svg | 48 tests/figs/test-hgam-paper-models/hgam-paper-zoop-model-5.svg | 32 tests/testthat/test-by-variables.R | 2 tests/testthat/test-derivatives.R | 30 tests/testthat/test-family-utils.R |only tests/testthat/test-subsetting.R | 5 76 files changed, 1780 insertions(+), 766 deletions(-)
Title: 'leaflet' Extensions for 'mapview'
Description: Provides extensions for packages 'leaflet' & 'mapdeck',
many of which are used by package 'mapview'.
Focus is on functionality readily available in
Geographic Information Systems such as 'Quantum GIS'. Includes functions
to display coordinates of mouse pointer position, query image values via
mouse pointer and zoom-to-layer buttons. Additionally, provides a feature
type agnostic function to add points, lines, polygons to a map.
Author: Tim Appelhans [cre, aut],
Christoph Reudenbach [ctb],
Kenton Russell [ctb],
Jochen Darley [ctb],
Daniel Montague [ctb] (Leaflet.EasyButton plugin),
Lorenzo Busetto [ctb],
Luigi Ranghetti [ctb],
Miles McBain [ctb],
Sebastian Gatscha [ctb]
Maintainer: Tim Appelhans <tim.appelhans@gmail.com>
Diff between leafem versions 0.0.1 dated 2019-04-30 and 0.1.0 dated 2020-03-29
DESCRIPTION | 42 +++++-- MD5 | 58 ++++++--- NAMESPACE | 31 +++++ NEWS | 17 ++ NEWS.md | 17 ++ R/addRasterRGB.R |only R/addStarsImage.R |only R/extent.R |only R/features.R | 118 +++++++++++++++++--- R/file.R |only R/garnish.R | 38 +++--- R/homebutton.R | 48 ++++---- R/imagequery.R | 35 ++--- R/keys.R |only R/labels.R |only R/layers.R |only R/logo.R | 2 R/mousecoords.R | 101 ++++++----------- R/projection.R |only R/utils.R | 49 +++++++- README.md | 8 - inst/htmlwidgets/lib/File |only inst/htmlwidgets/lib/FlatGeoBuf |only inst/htmlwidgets/lib/HomeButton/home-button.js | 9 + inst/htmlwidgets/lib/clipboard |only inst/htmlwidgets/lib/joda/addImageQuery-bindings.js |only inst/htmlwidgets/lib/joda/joda.js | 70 ++++------- man/addCopyExtent.Rd |only man/addExtent.Rd |only man/addFgb.Rd |only man/addHomeButton.Rd | 17 ++ man/addImageQuery.Rd | 23 +++ man/addLocalFile.Rd |only man/addLogo.Rd | 13 +- man/addMouseCoordinates.Rd | 15 ++ man/addRasterRGB.Rd |only man/addStarsImage.Rd |only man/addStaticLabels.Rd |only man/addTileFolder.Rd |only man/updateLayersControl.Rd |only 40 files changed, 484 insertions(+), 227 deletions(-)
Title: Loads Shapefiles of Official Spatial Data Sets of Brazil
Description: Easy access to official spatial data sets of Brazil as 'sf' objects in R.
The package includes a wide range of geospatial data available at various
geographic scales and for various years with harmonized attributes, projection and topology.
Author: Rafael H. M. Pereira [aut, cre]
(<https://orcid.org/0000-0003-2125-7465>),
Caio Nogueira Goncalves [aut],
Paulo Henrique Fernandes de Araujo [ctb],
Guilherme Duarte Carvalho [ctb],
Rodrigo Almeida de Arruda [ctb],
Igor Nascimento [ctb],
Barbara Santiago Pedreira da Costa [ctb],
Welligtton Silva Cavedo [ctb],
Pedro R. Andrade [ctb],
Alan da Silva [ctb],
Carlos Kauê Vieira Braga [ctb],
Ipea - Institue for Applied Economic Research [cph, fnd]
Maintainer: Rafael H. M. Pereira <rafa.pereira.br@gmail.com>
Diff between geobr versions 1.2 dated 2020-02-20 and 1.3 dated 2020-03-29
DESCRIPTION | 22 - MD5 | 179 +++++----- NAMESPACE | 6 R/download_metadata.R | 2 R/geobr.R | 5 R/list_geobr.R | 1 R/lookup_muni.R | 15 R/read_amazon.R | 39 -- R/read_biomes.R | 39 -- R/read_census_tract.R | 80 +--- R/read_conservation_units.R | 39 -- R/read_country.R | 40 -- R/read_disaster_risk_area.R | 38 -- R/read_health_facilities.R | 18 - R/read_immediate_region.R | 40 -- R/read_indigenous_land.R | 41 -- R/read_intermediate_region.R | 51 +- R/read_meso_region.R | 74 +--- R/read_metro_area.R | 42 -- R/read_micro_region.R | 77 +--- R/read_municipal_seat.R | 31 - R/read_municipality.R | 93 +---- R/read_neighborhood.R |only R/read_region.R | 37 -- R/read_semiarid.R | 45 -- R/read_state.R | 80 +--- R/read_statistical_grid.R | 78 +--- R/read_urban_area.R | 41 -- R/read_weighting_area.R | 89 +---- R/utils.R | 198 ++++++++++- inst/doc/intro_to_geobr.Rmd | 4 inst/doc/intro_to_geobr.html | 35 + man/download_gpkg.Rd | 13 man/figures/geobr_hexsticker.R | 90 ++++- man/figures/geobr_logo_b.png |binary man/figures/geobr_logo_b.svg | 442 ++++++++++++------------- man/figures/geobr_logo_b_small.png |only man/figures/geobr_logo_y.png |binary man/figures/geobr_logo_y.svg | 442 ++++++++++++------------- man/geobr.Rd | 24 - man/grid_state_correspondence_table.Rd | 4 man/list_geobr.Rd | 50 +- man/load_gpkg.Rd |only man/read_amazon.Rd | 9 man/read_biomes.Rd | 9 man/read_census_tract.Rd | 18 - man/read_conservation_units.Rd | 16 man/read_country.Rd | 11 man/read_disaster_risk_area.Rd | 15 man/read_health_facilities.Rd | 5 man/read_immediate_region.Rd | 17 man/read_indigenous_land.Rd | 10 man/read_intermediate_region.Rd | 15 man/read_meso_region.Rd | 17 man/read_metro_area.Rd | 12 man/read_micro_region.Rd | 19 - man/read_municipal_seat.Rd | 4 man/read_municipality.Rd | 17 man/read_neighborhood.Rd |only man/read_region.Rd | 9 man/read_semiarid.Rd | 9 man/read_state.Rd | 115 +++--- man/read_statistical_grid.Rd | 7 man/read_urban_area.Rd | 10 man/read_weighting_area.Rd | 17 man/select_data_type.Rd | 11 man/select_metadata.Rd |only man/select_year_input.Rd |only tests/testthat/test-download_metadata.R | 13 tests/testthat/test-list_geobr.R | 1 tests/testthat/test-lookup_muni.R | 21 - tests/testthat/test-read_amazon.R | 18 - tests/testthat/test-read_biomes.R | 15 tests/testthat/test-read_census_tract.R | 64 +-- tests/testthat/test-read_conservation_units.R | 13 tests/testthat/test-read_country.R | 17 tests/testthat/test-read_disaster_risk_area.R | 30 - tests/testthat/test-read_health_facilities.R | 37 -- tests/testthat/test-read_immediate_region.R | 34 - tests/testthat/test-read_indigenous_land.R | 16 tests/testthat/test-read_intermediate_region.R | 36 -- tests/testthat/test-read_meso_region.R | 58 --- tests/testthat/test-read_metro_area.R | 3 tests/testthat/test-read_micro_region.R | 58 --- tests/testthat/test-read_municipal_seat.R | 7 tests/testthat/test-read_municipality.R | 73 +--- tests/testthat/test-read_neighborhood.R |only tests/testthat/test-read_region.R | 41 -- tests/testthat/test-read_semiarid.R | 5 tests/testthat/test-read_state.R | 78 +--- tests/testthat/test-read_statistical_grid.R | 64 --- tests/testthat/test-read_urban_area.R | 8 tests/testthat/test-read_weighting_area.R | 67 --- vignettes/intro_to_geobr.Rmd | 4 94 files changed, 1707 insertions(+), 2090 deletions(-)
Title: Handling of Swedish Identity Numbers
Description: Structural handling of identity numbers used in the Swedish
administration such as personal identity numbers ('personnummer') and
organizational identity numbers ('organisationsnummer').
Author: Mans Magnusson and Erik Bulow
Maintainer: Mans Magnusson <mons.magnusson@gmail.com>
Diff between sweidnumbr versions 1.4.1 dated 2016-09-14 and 1.4.2 dated 2020-03-29
DESCRIPTION | 12 - MD5 | 64 ++--- R/luhn_algo.R | 7 R/pin.R | 42 ++- build/vignette.rds |binary inst/doc/sweidnumbr.R | 34 +- inst/doc/sweidnumbr.Rmd | 6 inst/doc/sweidnumbr.html | 415 ++++++++++++++++++++++++++++-------- man/as.oin.Rd | 1 man/as.pin.Rd | 7 man/create_s3_method.Rd | 1 man/fake_pins.Rd | 1 man/format_pin.Rd | 1 man/is.oin.Rd | 1 man/luhn_algo.Rd | 8 man/oin_ctrl.Rd | 1 man/oin_group.Rd | 1 man/oin_group_element.Rd | 1 man/pin_age.Rd | 5 man/pin_birthplace.Rd | 1 man/pin_birthplace_internal.Rd | 1 man/pin_century.Rd | 1 man/pin_convert.Rd | 1 man/pin_coordn.Rd | 9 man/pin_coordn_correct.Rd | 1 man/pin_ctrl.Rd | 9 man/pin_sex.Rd | 9 man/pin_to_date.Rd | 1 man/roin.Rd | 1 man/rpin.Rd | 10 man/sweidnumbr.Rd | 2 tests/testthat/test-pin_test_file.R | 5 vignettes/sweidnumbr.Rmd | 6 33 files changed, 456 insertions(+), 209 deletions(-)
Title: Amazon Web Services Security, Identity, & Compliance APIs
Description: Interface to Amazon Web Services security, identity, and
compliance APIs, including the 'Identity & Access Management' ('IAM')
service for managing access to services and resources, and more
<https://aws.amazon.com/>.
Author: David Kretch [aut, cre],
Adam Banker [aut],
Amazon.com, Inc. [cph]
Maintainer: David Kretch <david.kretch@gmail.com>
Diff between paws.security.identity versions 0.1.6 dated 2020-01-14 and 0.1.7 dated 2020-03-29
DESCRIPTION | 8 MD5 | 574 ++++++------- R/acm_operations.R | 10 R/acm_service.R | 7 R/acmpca_service.R | 7 R/clouddirectory_service.R | 7 R/cloudhsm_service.R | 7 R/cloudhsmv2_service.R | 7 R/cognitoidentity_service.R | 7 R/cognitoidentityprovider_service.R | 7 R/cognitosync_service.R | 7 R/directoryservice_service.R | 7 R/fms_service.R | 7 R/guardduty_service.R | 7 R/iam_operations.R | 340 +++---- R/iam_service.R | 7 R/inspector_operations.R | 64 - R/inspector_service.R | 7 R/kms_operations.R | 156 +-- R/kms_service.R | 7 R/macie_service.R | 7 R/ram_service.R | 7 R/secretsmanager_operations.R | 62 - R/secretsmanager_service.R | 9 R/securityhub_service.R | 7 R/shield_service.R | 7 R/sts_operations.R | 36 R/sts_service.R | 9 R/waf_operations.R | 84 - R/waf_service.R | 7 R/wafregional_operations.R | 84 - R/wafregional_service.R | 7 man/acm.Rd | 4 man/acm_request_certificate.Rd | 2 man/acmpca.Rd | 4 man/clouddirectory.Rd | 4 man/cloudhsm.Rd | 4 man/cloudhsmv2.Rd | 4 man/cognitoidentity.Rd | 4 man/cognitoidentityprovider.Rd | 4 man/cognitosync.Rd | 4 man/directoryservice.Rd | 4 man/fms.Rd | 4 man/guardduty.Rd | 4 man/iam.Rd | 4 man/iam_add_client_id_to_open_id_connect_provider.Rd | 4 man/iam_add_role_to_instance_profile.Rd | 4 man/iam_add_user_to_group.Rd | 4 man/iam_attach_group_policy.Rd | 4 man/iam_attach_role_policy.Rd | 4 man/iam_attach_user_policy.Rd | 4 man/iam_change_password.Rd | 6 man/iam_create_access_key.Rd | 4 man/iam_create_account_alias.Rd | 4 man/iam_create_group.Rd | 4 man/iam_create_instance_profile.Rd | 4 man/iam_create_login_profile.Rd | 6 man/iam_create_open_id_connect_provider.Rd | 4 man/iam_create_role.Rd | 4 man/iam_create_user.Rd | 4 man/iam_delete_access_key.Rd | 4 man/iam_delete_account_alias.Rd | 4 man/iam_delete_account_password_policy.Rd | 4 man/iam_delete_group_policy.Rd | 4 man/iam_delete_instance_profile.Rd | 4 man/iam_delete_login_profile.Rd | 4 man/iam_delete_role.Rd | 4 man/iam_delete_role_policy.Rd | 4 man/iam_delete_signing_certificate.Rd | 4 man/iam_delete_user.Rd | 4 man/iam_delete_user_policy.Rd | 4 man/iam_delete_virtual_mfa_device.Rd | 4 man/iam_generate_organizations_access_report.Rd | 4 man/iam_generate_service_last_accessed_details.Rd | 4 man/iam_get_account_password_policy.Rd | 4 man/iam_get_account_summary.Rd | 4 man/iam_get_instance_profile.Rd | 4 man/iam_get_login_profile.Rd | 4 man/iam_get_organizations_access_report.Rd | 4 man/iam_get_role.Rd | 4 man/iam_get_service_last_accessed_details.Rd | 4 man/iam_get_service_last_accessed_details_with_entities.Rd | 4 man/iam_get_user.Rd | 4 man/iam_list_access_keys.Rd | 4 man/iam_list_account_aliases.Rd | 4 man/iam_list_group_policies.Rd | 4 man/iam_list_groups.Rd | 4 man/iam_list_groups_for_user.Rd | 4 man/iam_list_policies_granting_service_access.Rd | 4 man/iam_list_role_tags.Rd | 4 man/iam_list_signing_certificates.Rd | 4 man/iam_list_user_tags.Rd | 4 man/iam_list_users.Rd | 4 man/iam_list_virtual_mfa_devices.Rd | 4 man/iam_put_group_policy.Rd | 6 man/iam_put_role_policy.Rd | 6 man/iam_put_user_policy.Rd | 6 man/iam_remove_role_from_instance_profile.Rd | 4 man/iam_remove_user_from_group.Rd | 4 man/iam_set_security_token_service_preferences.Rd | 4 man/iam_simulate_custom_policy.Rd | 2 man/iam_tag_role.Rd | 4 man/iam_tag_user.Rd | 4 man/iam_untag_role.Rd | 4 man/iam_untag_user.Rd | 4 man/iam_update_access_key.Rd | 4 man/iam_update_account_password_policy.Rd | 2 man/iam_update_assume_role_policy.Rd | 6 man/iam_update_group.Rd | 4 man/iam_update_login_profile.Rd | 4 man/iam_update_signing_certificate.Rd | 4 man/iam_update_user.Rd | 2 man/iam_upload_server_certificate.Rd | 4 man/iam_upload_signing_certificate.Rd | 4 man/inspector.Rd | 4 man/inspector_add_attributes_to_findings.Rd | 4 man/inspector_create_assessment_target.Rd | 4 man/inspector_create_assessment_template.Rd | 4 man/inspector_create_resource_group.Rd | 4 man/inspector_delete_assessment_run.Rd | 4 man/inspector_delete_assessment_target.Rd | 4 man/inspector_delete_assessment_template.Rd | 4 man/inspector_describe_assessment_runs.Rd | 4 man/inspector_describe_assessment_targets.Rd | 4 man/inspector_describe_assessment_templates.Rd | 4 man/inspector_describe_cross_account_access_role.Rd | 4 man/inspector_describe_findings.Rd | 4 man/inspector_describe_resource_groups.Rd | 4 man/inspector_describe_rules_packages.Rd | 4 man/inspector_get_telemetry_metadata.Rd | 4 man/inspector_list_assessment_run_agents.Rd | 4 man/inspector_list_assessment_runs.Rd | 4 man/inspector_list_assessment_targets.Rd | 4 man/inspector_list_assessment_templates.Rd | 4 man/inspector_list_event_subscriptions.Rd | 4 man/inspector_list_findings.Rd | 4 man/inspector_list_rules_packages.Rd | 4 man/inspector_list_tags_for_resource.Rd | 4 man/inspector_preview_agents.Rd | 4 man/inspector_register_cross_account_access_role.Rd | 4 man/inspector_remove_attributes_from_findings.Rd | 4 man/inspector_set_tags_for_resource.Rd | 4 man/inspector_start_assessment_run.Rd | 4 man/inspector_stop_assessment_run.Rd | 4 man/inspector_subscribe_to_event.Rd | 4 man/inspector_unsubscribe_from_event.Rd | 4 man/inspector_update_assessment_target.Rd | 4 man/kms.Rd | 4 man/kms_cancel_key_deletion.Rd | 4 man/kms_create_alias.Rd | 4 man/kms_create_grant.Rd | 4 man/kms_create_key.Rd | 74 - man/kms_decrypt.Rd | 4 man/kms_delete_alias.Rd | 4 man/kms_delete_imported_key_material.Rd | 4 man/kms_describe_key.Rd | 4 man/kms_disable_key.Rd | 4 man/kms_disable_key_rotation.Rd | 4 man/kms_enable_key.Rd | 4 man/kms_enable_key_rotation.Rd | 4 man/kms_encrypt.Rd | 4 man/kms_generate_data_key.Rd | 4 man/kms_generate_data_key_without_plaintext.Rd | 4 man/kms_generate_random.Rd | 4 man/kms_get_key_policy.Rd | 4 man/kms_get_key_rotation_status.Rd | 4 man/kms_get_parameters_for_import.Rd | 4 man/kms_import_key_material.Rd | 4 man/kms_list_aliases.Rd | 4 man/kms_list_grants.Rd | 4 man/kms_list_key_policies.Rd | 4 man/kms_list_keys.Rd | 4 man/kms_list_resource_tags.Rd | 4 man/kms_list_retirable_grants.Rd | 4 man/kms_put_key_policy.Rd | 6 man/kms_re_encrypt.Rd | 4 man/kms_retire_grant.Rd | 4 man/kms_revoke_grant.Rd | 4 man/kms_schedule_key_deletion.Rd | 4 man/kms_tag_resource.Rd | 4 man/kms_untag_resource.Rd | 4 man/kms_update_alias.Rd | 4 man/kms_update_key_description.Rd | 4 man/macie.Rd | 4 man/ram.Rd | 4 man/secretsmanager.Rd | 4 man/secretsmanager_cancel_rotate_secret.Rd | 4 man/secretsmanager_create_secret.Rd | 6 man/secretsmanager_delete_resource_policy.Rd | 4 man/secretsmanager_delete_secret.Rd | 4 man/secretsmanager_describe_secret.Rd | 4 man/secretsmanager_get_random_password.Rd | 2 man/secretsmanager_get_resource_policy.Rd | 4 man/secretsmanager_get_secret_value.Rd | 4 man/secretsmanager_list_secret_version_ids.Rd | 4 man/secretsmanager_list_secrets.Rd | 4 man/secretsmanager_put_resource_policy.Rd | 6 man/secretsmanager_put_secret_value.Rd | 6 man/secretsmanager_restore_secret.Rd | 4 man/secretsmanager_rotate_secret.Rd | 6 man/secretsmanager_tag_resource.Rd | 4 man/secretsmanager_untag_resource.Rd | 4 man/secretsmanager_update_secret.Rd | 10 man/secretsmanager_update_secret_version_stage.Rd | 8 man/securityhub.Rd | 4 man/shield.Rd | 4 man/sts.Rd | 6 man/sts_assume_role.Rd | 6 man/sts_assume_role_with_saml.Rd | 4 man/sts_assume_role_with_web_identity.Rd | 6 man/sts_decode_authorization_message.Rd | 4 man/sts_get_caller_identity.Rd | 8 man/sts_get_federation_token.Rd | 6 man/sts_get_session_token.Rd | 4 man/waf.Rd | 4 man/waf_create_ip_set.Rd | 4 man/waf_create_rule.Rd | 4 man/waf_create_size_constraint_set.Rd | 4 man/waf_create_sql_injection_match_set.Rd | 4 man/waf_create_web_acl.Rd | 4 man/waf_create_xss_match_set.Rd | 4 man/waf_delete_byte_match_set.Rd | 4 man/waf_delete_ip_set.Rd | 4 man/waf_delete_rule.Rd | 4 man/waf_delete_size_constraint_set.Rd | 4 man/waf_delete_sql_injection_match_set.Rd | 4 man/waf_delete_web_acl.Rd | 4 man/waf_delete_xss_match_set.Rd | 4 man/waf_get_byte_match_set.Rd | 4 man/waf_get_change_token.Rd | 4 man/waf_get_change_token_status.Rd | 4 man/waf_get_ip_set.Rd | 4 man/waf_get_rule.Rd | 4 man/waf_get_sampled_requests.Rd | 4 man/waf_get_size_constraint_set.Rd | 4 man/waf_get_sql_injection_match_set.Rd | 4 man/waf_get_web_acl.Rd | 4 man/waf_get_xss_match_set.Rd | 4 man/waf_list_ip_sets.Rd | 4 man/waf_list_rules.Rd | 4 man/waf_list_size_constraint_sets.Rd | 4 man/waf_list_sql_injection_match_sets.Rd | 4 man/waf_list_web_ac_ls.Rd | 4 man/waf_list_xss_match_sets.Rd | 4 man/waf_update_byte_match_set.Rd | 4 man/waf_update_ip_set.Rd | 4 man/waf_update_rule.Rd | 4 man/waf_update_size_constraint_set.Rd | 4 man/waf_update_sql_injection_match_set.Rd | 4 man/waf_update_web_acl.Rd | 4 man/waf_update_xss_match_set.Rd | 4 man/wafregional.Rd | 4 man/wafregional_create_ip_set.Rd | 4 man/wafregional_create_rule.Rd | 4 man/wafregional_create_size_constraint_set.Rd | 4 man/wafregional_create_sql_injection_match_set.Rd | 4 man/wafregional_create_web_acl.Rd | 4 man/wafregional_create_xss_match_set.Rd | 4 man/wafregional_delete_byte_match_set.Rd | 4 man/wafregional_delete_ip_set.Rd | 4 man/wafregional_delete_rule.Rd | 4 man/wafregional_delete_size_constraint_set.Rd | 4 man/wafregional_delete_sql_injection_match_set.Rd | 4 man/wafregional_delete_web_acl.Rd | 4 man/wafregional_delete_xss_match_set.Rd | 4 man/wafregional_get_byte_match_set.Rd | 4 man/wafregional_get_change_token.Rd | 4 man/wafregional_get_change_token_status.Rd | 4 man/wafregional_get_ip_set.Rd | 4 man/wafregional_get_rule.Rd | 4 man/wafregional_get_sampled_requests.Rd | 4 man/wafregional_get_size_constraint_set.Rd | 4 man/wafregional_get_sql_injection_match_set.Rd | 4 man/wafregional_get_web_acl.Rd | 4 man/wafregional_get_xss_match_set.Rd | 4 man/wafregional_list_ip_sets.Rd | 4 man/wafregional_list_rules.Rd | 4 man/wafregional_list_size_constraint_sets.Rd | 4 man/wafregional_list_sql_injection_match_sets.Rd | 4 man/wafregional_list_web_ac_ls.Rd | 4 man/wafregional_list_xss_match_sets.Rd | 4 man/wafregional_update_byte_match_set.Rd | 4 man/wafregional_update_ip_set.Rd | 4 man/wafregional_update_rule.Rd | 4 man/wafregional_update_size_constraint_set.Rd | 4 man/wafregional_update_sql_injection_match_set.Rd | 4 man/wafregional_update_web_acl.Rd | 4 man/wafregional_update_xss_match_set.Rd | 4 288 files changed, 1342 insertions(+), 1362 deletions(-)
More information about paws.security.identity at CRAN
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Title: Amazon Web Services Machine Learning APIs
Description: Interface to Amazon Web Services machine learning APIs,
including 'SageMaker' managed machine learning service, natural
language processing, speech recognition, translation, and more
<https://aws.amazon.com/machine-learning/>.
Author: David Kretch [aut, cre],
Adam Banker [aut],
Amazon.com, Inc. [cph]
Maintainer: David Kretch <david.kretch@gmail.com>
Diff between paws.machine.learning versions 0.1.6 dated 2020-01-14 and 0.1.7 dated 2020-03-29
DESCRIPTION | 8 - MD5 | 124 +++++++++++++------------- R/comprehend_service.R | 7 - R/comprehendmedical_service.R | 7 - R/lexmodelbuildingservice_operations.R | 44 ++++----- R/lexmodelbuildingservice_service.R | 7 - R/lexruntimeservice_service.R | 7 - R/machinelearning_service.R | 7 - R/personalize_service.R | 7 - R/personalizeevents_service.R | 7 - R/personalizeruntime_service.R | 7 - R/polly_operations.R | 12 +- R/polly_service.R | 7 - R/rekognition_operations.R | 22 ++-- R/rekognition_service.R | 7 - R/sagemaker_operations.R | 2 R/sagemaker_service.R | 7 - R/sagemakerruntime_service.R | 7 - R/textract_service.R | 7 - R/transcribeservice_service.R | 7 - R/translate_service.R | 7 - man/comprehend.Rd | 4 man/comprehendmedical.Rd | 4 man/lexmodelbuildingservice.Rd | 4 man/lexmodelbuildingservice_get_bot.Rd | 4 man/lexmodelbuildingservice_get_bots.Rd | 4 man/lexmodelbuildingservice_get_intent.Rd | 4 man/lexmodelbuildingservice_get_intents.Rd | 4 man/lexmodelbuildingservice_get_slot_type.Rd | 4 man/lexmodelbuildingservice_get_slot_types.Rd | 4 man/lexmodelbuildingservice_put_bot.Rd | 4 man/lexmodelbuildingservice_put_intent.Rd | 30 +++--- man/lexmodelbuildingservice_put_slot_type.Rd | 4 man/lexruntimeservice.Rd | 4 man/machinelearning.Rd | 4 man/personalize.Rd | 4 man/personalizeevents.Rd | 4 man/personalizeruntime.Rd | 4 man/polly.Rd | 4 man/polly_delete_lexicon.Rd | 4 man/polly_describe_voices.Rd | 4 man/polly_get_lexicon.Rd | 4 man/polly_list_lexicons.Rd | 4 man/polly_put_lexicon.Rd | 4 man/polly_synthesize_speech.Rd | 4 man/rekognition.Rd | 4 man/rekognition_compare_faces.Rd | 4 man/rekognition_create_collection.Rd | 4 man/rekognition_delete_collection.Rd | 4 man/rekognition_delete_faces.Rd | 4 man/rekognition_detect_faces.Rd | 4 man/rekognition_detect_labels.Rd | 4 man/rekognition_index_faces.Rd | 4 man/rekognition_list_collections.Rd | 4 man/rekognition_list_faces.Rd | 4 man/rekognition_search_faces.Rd | 4 man/rekognition_search_faces_by_image.Rd | 4 man/sagemaker.Rd | 4 man/sagemakerruntime.Rd | 4 man/textract.Rd | 4 man/transcribeservice.Rd | 4 man/translate.Rd | 4 man/translate_start_text_translation_job.Rd | 2 63 files changed, 247 insertions(+), 262 deletions(-)
More information about paws.machine.learning at CRAN
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Title: Amazon Web Services Application Integration APIs
Description: Interface to Amazon Web Services application integration
APIs, including 'Simple Queue Service' ('SQS') message queue, 'Simple
Notification Service' ('SNS') publish/subscribe messaging, and more
<https://aws.amazon.com/>.
Author: David Kretch [aut, cre],
Adam Banker [aut],
Amazon.com, Inc. [cph]
Maintainer: David Kretch <david.kretch@gmail.com>
Diff between paws.application.integration versions 0.1.6 dated 2020-01-12 and 0.1.7 dated 2020-03-29
DESCRIPTION | 8 ++-- MD5 | 56 ++++++++++++++--------------- R/eventbridge_operations.R | 8 ++-- R/eventbridge_service.R | 7 +-- R/mq_service.R | 7 +-- R/sfn_operations.R | 16 ++++---- R/sfn_service.R | 7 +-- R/sns_operations.R | 2 - R/sns_service.R | 7 +-- R/sqs_operations.R | 6 +-- R/sqs_service.R | 7 +-- R/swf_operations.R | 4 +- R/swf_service.R | 7 +-- man/eventbridge.Rd | 4 +- man/eventbridge_put_permission.Rd | 8 ++-- man/mq.Rd | 4 +- man/mq_create_broker.Rd | 2 - man/mq_describe_broker_instance_options.Rd | 2 - man/mq_update_broker.Rd | 2 - man/sfn.Rd | 4 +- man/sfn_create_activity.Rd | 2 - man/sfn_create_state_machine.Rd | 2 - man/sfn_start_execution.Rd | 2 - man/sns.Rd | 4 +- man/sns_set_sms_attributes.Rd | 2 - man/sqs.Rd | 2 - man/sqs_receive_message.Rd | 2 - man/sqs_send_message.Rd | 4 +- man/swf.Rd | 4 +- 29 files changed, 93 insertions(+), 99 deletions(-)
More information about paws.application.integration at CRAN
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Title: Collection of Utility and Convenience Functions
Description: A collection of various utility and convenience functions.
Author: Ari B. Friedman
Maintainer: Ari B. Friedman <abfriedman@gmail.com>
Diff between taRifx versions 1.0.6.1 dated 2018-07-29 and 1.0.6.2 dated 2020-03-29
DESCRIPTION | 6 +++--- MD5 | 4 ++-- man/bytable.Rd | 2 -- 3 files changed, 5 insertions(+), 7 deletions(-)
Title: Project Multidimensional Data in 2D Space
Description: An implementation of the radviz projection in R. It enables the visualization of
multidimensional data while maintaining the relation to the original dimensions.
This package provides functions to create and plot radviz projections, and a number of summary
plots that enable comparison and analysis. For reference see Ankerst *et al.* (1996)
(<http://citeseer.ist.psu.edu/viewdoc/summary?doi=10.1.1.68.1811>) for original implementation,
see Di Caro *et al* (2012) (<http://link.springer.com/chapter/10.1007/978-3-642-13672-6_13>)
for the original method for dimensional anchor arrangements, see Demsar *et al.* (2007)
(<doi:10.1016/j.jbi.2007.03.010>) for the original Freeviz implementation.
Author: Yann Abraham [aut, cre],
Nicolas Sauwen [aut]
Maintainer: Yann Abraham <yann.abraham@gmail.com>
Diff between Radviz versions 0.9.0 dated 2020-03-19 and 0.9.1 dated 2020-03-29
DESCRIPTION | 8 - MD5 | 32 ++-- NEWS.md | 7 R/do.radviz.R | 4 R/plot.radviz.R | 33 +++- R/rescalePlot.R | 67 +++----- inst/doc/multivariate_analysis.R | 14 + inst/doc/multivariate_analysis.Rmd | 23 ++ inst/doc/multivariate_analysis.html | 272 +++++++++++++++++----------------- inst/doc/single_cell_projections.html | 120 +++++++-------- man/do.radviz.Rd | 1 man/plot.radviz.Rd | 7 man/rescalePlot.Rd | 5 src/FreeViz.cpp | 32 ++-- src/FreeViz2.cpp | 36 ++-- src/GraphViz.cpp | 39 ++-- vignettes/multivariate_analysis.Rmd | 23 ++ 17 files changed, 409 insertions(+), 314 deletions(-)
Title: Generic Coordinate System Transformations Using 'PROJ'
Description: A wrapper around the generic coordinate transformation software 'PROJ'
that transforms geospatial coordinates from one coordinate reference system ('CRS')
to another. This includes cartographic projections as well as geodetic transformations.
Version 6.0.0 or higher is required, earlier versions if available are not used
leaving this package harmlessly non-functional. The intention is for this package
to be used by user-packages such as 'reproj', and that the older 'PROJ.4' and version 5
pathways be provided by the 'proj4' package. Separating this disruptive version
change (from 4.0 and 5.0, to 6.0 and above) allows the use of existing and
stable code in 'proj4' alongside the new idioms and requirements of modern 'PROJ'
using this package. The 'PROJ' library is available from <https://proj.org/>.
Author: Michael D. Sumner [aut, cre] (<https://orcid.org/0000-0002-2471-7511>),
Jeroen Ooms [ctb] (provided PROJ library support on Windows, and
assistance with Windows configuration),
Simon Urbanek [cph, ctb] (wrote original code versions for PROJ version
6)
Maintainer: Michael D. Sumner <mdsumner@gmail.com>
Diff between PROJ versions 0.1.0 dated 2020-01-07 and 0.1.5 dated 2020-03-29
DESCRIPTION | 26 +++++---- MD5 | 44 ++++++++-------- NAMESPACE | 1 NEWS.md | 7 ++ R/PROJ-package.R | 3 - R/ok_proj6.R | 13 ++++ R/proj_create.R |only R/proj_trans_generic.R | 6 +- R/reproj_PROJ.R | 2 README.md | 99 +++++++++++++++++++++++++----------- build/vignette.rds |binary inst/WORDLIST | 5 + inst/doc/PROJ.Rmd | 17 +++++- inst/doc/PROJ.html | 53 +++++++++++-------- man/PROJ-package.Rd | 15 +++-- man/proj_create.Rd |only src/C_proj_create.c |only src/C_proj_trans_generic.c | 63 ++++++++++++---------- src/C_set_data_dir.c | 5 - src/init.c | 8 +- tests/testthat/test-PROJ.R | 5 + tests/testthat/test-create.R |only tests/testthat/test-sanity-inputs.R | 8 +- vignettes/PROJ.Rmd | 17 +++++- vignettes/PROJ.Rmd.orig | 5 + 25 files changed, 263 insertions(+), 139 deletions(-)
Title: Amazon Web Services Analytics APIs
Description: Interface to Amazon Web Services analytics APIs, including
'Elastic MapReduce' 'Hadoop' and 'Spark' big data service,
'Elasticsearch' search engine, and more <https://aws.amazon.com/>.
Author: David Kretch [aut, cre],
Adam Banker [aut],
Amazon.com, Inc. [cph]
Maintainer: David Kretch <david.kretch@gmail.com>
Diff between paws.analytics versions 0.1.6 dated 2020-01-12 and 0.1.7 dated 2020-03-29
DESCRIPTION | 8 +-- MD5 | 74 ++++++++++++++++++------------------ R/athena_operations.R | 2 R/athena_service.R | 7 +-- R/cloudsearch_service.R | 7 +-- R/cloudsearchdomain_operations.R | 8 +-- R/cloudsearchdomain_service.R | 7 +-- R/datapipeline_service.R | 7 +-- R/elasticsearchservice_service.R | 7 +-- R/emr_service.R | 7 +-- R/firehose_service.R | 7 +-- R/glue_operations.R | 56 +++++++++++++-------------- R/glue_service.R | 7 +-- R/kafka_operations.R | 2 R/kafka_service.R | 7 +-- R/kinesis_service.R | 7 +-- R/kinesisanalytics_service.R | 7 +-- R/kinesisanalyticsv2_service.R | 7 +-- R/mturk_service.R | 7 +-- R/quicksight_service.R | 7 +-- man/athena.Rd | 4 - man/athena_list_query_executions.Rd | 2 man/athena_start_query_execution.Rd | 2 man/cloudsearch.Rd | 4 - man/cloudsearchdomain.Rd | 4 - man/cloudsearchdomain_search.Rd | 8 +-- man/datapipeline.Rd | 4 - man/elasticsearchservice.Rd | 4 - man/emr.Rd | 4 - man/firehose.Rd | 4 - man/glue.Rd | 4 - man/glue_get_partitions.Rd | 58 ++++++++++++++++------------ man/kafka.Rd | 4 - man/kinesis.Rd | 4 - man/kinesisanalytics.Rd | 4 - man/kinesisanalyticsv2.Rd | 4 - man/mturk.Rd | 4 - man/quicksight.Rd | 4 - 38 files changed, 184 insertions(+), 190 deletions(-)
More information about paws.analytics at CRAN
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Title: Parse Messy Geographic Coordinates
Description: Parse geographic coordinates from various formats
to decimal degree numeric values. Parse coordinates into
their parts (degree, minutes, seconds); calculate hemisphere
from coordinates; pull out individually degrees,
minutes, or seconds; add and subtract degrees, minutes,
and seconds. C++ code herein originally inspired from code
written by Jeffrey D. Bogan (<http://bit.ly/CLongLatString>),
but then completely re-written.
Author: Scott Chamberlain [aut, cre] (<https://orcid.org/0000-0003-1444-9135>),
Jeffrey Bogan [ctb] (C++ code originally from Jeffrey Bogan, but
completely re-written),
Julien Brun [rev] (Julien Brun reviewed the package, see
https://github.com/ropensci/onboarding/issues/341),
Maria Munafó [rev] (Maria Munafó reviewed the package, see
https://github.com/ropensci/onboarding/issues/341),
rOpenSci [fnd] (https://ropensci.org)
Maintainer: Scott Chamberlain <sckott@protonmail.com>
Diff between parzer versions 0.1.0 dated 2020-03-19 and 0.1.4 dated 2020-03-29
parzer-0.1.0/parzer/inst/doc/parzer.R |only parzer-0.1.4/parzer/DESCRIPTION | 6 parzer-0.1.4/parzer/MD5 | 57 +++---- parzer-0.1.4/parzer/NEWS.md | 8 parzer-0.1.4/parzer/R/dms-fxns.R | 2 parzer-0.1.4/parzer/R/parse_hemisphere.R | 2 parzer-0.1.4/parzer/R/parse_lat.R | 2 parzer-0.1.4/parzer/R/parse_lat_lon.R | 2 parzer-0.1.4/parzer/R/parse_lon.R | 2 parzer-0.1.4/parzer/R/parse_parts.R | 3 parzer-0.1.4/parzer/R/zzz.R | 6 parzer-0.1.4/parzer/README.md | 10 - parzer-0.1.4/parzer/build/vignette.rds |binary parzer-0.1.4/parzer/inst/doc/parzer.Rmd | 105 ++++++++++--- parzer-0.1.4/parzer/inst/doc/parzer.html | 4 parzer-0.1.4/parzer/man/dms.Rd | 2 parzer-0.1.4/parzer/man/parse_hemisphere.Rd | 2 parzer-0.1.4/parzer/man/parse_lat.Rd | 2 parzer-0.1.4/parzer/man/parse_lon.Rd | 2 parzer-0.1.4/parzer/man/parse_lon_lat.Rd | 2 parzer-0.1.4/parzer/man/parse_parts.Rd | 3 parzer-0.1.4/parzer/src/pz_parse_parts.cpp | 3 parzer-0.1.4/parzer/tests/testthat/test-dms.R | 8 parzer-0.1.4/parzer/tests/testthat/test-parse_hemisphere.R | 2 parzer-0.1.4/parzer/tests/testthat/test-parse_lat.R | 4 parzer-0.1.4/parzer/tests/testthat/test-parse_lat_lon.R | 2 parzer-0.1.4/parzer/tests/testthat/test-parse_lon.R | 4 parzer-0.1.4/parzer/tests/testthat/test-parse_parts.R | 4 parzer-0.1.4/parzer/tests/testthat/test-utils.R |only parzer-0.1.4/parzer/vignettes/parzer.Rmd | 105 ++++++++++--- parzer-0.1.4/parzer/vignettes/parzer.Rmd.og |only 31 files changed, 271 insertions(+), 83 deletions(-)
Title: Create a Kaplan-Meier Plot with Numbers at Risk
Description: To add the table of numbers at risk below the Kaplan-Meier plot.
Author: Zhicheng Du, Yuantao Hao
Maintainer: Zhicheng Du<dgdzc@hotmail.com>
Diff between numKM versions 0.1.0 dated 2017-05-19 and 0.2.0 dated 2020-03-29
DESCRIPTION | 6 +++--- MD5 | 6 +++--- R/numKM.R | 9 +++++---- man/numKM.Rd | 9 +++++++-- 4 files changed, 18 insertions(+), 12 deletions(-)
Title: Extension for 'DALEX' Package
Description: Provides wrapper of various machine learning models.
In applied machine learning, there
is a strong belief that we need to strike a balance
between interpretability and accuracy.
However, in field of the interpretable machine learning,
there are more and more new ideas for explaining black-box models,
that are implemented in 'R'.
'DALEXtra' creates 'DALEX' Biecek (2018) <arXiv:1806.08915> explainer for many type of models
including those created using 'python' 'scikit-learn' and 'keras' libraries, 'java' 'h2o' library and
'mljar' API. Important part of the package is Champion-Challenger analysis and innovative approach
to model performance across subsets of test data presented in Funnel Plot.
Third branch of 'DALEXtra' package is aspect importance analysis
that provides instance-level explanations for the groups of explanatory variables.
Author: Szymon Maksymiuk [aut, cre] (<https://orcid.org/0000-0002-3120-1601>),
Przemyslaw Biecek [aut] (<https://orcid.org/0000-0001-8423-1823>),
Katarzyna Pekala [aut],
Anna Kozak [ctb]
Maintainer: Szymon Maksymiuk <sz.maksymiuk@gmail.com>
Diff between DALEXtra versions 0.2.0 dated 2019-11-18 and 0.2.1 dated 2020-03-29
DALEXtra-0.2.0/DALEXtra/man/explain_mljar.Rd |only DALEXtra-0.2.1/DALEXtra/DESCRIPTION | 18 - DALEXtra-0.2.1/DALEXtra/MD5 | 71 +++--- DALEXtra-0.2.1/DALEXtra/NAMESPACE | 7 DALEXtra-0.2.1/DALEXtra/NEWS.md | 7 DALEXtra-0.2.1/DALEXtra/R/aspect_importance.R | 21 - DALEXtra-0.2.1/DALEXtra/R/create_env.R | 4 DALEXtra-0.2.1/DALEXtra/R/explain_h2o.R | 10 DALEXtra-0.2.1/DALEXtra/R/explain_keras.R | 10 DALEXtra-0.2.1/DALEXtra/R/explain_mljar.R | 115 ++++------ DALEXtra-0.2.1/DALEXtra/R/explain_mlr.R | 9 DALEXtra-0.2.1/DALEXtra/R/explain_mlr3.R | 9 DALEXtra-0.2.1/DALEXtra/R/explain_scikitlearn.R | 14 - DALEXtra-0.2.1/DALEXtra/R/model_info.R | 50 ++-- DALEXtra-0.2.1/DALEXtra/R/plot.funnel_measure.R | 2 DALEXtra-0.2.1/DALEXtra/R/yhat.R | 63 +++-- DALEXtra-0.2.1/DALEXtra/inst/ChampionChallenger/DALEXtra_example_of_report.Rmd |only DALEXtra-0.2.1/DALEXtra/inst/ChampionChallenger/DALEXtra_example_of_report.html |only DALEXtra-0.2.1/DALEXtra/man/aspect_importance.Rd | 9 DALEXtra-0.2.1/DALEXtra/man/aspect_importance_single.Rd | 6 DALEXtra-0.2.1/DALEXtra/man/create_env.Rd | 4 DALEXtra-0.2.1/DALEXtra/man/explain_h2o.Rd | 7 DALEXtra-0.2.1/DALEXtra/man/explain_keras.Rd | 7 DALEXtra-0.2.1/DALEXtra/man/explain_mlr.Rd | 7 DALEXtra-0.2.1/DALEXtra/man/explain_mlr3.Rd | 7 DALEXtra-0.2.1/DALEXtra/man/explain_scikitlearn.Rd | 12 - DALEXtra-0.2.1/DALEXtra/man/model_info.Rd | 4 DALEXtra-0.2.1/DALEXtra/man/plot.aspect_importance.Rd | 6 DALEXtra-0.2.1/DALEXtra/man/print.scikitlearn_set.Rd | 30 +- DALEXtra-0.2.1/DALEXtra/man/yhat.Rd | 7 DALEXtra-0.2.1/DALEXtra/tests/testthat/helper-objects.R | 3 DALEXtra-0.2.1/DALEXtra/tests/testthat/objects_for_tests.R | 19 - DALEXtra-0.2.1/DALEXtra/tests/testthat/test_aspect_importance.R | 40 +-- DALEXtra-0.2.1/DALEXtra/tests/testthat/test_create_env.R | 6 DALEXtra-0.2.1/DALEXtra/tests/testthat/test_keras_explain.R | 34 +- DALEXtra-0.2.1/DALEXtra/tests/testthat/test_mljar_explain.R | 26 +- DALEXtra-0.2.1/DALEXtra/tests/testthat/test_scikitlearn_explain.R | 6 DALEXtra-0.2.1/DALEXtra/tests/testthat/tests_prints.R | 2 38 files changed, 345 insertions(+), 307 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-07-27 0.2.1
2016-07-24 0.1.2
2016-06-15 0.1.1
2016-06-13 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-01-24 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-07-22 1.1.0
2016-11-11 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-01-02 0.1.7
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-04-26 3.3
2019-04-24 3.2
2018-07-12 3.1
2018-07-05 3.0
2017-08-03 2.4
2017-04-26 2.3
2017-03-24 2.2
2016-10-18 2.1
2016-10-07 2.0
2015-09-11 1.07
2014-11-26 1.06
2014-07-09 1.05
2013-06-09 1.04
2013-01-15 1.03
2012-10-12 1.02
2012-03-19 1.01
2012-02-08 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-05-05 1.2.0
2019-03-07 1.1.2
2017-10-11 1.1.1
2017-09-06 1.1.0
2015-09-21 1.0.2
2015-02-22 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-11-26 2.4
2018-04-25 2.3.1
2017-12-01 2.3
2017-03-17 2.1
2016-08-14 2.0
2013-05-21 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-07-31 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-09-13 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-09-28 1.0.1
2017-05-31 1.0.0
Title: A Framework for Data-Driven Stochastic Disease Spread
Simulations
Description: Provides an efficient and very flexible framework to
conduct data-driven epidemiological modeling in realistic large
scale disease spread simulations. The framework integrates
infection dynamics in subpopulations as continuous-time Markov
chains using the Gillespie stochastic simulation algorithm and
incorporates available data such as births, deaths and movements
as scheduled events at predefined time-points. Using C code for
the numerical solvers and 'OpenMP' (if available) to divide work
over multiple processors ensures high performance when simulating
a sample outcome. One of our design goals was to make the package
extendable and enable usage of the numerical solvers from other R
extension packages in order to facilitate complex epidemiological
research. The package contains template models and can be extended
with user-defined models. For more details see the paper by
Widgren, Bauer, Eriksson and Engblom (2019)
<doi:10.18637/jss.v091.i12>.
Author: Stefan Widgren [aut, cre] (<https://orcid.org/0000-0001-5745-2284>),
Robin Eriksson [aut] (<https://orcid.org/0000-0002-4291-712X>),
Stefan Engblom [aut] (<https://orcid.org/0000-0002-3614-1732>),
Pavol Bauer [aut] (<https://orcid.org/0000-0003-4328-7171>),
Attractive Chaos [cph] (Author of 'kbtree.h' and 'kvec.h'.)
Maintainer: Stefan Widgren <stefan.widgren@gmail.com>
Diff between SimInf versions 6.4.0 dated 2019-11-11 and 6.5.0 dated 2020-03-29
SimInf-6.4.0/SimInf/src/solvers/kvec.h |only SimInf-6.5.0/SimInf/DESCRIPTION | 14 SimInf-6.5.0/SimInf/MD5 | 234 SimInf-6.5.0/SimInf/NAMESPACE | 3 SimInf-6.5.0/SimInf/NEWS.md | 51 SimInf-6.5.0/SimInf/R/SEIR.R | 38 SimInf-6.5.0/SimInf/R/SIR.R | 32 SimInf-6.5.0/SimInf/R/SISe.R | 74 SimInf-6.5.0/SimInf/R/SISe3.R | 76 SimInf-6.5.0/SimInf/R/SISe3_sp.R | 89 SimInf-6.5.0/SimInf/R/SISe_sp.R | 69 SimInf-6.5.0/SimInf/R/SimInf.R | 30 SimInf-6.5.0/SimInf/R/SimInf_events.R | 450 - SimInf-6.5.0/SimInf/R/SimInf_model.R | 438 - SimInf-6.5.0/SimInf/R/check_arguments.R | 179 SimInf-6.5.0/SimInf/R/degree.R | 73 SimInf-6.5.0/SimInf/R/distance.R | 36 SimInf-6.5.0/SimInf/R/mparse.R | 146 SimInf-6.5.0/SimInf/R/openmp.R |only SimInf-6.5.0/SimInf/R/package_skeleton.R | 318 - SimInf-6.5.0/SimInf/R/plot.R | 234 SimInf-6.5.0/SimInf/R/prevalence.R | 51 SimInf-6.5.0/SimInf/R/print.R | 150 SimInf-6.5.0/SimInf/R/punchcard.R | 166 SimInf-6.5.0/SimInf/R/run.R | 43 SimInf-6.5.0/SimInf/R/run_outer.R | 65 SimInf-6.5.0/SimInf/R/trajectory.R | 285 - SimInf-6.5.0/SimInf/README.md | 181 SimInf-6.5.0/SimInf/build/vignette.rds |binary SimInf-6.5.0/SimInf/configure.ac | 16 SimInf-6.5.0/SimInf/data/nodes.rda |binary SimInf-6.5.0/SimInf/inst/doc/SimInf.R | 41 SimInf-6.5.0/SimInf/inst/doc/SimInf.Rnw | 79 SimInf-6.5.0/SimInf/inst/doc/SimInf.pdf |binary SimInf-6.5.0/SimInf/inst/include/SimInf.h | 33 SimInf-6.5.0/SimInf/man/SEIR.Rd | 8 SimInf-6.5.0/SimInf/man/SIR-class.Rd | 3 SimInf-6.5.0/SimInf/man/SIR.Rd | 5 SimInf-6.5.0/SimInf/man/SISe.Rd | 62 SimInf-6.5.0/SimInf/man/SISe3.Rd | 81 SimInf-6.5.0/SimInf/man/SISe3_sp.Rd | 91 SimInf-6.5.0/SimInf/man/SISe_sp.Rd | 65 SimInf-6.5.0/SimInf/man/SimInf.Rd | 1 SimInf-6.5.0/SimInf/man/SimInf_events-class.Rd | 142 SimInf-6.5.0/SimInf/man/SimInf_model-class.Rd | 146 SimInf-6.5.0/SimInf/man/SimInf_model.Rd | 30 SimInf-6.5.0/SimInf/man/as.data.frame.SimInf_events.Rd |only SimInf-6.5.0/SimInf/man/boxplot-SimInf_model-method.Rd | 3 SimInf-6.5.0/SimInf/man/events_SEIR.Rd | 2 SimInf-6.5.0/SimInf/man/events_SIR.Rd | 2 SimInf-6.5.0/SimInf/man/events_SISe.Rd | 2 SimInf-6.5.0/SimInf/man/events_SISe3.Rd | 2 SimInf-6.5.0/SimInf/man/mparse.Rd | 30 SimInf-6.5.0/SimInf/man/nodes.Rd | 2 SimInf-6.5.0/SimInf/man/package_skeleton.Rd | 11 SimInf-6.5.0/SimInf/man/pairs-SimInf_model-method.Rd | 3 SimInf-6.5.0/SimInf/man/plot-SimInf_events-method.Rd | 1 SimInf-6.5.0/SimInf/man/plot.Rd | 30 SimInf-6.5.0/SimInf/man/prevalence.Rd | 11 SimInf-6.5.0/SimInf/man/punchcard-set.Rd | 12 SimInf-6.5.0/SimInf/man/run.Rd | 6 SimInf-6.5.0/SimInf/man/run_outer.Rd | 10 SimInf-6.5.0/SimInf/man/set_num_threads.Rd |only SimInf-6.5.0/SimInf/man/show-SimInf_events-method.Rd | 1 SimInf-6.5.0/SimInf/man/show-SimInf_model-method.Rd | 3 SimInf-6.5.0/SimInf/man/summary-SimInf_events-method.Rd | 1 SimInf-6.5.0/SimInf/man/summary-SimInf_model-method.Rd | 1 SimInf-6.5.0/SimInf/man/trajectory.Rd | 4 SimInf-6.5.0/SimInf/man/u0_SEIR.Rd | 2 SimInf-6.5.0/SimInf/man/u0_SIR.Rd | 2 SimInf-6.5.0/SimInf/man/u0_SISe.Rd | 2 SimInf-6.5.0/SimInf/man/u0_SISe3.Rd | 2 SimInf-6.5.0/SimInf/src/Makevars.in | 2 SimInf-6.5.0/SimInf/src/Makevars.win | 2 SimInf-6.5.0/SimInf/src/SimInf.c | 139 SimInf-6.5.0/SimInf/src/SimInf.h | 33 SimInf-6.5.0/SimInf/src/init.c | 52 SimInf-6.5.0/SimInf/src/misc/SimInf_arg.c | 78 SimInf-6.5.0/SimInf/src/misc/SimInf_arg.h | 33 SimInf-6.5.0/SimInf/src/misc/SimInf_forward_euler_linear_decay.c | 31 SimInf-6.5.0/SimInf/src/misc/SimInf_forward_euler_linear_decay.h | 31 SimInf-6.5.0/SimInf/src/misc/SimInf_ldata.c | 43 SimInf-6.5.0/SimInf/src/misc/SimInf_local_spread.c | 30 SimInf-6.5.0/SimInf/src/misc/SimInf_local_spread.h | 30 SimInf-6.5.0/SimInf/src/misc/SimInf_openmp.c |only SimInf-6.5.0/SimInf/src/misc/SimInf_openmp.h |only SimInf-6.5.0/SimInf/src/misc/SimInf_trajectory.c |only SimInf-6.5.0/SimInf/src/misc/kbtree.h |only SimInf-6.5.0/SimInf/src/misc/kvec.h |only SimInf-6.5.0/SimInf/src/models/SEIR.c | 32 SimInf-6.5.0/SimInf/src/models/SIR.c | 32 SimInf-6.5.0/SimInf/src/models/SISe.c | 38 SimInf-6.5.0/SimInf/src/models/SISe3.c | 38 SimInf-6.5.0/SimInf/src/models/SISe3_sp.c | 37 SimInf-6.5.0/SimInf/src/models/SISe_sp.c | 37 SimInf-6.5.0/SimInf/src/solvers/SimInf_solver.c | 42 SimInf-6.5.0/SimInf/src/solvers/SimInf_solver.h | 32 SimInf-6.5.0/SimInf/src/solvers/aem/SimInf_solver_aem.c | 56 SimInf-6.5.0/SimInf/src/solvers/aem/SimInf_solver_aem.h | 32 SimInf-6.5.0/SimInf/src/solvers/ssm/SimInf_solver_ssm.c | 49 SimInf-6.5.0/SimInf/src/solvers/ssm/SimInf_solver_ssm.h | 32 SimInf-6.5.0/SimInf/tests/SEIR.R | 342 - SimInf-6.5.0/SimInf/tests/SIR.R | 451 + SimInf-6.5.0/SimInf/tests/SISe.R | 1775 +++--- SimInf-6.5.0/SimInf/tests/SISe3.R | 2464 ++++----- SimInf-6.5.0/SimInf/tests/SISe3_sp.R | 2725 ++++------ SimInf-6.5.0/SimInf/tests/SISe_sp.R | 1779 +++--- SimInf-6.5.0/SimInf/tests/SimInf.R | 388 - SimInf-6.5.0/SimInf/tests/SimInf_events.R | 388 - SimInf-6.5.0/SimInf/tests/SimInf_model.R | 770 +- SimInf-6.5.0/SimInf/tests/ldata_sp.R | 136 SimInf-6.5.0/SimInf/tests/measures.R | 206 SimInf-6.5.0/SimInf/tests/mparse.R | 469 + SimInf-6.5.0/SimInf/tests/package_skeleton.R | 36 SimInf-6.5.0/SimInf/tests/phi.R | 158 SimInf-6.5.0/SimInf/tests/prevalence.R | 78 SimInf-6.5.0/SimInf/tests/punchcard.R | 298 - SimInf-6.5.0/SimInf/tests/run_outer.R | 118 SimInf-6.5.0/SimInf/tests/sample_select.R | 576 -- SimInf-6.5.0/SimInf/tests/solver_aem.R | 141 SimInf-6.5.0/SimInf/tests/util |only SimInf-6.5.0/SimInf/vignettes/SimInf.Rnw | 79 SimInf-6.5.0/SimInf/vignettes/SimInf.bib | 11 123 files changed, 9657 insertions(+), 9165 deletions(-)
Title: Amazon Web Services Storage APIs
Description: Interface to Amazon Web Services storage APIs, including
'Simple Storage Service' ('S3') and more <https://aws.amazon.com/>.
Author: David Kretch [aut, cre],
Adam Banker [aut],
Amazon.com, Inc. [cph]
Maintainer: David Kretch <david.kretch@gmail.com>
Diff between paws.storage versions 0.1.6 dated 2020-01-14 and 0.1.7 dated 2020-03-29
DESCRIPTION | 8 MD5 | 376 ++-- R/backup_service.R | 7 R/dlm_service.R | 7 R/efs_operations.R | 26 R/efs_service.R | 7 R/fsx_operations.R | 22 R/fsx_service.R | 7 R/glacier_operations.R | 70 R/glacier_service.R | 7 R/s3_operations.R | 897 ++++------ R/s3_service.R | 7 R/s3control_service.R | 7 R/storagegateway_operations.R | 152 - R/storagegateway_service.R | 7 man/backup.Rd | 4 man/dlm.Rd | 4 man/efs.Rd | 4 man/efs_create_file_system.Rd | 4 man/efs_create_mount_target.Rd | 4 man/efs_create_tags.Rd | 4 man/efs_delete_file_system.Rd | 4 man/efs_delete_mount_target.Rd | 4 man/efs_delete_tags.Rd | 4 man/efs_describe_file_systems.Rd | 4 man/efs_describe_lifecycle_configuration.Rd | 4 man/efs_describe_mount_target_security_groups.Rd | 4 man/efs_describe_mount_targets.Rd | 4 man/efs_describe_tags.Rd | 4 man/efs_modify_mount_target_security_groups.Rd | 4 man/efs_put_lifecycle_configuration.Rd | 4 man/fsx.Rd | 4 man/fsx_create_backup.Rd | 4 man/fsx_create_file_system.Rd | 4 man/fsx_create_file_system_from_backup.Rd | 4 man/fsx_delete_backup.Rd | 4 man/fsx_delete_file_system.Rd | 4 man/fsx_describe_backups.Rd | 4 man/fsx_describe_file_systems.Rd | 4 man/fsx_list_tags_for_resource.Rd | 4 man/fsx_tag_resource.Rd | 4 man/fsx_untag_resource.Rd | 4 man/fsx_update_file_system.Rd | 4 man/glacier.Rd | 4 man/glacier_abort_multipart_upload.Rd | 4 man/glacier_abort_vault_lock.Rd | 4 man/glacier_add_tags_to_vault.Rd | 4 man/glacier_complete_multipart_upload.Rd | 4 man/glacier_complete_vault_lock.Rd | 4 man/glacier_create_vault.Rd | 4 man/glacier_delete_archive.Rd | 4 man/glacier_delete_vault.Rd | 4 man/glacier_delete_vault_access_policy.Rd | 4 man/glacier_delete_vault_notifications.Rd | 4 man/glacier_describe_job.Rd | 4 man/glacier_describe_vault.Rd | 4 man/glacier_get_data_retrieval_policy.Rd | 4 man/glacier_get_job_output.Rd | 4 man/glacier_get_vault_access_policy.Rd | 4 man/glacier_get_vault_lock.Rd | 4 man/glacier_get_vault_notifications.Rd | 4 man/glacier_initiate_job.Rd | 4 man/glacier_initiate_multipart_upload.Rd | 4 man/glacier_initiate_vault_lock.Rd | 6 man/glacier_list_jobs.Rd | 4 man/glacier_list_multipart_uploads.Rd | 4 man/glacier_list_parts.Rd | 4 man/glacier_list_provisioned_capacity.Rd | 4 man/glacier_list_tags_for_vault.Rd | 4 man/glacier_list_vaults.Rd | 4 man/glacier_purchase_provisioned_capacity.Rd | 4 man/glacier_remove_tags_from_vault.Rd | 4 man/glacier_set_data_retrieval_policy.Rd | 4 man/glacier_set_vault_access_policy.Rd | 6 man/glacier_set_vault_notifications.Rd | 4 man/glacier_upload_archive.Rd | 4 man/glacier_upload_multipart_part.Rd | 2 man/s3.Rd | 4 man/s3_abort_multipart_upload.Rd | 4 man/s3_complete_multipart_upload.Rd | 4 man/s3_copy_object.Rd | 245 +- man/s3_create_bucket.Rd | 6 man/s3_create_multipart_upload.Rd | 202 +- man/s3_delete_bucket.Rd | 4 man/s3_delete_bucket_cors.Rd | 4 man/s3_delete_bucket_lifecycle.Rd | 4 man/s3_delete_bucket_policy.Rd | 4 man/s3_delete_bucket_replication.Rd | 4 man/s3_delete_bucket_tagging.Rd | 4 man/s3_delete_bucket_website.Rd | 4 man/s3_delete_object.Rd | 6 man/s3_delete_object_tagging.Rd | 6 man/s3_delete_objects.Rd | 6 man/s3_get_bucket_cors.Rd | 4 man/s3_get_bucket_lifecycle.Rd | 4 man/s3_get_bucket_lifecycle_configuration.Rd | 4 man/s3_get_bucket_location.Rd | 4 man/s3_get_bucket_notification.Rd | 6 man/s3_get_bucket_policy.Rd | 4 man/s3_get_bucket_replication.Rd | 4 man/s3_get_bucket_request_payment.Rd | 4 man/s3_get_bucket_tagging.Rd | 4 man/s3_get_bucket_versioning.Rd | 4 man/s3_get_bucket_website.Rd | 4 man/s3_get_object.Rd | 6 man/s3_get_object_acl.Rd | 4 man/s3_get_object_tagging.Rd | 6 man/s3_get_object_torrent.Rd | 4 man/s3_head_bucket.Rd | 4 man/s3_head_object.Rd | 4 man/s3_list_buckets.Rd | 4 man/s3_list_multipart_uploads.Rd | 6 man/s3_list_object_versions.Rd | 4 man/s3_list_objects.Rd | 4 man/s3_list_objects_v2.Rd | 4 man/s3_list_parts.Rd | 4 man/s3_put_bucket_acl.Rd | 2 man/s3_put_bucket_cors.Rd | 4 man/s3_put_bucket_lifecycle_configuration.Rd | 4 man/s3_put_bucket_logging.Rd | 4 man/s3_put_bucket_notification_configuration.Rd | 4 man/s3_put_bucket_policy.Rd | 6 man/s3_put_bucket_replication.Rd | 4 man/s3_put_bucket_request_payment.Rd | 4 man/s3_put_bucket_tagging.Rd | 4 man/s3_put_bucket_versioning.Rd | 4 man/s3_put_bucket_website.Rd | 4 man/s3_put_object.Rd | 353 +-- man/s3_put_object_acl.Rd | 4 man/s3_put_object_tagging.Rd | 4 man/s3_restore_object.Rd | 4 man/s3_upload_part.Rd | 4 man/s3_upload_part_copy.Rd | 6 man/s3control.Rd | 4 man/storagegateway.Rd | 4 man/storagegateway_activate_gateway.Rd | 4 man/storagegateway_add_cache.Rd | 4 man/storagegateway_add_tags_to_resource.Rd | 4 man/storagegateway_add_upload_buffer.Rd | 4 man/storagegateway_add_working_storage.Rd | 4 man/storagegateway_cancel_archival.Rd | 4 man/storagegateway_cancel_retrieval.Rd | 4 man/storagegateway_create_cachedi_scsi_volume.Rd | 4 man/storagegateway_create_snapshot.Rd | 4 man/storagegateway_create_snapshot_from_volume_recovery_point.Rd | 4 man/storagegateway_create_storedi_scsi_volume.Rd | 4 man/storagegateway_create_tape_with_barcode.Rd | 2 man/storagegateway_create_tapes.Rd | 2 man/storagegateway_delete_bandwidth_rate_limit.Rd | 4 man/storagegateway_delete_chap_credentials.Rd | 4 man/storagegateway_delete_gateway.Rd | 4 man/storagegateway_delete_snapshot_schedule.Rd | 4 man/storagegateway_delete_tape.Rd | 4 man/storagegateway_delete_tape_archive.Rd | 4 man/storagegateway_delete_volume.Rd | 4 man/storagegateway_describe_bandwidth_rate_limit.Rd | 4 man/storagegateway_describe_cache.Rd | 4 man/storagegateway_describe_cachedi_scsi_volumes.Rd | 4 man/storagegateway_describe_chap_credentials.Rd | 4 man/storagegateway_describe_gateway_information.Rd | 4 man/storagegateway_describe_maintenance_start_time.Rd | 4 man/storagegateway_describe_snapshot_schedule.Rd | 4 man/storagegateway_describe_storedi_scsi_volumes.Rd | 4 man/storagegateway_describe_tape_archives.Rd | 4 man/storagegateway_describe_tape_recovery_points.Rd | 4 man/storagegateway_describe_tapes.Rd | 4 man/storagegateway_describe_upload_buffer.Rd | 6 man/storagegateway_describe_vtl_devices.Rd | 4 man/storagegateway_describe_working_storage.Rd | 4 man/storagegateway_disable_gateway.Rd | 4 man/storagegateway_list_gateways.Rd | 4 man/storagegateway_list_local_disks.Rd | 4 man/storagegateway_list_tags_for_resource.Rd | 4 man/storagegateway_list_volume_recovery_points.Rd | 4 man/storagegateway_list_volumes.Rd | 4 man/storagegateway_remove_tags_from_resource.Rd | 4 man/storagegateway_reset_cache.Rd | 4 man/storagegateway_retrieve_tape_archive.Rd | 4 man/storagegateway_retrieve_tape_recovery_point.Rd | 4 man/storagegateway_set_local_console_password.Rd | 4 man/storagegateway_shutdown_gateway.Rd | 4 man/storagegateway_start_gateway.Rd | 4 man/storagegateway_update_bandwidth_rate_limit.Rd | 4 man/storagegateway_update_chap_credentials.Rd | 4 man/storagegateway_update_gateway_information.Rd | 4 man/storagegateway_update_gateway_software_now.Rd | 4 man/storagegateway_update_maintenance_start_time.Rd | 4 man/storagegateway_update_snapshot_schedule.Rd | 4 man/storagegateway_update_vtl_device_type.Rd | 4 189 files changed, 1518 insertions(+), 1591 deletions(-)
Title: Amazon Web Services Networking & Content Delivery APIs
Description: Interface to Amazon Web Services networking and content
delivery APIs, including 'Route 53' Domain Name System service,
'CloudFront' content delivery, load balancing, and more
<https://aws.amazon.com/>.
Author: David Kretch [aut, cre],
Adam Banker [aut],
Amazon.com, Inc. [cph]
Maintainer: David Kretch <david.kretch@gmail.com>
Diff between paws.networking versions 0.1.6 dated 2020-01-14 and 0.1.7 dated 2020-03-29
DESCRIPTION | 8 MD5 | 194 ++++++------ R/apigateway_service.R | 7 R/apigatewaymanagementapi_service.R | 7 R/apigatewayv2_service.R | 7 R/appmesh_service.R | 7 R/cloudfront_service.R | 7 R/directconnect_service.R | 7 R/elb_operations.R | 72 ++-- R/elb_service.R | 7 R/elbv2_operations.R | 72 ++-- R/elbv2_service.R | 7 R/globalaccelerator_service.R | 122 +++---- R/route53_operations.R | 236 +++++++-------- R/route53_service.R | 7 R/route53domains_service.R | 7 R/route53resolver_service.R | 7 R/servicediscovery_service.R | 7 man/apigateway.Rd | 4 man/apigatewaymanagementapi.Rd | 4 man/apigatewayv2.Rd | 4 man/apigatewayv2_create_api.Rd | 2 man/apigatewayv2_create_integration.Rd | 2 man/apigatewayv2_update_api.Rd | 2 man/apigatewayv2_update_integration.Rd | 2 man/appmesh.Rd | 4 man/cloudfront.Rd | 4 man/directconnect.Rd | 4 man/elb.Rd | 4 man/elb_add_tags.Rd | 4 man/elb_apply_security_groups_to_load_balancer.Rd | 4 man/elb_attach_load_balancer_to_subnets.Rd | 4 man/elb_configure_health_check.Rd | 4 man/elb_create_app_cookie_stickiness_policy.Rd | 4 man/elb_create_lb_cookie_stickiness_policy.Rd | 4 man/elb_create_load_balancer.Rd | 12 man/elb_create_load_balancer_listeners.Rd | 6 man/elb_create_load_balancer_policy.Rd | 8 man/elb_delete_load_balancer.Rd | 4 man/elb_delete_load_balancer_listeners.Rd | 4 man/elb_delete_load_balancer_policy.Rd | 4 man/elb_deregister_instances_from_load_balancer.Rd | 4 man/elb_describe_instance_health.Rd | 4 man/elb_describe_load_balancer_attributes.Rd | 4 man/elb_describe_load_balancer_policies.Rd | 4 man/elb_describe_load_balancer_policy_types.Rd | 4 man/elb_describe_load_balancers.Rd | 4 man/elb_describe_tags.Rd | 4 man/elb_detach_load_balancer_from_subnets.Rd | 4 man/elb_disable_availability_zones_for_load_balancer.Rd | 4 man/elb_enable_availability_zones_for_load_balancer.Rd | 4 man/elb_modify_load_balancer_attributes.Rd | 6 man/elb_register_instances_with_load_balancer.Rd | 4 man/elb_remove_tags.Rd | 4 man/elb_set_load_balancer_listener_ssl_certificate.Rd | 4 man/elb_set_load_balancer_policies_for_backend_server.Rd | 4 man/elb_set_load_balancer_policies_of_listener.Rd | 4 man/elbv2.Rd | 4 man/elbv2_add_tags.Rd | 4 man/elbv2_create_listener.Rd | 6 man/elbv2_create_load_balancer.Rd | 6 man/elbv2_create_rule.Rd | 4 man/elbv2_create_target_group.Rd | 4 man/elbv2_delete_listener.Rd | 4 man/elbv2_delete_load_balancer.Rd | 4 man/elbv2_delete_rule.Rd | 4 man/elbv2_delete_target_group.Rd | 4 man/elbv2_deregister_targets.Rd | 4 man/elbv2_describe_listeners.Rd | 4 man/elbv2_describe_load_balancer_attributes.Rd | 4 man/elbv2_describe_load_balancers.Rd | 4 man/elbv2_describe_rules.Rd | 4 man/elbv2_describe_ssl_policies.Rd | 4 man/elbv2_describe_tags.Rd | 4 man/elbv2_describe_target_group_attributes.Rd | 4 man/elbv2_describe_target_groups.Rd | 4 man/elbv2_describe_target_health.Rd | 6 man/elbv2_modify_listener.Rd | 6 man/elbv2_modify_load_balancer_attributes.Rd | 8 man/elbv2_modify_rule.Rd | 4 man/elbv2_modify_target_group.Rd | 4 man/elbv2_modify_target_group_attributes.Rd | 4 man/elbv2_register_targets.Rd | 6 man/elbv2_remove_tags.Rd | 4 man/elbv2_set_rule_priorities.Rd | 4 man/elbv2_set_security_groups.Rd | 4 man/elbv2_set_subnets.Rd | 4 man/globalaccelerator.Rd | 112 +++---- man/route53.Rd | 4 man/route53_associate_vpc_with_hosted_zone.Rd | 4 man/route53_change_resource_record_sets.Rd | 22 - man/route53_change_tags_for_resource.Rd | 4 man/route53_create_query_logging_config.Rd | 160 +++++----- man/route53_get_hosted_zone.Rd | 4 man/route53_list_resource_record_sets.Rd | 27 - man/route53domains.Rd | 4 man/route53resolver.Rd | 4 man/servicediscovery.Rd | 4 98 files changed, 712 insertions(+), 723 deletions(-)
More information about paws.networking at CRAN
Permanent link
Title: Amazon Web Services Database APIs
Description: Interface to Amazon Web Services database APIs, including
'Relational Database Service' ('RDS'), 'DynamoDB' 'NoSQL' database,
and more <https://aws.amazon.com/>.
Author: David Kretch [aut, cre],
Adam Banker [aut],
Amazon.com, Inc. [cph]
Maintainer: David Kretch <david.kretch@gmail.com>
Diff between paws.database versions 0.1.6 dated 2020-01-12 and 0.1.7 dated 2020-03-29
DESCRIPTION | 8 - MD5 | 118 +++++++++++++------------- R/dax_service.R | 7 - R/docdb_operations.R | 4 R/docdb_service.R | 7 - R/dynamodb_operations.R | 28 +++--- R/dynamodb_service.R | 7 - R/dynamodbstreams_operations.R | 8 - R/dynamodbstreams_service.R | 7 - R/elasticache_operations.R | 20 ++-- R/elasticache_service.R | 7 - R/neptune_operations.R | 6 - R/neptune_service.R | 7 - R/rds_custom.R | 6 - R/rds_operations.R | 24 ++--- R/rds_service.R | 7 - R/rdsdataservice_service.R | 9 - R/redshift_operations.R | 24 ++--- R/redshift_service.R | 7 - R/simpledb_service.R | 7 - man/dax.Rd | 4 man/docdb.Rd | 4 man/dynamodb.Rd | 4 man/dynamodb_batch_get_item.Rd | 4 man/dynamodb_batch_write_item.Rd | 4 man/dynamodb_create_table.Rd | 4 man/dynamodb_delete_item.Rd | 4 man/dynamodb_delete_table.Rd | 4 man/dynamodb_describe_limits.Rd | 4 man/dynamodb_describe_table.Rd | 4 man/dynamodb_get_item.Rd | 4 man/dynamodb_list_tables.Rd | 4 man/dynamodb_put_item.Rd | 4 man/dynamodb_query.Rd | 4 man/dynamodb_scan.Rd | 4 man/dynamodb_update_item.Rd | 4 man/dynamodb_update_table.Rd | 4 man/dynamodbstreams.Rd | 4 man/dynamodbstreams_describe_stream.Rd | 4 man/dynamodbstreams_get_records.Rd | 4 man/dynamodbstreams_get_shard_iterator.Rd | 4 man/dynamodbstreams_list_streams.Rd | 4 man/elasticache.Rd | 4 man/elasticache_copy_snapshot.Rd | 16 +-- man/elasticache_modify_cache_cluster.Rd | 2 man/elasticache_modify_replication_group.Rd | 2 man/neptune.Rd | 4 man/rds.Rd | 4 man/rds_build_auth_token.Rd | 6 - man/rds_modify_db_instance.Rd | 12 +- man/rdsdataservice.Rd | 4 man/redshift.Rd | 4 man/redshift_authorize_snapshot_access.Rd | 2 man/redshift_copy_cluster_snapshot.Rd | 2 man/redshift_create_snapshot_schedule.Rd | 2 man/redshift_delete_cluster_snapshot.Rd | 2 man/redshift_modify_snapshot_schedule.Rd | 2 man/redshift_restore_from_cluster_snapshot.Rd | 2 man/redshift_revoke_snapshot_access.Rd | 2 man/simpledb.Rd | 4 60 files changed, 236 insertions(+), 246 deletions(-)
Title: Highlight Lines and Points in 'ggplot2'
Description: Make it easier to explore data with highlights.
Author: Hiroaki Yutani [aut, cre] (<https://orcid.org/0000-0002-3385-7233>)
Maintainer: Hiroaki Yutani <yutani.ini@gmail.com>
Diff between gghighlight versions 0.2.0 dated 2020-01-25 and 0.3.0 dated 2020-03-29
gghighlight-0.2.0/gghighlight/tests/figs/visual-tests |only gghighlight-0.2.0/gghighlight/tests/testthat/test-gghighlight_old_point.R |only gghighlight-0.2.0/gghighlight/tests/testthat/test-gghighligt_old_line.R |only gghighlight-0.3.0/gghighlight/DESCRIPTION | 13 gghighlight-0.3.0/gghighlight/MD5 | 50 +- gghighlight-0.3.0/gghighlight/NAMESPACE | 1 gghighlight-0.3.0/gghighlight/NEWS.md | 6 gghighlight-0.3.0/gghighlight/R/gghighlight-old.R | 188 ---------- gghighlight-0.3.0/gghighlight/R/gghighlight.R | 13 gghighlight-0.3.0/gghighlight/README.md | 2 gghighlight-0.3.0/gghighlight/build/gghighlight.pdf |binary gghighlight-0.3.0/gghighlight/build/vignette.rds |binary gghighlight-0.3.0/gghighlight/inst/doc/gghighlight.R | 2 gghighlight-0.3.0/gghighlight/inst/doc/gghighlight.Rmd | 2 gghighlight-0.3.0/gghighlight/inst/doc/gghighlight.html | 24 + gghighlight-0.3.0/gghighlight/man/gghighlight-old.Rd | 51 -- gghighlight-0.3.0/gghighlight/tests/figs/vdiffr |only gghighlight-0.3.0/gghighlight/tests/testthat/helpers.R | 2 gghighlight-0.3.0/gghighlight/tests/testthat/test-bleach.R | 7 gghighlight-0.3.0/gghighlight/tests/testthat/test-calculate-group.R | 6 gghighlight-0.3.0/gghighlight/tests/testthat/test-gghighlight.R | 2 gghighlight-0.3.0/gghighlight/tests/testthat/test-label.R | 6 gghighlight-0.3.0/gghighlight/tests/testthat/test-sieve.R | 6 gghighlight-0.3.0/gghighlight/tests/testthat/test-vdiffr.R | 3 gghighlight-0.3.0/gghighlight/vignettes/gghighlight.Rmd | 2 25 files changed, 101 insertions(+), 285 deletions(-)
Title: Representation of DET Curve with Confidence Intervals
Description: Builds both ROC (Receiver Operating Characteristic) and DET (Detection Error Tradeoff) curves from a set of predictors, which are the
results of a binary classification system. The curves give a general vision of the performance of the classifier,
and are useful for comparing performance of different systems.
Author: García-Ródenas, Álvaro [aut, cre],
Franco, Manuel [aut],
Vivo, Juana-María [aut],
Fernández-Breis, Jesualdo T. [aut],
Font, Roberto [aut]
Maintainer: "García-Ródenas, Álvaro" <alvaro.garcia9@um.es>
Diff between DET versions 2.0.1 dated 2019-06-14 and 2.0.2 dated 2020-03-29
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- data/ovarianCancer.RData |binary data/ovarianCancer.rda |binary 4 files changed, 7 insertions(+), 7 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-20 0.1.1
2020-01-14 0.1.0
2019-11-15 0.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-12-19 0.1.1
2019-06-14 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-12-19 0.0.2
2019-06-18 0.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-07-18 2019.7.3
Title: Early Testing for a Treatment Effect using Surrogate Marker
Information
Description: Provides functions to test for a treatment effect in terms of the difference in survival between a treatment group and a control group using surrogate marker information obtained at some early time point in a time-to-event outcome setting. Nonparametric kernel estimation is used to estimate the test statistic and perturbation resampling is used for variance estimation. More details will be available in the future in: Parast L, Cai T, Tian L (2019). Using a Surrogate Marker for Early Testing of a Treatment Effect. Biometrics, In press.
Author: Layla Parast
Maintainer: Layla Parast <parast@rand.org>
Diff between SurrogateTest versions 1.1 dated 2019-03-28 and 1.2 dated 2020-03-29
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- man/recover.B.Rd | 4 ++-- 3 files changed, 8 insertions(+), 8 deletions(-)
Title: Simulation of Diffusion Processes
Description: It provides users with a wide range of tools to simulate, estimate, analyze, and visualize the dynamics of stochastic differential systems in both forms Ito and Stratonovich. Statistical analysis with parallel Monte Carlo and moment equations methods of SDE's. Enabled many searchers in different domains to use these equations to modeling practical problems in financial and actuarial modeling and other areas of application, e.g., modeling and simulate of first passage time problem in shallow water using the attractive center (Boukhetala K, 1996) ISBN:1-56252-342-2.
Author: Arsalane Chouaib Guidoum [cre, aut],
Kamal Boukhetala [aut]
Maintainer: Arsalane Chouaib Guidoum <acguidoum@usthb.dz>
Diff between Sim.DiffProc versions 4.4 dated 2019-05-27 and 4.5 dated 2020-03-29
DESCRIPTION | 8 MD5 | 71 +++-- R/zzz.r | 2 README.md | 18 - build/vignette.rds |binary demo/Sim.DiffProc.R | 23 + inst/CITATION | 2 inst/NEWS.Rd | 7 inst/doc/bridgesde.Rmd | 4 inst/doc/bridgesde.html | 527 ++++++++++++++++++++++---------------------- inst/doc/fitsde.Rmd | 4 inst/doc/fitsde.html | 93 ++++--- inst/doc/fptsde.Rmd | 4 inst/doc/fptsde.html | 363 +++++++++++++++--------------- inst/doc/mcmsde.R | 14 - inst/doc/mcmsde.Rmd | 6 inst/doc/mcmsde.html | 59 ++-- inst/doc/sdetotex.Rmd | 6 inst/doc/sdetotex.html | 99 ++++---- inst/doc/snssde.Rmd | 6 inst/doc/snssde.html | 511 ++++++++++++++++++++++-------------------- man/ABM.Rd | 2 man/Irates.Rd | 2 man/Sim.DiffProc-package.Rd | 4 man/fitsde.Rd | 119 --------- man/rsde1d.Rd | 6 man/rsde3d.Rd | 2 tests/TEX.r |only tests/bridgesde.R | 1 tests/fptsde.R | 2 tests/snssde.R | 1 vignettes/bridgesde.Rmd | 4 vignettes/fitsde.Rmd | 4 vignettes/fptsde.Rmd | 4 vignettes/mcmsde.Rmd | 6 vignettes/sdetotex.Rmd | 6 vignettes/snssde.Rmd | 6 37 files changed, 982 insertions(+), 1014 deletions(-)
Title: Time Series Plot
Description: A fast and elegant time series visualization package. In addition to the
standard R plot types, this package supports candle sticks, open-high-low-close, and
volume plots. Useful for visualizing any time series data, e.g., stock prices and
technical indicators.
Author: RTSVizTeam [aut, cph],
Irina Kapler [cre]
Maintainer: Irina Kapler <irkapler@gmail.com>
Diff between rtsplot versions 0.1.2 dated 2020-01-25 and 0.1.3 dated 2020-03-29
DESCRIPTION | 9 ++++---- MD5 | 42 ++++++++++++++++++++--------------------- NEWS.md | 4 +++ R/rtsplot.r | 26 ++++++++++++------------- README.md | 2 - man/Themes.Rd | 2 - man/rtsplot.Rd | 4 +-- man/rtsplot.candle.Rd | 4 +-- man/rtsplot.corner.label.Rd | 2 - man/rtsplot.fake.stock.data.Rd | 2 - man/rtsplot.format.Rd | 2 - man/rtsplot.grid.Rd | 2 - man/rtsplot.hl.Rd | 4 +-- man/rtsplot.legend.Rd | 2 - man/rtsplot.lines.Rd | 2 - man/rtsplot.matplot.Rd | 2 - man/rtsplot.ohlc.Rd | 4 +-- man/rtsplot.stacked.Rd | 2 - man/rtsplot.text.Rd | 2 - man/rtsplot.x.highlight.Rd | 2 - man/rtsplot.y.highlight.Rd | 18 ++++++++--------- man/rtsplot2Y.Rd | 2 - 22 files changed, 73 insertions(+), 68 deletions(-)
Title: Projection Based Clustering
Description: A clustering approach applicable to every projection method is proposed here. The two-dimensional scatter plot of any projection method can construct a topographic map which displays unapparent data structures by using distance and density information of the data. The generalized U*-matrix renders this visualization in the form of a topographic map, which can be used to automatically define the clusters of high-dimensional data. The whole system is the generalization of on an idea from the book "Projection-Based Clustering through Self-Organization and Swarm Intelligence" <DOI:10.1007/978-3-658-20540-9>. Selecting the correct projection method will result in a visualization in which mountains surround each cluster. The number of clusters can be determined by counting valleys on the topographic map. Most projection methods are wrappers for already available methods in R. By contrast, the neighbor retrieval visualizer (NeRV) is based on C++ source code of the 'dredviz' software package, and the Curvilinear Component Analysis (CCA) is translated from 'MATLAB' ('SOM Toolbox' 2.0) to R.
Author: Michael Thrun [aut, cre, cph],
Florian Lerch [aut],
Felix Pape [aut],
Tim Schreier [aut],
Luis Winckelmann [aut],
Kristian Nybo [cph],
Jarkko Venna [cph]
Maintainer: Michael Thrun <m.thrun@gmx.net>
Diff between ProjectionBasedClustering versions 1.1.0 dated 2020-02-03 and 1.1.1 dated 2020-03-29
DESCRIPTION | 17 MD5 | 32 NAMESPACE | 4 R/CCA.R | 2 R/Delaunay4Points.R | 2 R/MDS.R | 2 R/PCA.R | 2 R/ProjectionBasedClustering.R | 2 R/ShortestGraphPathsC.R | 4 R/interactiveProjectionBasedClustering.R | 1514 ++++++++++++++-------------- R/tSNE.R | 2 man/PlotProjectedPoints.Rd | 2 man/ProjectionBasedClustering-package.Rd | 170 +-- man/ProjectionBasedClustering.Rd | 153 +- man/interactiveClustering.Rd | 9 man/interactiveGeneralizedUmatrixIsland.Rd | 5 man/interactiveProjectionBasedClustering.Rd | 92 - 17 files changed, 1037 insertions(+), 977 deletions(-)
More information about ProjectionBasedClustering at CRAN
Permanent link
Title: Fast Fixed-Effects Estimations
Description: Fast and user-friendly estimation of econometric models with multiple fixed-effects. Includes ordinary least squares (OLS), generalized linear models (GLM) and the negative binomial.
The core of the package is based on optimized parallel C++ code, scaling especially well for large data sets. The method to obtain the fixed-effects coefficients is based on Berge (2018) <https://wwwen.uni.lu/content/download/110162/1299525/file/2018_13>.
Further provides tools to export and view the results of several estimations with intuitive design to cluster the standard-errors.
Author: Laurent Berge [aut, cre]
Maintainer: Laurent Berge <laurent.berge@uni.lu>
Diff between fixest versions 0.3.1 dated 2020-02-09 and 0.4.0 dated 2020-03-29
DESCRIPTION | 9 MD5 | 53 - NAMESPACE | 6 R/Lagging.R | 62 - R/MiscFuns.R | 1385 +++++++++++---------------------------- R/coefplot.R |only R/fixest_env.R | 2 R/onLoad.R | 2 R/xaxis.R |only inst/NEWS.Rd | 45 + inst/doc/fixest_walkthrough.html | 161 ++-- man/coefplot.Rd | 108 ++- man/collinearity.Rd | 3 man/etable.Rd | 62 + man/fitted.fixest.Rd | 2 man/l.Rd | 13 man/lag.formula.Rd | 17 man/panel.Rd | 13 man/print.fixest.Rd | 3 man/setFixest_coefplot.Rd | 82 +- man/setFixest_dict.Rd | 9 man/setFixest_na_inf.rm.Rd | 9 man/setFixest_notes.Rd | 7 man/setFixest_nthreads.Rd | 4 man/setFixest_print.type.Rd | 7 man/sub-.fixest_panel.Rd | 19 man/summary.fixest.Rd | 3 man/terms.fixest.Rd |only src/misc_funs.cpp | 4 29 files changed, 851 insertions(+), 1239 deletions(-)
Title: Functions for Common Chart Types
Description: Wrapper for the 'ggplot2' package that creates a variety of common
charts (e.g. bar, line, area, ROC, waterfall, pie) while aiming to reduce
typing.
Author: Wojtek Kostelecki
Maintainer: Wojtek Kostelecki <wojtek.kostelecki@gmail.com>
Diff between ezplot versions 0.3.1 dated 2019-07-20 and 0.4.0 dated 2020-03-29
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Title: Organising and Analysing Eye-Tracking Data
Description: A set of functions for organising and analysing datasets from
experiments run using 'Eyelink' eye-trackers. Organising functions help
to clean and prepare eye-tracking datasets for analysis, and mark up
key events such as display changes and responses made by participants.
Analysing functions help to create means for a wide range of standard
measures (such as 'mean fixation durations'), which can then be fed into
the appropriate statistical analyses and graphing packages as necessary.
Author: Hayward Godwin [aut, cre],
Alexander Muhl-Richardson [ctb]
Maintainer: Hayward Godwin <hg102@soton.ac.uk>
Diff between eyeTrackR versions 1.0.0 dated 2019-10-28 and 1.0.1 dated 2020-03-29
DESCRIPTION | 10 +++++----- MD5 | 26 +++++++++++++------------- R/messagereport.R | 2 +- man/analyse.calculate.means.Rd | 13 ++++++++++--- man/analyse.fix.count.Rd | 8 ++++++-- man/analyse.fix.duration.Rd | 8 ++++++-- man/analyse.fix.first_duration.Rd | 8 ++++++-- man/analyse.fix.totaltime.Rd | 8 ++++++-- man/analyse.sac.amplitude.Rd | 8 ++++++-- man/analyse.visit.count.Rd | 8 ++++++-- man/messagereport.Rd | 1 - man/organise.behavioural.base.Rd | 7 +++++-- man/organise.message.markup.Rd | 8 ++++++-- man/organise.message.return_specific.Rd | 8 ++++++-- 14 files changed, 82 insertions(+), 41 deletions(-)
Title: Evolutionary Trait Divergence Between Sister Species and Other
Paired Lineages
Description: Compares alternative models of continuous trait differentiation in sister species and other paired lineages. Alternative models include approximations of divergent selection, drift, and stabilizing selection, plus a variety of extensions to facilitate the testing of process-to-pattern hypotheses. Alternative processes are expected to leave unique signatures in the distribution of trait differentiation in datasets comprised of many species pairs. Users supply species pair trait data and divergence times. The fit of alternative models is compared in a likelihood framework.
Author: Sean A. S. Anderson and Jason T. Weir
Maintainer: Sean A. S. Anderson <seanas.anderson@mail.utoronto.ca>
Diff between diverge versions 1.0.2 dated 2020-03-03 and 1.0.3 dated 2020-03-29
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- man/extract_sisters.Rd | 4 ++-- 3 files changed, 8 insertions(+), 8 deletions(-)
Title: Composite-Based Structural Equation Modeling
Description: Estimate, assess, test, and study linear, nonlinear, hierarchical
and multigroup structural equation models using composite-based approaches
and procedures, including estimation techniques such as partial least squares
path modeling (PLS-PM) and its derivatives (PLSc, ordPLSc, robustPLSc),
generalized structured component analysis (GSCA), generalized structured
component analysis with uniqueness terms (GSCAm), generalized canonical
correlation analysis (GCCA), principal component analysis (PCA),
factor score regression (FSR) using sum score, regression or
bartlett scores (including bias correction using Croon’s approach),
as well as several tests and typical postestimation procedures
(e.g., verify admissibility of the estimates, assess the model fit,
test the model fit etc.).
Author: Manuel E. Rademaker [aut, cre]
(<https://orcid.org/0000-0002-8902-3561>),
Florian Schuberth [aut] (<https://orcid.org/0000-0002-2110-9086>),
Tamara Schamberger [ctb] (<https://orcid.org/0000-0002-7845-784X>),
Michael Klesel [ctb],
Theo K. Dijkstra [ctb],
Jörg Henseler [ctb] (<https://orcid.org/0000-0002-9736-3048>)
Maintainer: Manuel E. Rademaker <manuel.rademaker@uni-wuerzburg.de>
Diff between cSEM versions 0.1.0 dated 2020-01-13 and 0.2.0 dated 2020-03-29
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Title: Extract Coordinate System Metadata
Description: Obtain coordinate system metadata from various data formats. There
are functions to extract a 'CRS' (coordinate reference system,
<https://en.wikipedia.org/wiki/Spatial_reference_system>) in 'EPSG' (European
Petroleum Survey Group, <http://www.epsg.org/>), 'PROJ4' <https://proj.org/>,
or 'WKT2' (Well-Known Text 2,
<http://docs.opengeospatial.org/is/12-063r5/12-063r5.html>) forms. This is
purely for getting simple metadata from in-memory formats, please use other
tools for out of memory data sources.
Author: Michael Sumner [aut, cre] (<https://orcid.org/0000-0002-2471-7511>)
Maintainer: Michael Sumner <mdsumner@gmail.com>
Diff between crsmeta versions 0.2.0 dated 2020-03-20 and 0.3.0 dated 2020-03-29
DESCRIPTION | 8 +++---- MD5 | 27 +++++++++++++----------- NAMESPACE | 1 NEWS.md |only R/crsmeta-package.R | 19 ++++++++++++++--- R/get_crs.R | 51 +++++++++++++++++++++++++++++++++++++++++----- README.md | 36 +++++++++++++++++++++----------- data/sfx.rda |binary data/sfx_new.rda |only man/crs_epsg.Rd | 4 ++- man/crs_input.Rd |only man/crs_proj.Rd | 4 ++- man/crs_wkt2.Rd | 8 ++++--- man/crsmeta-package.Rd | 3 ++ man/sfx.Rd | 15 ++++++++++++- tests/testthat/test-crs.R | 26 ++++++++++++++++++++++- 16 files changed, 159 insertions(+), 43 deletions(-)
Title: Composite Grid Gaussian Processes
Description: Run computer experiments using the adaptive composite grid
algorithm with a Gaussian process model.
The algorithm works best when running an experiment that can evaluate thousands
of points from a deterministic computer simulation.
This package is an implementation of a forthcoming paper by Plumlee,
Erickson, Ankenman, et al. For a preprint of the paper,
contact the maintainer of this package.
Author: Collin Erickson [aut, cre],
Matthew Plumlee [aut]
Maintainer: Collin Erickson <collinberickson@gmail.com>
Diff between CGGP versions 1.0.1 dated 2019-06-14 and 1.0.2 dated 2020-03-29
DESCRIPTION | 8 MD5 | 163 +-- NAMESPACE | 119 +- NEWS.md | 25 R/CGGP.R | 18 R/CGGP_S3_methods.R | 140 +- R/CGGP_append_fs.R | 1096 +++++++++++----------- R/CGGP_calc_lS_cholS_valo_etc.R | 486 ++++----- R/CGGP_calc_supp_pw_sigma2_Sti.R | 256 ++--- R/CGGP_corr_fs.R | 926 +++++++++++-------- R/CGGP_create_fs.R | 580 +++++------ R/CGGP_fastcalcassist_fs.R | 632 ++++++------ R/CGGP_fit_fs.R | 1306 +++++++++++++------------- R/CGGP_fitwithonlysupp.R | 454 ++++----- R/CGGP_gneglogpost.R | 842 ++++++++--------- R/CGGP_impute_fs.R | 724 +++++++------- R/CGGP_neglogpost.R | 444 ++++----- R/CGGP_plot.R | 1657 +++++++++++++++++----------------- R/CGGP_postvarcalc.R | 166 +-- R/CGGP_pred_fs.R | 688 +++++++------- R/CGGP_predwithonlysupp.R | 296 +++--- R/CGGP_sharedfunctions.R | 303 +++--- R/RcppExports.R | 116 +- README.md | 524 +++++----- build/vignette.rds |binary inst/doc/CGGP.R | 108 +- inst/doc/CGGP.Rmd | 434 ++++---- inst/doc/CGGP.html | 884 +++++++++--------- man/CGGP.Rd | 29 man/CGGP_internal_CorrMatCauchy.Rd | 102 +- man/CGGP_internal_CorrMatCauchySQ.Rd | 102 +- man/CGGP_internal_CorrMatCauchySQT.Rd | 102 +- man/CGGP_internal_CorrMatGaussian.Rd | 110 +- man/CGGP_internal_CorrMatMatern32.Rd | 102 +- man/CGGP_internal_CorrMatMatern52.Rd | 102 +- man/CGGP_internal_CorrMatPowerExp.Rd | 102 +- man/CGGP_internal_CorrMatWendland0.Rd |only man/CGGP_internal_CorrMatWendland1.Rd |only man/CGGP_internal_CorrMatWendland2.Rd |only man/CGGP_internal_MSEpredcalc.Rd | 54 - man/CGGP_internal_calcMSE.Rd | 52 - man/CGGP_internal_calcMSEde.Rd | 62 - man/CGGP_internal_calcpw.Rd | 60 - man/CGGP_internal_calcpwanddpw.Rd | 56 - man/CGGP_internal_gneglogpost.Rd | 90 + man/CGGP_internal_neglogpost.Rd | 89 - man/CGGP_internal_set_corr.Rd | 46 man/CGGPappend.Rd | 90 - man/CGGPcreate.Rd | 101 +- man/CGGPfit.Rd | 117 +- man/CGGPplotblocks.Rd | 85 - man/CGGPplotblockselection.Rd | 63 - man/CGGPplotcorr.Rd | 110 +- man/CGGPplotheat.Rd | 105 +- man/CGGPplothist.Rd | 91 - man/CGGPplotsamplesneglogpost.Rd | 69 - man/CGGPplotslice.Rd | 121 +- man/CGGPplottheta.Rd | 70 - man/CGGPplotvariogram.Rd | 81 - man/CGGPpred.Rd | 98 +- man/CGGPvalplot.Rd | 87 - man/CGGPvalstats.Rd | 100 +- man/plot.CGGP.Rd | 58 - man/print.CGGP.Rd | 54 - man/rcpp_fastmatclcr.Rd | 50 - man/rcpp_fastmatclcranddclcr.Rd | 62 - man/rcpp_gkronDBS.Rd | 52 - man/rcpp_kronDBS.Rd | 42 man/valplot.Rd | 74 - man/valstats.Rd | 144 +- src/specialkronfunctions.cpp | 18 tests/testthat.R | 8 tests/testthat/testS3.R | 46 tests/testthat/testappend.R | 136 +- tests/testthat/testcorr.R | 928 ++++++++++--------- tests/testthat/testcreate.R | 40 tests/testthat/testfastcalcassist.R | 170 +-- tests/testthat/testfit.R | 376 +++---- tests/testthat/testimputation.R | 108 +- tests/testthat/testoutputparamdim.R | 256 ++--- tests/testthat/testplot.R | 368 +++---- tests/testthat/testpred.R | 588 ++++++------ tests/testthat/testsupponly.R | 690 +++++++------- vignettes/CGGP.Rmd | 434 ++++---- 84 files changed, 10619 insertions(+), 10126 deletions(-)
Title: R Client for 'kintone' API
Description: Retrieve data from 'kintone' (<https://www.kintone.com/>) via its API.
'kintone' is an enterprise application platform.
Author: Hiroaki Yutani [aut, cre] (<https://orcid.org/0000-0002-3385-7233>)
Maintainer: Hiroaki Yutani <yutani.ini@gmail.com>
Diff between kntnr versions 0.4.2 dated 2019-08-25 and 0.4.3 dated 2020-03-29
DESCRIPTION | 18 +-- MD5 | 20 +-- NAMESPACE | 24 ++-- NEWS.md | 4 man/kntn_auth.Rd | 110 +++++++++---------- man/kntn_file.Rd | 77 ++++++------- man/kntn_parse.Rd | 78 ++++++------- man/kntn_record.Rd | 220 +++++++++++++++++++------------------- man/kntn_unnest.Rd | 32 ++--- man/kntnr.Rd | 19 +-- tests/testthat/test-parse-field.R | 17 ++ 11 files changed, 319 insertions(+), 300 deletions(-)
Title: Toolbox for Model Building and Forecasting
Description: Implements functions and instruments for regression model building and its
application to forecasting. The main scope of the package is in variables selection
and models specification for cases of time series data. This includes promotional
modelling, selection between different dynamic regressions with non-standard
distributions of errors, selection based on cross validation, solutions to the fat
regression model problem and more. Models developed in the package are tailored
specifically for forecasting purposes. So as a results there are several methods
that allow producing forecasts from these models and visualising them.
Author: Ivan Svetunkov [aut, cre] (Lecturer at Centre for Marketing Analytics
and Forecasting, Lancaster University, UK),
Yves R. Sagaert [ctb] (Visiting Research at Centre for Marketing
Analytics and Forecasting, Lancaster University, UK)
Maintainer: Ivan Svetunkov <ivan@svetunkov.ru>
Diff between greybox versions 0.5.8 dated 2020-02-08 and 0.5.9 dated 2020-03-29
greybox-0.5.8/greybox/R/rmc.R |only greybox-0.5.8/greybox/man/rmc.Rd |only greybox-0.5.9/greybox/DESCRIPTION | 10 greybox-0.5.9/greybox/MD5 | 76 ++-- greybox-0.5.9/greybox/NAMESPACE | 15 greybox-0.5.9/greybox/NEWS | 24 + greybox-0.5.9/greybox/R/alm.R | 194 ++++------ greybox-0.5.9/greybox/R/determination.R | 39 +- greybox-0.5.9/greybox/R/error-measures.R | 56 ++- greybox-0.5.9/greybox/R/graphmaker.R | 62 --- greybox-0.5.9/greybox/R/greybox-package.R | 10 greybox-0.5.9/greybox/R/isFunctions.R | 7 greybox-0.5.9/greybox/R/lmCombine.R | 7 greybox-0.5.9/greybox/R/lmDynamic.R | 9 greybox-0.5.9/greybox/R/methods.R | 123 ++++-- greybox-0.5.9/greybox/R/rmcb.R |only greybox-0.5.9/greybox/R/ro.R | 2 greybox-0.5.9/greybox/R/spread.R | 18 greybox-0.5.9/greybox/R/stepwise.R | 28 - greybox-0.5.9/greybox/README.md | 4 greybox-0.5.9/greybox/build/partial.rdb |binary greybox-0.5.9/greybox/inst/doc/alm.R | 5 greybox-0.5.9/greybox/inst/doc/alm.Rmd | 105 +++-- greybox-0.5.9/greybox/inst/doc/alm.html | 389 ++++++++++----------- greybox-0.5.9/greybox/inst/doc/greybox.Rmd | 6 greybox-0.5.9/greybox/inst/doc/greybox.html | 8 greybox-0.5.9/greybox/inst/doc/maUsingGreybox.html | 4 greybox-0.5.9/greybox/inst/doc/ro.html | 28 - greybox-0.5.9/greybox/man/alm.Rd | 7 greybox-0.5.9/greybox/man/determination.Rd | 22 - greybox-0.5.9/greybox/man/error-measures.Rd | 14 greybox-0.5.9/greybox/man/greybox.Rd | 10 greybox-0.5.9/greybox/man/isFunctions.Rd | 4 greybox-0.5.9/greybox/man/lmCombine.Rd | 8 greybox-0.5.9/greybox/man/lmDynamic.Rd | 8 greybox-0.5.9/greybox/man/measures.Rd | 2 greybox-0.5.9/greybox/man/rmcb.Rd |only greybox-0.5.9/greybox/man/spread.Rd | 5 greybox-0.5.9/greybox/man/stepwise.Rd | 8 greybox-0.5.9/greybox/vignettes/alm.Rmd | 105 +++-- greybox-0.5.9/greybox/vignettes/greybox.Rmd | 6 41 files changed, 830 insertions(+), 598 deletions(-)
Title: Non-Interactive Spatial Tools for Raster Processing and
Visualization
Description: S3 classes and methods for manipulation with georeferenced raster data: reading/writing, processing, multi-panel visualization.
Author: Nikita Platonov [aut, cre] (<https://orcid.org/0000-0001-7196-7882>)
Maintainer: Nikita Platonov <platonov@sevin.ru>
Diff between ursa versions 3.8.18 dated 2020-03-26 and 3.8.19 dated 2020-03-29
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- NEWS.md | 6 +++++- man/glance.Rd | 2 +- man/package_raster.Rd | 10 +++++----- man/panel_raster.Rd | 2 +- 6 files changed, 20 insertions(+), 16 deletions(-)
Title: Seeded Canonical Correlation Analysis
Description: Functions for dimension reduction through the seeded canonical correlation analysis are provided. A classical canonical correlation analysis (CCA) is one of useful statistical methods in multivariate data analysis, but it is limited in use due to the matrix inversion for large p small n data. To overcome this, a seeded CCA has been proposed in Im, Gang and Yoo (2015) <DOI:10.1002/cem.2691>. The seeded CCA is a two-step procedure. The sets of variables are initially reduced by successively projecting cov(X,Y) or cov(Y,X) onto cov(X) and cov(Y), respectively, without loss of information on canonical correlation analysis, following Cook, Li and Chiaromonte (2007) <DOI:10.1093/biomet/asm038> and Lee and Yoo (2014) <DOI:10.1111/anzs.12057>. Then, the canonical correlation is finalized with the initially-reduced two sets of variables.
Author: Jae Keun Yoo, Bo-Young Kim
Maintainer: Jae Keun Yoo <peter.yoo@ewha.ac.kr>
Diff between seedCCA versions 1.0 dated 2017-08-30 and 3.0 dated 2020-03-29
seedCCA-1.0/seedCCA/R/Pm.R |only seedCCA-1.0/seedCCA/R/covplot.R |only seedCCA-1.0/seedCCA/R/finalCCA.R |only seedCCA-1.0/seedCCA/R/iniCCA.R |only seedCCA-1.0/seedCCA/R/seeding.R |only seedCCA-1.0/seedCCA/R/selectu.R |only seedCCA-3.0/seedCCA/DESCRIPTION | 8 seedCCA-3.0/seedCCA/MD5 | 33 - seedCCA-3.0/seedCCA/NAMESPACE | 5 seedCCA-3.0/seedCCA/R/seedCCA.R | 578 +++++++++++++++++++++++++-- seedCCA-3.0/seedCCA/man/Pm.Rd | 5 seedCCA-3.0/seedCCA/man/coef.seedCCA.Rd |only seedCCA-3.0/seedCCA/man/covplot.Rd | 8 seedCCA-3.0/seedCCA/man/finalCCA.Rd | 12 seedCCA-3.0/seedCCA/man/fitted.seedCCA.Rd |only seedCCA-3.0/seedCCA/man/iniCCA.Rd | 13 seedCCA-3.0/seedCCA/man/plot.seedCCA.Rd |only seedCCA-3.0/seedCCA/man/print.seedCCA.Rd |only seedCCA-3.0/seedCCA/man/seedCCA.Rd | 161 ++++++- seedCCA-3.0/seedCCA/man/seeding.Rd | 19 seedCCA-3.0/seedCCA/man/seeding.auto.stop.Rd |only seedCCA-3.0/seedCCA/man/seedols.Rd |only seedCCA-3.0/seedCCA/man/seedpls.Rd |only seedCCA-3.0/seedCCA/man/selectu.Rd | 58 +- 24 files changed, 771 insertions(+), 129 deletions(-)
Title: Amazon Web Services Management & Governance APIs
Description: Interface to Amazon Web Services management and governance
APIs, including 'CloudWatch' application and infrastructure
monitoring, 'Auto Scaling' for automatically scaling resources, and
more <https://aws.amazon.com/>.
Author: David Kretch [aut, cre],
Adam Banker [aut],
Amazon.com, Inc. [cph]
Maintainer: David Kretch <david.kretch@gmail.com>
Diff between paws.management versions 0.1.6 dated 2020-01-12 and 0.1.7 dated 2020-03-29
DESCRIPTION | 8 MD5 | 328 ++++++------ R/applicationautoscaling_operations.R | 26 R/applicationautoscaling_service.R | 7 R/applicationinsights_service.R | 7 R/autoscaling_operations.R | 120 ++-- R/autoscaling_service.R | 7 R/autoscalingplans_service.R | 7 R/cloudformation_service.R | 7 R/cloudtrail_service.R | 7 R/cloudwatch_service.R | 7 R/cloudwatchevents_operations.R | 8 R/cloudwatchevents_service.R | 7 R/cloudwatchlogs_operations.R | 14 R/cloudwatchlogs_service.R | 7 R/configservice_operations.R | 2 R/configservice_service.R | 7 R/health_service.R | 7 R/licensemanager_service.R | 7 R/opsworks_service.R | 7 R/opsworkscm_operations.R | 4 R/opsworkscm_service.R | 7 R/organizations_operations.R | 94 +-- R/organizations_service.R | 7 R/pi_service.R | 7 R/resourcegroups_service.R | 7 R/resourcegroupstaggingapi_service.R | 7 R/servicecatalog_operations.R | 134 ++-- R/servicecatalog_service.R | 7 R/servicequotas_service.R | 7 R/ssm_operations.R | 56 +- R/ssm_service.R | 7 R/support_service.R | 7 man/applicationautoscaling.Rd | 4 man/applicationautoscaling_delete_scaling_policy.Rd | 4 man/applicationautoscaling_deregister_scalable_target.Rd | 4 man/applicationautoscaling_describe_scalable_targets.Rd | 4 man/applicationautoscaling_describe_scaling_activities.Rd | 4 man/applicationautoscaling_describe_scaling_policies.Rd | 4 man/applicationautoscaling_put_scaling_policy.Rd | 14 man/applicationautoscaling_register_scalable_target.Rd | 6 man/applicationinsights.Rd | 4 man/autoscaling.Rd | 4 man/autoscaling_attach_instances.Rd | 4 man/autoscaling_attach_load_balancer_target_groups.Rd | 4 man/autoscaling_attach_load_balancers.Rd | 4 man/autoscaling_complete_lifecycle_action.Rd | 4 man/autoscaling_create_auto_scaling_group.Rd | 8 man/autoscaling_create_launch_configuration.Rd | 4 man/autoscaling_create_or_update_tags.Rd | 4 man/autoscaling_delete_auto_scaling_group.Rd | 6 man/autoscaling_delete_launch_configuration.Rd | 4 man/autoscaling_delete_lifecycle_hook.Rd | 4 man/autoscaling_delete_notification_configuration.Rd | 4 man/autoscaling_delete_policy.Rd | 4 man/autoscaling_delete_scheduled_action.Rd | 4 man/autoscaling_delete_tags.Rd | 4 man/autoscaling_describe_account_limits.Rd | 4 man/autoscaling_describe_adjustment_types.Rd | 4 man/autoscaling_describe_auto_scaling_groups.Rd | 4 man/autoscaling_describe_auto_scaling_instances.Rd | 4 man/autoscaling_describe_auto_scaling_notification_types.Rd | 4 man/autoscaling_describe_launch_configurations.Rd | 4 man/autoscaling_describe_lifecycle_hook_types.Rd | 4 man/autoscaling_describe_lifecycle_hooks.Rd | 4 man/autoscaling_describe_load_balancer_target_groups.Rd | 4 man/autoscaling_describe_load_balancers.Rd | 4 man/autoscaling_describe_metric_collection_types.Rd | 4 man/autoscaling_describe_notification_configurations.Rd | 4 man/autoscaling_describe_policies.Rd | 4 man/autoscaling_describe_scaling_activities.Rd | 4 man/autoscaling_describe_scaling_process_types.Rd | 4 man/autoscaling_describe_scheduled_actions.Rd | 4 man/autoscaling_describe_tags.Rd | 4 man/autoscaling_describe_termination_policy_types.Rd | 4 man/autoscaling_detach_instances.Rd | 4 man/autoscaling_detach_load_balancer_target_groups.Rd | 4 man/autoscaling_detach_load_balancers.Rd | 4 man/autoscaling_disable_metrics_collection.Rd | 4 man/autoscaling_enable_metrics_collection.Rd | 4 man/autoscaling_enter_standby.Rd | 4 man/autoscaling_execute_policy.Rd | 4 man/autoscaling_exit_standby.Rd | 4 man/autoscaling_put_lifecycle_hook.Rd | 4 man/autoscaling_put_notification_configuration.Rd | 4 man/autoscaling_put_scaling_policy.Rd | 4 man/autoscaling_put_scheduled_update_group_action.Rd | 4 man/autoscaling_record_lifecycle_action_heartbeat.Rd | 4 man/autoscaling_resume_processes.Rd | 4 man/autoscaling_set_desired_capacity.Rd | 4 man/autoscaling_set_instance_health.Rd | 4 man/autoscaling_set_instance_protection.Rd | 6 man/autoscaling_suspend_processes.Rd | 4 man/autoscaling_terminate_instance_in_auto_scaling_group.Rd | 4 man/autoscaling_update_auto_scaling_group.Rd | 12 man/autoscalingplans.Rd | 4 man/cloudformation.Rd | 4 man/cloudtrail.Rd | 4 man/cloudwatch.Rd | 4 man/cloudwatchevents.Rd | 4 man/cloudwatchevents_put_permission.Rd | 8 man/cloudwatchlogs.Rd | 4 man/cloudwatchlogs_create_log_stream.Rd | 2 man/configservice.Rd | 4 man/configservice_put_organization_conformance_pack.Rd | 2 man/health.Rd | 4 man/licensemanager.Rd | 4 man/opsworks.Rd | 4 man/opsworkscm.Rd | 4 man/opsworkscm_create_server.Rd | 2 man/organizations.Rd | 4 man/organizations_accept_handshake.Rd | 4 man/organizations_attach_policy.Rd | 6 man/organizations_cancel_handshake.Rd | 4 man/organizations_create_account.Rd | 4 man/organizations_create_organization.Rd | 6 man/organizations_create_organizational_unit.Rd | 4 man/organizations_create_policy.Rd | 6 man/organizations_decline_handshake.Rd | 4 man/organizations_delete_organizational_unit.Rd | 4 man/organizations_delete_policy.Rd | 4 man/organizations_describe_account.Rd | 4 man/organizations_describe_create_account_status.Rd | 4 man/organizations_describe_handshake.Rd | 4 man/organizations_describe_organization.Rd | 4 man/organizations_describe_organizational_unit.Rd | 4 man/organizations_describe_policy.Rd | 4 man/organizations_detach_policy.Rd | 4 man/organizations_disable_policy_type.Rd | 4 man/organizations_enable_all_features.Rd | 4 man/organizations_enable_policy_type.Rd | 4 man/organizations_invite_account_to_organization.Rd | 4 man/organizations_leave_organization.Rd | 4 man/organizations_list_accounts.Rd | 4 man/organizations_list_accounts_for_parent.Rd | 4 man/organizations_list_children.Rd | 4 man/organizations_list_create_account_status.Rd | 6 man/organizations_list_handshakes_for_account.Rd | 4 man/organizations_list_handshakes_for_organization.Rd | 4 man/organizations_list_organizational_units_for_parent.Rd | 4 man/organizations_list_parents.Rd | 4 man/organizations_list_policies.Rd | 4 man/organizations_list_policies_for_target.Rd | 4 man/organizations_list_roots.Rd | 4 man/organizations_list_targets_for_policy.Rd | 4 man/organizations_move_account.Rd | 4 man/organizations_remove_account_from_organization.Rd | 4 man/organizations_update_organizational_unit.Rd | 4 man/organizations_update_policy.Rd | 8 man/pi.Rd | 4 man/resourcegroups.Rd | 4 man/resourcegroupstaggingapi.Rd | 4 man/servicecatalog.Rd | 4 man/servicecatalog_create_constraint.Rd | 50 + man/servicecatalog_create_service_action.Rd | 29 - man/servicecatalog_update_constraint.Rd | 50 + man/servicequotas.Rd | 4 man/ssm.Rd | 4 man/ssm_create_association.Rd | 6 man/ssm_describe_ops_items.Rd | 4 man/ssm_describe_patch_properties.Rd | 38 - man/ssm_send_command.Rd | 4 man/ssm_start_automation_execution.Rd | 6 man/ssm_update_association.Rd | 6 man/support.Rd | 4 165 files changed, 838 insertions(+), 833 deletions(-)
More information about paws.management at CRAN
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Title: Amazon Web Services Compute APIs
Description: Interface to Amazon Web Services compute APIs, including
'Elastic Compute Cloud' ('EC2'), 'Lambda' functions-as-a-service,
containers, batch processing, and more <https://aws.amazon.com/>.
Author: David Kretch [aut, cre],
Adam Banker [aut],
Amazon.com, Inc. [cph]
Maintainer: David Kretch <david.kretch@gmail.com>
Diff between paws.compute versions 0.1.6 dated 2020-01-12 and 0.1.7 dated 2020-03-29
DESCRIPTION | 8 MD5 | 670 +++++----- R/batch_operations.R | 38 R/batch_service.R | 7 R/ec2_operations.R | 378 ++--- R/ec2_service.R | 7 R/ec2instanceconnect_operations.R | 2 R/ec2instanceconnect_service.R | 7 R/ecr_operations.R | 18 R/ecr_service.R | 7 R/ecs_operations.R | 112 - R/ecs_service.R | 7 R/eks_operations.R | 10 R/eks_service.R | 7 R/elasticbeanstalk_operations.R | 80 - R/elasticbeanstalk_service.R | 7 R/lambda_operations.R | 46 R/lambda_service.R | 7 R/lightsail_operations.R | 4 R/lightsail_service.R | 7 R/serverlessapplicationrepository_operations.R | 8 R/serverlessapplicationrepository_service.R | 7 man/batch.Rd | 4 man/batch_cancel_job.Rd | 4 man/batch_create_compute_environment.Rd | 6 man/batch_create_job_queue.Rd | 6 man/batch_delete_compute_environment.Rd | 4 man/batch_delete_job_queue.Rd | 4 man/batch_deregister_job_definition.Rd | 4 man/batch_describe_compute_environments.Rd | 4 man/batch_describe_job_definitions.Rd | 4 man/batch_describe_job_queues.Rd | 4 man/batch_describe_jobs.Rd | 4 man/batch_list_jobs.Rd | 6 man/batch_register_job_definition.Rd | 4 man/batch_submit_job.Rd | 4 man/batch_terminate_job.Rd | 4 man/batch_update_compute_environment.Rd | 4 man/batch_update_job_queue.Rd | 4 man/ec2.Rd | 2 man/ec2_accept_vpc_endpoint_connections.Rd | 2 man/ec2_allocate_address.Rd | 6 man/ec2_allocate_hosts.Rd | 2 man/ec2_assign_private_ip_addresses.Rd | 6 man/ec2_associate_address.Rd | 6 man/ec2_associate_dhcp_options.Rd | 6 man/ec2_associate_iam_instance_profile.Rd | 4 man/ec2_associate_route_table.Rd | 4 man/ec2_attach_internet_gateway.Rd | 4 man/ec2_attach_network_interface.Rd | 4 man/ec2_attach_volume.Rd | 4 man/ec2_authorize_security_group_egress.Rd | 6 man/ec2_authorize_security_group_ingress.Rd | 8 man/ec2_cancel_spot_fleet_requests.Rd | 6 man/ec2_cancel_spot_instance_requests.Rd | 4 man/ec2_confirm_product_instance.Rd | 4 man/ec2_copy_image.Rd | 2 man/ec2_copy_snapshot.Rd | 2 man/ec2_create_capacity_reservation.Rd | 2 man/ec2_create_client_vpn_endpoint.Rd | 2 man/ec2_create_customer_gateway.Rd | 4 man/ec2_create_dhcp_options.Rd | 4 man/ec2_create_fleet.Rd | 2 man/ec2_create_fpga_image.Rd | 2 man/ec2_create_image.Rd | 4 man/ec2_create_internet_gateway.Rd | 4 man/ec2_create_key_pair.Rd | 4 man/ec2_create_launch_template.Rd | 2 man/ec2_create_launch_template_version.Rd | 2 man/ec2_create_nat_gateway.Rd | 4 man/ec2_create_network_acl.Rd | 4 man/ec2_create_network_acl_entry.Rd | 4 man/ec2_create_network_interface.Rd | 4 man/ec2_create_placement_group.Rd | 4 man/ec2_create_route.Rd | 4 man/ec2_create_route_table.Rd | 4 man/ec2_create_security_group.Rd | 8 man/ec2_create_snapshot.Rd | 2 man/ec2_create_snapshots.Rd | 2 man/ec2_create_spot_datafeed_subscription.Rd | 4 man/ec2_create_subnet.Rd | 4 man/ec2_create_tags.Rd | 4 man/ec2_create_traffic_mirror_filter.Rd | 2 man/ec2_create_traffic_mirror_session.Rd | 2 man/ec2_create_traffic_mirror_target.Rd | 2 man/ec2_create_transit_gateway.Rd | 2 man/ec2_create_transit_gateway_multicast_domain.Rd | 2 man/ec2_create_transit_gateway_peering_attachment.Rd | 2 man/ec2_create_transit_gateway_route_table.Rd | 2 man/ec2_create_transit_gateway_vpc_attachment.Rd | 2 man/ec2_create_volume.Rd | 4 man/ec2_create_vpc.Rd | 4 man/ec2_create_vpc_endpoint.Rd | 2 man/ec2_create_vpc_endpoint_connection_notification.Rd | 2 man/ec2_create_vpc_endpoint_service_configuration.Rd | 2 man/ec2_delete_customer_gateway.Rd | 4 man/ec2_delete_dhcp_options.Rd | 4 man/ec2_delete_internet_gateway.Rd | 4 man/ec2_delete_key_pair.Rd | 4 man/ec2_delete_launch_template.Rd | 4 man/ec2_delete_launch_template_versions.Rd | 4 man/ec2_delete_nat_gateway.Rd | 4 man/ec2_delete_network_acl.Rd | 4 man/ec2_delete_network_acl_entry.Rd | 4 man/ec2_delete_network_interface.Rd | 4 man/ec2_delete_placement_group.Rd | 4 man/ec2_delete_route.Rd | 4 man/ec2_delete_route_table.Rd | 4 man/ec2_delete_security_group.Rd | 4 man/ec2_delete_snapshot.Rd | 4 man/ec2_delete_spot_datafeed_subscription.Rd | 4 man/ec2_delete_subnet.Rd | 4 man/ec2_delete_tags.Rd | 4 man/ec2_delete_volume.Rd | 4 man/ec2_delete_vpc.Rd | 4 man/ec2_describe_account_attributes.Rd | 4 man/ec2_describe_addresses.Rd | 6 man/ec2_describe_availability_zones.Rd | 4 man/ec2_describe_bundle_tasks.Rd | 2 man/ec2_describe_customer_gateways.Rd | 4 man/ec2_describe_dhcp_options.Rd | 4 man/ec2_describe_egress_only_internet_gateways.Rd | 2 man/ec2_describe_export_tasks.Rd | 2 man/ec2_describe_fleets.Rd | 2 man/ec2_describe_iam_instance_profile_associations.Rd | 4 man/ec2_describe_image_attribute.Rd | 4 man/ec2_describe_images.Rd | 4 man/ec2_describe_instance_attribute.Rd | 8 man/ec2_describe_instance_status.Rd | 4 man/ec2_describe_instances.Rd | 6 man/ec2_describe_internet_gateways.Rd | 4 man/ec2_describe_key_pairs.Rd | 2 man/ec2_describe_launch_template_versions.Rd | 4 man/ec2_describe_launch_templates.Rd | 4 man/ec2_describe_moving_addresses.Rd | 4 man/ec2_describe_nat_gateways.Rd | 4 man/ec2_describe_network_acls.Rd | 4 man/ec2_describe_network_interface_attribute.Rd | 10 man/ec2_describe_network_interfaces.Rd | 2 man/ec2_describe_placement_groups.Rd | 2 man/ec2_describe_regions.Rd | 4 man/ec2_describe_route_tables.Rd | 4 man/ec2_describe_scheduled_instance_availability.Rd | 4 man/ec2_describe_scheduled_instances.Rd | 4 man/ec2_describe_security_group_references.Rd | 4 man/ec2_describe_security_groups.Rd | 6 man/ec2_describe_snapshot_attribute.Rd | 4 man/ec2_describe_snapshots.Rd | 8 man/ec2_describe_spot_datafeed_subscription.Rd | 4 man/ec2_describe_spot_fleet_instances.Rd | 4 man/ec2_describe_spot_fleet_request_history.Rd | 4 man/ec2_describe_spot_fleet_requests.Rd | 4 man/ec2_describe_spot_instance_requests.Rd | 4 man/ec2_describe_spot_price_history.Rd | 6 man/ec2_describe_subnets.Rd | 4 man/ec2_describe_tags.Rd | 4 man/ec2_describe_volume_attribute.Rd | 4 man/ec2_describe_volume_status.Rd | 6 man/ec2_describe_volumes.Rd | 6 man/ec2_describe_vpc_attribute.Rd | 6 man/ec2_describe_vpc_endpoint_connection_notifications.Rd | 2 man/ec2_describe_vpc_endpoint_connections.Rd | 2 man/ec2_describe_vpc_endpoint_service_configurations.Rd | 2 man/ec2_describe_vpc_endpoint_service_permissions.Rd | 2 man/ec2_describe_vpc_endpoint_services.Rd | 2 man/ec2_describe_vpc_endpoints.Rd | 2 man/ec2_describe_vpcs.Rd | 4 man/ec2_detach_internet_gateway.Rd | 4 man/ec2_detach_network_interface.Rd | 4 man/ec2_detach_volume.Rd | 4 man/ec2_disable_vgw_route_propagation.Rd | 4 man/ec2_disassociate_address.Rd | 6 man/ec2_disassociate_iam_instance_profile.Rd | 4 man/ec2_disassociate_route_table.Rd | 4 man/ec2_enable_vgw_route_propagation.Rd | 4 man/ec2_enable_volume_io.Rd | 4 man/ec2_get_console_output.Rd | 4 man/ec2_get_launch_template_data.Rd | 4 man/ec2_import_image.Rd | 2 man/ec2_import_snapshot.Rd | 2 man/ec2_modify_ebs_default_kms_key_id.Rd | 2 man/ec2_modify_image_attribute.Rd | 6 man/ec2_modify_instance_attribute.Rd | 6 man/ec2_modify_launch_template.Rd | 4 man/ec2_modify_network_interface_attribute.Rd | 10 man/ec2_modify_snapshot_attribute.Rd | 6 man/ec2_modify_spot_fleet_request.Rd | 6 man/ec2_modify_subnet_attribute.Rd | 4 man/ec2_modify_transit_gateway_vpc_attachment.Rd | 2 man/ec2_modify_volume_attribute.Rd | 4 man/ec2_modify_vpc_attribute.Rd | 6 man/ec2_modify_vpc_endpoint.Rd | 2 man/ec2_modify_vpc_endpoint_service_configuration.Rd | 2 man/ec2_modify_vpc_endpoint_service_permissions.Rd | 2 man/ec2_move_address_to_vpc.Rd | 4 man/ec2_purchase_scheduled_instances.Rd | 4 man/ec2_reboot_instances.Rd | 4 man/ec2_release_address.Rd | 6 man/ec2_replace_network_acl_association.Rd | 4 man/ec2_replace_network_acl_entry.Rd | 4 man/ec2_replace_route.Rd | 4 man/ec2_replace_route_table_association.Rd | 4 man/ec2_request_spot_fleet.Rd | 8 man/ec2_request_spot_instances.Rd | 6 man/ec2_reset_image_attribute.Rd | 4 man/ec2_reset_instance_attribute.Rd | 4 man/ec2_reset_snapshot_attribute.Rd | 4 man/ec2_restore_address_to_classic.Rd | 4 man/ec2_run_instances.Rd | 2 man/ec2_run_scheduled_instances.Rd | 6 man/ec2_start_instances.Rd | 4 man/ec2_start_vpc_endpoint_service_private_dns_verification.Rd | 2 man/ec2_stop_instances.Rd | 4 man/ec2_terminate_instances.Rd | 4 man/ec2_unassign_private_ip_addresses.Rd | 4 man/ec2_update_security_group_rule_descriptions_egress.Rd | 4 man/ec2_update_security_group_rule_descriptions_ingress.Rd | 4 man/ec2instanceconnect.Rd | 4 man/ec2instanceconnect_send_ssh_public_key.Rd | 4 man/ecr.Rd | 2 man/ecr_batch_delete_image.Rd | 4 man/ecr_batch_get_image.Rd | 4 man/ecr_create_repository.Rd | 4 man/ecr_delete_repository.Rd | 4 man/ecr_delete_repository_policy.Rd | 4 man/ecr_describe_repositories.Rd | 4 man/ecr_get_authorization_token.Rd | 4 man/ecr_get_repository_policy.Rd | 4 man/ecr_list_images.Rd | 4 man/ecs.Rd | 2 man/ecs_create_cluster.Rd | 4 man/ecs_create_service.Rd | 18 man/ecs_delete_account_setting.Rd | 6 man/ecs_delete_cluster.Rd | 4 man/ecs_delete_service.Rd | 4 man/ecs_deregister_container_instance.Rd | 4 man/ecs_describe_clusters.Rd | 4 man/ecs_describe_container_instances.Rd | 4 man/ecs_describe_services.Rd | 4 man/ecs_describe_task_definition.Rd | 4 man/ecs_describe_tasks.Rd | 4 man/ecs_list_account_settings.Rd | 6 man/ecs_list_clusters.Rd | 4 man/ecs_list_container_instances.Rd | 4 man/ecs_list_services.Rd | 4 man/ecs_list_tags_for_resource.Rd | 4 man/ecs_list_task_definition_families.Rd | 6 man/ecs_list_task_definitions.Rd | 6 man/ecs_list_tasks.Rd | 6 man/ecs_put_account_setting.Rd | 6 man/ecs_put_account_setting_default.Rd | 4 man/ecs_put_cluster_capacity_providers.Rd | 2 man/ecs_register_task_definition.Rd | 2 man/ecs_run_task.Rd | 4 man/ecs_tag_resource.Rd | 4 man/ecs_untag_resource.Rd | 4 man/ecs_update_container_instances_state.Rd | 10 man/ecs_update_service.Rd | 12 man/eks.Rd | 4 man/eks_create_cluster.Rd | 2 man/eks_create_fargate_profile.Rd | 2 man/eks_delete_cluster.Rd | 4 man/eks_delete_fargate_profile.Rd | 2 man/eks_describe_cluster.Rd | 4 man/eks_list_clusters.Rd | 4 man/eks_list_tags_for_resource.Rd | 4 man/eks_update_cluster_config.Rd | 2 man/elasticbeanstalk.Rd | 2 man/elasticbeanstalk_abort_environment_update.Rd | 4 man/elasticbeanstalk_check_dns_availability.Rd | 4 man/elasticbeanstalk_create_application.Rd | 4 man/elasticbeanstalk_create_application_version.Rd | 4 man/elasticbeanstalk_create_configuration_template.Rd | 4 man/elasticbeanstalk_create_environment.Rd | 4 man/elasticbeanstalk_create_storage_location.Rd | 4 man/elasticbeanstalk_delete_application.Rd | 4 man/elasticbeanstalk_delete_application_version.Rd | 4 man/elasticbeanstalk_delete_configuration_template.Rd | 4 man/elasticbeanstalk_delete_environment_configuration.Rd | 4 man/elasticbeanstalk_describe_application_versions.Rd | 4 man/elasticbeanstalk_describe_applications.Rd | 4 man/elasticbeanstalk_describe_configuration_options.Rd | 4 man/elasticbeanstalk_describe_configuration_settings.Rd | 4 man/elasticbeanstalk_describe_environment_health.Rd | 4 man/elasticbeanstalk_describe_environment_resources.Rd | 4 man/elasticbeanstalk_describe_environments.Rd | 4 man/elasticbeanstalk_describe_events.Rd | 4 man/elasticbeanstalk_describe_instances_health.Rd | 4 man/elasticbeanstalk_list_available_solution_stacks.Rd | 4 man/elasticbeanstalk_rebuild_environment.Rd | 4 man/elasticbeanstalk_request_environment_info.Rd | 4 man/elasticbeanstalk_restart_app_server.Rd | 4 man/elasticbeanstalk_retrieve_environment_info.Rd | 4 man/elasticbeanstalk_swap_environment_cnam_es.Rd | 4 man/elasticbeanstalk_terminate_environment.Rd | 4 man/elasticbeanstalk_update_application.Rd | 4 man/elasticbeanstalk_update_application_version.Rd | 4 man/elasticbeanstalk_update_configuration_template.Rd | 4 man/elasticbeanstalk_update_environment.Rd | 6 man/elasticbeanstalk_update_tags_for_resource.Rd | 17 man/elasticbeanstalk_validate_configuration_settings.Rd | 6 man/lambda.Rd | 2 man/lambda_add_permission.Rd | 4 man/lambda_create_function.Rd | 4 man/lambda_delete_alias.Rd | 4 man/lambda_delete_event_source_mapping.Rd | 4 man/lambda_delete_function.Rd | 4 man/lambda_get_account_settings.Rd | 4 man/lambda_get_alias.Rd | 4 man/lambda_get_event_source_mapping.Rd | 4 man/lambda_get_function.Rd | 4 man/lambda_get_function_configuration.Rd | 4 man/lambda_get_policy.Rd | 4 man/lambda_invoke.Rd | 4 man/lambda_invoke_async.Rd | 4 man/lambda_list_aliases.Rd | 4 man/lambda_list_functions.Rd | 4 man/lambda_list_versions_by_function.Rd | 4 man/lambda_publish_version.Rd | 4 man/lambda_remove_permission.Rd | 4 man/lambda_update_alias.Rd | 4 man/lambda_update_event_source_mapping.Rd | 4 man/lambda_update_function_code.Rd | 4 man/lambda_update_function_configuration.Rd | 4 man/lightsail.Rd | 2 man/lightsail_copy_snapshot.Rd | 2 man/lightsail_create_disk_from_snapshot.Rd | 2 man/lightsail_create_instances_from_snapshot.Rd | 2 man/lightsail_delete_auto_snapshot.Rd | 2 man/lightsail_disable_add_on.Rd | 2 man/lightsail_get_auto_snapshots.Rd | 2 man/lightsail_update_relational_database.Rd | 2 man/lightsail_update_relational_database_parameters.Rd | 2 man/serverlessapplicationrepository.Rd | 2 man/serverlessapplicationrepository_create_application.Rd | 2 man/serverlessapplicationrepository_update_application.Rd | 2 336 files changed, 1347 insertions(+), 1356 deletions(-)
Title: Tidy Up Date/Time Ranges
Description: Collapse, partition, combine, fill gaps in and expand date/time ranges.
Author: Aljaz Jelenko [aut, cre]
Maintainer: Aljaz Jelenko <aljaz.jelenko@amis.net>
Diff between neatRanges versions 0.1.2 dated 2020-02-28 and 0.1.3 dated 2020-03-29
DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ NEWS.md | 32 +++++++++++++++++++++++++------- R/RcppExports.R | 22 +++++++++++----------- R/collapse_ranges.R | 2 +- R/expand_variants.R | 2 +- R/fill_ranges.R | 2 +- 7 files changed, 48 insertions(+), 30 deletions(-)
Title: Bayesian Analysis of qRT-PCR Data
Description: Quantitative RT-PCR data are analyzed using generalized linear mixed models based on lognormal-Poisson error distribution, fitted using MCMC. Control genes are not required but can be incorporated as Bayesian priors or, when template abundances correlate with conditions, as trackers of global effects (common to all genes). The package also implements a lognormal model for higher-abundance data and a "classic" model involving multi-gene normalization on a by-sample basis. Several plotting functions are included to extract and visualize results. The detailed tutorial is available here: <https://matzlab.weebly.com/uploads/7/6/2/2/76229469/mcmc.qpcr.tutorial.v1.2.4.pdf>.
Author: Mikhail V. Matz
Maintainer: Mikhail V. Matz <matz@utexas.edu>
Diff between MCMC.qpcr versions 1.2.3 dated 2019-02-04 and 1.2.4 dated 2020-03-29
DESCRIPTION | 10 +++++----- MD5 | 13 ++++++++----- R/HPDsummary_cont.R |only R/cq2log.R | 6 +++--- R/normalize.qpcr.R | 4 ++-- R/padj.hpdsummary.R |only man/MCMC.qpcr-package.Rd | 5 ++++- man/cq2log.Rd | 5 ++++- man/padj.hpdsummary.Rd |only 9 files changed, 26 insertions(+), 17 deletions(-)