Title: Assign Treatments, Power Calculations, Balances, Impact
Evaluation of Experiments
Description: Assists in the whole process of designing and evaluating Randomized Control Trials.
Robust treatment assignment by strata/blocks, that handles misfits;
Power calculations of the minimum detectable treatment effect
Balance tables of T-test of covariates;
Balance Regression: (treatment ~ all x variables) with F-test of null model;
Impact_evaluation: Impact evaluation regressions. This function
gives you the option to include control_vars, fixed effect variables,
cluster variables (for robust SE), multiple endogenous variables and
multiple heterogeneous variables (to test treatment effect heterogeneity)
summary_statistics: Function that creates a summary statistics table with statistics
rank observations in n groups: Creates a factor variable with n groups. Each group has
a min and max label attach to each category.
Athey, Susan, and Guido W. Imbens (2017) <arXiv:1607.00698>.
Author: Isidoro Garcia-Urquieta [aut, cre]
Maintainer: Isidoro Garcia-Urquieta <isidoro.gu@gmail.com>
Diff between RCT versions 1.0.0 dated 2020-04-03 and 1.0.1 dated 2020-04-03
DESCRIPTION | 7 ++++--- MD5 | 2 +- 2 files changed, 5 insertions(+), 4 deletions(-)
Title: Cross-Platform File System Operations Based on 'libuv'
Description: A cross-platform interface to file system operations, built on
top of the 'libuv' C library.
Author: Jim Hester [aut, cre],
Hadley Wickham [aut],
libuv project contributors [cph] (libuv library),
Joyent, Inc. and other Node contributors [cph] (libuv library),
RStudio [cph, fnd]
Maintainer: Jim Hester <james.f.hester@gmail.com>
Diff between fs versions 1.4.0 dated 2020-03-31 and 1.4.1 dated 2020-04-03
DESCRIPTION | 6 +-- MD5 | 48 ++++++++++++------------- NEWS.md | 2 + R/access.R | 2 - R/copy.R | 2 - R/create.R | 12 +++--- R/delete.R | 8 ++-- R/file.R | 16 ++++---- R/fs_path.R | 2 - R/fs_perms.R | 4 +- R/id.R | 4 +- R/link.R | 2 - R/list.R | 2 - R/package.R | 2 - R/path.R | 14 +++---- R/stat.R | 2 - src/dir.cc | 6 +-- src/file.cc | 20 +++++----- src/fs.cc | 2 - src/getmode.cc | 6 +-- src/getmode.h | 6 +-- src/id.cc | 8 ++-- src/init.cc | 108 ++++++++++++++++++++++++++++----------------------------- src/link.cc | 6 +-- src/path.cc | 8 ++-- 25 files changed, 150 insertions(+), 148 deletions(-)
Title: Various Methods to Estimate the AUC
Description: Estimate the AUC using a variety of methods as follows:
(1) frequentist nonparametric methods based on the Mann-Whitney statistic or kernel methods.
(2) frequentist parametric methods using the likelihood ratio test based on higher-order
asymptotic results, the signed log-likelihood ratio test, the Wald test,
or the approximate ''t'' solution to the Behrens-Fisher problem.
(3) Bayesian parametric MCMC methods.
Author: Dai Feng [aut, cre], Damjan Manevski [auc], Maja Pohar Perme [auc]
Maintainer: Dai Feng <daifeng.stat@gmail.com>
Diff between auRoc versions 0.2-0 dated 2019-01-13 and 0.2-1 dated 2020-04-03
DESCRIPTION | 9 +++++---- MD5 | 5 +++-- R/auc.para.bayes.R | 11 ++++------- data/petBrainGlioma.R |only 4 files changed, 12 insertions(+), 13 deletions(-)
Title: Simulation of Weed Population Dynamics
Description: An environment to simulate the development of annual plant populations with regard to population dynamics and genetics, especially herbicide resistance. It combines genetics on the individual level (Renton et al. 2011) with a stochastic development on the population level (Daedlow, 2015).
Renton, M, Diggle, A, Manalil, S and Powles, S (2011) <doi:10.1016/j.jtbi.2011.05.010>
Daedlow, Daniel (2015, doctoral dissertation: University of Rostock, Faculty of Agriculture and Environmental Sciences.)
Author: Christoph v. Redwitz [aut, cre],
Friederike de Mol [aut]
Maintainer: Christoph v. Redwitz <christoph.redwitz@posteo.de>
Diff between PROSPER versions 0.3.0 dated 2018-10-30 and 0.3.2 dated 2020-04-03
PROSPER-0.3.0/PROSPER/R/struc_preparation.R |only PROSPER-0.3.0/PROSPER/man/struc_preparation.Rd |only PROSPER-0.3.2/PROSPER/DESCRIPTION | 10 +- PROSPER-0.3.2/PROSPER/MD5 | 83 ++++++++++---------- PROSPER-0.3.2/PROSPER/NAMESPACE | 2 PROSPER-0.3.2/PROSPER/R/S4-Klasse-Methode-PROSPER.R | 12 +- PROSPER-0.3.2/PROSPER/R/create_prosper.R |only PROSPER-0.3.2/PROSPER/R/gen_check.R |only PROSPER-0.3.2/PROSPER/R/gen_diploid.R | 73 ++++++++++++----- PROSPER-0.3.2/PROSPER/R/gen_freq.R | 35 ++++++-- PROSPER-0.3.2/PROSPER/R/herb_check.R |only PROSPER-0.3.2/PROSPER/R/intern_herbicide.R | 2 PROSPER-0.3.2/PROSPER/R/mod_check.R |only PROSPER-0.3.2/PROSPER/R/pop_germc.R | 2 PROSPER-0.3.2/PROSPER/R/pop_reprod.R | 2 PROSPER-0.3.2/PROSPER/R/pop_step.R | 45 ++++++++-- PROSPER-0.3.2/PROSPER/R/prosper-models.R | 2 PROSPER-0.3.2/PROSPER/R/prosper.ECHCG.R | 23 +++-- PROSPER-0.3.2/PROSPER/R/prosper.GALAP.R | 20 +++- PROSPER-0.3.2/PROSPER/R/prosper.LOLRI.R | 24 +++-- PROSPER-0.3.2/PROSPER/R/quanti.R | 48 +++++++++-- PROSPER-0.3.2/PROSPER/R/sel_herb.R | 18 +++- PROSPER-0.3.2/PROSPER/R/sel_resist.R | 15 +-- PROSPER-0.3.2/PROSPER/R/struc_endSim.R | 6 - PROSPER-0.3.2/PROSPER/R/struc_preparation2.R |only PROSPER-0.3.2/PROSPER/R/struc_saveSimData.R | 38 +++++++-- PROSPER-0.3.2/PROSPER/man/PROSPER-pkg.Rd | 1 PROSPER-0.3.2/PROSPER/man/gen_check.Rd |only PROSPER-0.3.2/PROSPER/man/gen_diploid.Rd | 16 +++ PROSPER-0.3.2/PROSPER/man/gen_freq.Rd | 6 - PROSPER-0.3.2/PROSPER/man/herb_check.Rd |only PROSPER-0.3.2/PROSPER/man/intern_SimData.Rd | 3 PROSPER-0.3.2/PROSPER/man/intern_herbicide.Rd | 2 PROSPER-0.3.2/PROSPER/man/mod_check.Rd |only PROSPER-0.3.2/PROSPER/man/plot.Rd | 1 PROSPER-0.3.2/PROSPER/man/pop_germc.Rd | 2 PROSPER-0.3.2/PROSPER/man/pop_reprod.Rd | 5 - PROSPER-0.3.2/PROSPER/man/pop_step.Rd | 12 ++ PROSPER-0.3.2/PROSPER/man/prosper-models.Rd | 76 +++++++++++++----- PROSPER-0.3.2/PROSPER/man/prosper.Rd | 12 +- PROSPER-0.3.2/PROSPER/man/quanti.Rd | 19 +++- PROSPER-0.3.2/PROSPER/man/sel_herb.Rd | 7 - PROSPER-0.3.2/PROSPER/man/sel_resist.Rd | 8 - PROSPER-0.3.2/PROSPER/man/struc_addSimData.Rd | 1 PROSPER-0.3.2/PROSPER/man/struc_preparation2.Rd |only PROSPER-0.3.2/PROSPER/man/struc_saveSimData.Rd | 11 -- PROSPER-0.3.2/PROSPER/man/summary.Rd | 1 PROSPER-0.3.2/PROSPER/man/weed-parameters.Rd | 6 - 48 files changed, 439 insertions(+), 210 deletions(-)
Title: Asymmetric Matrix Plotting in 'ggplot2'
Description: Plots a symmetric matrix with three different fill
aesthetics for the top-left and bottom-right triangles and along the
diagonal. It operates within the Grammar of Graphics paradigm implemented
in 'ggplot2'.
Author: Joshua H Cook [aut, cre] (<https://orcid.org/0000-0001-9815-6879>)
Maintainer: Joshua H Cook <joshuacook0023@gmail.com>
Diff between ggasym versions 0.1.2 dated 2019-11-21 and 0.1.3 dated 2020-04-03
DESCRIPTION | 18 +-- MD5 | 28 ++-- NEWS.md | 5 R/asymmetrise.R | 2 build/vignette.rds |binary inst/doc/ggasym-corrr.R | 14 +- inst/doc/ggasym-corrr.html | 145 ++++++++++++------------ inst/doc/ggasym-stats.R | 16 +- inst/doc/ggasym-stats.html | 221 +++++++++++++++++++------------------- man/GeomAsymmat.Rd | 4 man/continuous_scale_asym.Rd | 3 man/geom_asymmat.Rd | 13 +- man/ggasym.Rd | 1 man/scale_gradient.Rd | 182 +++++++++++++++++++++++-------- tests/testthat/test-asymmetrise.R | 11 + 15 files changed, 382 insertions(+), 281 deletions(-)
Title: Space-Time Estimation of Forest Variables using the FIA Database
Description: The goal of 'rFIA' is to increase the accessibility and use of the United States Forest Services (USFS) Forest Inventory and Analysis (FIA) Database by providing a user-friendly, open source toolkit to easily query and analyze FIA Data. Designed to accommodate a wide range of potential user objectives, 'rFIA' simplifies the estimation of forest variables from the FIA Database and allows all R users (experts and newcomers alike) to unlock the flexibility inherent to the Enhanced FIA design. Specifically, 'rFIA' improves accessibility to the spatio-temporal estimation capacity of the FIA Database by producing space-time indexed summaries of forest variables within user-defined population boundaries. Direct integration with other popular R packages (e.g., 'dplyr', 'tidyr', and 'sf') facilitates efficient space-time query and data summary, and supports common data representations and API design. The package implements design-based estimation procedures outlined by Bechtold & Patterson (2005) <doi:10.2737/SRS-GTR-80>, and has been validated against estimates and sampling errors produced by FIA 'EVALIDator'. Current development is focused on the implementation of spatially-enabled model-assisted estimators to improve population, change, and ratio estimates.
Author: Hunter Stanke [aut, cre],
Andrew Finley [aut]
Maintainer: Hunter Stanke <stankehu@msu.edu>
Diff between rFIA versions 0.2.0 dated 2020-01-09 and 0.2.1 dated 2020-04-03
DESCRIPTION | 6 MD5 | 108 NAMESPACE | 107 R/areaHelper.R | 406 - R/areaNew.R | 986 +-- R/biomassHelper.R | 1242 ++-- R/biomassNew.R | 1268 ++--- R/diMort.R | 2470 ++++----- R/diMortHelper.R | 1889 ++++--- R/diversityHelper.R | 686 +- R/diversityNew.R | 1140 ++-- R/dwmHelper.R | 1610 +++--- R/dwmNew.R | 1344 ++--- R/fsi.R |only R/fsiHelper.R |only R/functionsFIA.R |12581 +++++++++++++++++++++++++------------------------- R/globalVars.R | 339 - R/growMortHelper.R | 2013 +++++--- R/growMortNew.R | 1461 ++--- R/invasiveHelper.R | 708 +- R/invasiveNew.R | 1074 ++-- R/mcHelper.R |only R/mortComp.R |only R/plotFIA.R | 594 +- R/plotSI.R |only R/readFIAHelper.R | 148 R/seedHelper.R | 1356 ++--- R/seedlingNew.R | 1128 ++-- R/standStructHelper.R | 718 +- R/standStructNew.R | 1088 ++-- R/sustIndex.R |only R/sustIndexHelper.R |only R/tpaHelper.R | 1468 ++--- R/tpaHelper_temp.R | 512 +- R/tpaNew.R | 1236 ++-- R/vitalRatesHelper.R | 1445 ++--- R/vitalRatesNew.R | 1352 ++--- README.md | 526 +- data/datalist | 4 man/area.Rd | 224 man/biomass.Rd | 314 - man/clipFIA.Rd | 126 man/countiesRI.Rd | 34 man/diversity.Rd | 304 - man/dwm.Rd | 264 - man/fiaRI.Rd | 52 man/findEVALID.Rd | 106 man/fsi.Rd |only man/getFIA.Rd | 114 man/growMort.Rd | 296 - man/invasive.Rd | 244 man/makeClasses.Rd | 126 man/plotFIA.Rd | 266 - man/readFIA.Rd | 138 man/seedling.Rd | 264 - man/standStruct.Rd | 292 - man/tpa.Rd | 298 - man/vitalRates.Rd | 292 - man/writeFIA.Rd | 90 59 files changed, 24068 insertions(+), 22789 deletions(-)
Title: Generalized Additive Mixed Models using 'mgcv' and 'lme4'
Description: Estimate generalized additive mixed models via a version of
function gamm() from 'mgcv', using 'lme4' for estimation.
Author: Simon Wood, Fabian Scheipl
Maintainer: Simon Wood <simon.wood@r-project.org>
Diff between gamm4 versions 0.2-5 dated 2017-07-25 and 0.2-6 dated 2020-04-03
ChangeLog | 4 DESCRIPTION | 9 -- MD5 | 6 - R/gamm4.r | 258 ------------------------------------------------------------ 4 files changed, 14 insertions(+), 263 deletions(-)
Title: Open Trade Statistics API Wrapper and Utility Program
Description: Access 'Open Trade Statistics' API from R to download international trade data.
Author: Mauricio Vargas [aut, cre, cph]
(<https://orcid.org/0000-0003-1017-7574>),
Joshua Kunst [ctb] (contributed to different parts of the pre-release
code),
Natalia de los Santos [ctb] (proposed improvements to default
parameters),
Elio Campitelli [ctb] (wrote client-side caching function),
Emily Riederer [rev] (reviewed the package for rOpenSci, see
https://github.com/ropensci/onboarding/issues/274),
Mark Padgham [rev] (reviewed the package for rOpenSci, see
https://github.com/ropensci/onboarding/issues/274),
Amanda Dobbyn [rev] (reviewed an archived package that evolved into the
current package for rOpenSci, see
https://github.com/ropensci/onboarding/issues/217),
Jorge Cimentada [rev] (reviewed an archived package that evolved into
the current package for rOpenSci, see
https://github.com/ropensci/onboarding/issues/217),
UN Comtrade [dtc],
The World Bank [dtc],
Center for International Development at Harvard University [dtc],
The Observatory of Economic Complexity [dtc]
Maintainer: Mauricio Vargas <mvargas@dcc.uchile.cl>
Diff between tradestatistics versions 0.2.7 dated 2019-12-04 and 1.0 dated 2020-04-03
tradestatistics-0.2.7/tradestatistics/R/ots_country_code.R |only tradestatistics-0.2.7/tradestatistics/R/ots_product_code.R |only tradestatistics-0.2.7/tradestatistics/data/ots_communities.rda |only tradestatistics-0.2.7/tradestatistics/data/ots_product_shortnames.rda |only tradestatistics-0.2.7/tradestatistics/inst/doc/creating-datasets.R |only tradestatistics-0.2.7/tradestatistics/inst/doc/creating-datasets.Rmd |only tradestatistics-0.2.7/tradestatistics/inst/doc/creating-datasets.html |only tradestatistics-0.2.7/tradestatistics/man/ots_communities.Rd |only tradestatistics-0.2.7/tradestatistics/man/ots_product_shortnames.Rd |only tradestatistics-0.2.7/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_1962.yml |only tradestatistics-0.2.7/tradestatistics/vignettes/creating-datasets.Rmd |only tradestatistics-0.2.7/tradestatistics/vignettes/creating-datasets.md |only tradestatistics-1.0/tradestatistics/DESCRIPTION | 24 tradestatistics-1.0/tradestatistics/MD5 | 104 tradestatistics-1.0/tradestatistics/NAMESPACE | 52 tradestatistics-1.0/tradestatistics/NEWS.md | 130 tradestatistics-1.0/tradestatistics/R/ots_cache.R |only tradestatistics-1.0/tradestatistics/R/ots_create_tidy_data.R | 923 +- tradestatistics-1.0/tradestatistics/R/ots_inflation_adjustment.R | 190 tradestatistics-1.0/tradestatistics/R/ots_read_from_api.R | 261 tradestatistics-1.0/tradestatistics/R/ots_strings_processing.R |only tradestatistics-1.0/tradestatistics/R/tradestatistics-package.R | 17 tradestatistics-1.0/tradestatistics/build/vignette.rds |binary tradestatistics-1.0/tradestatistics/data/ots_countries.rda |binary tradestatistics-1.0/tradestatistics/data/ots_groups.rda |only tradestatistics-1.0/tradestatistics/data/ots_inflation.rda |binary tradestatistics-1.0/tradestatistics/data/ots_products.rda |binary tradestatistics-1.0/tradestatistics/data/ots_products_shortnames.rda |only tradestatistics-1.0/tradestatistics/data/ots_sections.rda |only tradestatistics-1.0/tradestatistics/data/ots_sections_colors.rda |only tradestatistics-1.0/tradestatistics/data/ots_sections_names.rda |only tradestatistics-1.0/tradestatistics/data/ots_sections_shortnames.rda |only tradestatistics-1.0/tradestatistics/data/ots_tables.rda |binary tradestatistics-1.0/tradestatistics/inst/doc/basic-usage.R | 220 tradestatistics-1.0/tradestatistics/inst/doc/basic-usage.Rmd | 472 - tradestatistics-1.0/tradestatistics/inst/doc/basic-usage.html | 3823 ++++++++-- tradestatistics-1.0/tradestatistics/inst/references.bib | 194 tradestatistics-1.0/tradestatistics/man/ots_cache.Rd |only tradestatistics-1.0/tradestatistics/man/ots_countries.Rd | 54 tradestatistics-1.0/tradestatistics/man/ots_country_code.Rd | 56 tradestatistics-1.0/tradestatistics/man/ots_create_tidy_data.Rd | 160 tradestatistics-1.0/tradestatistics/man/ots_create_tidy_data_memoised.Rd |only tradestatistics-1.0/tradestatistics/man/ots_create_tidy_data_unmemoised.Rd |only tradestatistics-1.0/tradestatistics/man/ots_groups.Rd |only tradestatistics-1.0/tradestatistics/man/ots_inflation.Rd | 50 tradestatistics-1.0/tradestatistics/man/ots_inflation_adjustment.Rd | 62 tradestatistics-1.0/tradestatistics/man/ots_product_code.Rd | 60 tradestatistics-1.0/tradestatistics/man/ots_product_section.Rd |only tradestatistics-1.0/tradestatistics/man/ots_products.Rd | 47 tradestatistics-1.0/tradestatistics/man/ots_products_shortnames.Rd |only tradestatistics-1.0/tradestatistics/man/ots_read_from_api.Rd | 118 tradestatistics-1.0/tradestatistics/man/ots_sections.Rd |only tradestatistics-1.0/tradestatistics/man/ots_sections_colors.Rd |only tradestatistics-1.0/tradestatistics/man/ots_sections_names.Rd |only tradestatistics-1.0/tradestatistics/man/ots_sections_shortnames.Rd |only tradestatistics-1.0/tradestatistics/man/ots_tables.Rd | 44 tradestatistics-1.0/tradestatistics/man/tradestatistics-package.Rd | 74 tradestatistics-1.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_all_1964.yml |only tradestatistics-1.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_1964.yml |only tradestatistics-1.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_1964_kriptonite.yml |only tradestatistics-1.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_1964_yr_apple.yml |only tradestatistics-1.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_1964_yrpc_animal.yml |only tradestatistics-1.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_1964_yrpc_apple.yml |only tradestatistics-1.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_prk_1964.yml |only tradestatistics-1.0/tradestatistics/tests/testthat.R | 8 tradestatistics-1.0/tradestatistics/tests/testthat/helper-tradestatistics.R | 4 tradestatistics-1.0/tradestatistics/tests/testthat/test-ots_country_code.R | 80 tradestatistics-1.0/tradestatistics/tests/testthat/test-ots_create_tidy_data.R | 409 - tradestatistics-1.0/tradestatistics/tests/testthat/test-ots_inflation_adjustment.R | 106 tradestatistics-1.0/tradestatistics/tests/testthat/test-ots_product_code.R | 123 tradestatistics-1.0/tradestatistics/tests/testthat/test-ots_strings_processing.R |only tradestatistics-1.0/tradestatistics/vignettes/basic-usage.Rmd | 472 - 72 files changed, 5601 insertions(+), 2736 deletions(-)
More information about tradestatistics at CRAN
Permanent link
Title: Dynamic Model Averaging and Dynamic Model Selection for
Continuous Outcomes
Description: Allows to estimate dynamic model averaging, dynamic model selection and median probability model. The original methods are implemented, as well as, selected further modifications of these methods. In particular the user might choose between recursive moment estimation and exponentially moving average for variance updating. Inclusion probabilities might be modified in a way using 'Google Trends'. The code is written in a way which minimises the computational burden (which is quite an obstacle for dynamic model averaging if many variables are used). For example, this package allows for parallel computations and Occam's window approach. The package is designed in a way that is hoped to be especially useful in economics and finance. Main reference: Raftery, A.E., Karny, M., Ettler, P. (2010) <doi:10.1198/TECH.2009.08104>.
Author: Krzysztof Drachal [aut, cre] (Faculty of Economic Sciences, University
of Warsaw, Poland)
Maintainer: Krzysztof Drachal <kdrachal@wne.uw.edu.pl>
Diff between fDMA versions 2.2.4 dated 2018-09-29 and 2.2.5 dated 2020-04-03
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ NEWS | 9 +++++++++ R/fDMA.R | 4 ++-- inst/include/fDMA.h | 22 +++++++++++----------- man/crudeoil.Rd | 2 +- src/tvpcpp.cpp | 15 +++++---------- 7 files changed, 38 insertions(+), 34 deletions(-)
Title: Manipulating External Pointer
Description: There is limited native support for external pointers in the R interface.
This package provides some basic tools to verify, create and modify 'externalptr' objects.
Author: Randy Lai [aut, cre]
Maintainer: Randy Lai <randy.cs.lai@gmail.com>
Diff between xptr versions 1.1.2 dated 2019-12-09 and 1.1.3 dated 2020-04-03
xptr-1.1.2/xptr/man/is_xpt.Rd |only xptr-1.1.2/xptr/man/register_xtr_finalizer.Rd |only xptr-1.1.3/xptr/DESCRIPTION | 11 ++++++----- xptr-1.1.3/xptr/MD5 | 14 +++++++------- xptr-1.1.3/xptr/NAMESPACE | 4 ++-- xptr-1.1.3/xptr/R/xptr.R | 8 ++++---- xptr-1.1.3/xptr/man/is_xptr.Rd |only xptr-1.1.3/xptr/man/register_xptr_finalizer.Rd |only xptr-1.1.3/xptr/man/xptr.Rd | 3 +-- xptr-1.1.3/xptr/src/xptr.c | 4 ++-- 10 files changed, 22 insertions(+), 22 deletions(-)
Title: Conducts Mokken Scale Analysis
Description: Contains functions for performing Mokken
scale analysis on test and questionnaire data (e.g., Sijtsma and Van der Ark, 2017, <doi:10.1111/bmsp.12078>).
It includes an automated item selection algorithm, and various checks of model assumptions.
Author: L. Andries van der Ark [aut, cre],
Letty Koopman [aut],
J. Hendrik Straat [ctb],
Don van den Bergh [ctb]
Maintainer: L. Andries van der Ark <L.A.vanderArk@uva.nl>
Diff between mokken versions 2.8.11 dated 2018-06-03 and 3.0.0 dated 2020-04-03
mokken-2.8.11/mokken/src/Init.c |only mokken-2.8.11/mokken/src/mokken.c |only mokken-3.0.0/mokken/DESCRIPTION | 22 mokken-3.0.0/mokken/MD5 | 99 - mokken-3.0.0/mokken/NAMESPACE | 114 - mokken-3.0.0/mokken/R/ICC.R |only mokken-3.0.0/mokken/R/MLcoefH.R | 412 +++- mokken-3.0.0/mokken/R/MLweight.R | 32 mokken-3.0.0/mokken/R/RcppExports.R |only mokken-3.0.0/mokken/R/aisp.R | 141 + mokken-3.0.0/mokken/R/check.iio.R | 85 mokken-3.0.0/mokken/R/check.monotonicity.R | 2 mokken-3.0.0/mokken/R/check.norms.R | 8 mokken-3.0.0/mokken/R/check.reliability.R | 47 mokken-3.0.0/mokken/R/coefH.R | 1339 ++++++++++---- mokken-3.0.0/mokken/R/coefZ.R | 38 mokken-3.0.0/mokken/R/internalFunctions.R | 122 + mokken-3.0.0/mokken/R/search.extended.R | 3 mokken-3.0.0/mokken/R/search.ga.R | 64 mokken-3.0.0/mokken/R/search.normal.R | 303 +++ mokken-3.0.0/mokken/R/summary.monotonicity.class.R | 1 mokken-3.0.0/mokken/data/SWMD.RData |only mokken-3.0.0/mokken/inst/doc/GettingStartedWithMokken.pdf |binary mokken-3.0.0/mokken/man/ICC.Rd |only mokken-3.0.0/mokken/man/MLcoefH.Rd | 31 mokken-3.0.0/mokken/man/MLweight.Rd | 17 mokken-3.0.0/mokken/man/SWMD.Rd |only mokken-3.0.0/mokken/man/aisp.Rd | 71 mokken-3.0.0/mokken/man/autonomySupport.Rd | 7 mokken-3.0.0/mokken/man/cavalini.Rd | 2 mokken-3.0.0/mokken/man/check.bounds.Rd | 2 mokken-3.0.0/mokken/man/check.ca.Rd | 2 mokken-3.0.0/mokken/man/check.errors.Rd | 2 mokken-3.0.0/mokken/man/check.iio.Rd | 6 mokken-3.0.0/mokken/man/check.monotonicity.Rd | 3 mokken-3.0.0/mokken/man/check.norms.Rd | 2 mokken-3.0.0/mokken/man/check.pmatrix.Rd | 2 mokken-3.0.0/mokken/man/check.reliability.Rd | 2 mokken-3.0.0/mokken/man/check.restscore.Rd | 2 mokken-3.0.0/mokken/man/coefH.Rd | 39 mokken-3.0.0/mokken/man/coefZ.Rd | 40 mokken-3.0.0/mokken/man/mokken-package.Rd | 65 mokken-3.0.0/mokken/man/plot.iio.class.Rd | 8 mokken-3.0.0/mokken/man/plot.monotonicity.class.Rd | 4 mokken-3.0.0/mokken/man/plot.pmatrix.class.Rd | 3 mokken-3.0.0/mokken/man/plot.restscore.class.Rd | 3 mokken-3.0.0/mokken/man/recode.Rd | 2 mokken-3.0.0/mokken/man/summary.iio.class.Rd | 6 mokken-3.0.0/mokken/man/summary.monotonicity.cass.Rd | 4 mokken-3.0.0/mokken/man/summary.pmatrix.class.Rd | 4 mokken-3.0.0/mokken/man/summary.restscore.class.Rd | 3 mokken-3.0.0/mokken/man/twoway.Rd | 2 mokken-3.0.0/mokken/src/Makevars |only mokken-3.0.0/mokken/src/Makevars.win |only mokken-3.0.0/mokken/src/RcppExports.cpp |only mokken-3.0.0/mokken/src/geneticAlgorithm.cpp |only 56 files changed, 2441 insertions(+), 725 deletions(-)
Title: Generalized Dissimilarity Modeling
Description: A toolkit with functions to fit, plot, summarize, and apply Generalized Dissimilarity Models.
Author: Matthew C. Fitzpatrick, Karel Mokany, Glenn Manion, Matthew Lisk, Simon Ferrier, Diego Nieto-Lugilde
Maintainer: Matthew C. Fitzpatrick <mfitzpatrick@umces.edu>
Diff between gdm versions 1.4 dated 2020-02-05 and 1.4.1 dated 2020-04-03
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- build/vignette.rds |binary data/gdm.RData |binary inst/doc/gdmVignette.pdf |binary 5 files changed, 7 insertions(+), 7 deletions(-)
More information about EventDetectGUI at CRAN
Permanent link
Title: Load US Census Boundary and Attribute Data as 'tidyverse' and
'sf'-Ready Data Frames
Description: An integrated R interface to the decennial US Census and American Community Survey APIs and
the US Census Bureau's geographic boundary files. Allows R users to return Census and ACS data as
tidyverse-ready data frames, and optionally returns a list-column with feature geometry for many
geographies.
Author: Kyle Walker [aut, cre],
Kris Eberwein [ctb],
Matt Herman [ctb]
Maintainer: Kyle Walker <kyle.walker@tcu.edu>
Diff between tidycensus versions 0.9.6 dated 2020-01-25 and 0.9.9.2 dated 2020-04-03
DESCRIPTION | 8 +- MD5 | 20 +++--- R/acs.R | 29 ++++++++++ R/census.R | 6 -- R/fips_codes.R | 12 ++++ R/helpers.R | 147 ++++++++++++++++++++++++++++++++++++++++++++++++++- R/load_data.R | 24 +------- R/moe.R | 7 +- R/search_variables.R | 8 +- README.md | 8 ++ man/fips_codes.Rd | 10 +++ 11 files changed, 230 insertions(+), 49 deletions(-)
Title: Within Outlying Mean Indexes: Refining the OMI Analysis
Description: Complementary indexes calculation to the Outlying Mean Index analysis to explore niche shift of a community and biological constraint within an Euclidean space, with graphical displays.
Author: Stephane Karasiewicz
Maintainer: Stephane Karasiewicz <skaraz.science@gmail.com>
Diff between subniche versions 1.1 dated 2020-03-28 and 1.2 dated 2020-04-03
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ R/plot_dym_sp.R | 23 +++++++++++++++-------- R/subarea.R | 2 +- R/subplot.R | 5 +++++ R/subplot_sp.R | 34 +++++++--------------------------- man/plot_dym_sp.Rd | 6 ++++++ 7 files changed, 44 insertions(+), 46 deletions(-)
Title: Miscellaneous Functions
Description: Various functions for random number generation, density
estimation, classification, curve fitting, and spatial
data analysis.
Author: Dai Feng
Maintainer: Dai Feng <daifeng.stat@gmail.com>
Diff between miscF versions 0.1-4 dated 2018-02-16 and 0.1-5 dated 2020-04-03
ChangeLog | 3 +++ DESCRIPTION | 8 ++++---- MD5 | 4 ++-- 3 files changed, 9 insertions(+), 6 deletions(-)
Title: Multiple Imputation by Chained Equations with Random Forests
Description: Multiple Imputation has been shown to
be a flexible method to impute missing values by
Van Buuren (2007) <doi:10.1177/0962280206074463>.
Expanding on this, random forests have been shown
to be an accurate model by Stekhoven and Buhlmann
<arXiv:1105.0828> to impute missing values in datasets.
They have the added benefits of returning out of bag
error and variable importance estimates, as well as
being simple to run in parallel.
Author: Sam Wilson [aut, cre]
Maintainer: Sam Wilson <samwilson303@gmail.com>
Diff between miceRanger versions 1.3.4 dated 2020-02-22 and 1.3.5 dated 2020-04-03
DESCRIPTION | 8 ++++---- MD5 | 22 +++++++++++----------- NAMESPACE | 2 +- NEWS.md | 4 ++++ R/impute.R | 2 +- R/miceRanger.R | 6 +++--- R/print.R | 4 ++-- inst/doc/diagnosticPlotting.html | 8 ++++---- inst/doc/miceAlgorithm.html | 4 ++-- inst/doc/usingMiceRanger.html | 12 ++++++------ man/miceRanger.Rd | 4 ++-- man/sampleMiceDefs.Rd | 4 +++- 12 files changed, 43 insertions(+), 37 deletions(-)
Title: Adjusted Relative Risk from Logistic Regression
Description: Adjusted odds ratio conditional on potential confounders can be directly obtained from logistic regression. However, those adjusted odds ratios have been widely incorrectly interpreted as a relative risk. As relative risk is often of interest in public health, we provide a simple code to return adjusted relative risks from logistic regression model under potential confounders.
Author: Youjin Lee
Maintainer: Youjin Lee <youjin.lee@pennmedicine.upenn.edu>
Diff between logisticRR versions 0.2.0 dated 2018-10-31 and 0.3.0 dated 2020-04-03
DESCRIPTION | 12 - MD5 | 30 ++-- R/logisticRR.R | 2 R/multiRR.R | 2 R/multinRR.R | 2 R/nominalRR.R | 2 README.md | 6 build/vignette.rds |binary inst/doc/logisticRR.R | 175 ------------------------- inst/doc/logisticRR.Rmd | 28 ++-- inst/doc/logisticRR.html | 329 +++++++++++++++++++++-------------------------- man/logisticRR.Rd | 10 + man/multiRR.Rd | 3 man/multinRR.Rd | 11 + man/nominalRR.Rd | 11 + vignettes/logisticRR.Rmd | 28 ++-- 16 files changed, 236 insertions(+), 415 deletions(-)
Title: Freshing Up your 'ggplot2' Plots
Description: Functions for working with legends and axis lines of 'ggplot2',
facets that repeat axis lines on all panels, and some 'knitr' extensions.
Author: Stefan McKinnon Edwards [aut, ctb, cre]
(<https://orcid.org/0000-0002-4628-8148>),
Baptiste Auguie [ctb] (For g_legend and grid_arrange_shared_legend),
Shaun Jackman [ctb] (For grid_arrange_shared_legend),
Hadley Wickham [ctb] (ggplot2 functions),
Winston Chang [ctb] (ggplot2 functions)
Maintainer: Stefan McKinnon Edwards <sme@iysik.com>
Diff between lemon versions 0.4.3 dated 2019-01-08 and 0.4.4 dated 2020-04-03
lemon-0.4.3/lemon/R/guides-axis.r |only lemon-0.4.4/lemon/DESCRIPTION | 19 lemon-0.4.4/lemon/MD5 | 124 +- lemon-0.4.4/lemon/NAMESPACE | 2 lemon-0.4.4/lemon/R/axis-annotation.r | 144 ++ lemon-0.4.4/lemon/R/brackets.R | 29 lemon-0.4.4/lemon/R/coord-capped.r | 86 + lemon-0.4.4/lemon/R/coord-cartesian.r |only lemon-0.4.4/lemon/R/coord-flex.r | 43 lemon-0.4.4/lemon/R/dot.r | 2 lemon-0.4.4/lemon/R/facet-rep-lab.r | 6 lemon-0.4.4/lemon/R/facet-wrap.r | 9 lemon-0.4.4/lemon/R/geom-pointline.r | 77 + lemon-0.4.4/lemon/R/geom-siderange.r | 6 lemon-0.4.4/lemon/R/ggplot2.r | 25 lemon-0.4.4/lemon/R/grob_utils.r | 8 lemon-0.4.4/lemon/R/gtable_show-.r | 7 lemon-0.4.4/lemon/R/legends.r | 5 lemon-0.4.4/lemon/R/lemon-plot.r | 14 lemon-0.4.4/lemon/R/lemon_print.r | 254 ++-- lemon-0.4.4/lemon/R/scale-expansion.r |only lemon-0.4.4/lemon/R/scale-symmetric.r | 4 lemon-0.4.4/lemon/R/scale-view.r |only lemon-0.4.4/lemon/build/vignette.rds |binary lemon-0.4.4/lemon/inst/doc/capped-axes.R | 20 lemon-0.4.4/lemon/inst/doc/capped-axes.Rmd | 99 + lemon-0.4.4/lemon/inst/doc/capped-axes.html | 889 ++++++++-------- lemon-0.4.4/lemon/inst/doc/facet-rep-labels.R | 4 lemon-0.4.4/lemon/inst/doc/facet-rep-labels.html | 577 ++++++---- lemon-0.4.4/lemon/inst/doc/geoms.R | 4 lemon-0.4.4/lemon/inst/doc/geoms.html | 482 +++++--- lemon-0.4.4/lemon/inst/doc/gtable_show_lemonade.R | 30 lemon-0.4.4/lemon/inst/doc/gtable_show_lemonade.Rmd | 10 lemon-0.4.4/lemon/inst/doc/gtable_show_lemonade.html | 793 ++++++++------ lemon-0.4.4/lemon/inst/doc/legends.R | 26 lemon-0.4.4/lemon/inst/doc/legends.html | 1028 +++++++++---------- lemon-0.4.4/lemon/inst/doc/lemon_print.R | 16 lemon-0.4.4/lemon/inst/doc/lemon_print.html | 931 ++++++++--------- lemon-0.4.4/lemon/inst/examples/axis-annotation-ex.r | 7 lemon-0.4.4/lemon/man/annotate_axis.Rd | 169 +-- lemon-0.4.4/lemon/man/brackets.Rd | 120 +- lemon-0.4.4/lemon/man/coord_capped.Rd | 178 +-- lemon-0.4.4/lemon/man/coord_flex.Rd | 206 ++- lemon-0.4.4/lemon/man/dot.Rd | 107 - lemon-0.4.4/lemon/man/element_render.Rd | 68 - lemon-0.4.4/lemon/man/facet_rep.Rd | 68 - lemon-0.4.4/lemon/man/g_legend.Rd | 146 +- lemon-0.4.4/lemon/man/geom_pointpath.Rd | 361 +++--- lemon-0.4.4/lemon/man/geom_siderange.Rd | 248 ++-- lemon-0.4.4/lemon/man/get_panel_range.Rd | 48 lemon-0.4.4/lemon/man/ggplot2-non-exports.Rd | 61 - lemon-0.4.4/lemon/man/grid_arrange_shared_legend.Rd | 139 +- lemon-0.4.4/lemon/man/gtable_show.Rd | 105 - lemon-0.4.4/lemon/man/guidebox_as_column.Rd | 76 - lemon-0.4.4/lemon/man/is.small.Rd | 60 - lemon-0.4.4/lemon/man/lemon-ggproto.Rd | 78 - lemon-0.4.4/lemon/man/lemon.Rd | 144 +- lemon-0.4.4/lemon/man/lemon_plot.Rd | 44 lemon-0.4.4/lemon/man/lemon_print.Rd | 174 +-- lemon-0.4.4/lemon/man/remove_labels_from_axis.Rd | 30 lemon-0.4.4/lemon/man/reposition_legend.Rd | 216 ++- lemon-0.4.4/lemon/man/scale_symmetric.Rd | 72 - lemon-0.4.4/lemon/tests/testthat/test_lemon_plot.r | 2 lemon-0.4.4/lemon/vignettes/capped-axes.Rmd | 99 + lemon-0.4.4/lemon/vignettes/gtable_show_lemonade.Rmd | 10 65 files changed, 4797 insertions(+), 4012 deletions(-)
Title: Dynamic Simulation and Testing for Single-Equation ARDL Models
Description: While autoregressive distributed lag (ARDL) models allow for extremely flexible dynamics, interpreting substantive significance of complex lag structures remains difficult. This package is designed to assist users in dynamically simulating and plotting the results of various ARDL models. It also contains post-estimation diagnostics, including a test for cointegration when estimating the error-correction variant of the autoregressive distributed lag model (Pesaran, Shin, and Smith 2001 <doi:10.1002/jae.616>).
Author: Soren Jordan [aut, cre, cph],
Andrew Q. Philips [aut]
Maintainer: Soren Jordan <sorenjordanpols@gmail.com>
Diff between dynamac versions 0.1.10 dated 2019-11-07 and 0.1.11 dated 2020-04-03
DESCRIPTION | 6 MD5 | 33 R/dynamac.R | 863 ++++++----- inst/doc/dynamac-vignette.R | 17 inst/doc/dynamac-vignette.Rmd | 48 inst/doc/dynamac-vignette.html | 2397 +++++++++++++++++-------------- inst/dynamac-manual.pdf |binary man/dynardl.Rd | 95 - man/dynardl.all.plots.Rd | 38 man/dynardl.simulation.plot.Rd | 41 man/pssbounds.Rd | 17 man/summary.dynardl.Rd | 3 man/supreme.sup.Rd | 5 tests/testthat/test-dynardl-all.R |only tests/testthat/test-dynardl-auto.R |only tests/testthat/test-dynardl-simulation.R |only tests/testthat/test-dynardl.R | 211 ++ tests/testthat/test-pssbounds.R |only tests/testthat/test-summary.R |only vignettes/dynamac-vignette.Rmd | 48 20 files changed, 2151 insertions(+), 1671 deletions(-)
Title: Tools for Creating Tuning Parameter Values
Description: Many models contain tuning parameters (i.e. parameters that cannot be directly estimated from the data). These tools can be used to define objects for creating, simulating, or validating values for such parameters.
Author: Max Kuhn [aut, cre],
RStudio [cph]
Maintainer: Max Kuhn <max@rstudio.com>
Diff between dials versions 0.0.5 dated 2020-04-01 and 0.0.6 dated 2020-04-03
DESCRIPTION | 6 ++-- MD5 | 10 +++--- NEWS.md | 4 ++ R/constructors.R | 7 ++-- R/misc.R | 35 ++++++++++++++++++----- tests/testthat/test_construction.R | 54 +++++++++++++++++++++++++++++++++++++ 6 files changed, 97 insertions(+), 19 deletions(-)
Title: MR Spectroscopy Analysis Tools
Description: Tools for reading, visualising and processing Magnetic Resonance
Spectroscopy data. <https://martin3141.github.io/spant/>.
Author: Martin Wilson [cre, aut],
John Muschelli [ctb]
Maintainer: Martin Wilson <martin@pipegrep.co.uk>
Diff between spant versions 1.2.1 dated 2020-03-15 and 1.3.0 dated 2020-04-03
DESCRIPTION | 10 +++--- MD5 | 29 +++++++++--------- NAMESPACE | 3 + NEWS.md | 8 +++++ R/fit_display.R | 25 ++++++++++++--- R/fitting.R | 33 ++++++++++++++++++++ R/interactive_plotting.R | 39 ++++++++++++++++-------- R/mrs_data_proc.R | 44 ++++++++++++++++++++------- build/vignette.rds |binary inst/doc/spant-intro.html | 60 +++++++++++++++++++------------------- inst/doc/spant-preprocessing.html | 4 +- man/get_fit_table.Rd |only man/plot_slice_fit.Rd | 15 ++++++++- man/plot_slice_fit_inter.Rd | 7 +++- man/ppm.Rd | 26 +++++++++++----- man/spant_mpress_drift.Rd | 4 +- 16 files changed, 213 insertions(+), 94 deletions(-)
Title: Working with Rotation Data
Description: Tools for working with rotational data, including
simulation from the most commonly used distributions on SO(3),
methods for different Bayes, mean and median type estimators for
the central orientation of a sample, confidence/credible
regions for the central orientation based on those estimators and
a novel visualization technique for rotation data. Most recently,
functions to identify potentially discordant (outlying) values
have been added. References: Bingham, Melissa A. and Nordman, Dan J. and Vardeman, Steve B. (2009) <doi:10.1198/jasa.2009.ap08741>,
Bingham, Melissa A and Vardeman, Stephen B and Nordman, Daniel J (2009) <doi:10.1214/09-BA423>,
Bingham, Melissa A and Nordman, Daniel J and Vardeman, Stephen B (2010) <doi:10.1016/j.csda.2009.11.020>,
Leon, C.A. and Masse, J.C. and Rivest, L.P. (2006) <doi:10.1016/j.jmva.2005.03.009>,
Hartley, R and Aftab, K and Trumpf, J. (2011) <doi:10.1109/CVPR.2011.5995745>,
Stanfill, Bryan and Genschel, Ulrike and Hofmann, Heike (2013) <doi:10.1080/00401706.2013.826145>,
Maonton, Jonathan (2004) <doi:10.1109/ICARCV.2004.1469774>,
Mardia, KV and Jupp, PE (2000, ISBN:9780471953333),
Rancourt, D. and Rivest, L.P. and Asselin, J. (2000) <doi:10.1111/1467-9876.00180>,
Chang, Ted and Rivest, Louis-Paul (2001) <doi:10.1214/aos/1009210690>,
Fisher, Nicholas I. (1996, ISBN:0521568900).
Author: Bryan Stanfill [aut, cre],
Heike Hofmann [aut],
Ulrike Genschel [aut],
Aymeric Stamm [ctb] (<https://orcid.org/0000-0002-8725-3654>),
Luciano Selzer [ctb]
Maintainer: Bryan Stanfill <bstanfill2003@gmail.com>
Diff between rotations versions 1.6 dated 2020-03-28 and 1.6.1 dated 2020-04-03
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- NEWS | 8 ++++++++ README.md | 6 +++--- inst/doc/rotations-intro.pdf |binary src/basics.cpp | 2 +- 6 files changed, 20 insertions(+), 12 deletions(-)
Title: 'Rcpp' Bindings for the 'simdjson' Header-Only Library for
'JSON' Parsing
Description: The 'JSON' format is ubiquitous for data interchange, and the
'simdjson' library written by Daniel Lemire (and many contributors) provides
a high-performance parser for these files which by relying on parallel 'SIMD'
instruction manages to parse these files as faster than disk speed. See the
<arXiv:1902.08318> paper for more details about 'simdjson'. This package is
at present only a very thin and incomplete wrapper and does not aim to replace
the existing and excellent 'JSON' packages for R. But it does already validate
orders of magnitude faster.
Author: Dirk Eddelbuettel
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppSimdJson versions 0.0.3 dated 2020-03-03 and 0.0.4 dated 2020-04-03
ChangeLog | 17 DESCRIPTION | 8 MD5 | 18 README.md | 1 build/partial.rdb |binary configure | 3 inst/NEWS.Rd | 8 inst/include/simdjson.cpp | 9980 ++++++++++++++++++++++++++++++---------------- inst/include/simdjson.h | 5629 +++++++++++++++++-------- src/simdjson_example.cpp | 8 10 files changed, 10489 insertions(+), 5183 deletions(-)
Title: Request <https://openblender.io> API Services
Description: Interface to make HTTP requests to 'OpenBlender' API services. Go to <https://openblender.io> for more information.
Author: Open Blender Inc. [cph],
Daniel V. Pinacho [aut, cre]
Maintainer: Daniel V. Pinacho <danielvpinacho@gmail.com>
Diff between openblender versions 0.5.7 dated 2020-03-28 and 0.5.71 dated 2020-04-03
DESCRIPTION | 6 +++--- MD5 | 6 +++--- R/utils.R | 6 +----- tests/testthat.R | 1 - 4 files changed, 7 insertions(+), 12 deletions(-)
Title: A Forward Agent-Based Transmission Chain Simulator
Description: The aim of 'nosoi' (pronounced no.si) is to provide a flexible agent-based stochastic transmission chain/epidemic simulator (Lequime et al. bioRxiv 2020.03.03.973107). It is named after the daimones of plague, sickness and disease that escaped Pandora's jar in the Greek mythology. 'nosoi' is able to take into account the influence of multiple variable on the transmission process (e.g. dual-host systems (such as arboviruses), within-host viral dynamics, transportation, population structure), alone or taken together, to create complex but relatively intuitive epidemiological simulations.
Author: Sebastian Lequime [aut, cre] (<https://orcid.org/0000-0002-3140-0651>),
Paul Bastide [aut] (<https://orcid.org/0000-0002-8084-9893>),
Simon Dellicour [aut] (<https://orcid.org/0000-0001-9558-1052>),
Philippe Lemey [aut] (<https://orcid.org/0000-0003-2826-5353>),
Guy Baele [aut] (<https://orcid.org/0000-0002-1915-7732>)
Maintainer: Sebastian Lequime <sebastian.lequime@gmail.com>
Diff between nosoi versions 1.0.1 dated 2020-02-19 and 1.0.2 dated 2020-04-03
DESCRIPTION | 14 +++++++------- MD5 | 16 ++++++++-------- R/output_treeGenerator.r | 8 ++++---- inst/WORDLIST | 1 + inst/doc/continuous.html | 4 ++-- inst/doc/discrete.html | 4 ++-- inst/doc/none.html | 4 ++-- inst/doc/nosoi.html | 4 ++-- inst/doc/output.html | 4 ++-- 9 files changed, 30 insertions(+), 29 deletions(-)
Title: Read Data from JSTOR/DfR
Description: Functions and helpers to import metadata, ngrams and full-texts
delivered by Data for Research by JSTOR.
Author: Thomas Klebel [aut, cre] (<https://orcid.org/0000-0002-7331-4751>)
Maintainer: Thomas Klebel <t.klebel@hotmail.com>
Diff between jstor versions 0.3.7 dated 2019-09-04 and 0.3.8 dated 2020-04-03
DESCRIPTION | 13 ++++---- MD5 | 48 +++++++++++++++++---------------- NEWS.md | 8 ++++- R/journal_info.R | 10 +++--- R/sysdata.rda |binary build/vignette.rds |binary inst/doc/Introduction.R | 40 +++++++++++++-------------- inst/doc/Introduction.html | 41 ++++++++++++++-------------- inst/doc/automating-file-import.R | 34 +++++++++++------------ inst/doc/automating-file-import.Rmd | 4 +- inst/doc/automating-file-import.html | 33 +++++++++++----------- inst/doc/known-quirks.R | 12 ++++---- inst/doc/known-quirks.html | 27 +++++++++++------- man/jst_combine_outputs.Rd | 12 ++++++-- man/jst_get_journal_overview.Rd | 2 - man/jst_get_references.Rd | 2 - man/jst_get_total_pages.Rd | 4 +- man/jst_import.Rd | 30 +++++++++++++++----- man/jst_re_import.Rd | 2 - man/jstor.Rd | 1 tests/testthat/test-books.R | 4 +- tests/testthat/test-journal-overview.R | 5 ++- tests/testthat/test-writing-to-file.R | 2 - vignettes/analysing-n-grams.Rmd.orig |only vignettes/automating-file-import.Rmd | 4 +- vignettes/precompile.R |only 26 files changed, 187 insertions(+), 151 deletions(-)
Title: Analyzing High-Throughput Single Cell Sequencing Data
Description: A toolkit that allows scientists to work with data from single cell sequencing technologies such as scRNA-seq, scVDJ-seq and CITE-Seq. Single (i) Cell R package ('iCellR') provides unprecedented flexibility at every step of the analysis pipeline, including normalization, clustering, dimensionality reduction, imputation, visualization, and so on. Users can design both unsupervised and supervised models to best suit their research. In addition, the toolkit provides 2D and 3D interactive visualizations, differential expression analysis, filters based on cells, genes and clusters, data merging, normalizing for dropouts, data imputation methods, correcting for batch differences, pathway analysis, tools to find marker genes for clusters and conditions, predict cell types and pseudotime analysis. See Khodadadi-Jamayran, et al (2020) <doi:10.1101/2020.03.31.019109> for more details.
Author: Alireza Khodadadi-Jamayran [aut, cre]
(<https://orcid.org/0000-0003-2495-7504>),
Joseph Pucella [aut, ctb] (<https://orcid.org/0000-0003-0875-8046>),
Hua Zhou [aut, ctb],
Nicole Doudican [aut, ctb] (<https://orcid.org/0000-0003-3827-9644>),
John Carucci [aut, ctb] (<https://orcid.org/0000-0001-6817-9439>),
Adriana Heguy [aut, ctb],
Boris Reizis [aut, ctb] (<https://orcid.org/0000-0003-1140-7853>),
Aristotelis Tsirigos [aut, ctb]
(<https://orcid.org/0000-0002-7512-8477>)
Maintainer: Alireza Khodadadi-Jamayran <alireza.khodadadi.j@gmail.com>
Diff between iCellR versions 1.3.3 dated 2020-03-14 and 1.4.0 dated 2020-04-03
DESCRIPTION | 33 +++++++++++++++++---------------- MD5 | 25 ++++++++++++++----------- NAMESPACE | 1 + R/F005.stats.plot.R | 10 +++++----- R/F012.run.pca.R | 2 +- R/F020.cluster.plot.R | 21 +++++++++++++++++++++ R/F027.clust.stats.plot.R | 8 ++++---- R/F031.gene.plot.R | 19 +++++++++++-------- R/globalVariables.R | 3 ++- R/iba.R |only R/run.mnn.R | 10 ++++++++-- inst/CITATION |only man/cluster.plot.Rd | 6 ++++++ man/iba.Rd |only man/run.pca.Rd | 2 +- 15 files changed, 91 insertions(+), 49 deletions(-)
Title: Interpreted String Literals
Description: An implementation of interpreted string literals, inspired by
Python's Literal String Interpolation <https://www.python.org/dev/peps/pep-0498/> and Docstrings
<https://www.python.org/dev/peps/pep-0257/> and Julia's Triple-Quoted String Literals
<https://docs.julialang.org/en/v1.3/manual/strings/#Triple-Quoted-String-Literals-1>.
Author: Jim Hester [aut, cre]
Maintainer: Jim Hester <james.f.hester@gmail.com>
Diff between glue versions 1.3.2 dated 2020-03-12 and 1.4.0 dated 2020-04-03
DESCRIPTION | 6 +++--- MD5 | 29 ++++++++++++++++------------- NAMESPACE | 2 ++ NEWS.md | 11 +++++++++++ R/glue.R | 6 +++++- R/safe.R |only README.md | 3 +-- inst/doc/speed.Rmd | 10 +++++----- inst/doc/speed.html | 8 ++++---- man/glue.Rd | 2 +- man/glue_col.Rd | 2 +- man/glue_safe.Rd |only man/glue_sql.Rd | 2 +- src/glue.c | 1 + src/trim.c | 10 ++-------- tests/testthat/test-safe.R |only vignettes/speed.Rmd | 10 +++++----- 17 files changed, 58 insertions(+), 44 deletions(-)
Title: Produce Forest Plots to Visualize Covariate Effects
Description: Produce forest plots to visualize covariate effects using either
the command line or an interactive 'Shiny' application.
Author: Samer Mouksassi [aut, cre] (<https://orcid.org/0000-0002-7152-6654>),
Dean Attali [ctb]
Maintainer: Samer Mouksassi <samermouksassi@gmail.com>
Diff between coveffectsplot versions 0.0.5 dated 2020-02-06 and 0.0.9 dated 2020-04-03
coveffectsplot-0.0.5/coveffectsplot/inst/doc/PKPD_Example.R |only coveffectsplot-0.0.5/coveffectsplot/inst/doc/PKPD_Example.Rmd |only coveffectsplot-0.0.5/coveffectsplot/inst/doc/PKPD_Example.html |only coveffectsplot-0.0.5/coveffectsplot/inst/doc/PK_Example.R |only coveffectsplot-0.0.5/coveffectsplot/inst/doc/PK_Example.Rmd |only coveffectsplot-0.0.5/coveffectsplot/inst/doc/PK_Example.html |only coveffectsplot-0.0.5/coveffectsplot/inst/doc/introduction_to_coveffectsplot.R |only coveffectsplot-0.0.5/coveffectsplot/inst/doc/introduction_to_coveffectsplot.Rmd |only coveffectsplot-0.0.5/coveffectsplot/inst/doc/introduction_to_coveffectsplot.html |only coveffectsplot-0.0.5/coveffectsplot/vignettes/PKPD_Example.Rmd |only coveffectsplot-0.0.5/coveffectsplot/vignettes/PK_Example.Rmd |only coveffectsplot-0.0.5/coveffectsplot/vignettes/introduction_to_coveffectsplot.Rmd |only coveffectsplot-0.0.9/coveffectsplot/DESCRIPTION | 17 coveffectsplot-0.0.9/coveffectsplot/MD5 | 58 - coveffectsplot-0.0.9/coveffectsplot/NAMESPACE | 2 coveffectsplot-0.0.9/coveffectsplot/NEWS.md | 23 coveffectsplot-0.0.9/coveffectsplot/R/forest_plot.R | 85 + coveffectsplot-0.0.9/coveffectsplot/README.md | 13 coveffectsplot-0.0.9/coveffectsplot/build/vignette.rds |binary coveffectsplot-0.0.9/coveffectsplot/inst/doc/Exposure_Response_Example.R | 291 ++++- coveffectsplot-0.0.9/coveffectsplot/inst/doc/Exposure_Response_Example.Rmd | 317 ++++-- coveffectsplot-0.0.9/coveffectsplot/inst/doc/Exposure_Response_Example.html | 518 ++++++---- coveffectsplot-0.0.9/coveffectsplot/inst/doc/Introduction_to_coveffectsplot.R |only coveffectsplot-0.0.9/coveffectsplot/inst/doc/Introduction_to_coveffectsplot.Rmd |only coveffectsplot-0.0.9/coveffectsplot/inst/doc/Introduction_to_coveffectsplot.html |only coveffectsplot-0.0.9/coveffectsplot/inst/doc/Pediatric_Cov_Sim.R |only coveffectsplot-0.0.9/coveffectsplot/inst/doc/Pediatric_Cov_Sim.Rmd |only coveffectsplot-0.0.9/coveffectsplot/inst/doc/Pediatric_Cov_Sim.html |only coveffectsplot-0.0.9/coveffectsplot/inst/shiny/global.r | 58 - coveffectsplot-0.0.9/coveffectsplot/inst/shiny/rsconnect/shinyapps.io/pharmacometrics/coveffectsplot.dcf | 6 coveffectsplot-0.0.9/coveffectsplot/inst/shiny/server.R | 150 +- coveffectsplot-0.0.9/coveffectsplot/inst/shiny/text/howto.md | 8 coveffectsplot-0.0.9/coveffectsplot/inst/shiny/ui.R | 135 +- coveffectsplot-0.0.9/coveffectsplot/man/forest_plot.Rd | 31 coveffectsplot-0.0.9/coveffectsplot/man/get_sample_data.Rd | 26 coveffectsplot-0.0.9/coveffectsplot/man/prezista.Rd | 6 coveffectsplot-0.0.9/coveffectsplot/man/run_interactiveforestplot.Rd | 36 coveffectsplot-0.0.9/coveffectsplot/vignettes/Exposure_Response_Example.Rmd | 317 ++++-- coveffectsplot-0.0.9/coveffectsplot/vignettes/Introduction_to_coveffectsplot.Rmd |only coveffectsplot-0.0.9/coveffectsplot/vignettes/Pediatric_Cov_Sim.Rmd |only 40 files changed, 1490 insertions(+), 607 deletions(-)
More information about coveffectsplot at CRAN
Permanent link
Title: Various Methods for Measuring Agreement
Description: Bland-Altman plot and scatter plot with identity line
for visualization and point and
interval estimates for different metrics related to
reproducibility/repeatability/agreement including
the concordance correlation coefficient,
intraclass correlation coefficient,
within-subject coefficient of variation,
smallest detectable difference,
and mean normalized smallest detectable difference.
Author: Dai Feng
Maintainer: Dai Feng <daifeng.stat@gmail.com>
Diff between agRee versions 0.5-2 dated 2018-07-08 and 0.5-3 dated 2020-04-03
ChangeLog | 3 +++ DESCRIPTION | 9 +++++---- MD5 | 7 +++++-- data/judgeRatings.R |only data/lesionBurden.R |only data/petVT.R |only 6 files changed, 13 insertions(+), 6 deletions(-)
Title: Data and Variable Transformation Functions
Description: Collection of miscellaneous utility functions, supporting data
transformation tasks like recoding, dichotomizing or grouping variables,
setting and replacing missing values. The data transformation functions
also support labelled data, and all integrate seamlessly into a
'tidyverse'-workflow.
Author: Daniel Lüdecke [aut, cre] (<https://orcid.org/0000-0002-8895-3206>),
Iago Giné-Vázquez [ctb],
Alexander Bartel [ctb] (<https://orcid.org/0000-0002-1280-6138>)
Maintainer: Daniel Lüdecke <d.luedecke@uke.de>
Diff between sjmisc versions 2.8.3 dated 2020-01-10 and 2.8.4 dated 2020-04-03
DESCRIPTION | 8 MD5 | 76 +- NAMESPACE | 5 NEWS.md | 8 R/S3-methods.R | 13 R/count_na.R | 54 +- R/descr.R | 40 - R/dicho.R | 2 R/frq.R | 18 R/merge_imputations.R | 18 R/rec.R | 19 R/replace_na.R | 44 - R/spread_coef.R | 100 +-- R/to_long.R | 3 build/partial.rdb |binary build/vignette.rds |binary inst/doc/design_philosophy.html | 422 ++++++++-------- inst/doc/exploringdatasets.html | 310 ++++++------ inst/doc/recodingvariables.html | 823 ++++++++++++++++---------------- man/count_na.Rd | 54 +- man/descr.Rd | 2 man/efc.Rd | 38 - man/find_var.Rd | 6 man/frq.Rd | 2 man/merge_imputations.Rd | 18 man/rec.Rd | 19 man/reexports.Rd | 36 - man/replace_na.Rd | 44 - man/spread_coef.Rd | 100 +-- tests/testthat/test-add_case.R | 70 +- tests/testthat/test-allna.R | 28 - tests/testthat/test-colcnt.R | 35 - tests/testthat/test-countna.R | 63 +- tests/testthat/test-demean.R | 24 tests/testthat/test-frq.R | 120 +++- tests/testthat/test-merge_imputations.R | 19 tests/testthat/test-replacena.R | 33 - tests/testthat/test-splitvar.R | 24 tests/testthat/test-std.R | 74 +- 39 files changed, 1446 insertions(+), 1326 deletions(-)
Title: eBird Data Extraction and Processing in R
Description: Extract and process bird sightings records from
eBird (<http://ebird.org>), an online tool for recording bird
observations. Public access to the full eBird database is via the
eBird Basic Dataset (EBD; see <http://ebird.org/ebird/data/download>
for access), a downloadable text file. This package is an interface to
AWK for extracting data from the EBD based on taxonomic, spatial, or
temporal filters, to produce a manageable file size that can be
imported into R.
Author: Matthew Strimas-Mackey [aut, cre]
(<https://orcid.org/0000-0001-8929-7776>),
Eliot Miller [aut],
Wesley Hochachka [aut],
Cornell Lab of Ornithology [cph]
Maintainer: Matthew Strimas-Mackey <mes335@cornell.edu>
Diff between auk versions 0.4.0 dated 2019-09-23 and 0.4.1 dated 2020-04-03
DESCRIPTION | 11 MD5 | 132 +++--- NEWS.md | 10 R/auk-bbox.r | 22 - R/auk-filter.r | 4 R/auk-rollup.r | 4 R/auk-select.r | 9 R/auk-split.r | 39 + R/auk-version.r | 4 R/data.r | 2 R/filter-repeat-visits.r | 49 +- R/get-ebird-taxonomy.r | 2 R/read.r | 6 build/vignette.rds |binary data/ebird_taxonomy.rda |binary inst/doc/auk.R | 40 - inst/doc/auk.Rmd | 6 inst/doc/auk.html | 790 +++++++++++++++++------------------- inst/doc/development.R | 6 inst/doc/development.Rmd | 4 inst/doc/development.html | 99 ++-- man/auk.Rd | 1 man/auk_bbox.Rd | 36 + man/auk_bcr.Rd | 26 - man/auk_breeding.Rd | 26 - man/auk_clean.Rd | 8 man/auk_complete.Rd | 26 - man/auk_country.Rd | 26 - man/auk_date.Rd | 26 - man/auk_distance.Rd | 26 - man/auk_duration.Rd | 26 - man/auk_ebd.Rd | 3 man/auk_ebd_version.Rd | 7 man/auk_extent.Rd | 26 - man/auk_filter.Rd | 57 +- man/auk_get_awk_path.Rd | 7 man/auk_get_ebd_path.Rd | 7 man/auk_last_edited.Rd | 26 - man/auk_observer.Rd | 26 - man/auk_project.Rd | 26 - man/auk_protocol.Rd | 26 - man/auk_rollup.Rd | 3 man/auk_sampling.Rd | 3 man/auk_select.Rd | 5 man/auk_set_awk_path.Rd | 7 man/auk_set_ebd_path.Rd | 7 man/auk_species.Rd | 26 - man/auk_split.Rd | 25 - man/auk_state.Rd | 26 - man/auk_time.Rd | 26 - man/auk_unique.Rd | 13 man/auk_version.Rd | 9 man/auk_zerofill.Rd | 53 +- man/bcr_codes.Rd | 11 man/ebird_species.Rd | 14 man/ebird_states.Rd | 11 man/ebird_taxonomy.Rd | 11 man/filter_repeat_visits.Rd | 35 + man/format_unmarked_occu.Rd | 12 man/get_ebird_taxonomy.Rd | 8 man/read_ebd.Rd | 15 man/valid_protocols.Rd | 4 tests/testthat/test_ebird-species.r | 1 tests/testthat/test_read.r | 1 tests/testthat/test_unmarked.r | 107 ++-- vignettes/auk.Rmd | 6 vignettes/development.Rmd | 4 67 files changed, 1222 insertions(+), 898 deletions(-)
Title: Network of Differential Equations
Description: Simulates a network of ordinary differential equations of order
two. The package provides an easy interface to construct networks. In addition
you are able to define different external triggers to manipulate the trajectory.
The method is described by Surmann, Ligges, and Weihs (2014) <doi:10.1109/ENERGYCON.2014.6850482>.
Author: Dirk Surmann [aut, cre] (<https://orcid.org/0000-0003-0873-137X>)
Maintainer: Dirk Surmann <surmann@statistik.tu-dortmund.de>
Diff between ODEnetwork versions 1.3.1 dated 2018-05-22 and 1.3.2 dated 2020-04-03
DESCRIPTION | 10 - MD5 | 28 ++--- NEWS.md | 6 + R/createEvents.R | 1 R/setEvents.R | 1 build/vignette.rds |binary inst/doc/ODEnetwork.R | 37 +++---- inst/doc/ODEnetwork.Rmd | 1 inst/doc/ODEnetwork.html | 231 ++++++++++++++++++++++++++-------------------- man/createEvents.Rd | 1 man/estimateDistances.Rd | 8 + man/setEvents.Rd | 1 man/updateOscillators.Rd | 12 +- tests/testthat/Rplots.pdf |binary vignettes/ODEnetwork.Rmd | 1 15 files changed, 201 insertions(+), 137 deletions(-)
More information about infinitefactor at CRAN
Permanent link
Title: Utilities for Graphical Rendering
Description: Useful tools for writing vector graphics devices.
Author: David Gohel [aut, cre],
Hadley Wickham [aut],
Lionel Henry [aut],
Jeroen Ooms [aut] (<https://orcid.org/0000-0002-4035-0289>),
Yixuan Qiu [ctb],
R Core Team [cph] (Cairo code from X11 device),
RStudio [cph]
Maintainer: David Gohel <david.gohel@ardata.fr>
Diff between gdtools versions 0.2.1 dated 2019-10-14 and 0.2.2 dated 2020-04-03
DESCRIPTION | 6 +++--- MD5 | 9 +++++---- NEWS | 4 ++++ cleanup | 2 +- configure | 26 +++++++++++++------------- src/tests |only 6 files changed, 26 insertions(+), 21 deletions(-)
Title: Extensible Style-Sheet Language Transformations
Description: An extension for the 'xml2' package to transform XML documents
by applying an 'xslt' style-sheet.
Author: Jeroen Ooms [aut, cre] (<https://orcid.org/0000-0002-4035-0289>)
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between xslt versions 1.3 dated 2017-11-18 and 1.4 dated 2020-04-03
DESCRIPTION | 16 ++++++++++------ MD5 | 20 ++++++++++---------- NAMESPACE | 1 + NEWS | 6 ++++++ R/RcppExports.R | 8 ++++---- R/xml_xslt.R | 1 + configure | 25 +++++++++++++++++-------- src/Makevars.win | 10 +++++----- src/RcppExports.cpp | 26 +++++++++++++------------- src/xslt_init.cpp | 2 +- tools/winlibs.R | 7 ++++--- 11 files changed, 72 insertions(+), 50 deletions(-)
Title: Calculation and Visualization of the Impact Effect Size Measure
Description: A non-parametric effect size measure capturing changes in central tendency or shape of data distributions. The package provides the necessary functions to calculate and plot the Impact effect size measure between two groups.
Author: Jorn Lotsch[aut,cre], Alfred Ultsch[aut]
Maintainer: Jorn Lotsch <j.loetsch@em.uni-frankfurt.de>
Diff between ImpactEffectsize versions 0.3.2 dated 2020-02-03 and 0.4.0 dated 2020-04-03
ImpactEffectsize-0.3.2/ImpactEffectsize/R/GMD.R |only ImpactEffectsize-0.3.2/ImpactEffectsize/man/GMD.Rd |only ImpactEffectsize-0.4.0/ImpactEffectsize/DESCRIPTION | 10 +- ImpactEffectsize-0.4.0/ImpactEffectsize/MD5 | 18 ++- ImpactEffectsize-0.4.0/ImpactEffectsize/NAMESPACE | 9 - ImpactEffectsize-0.4.0/ImpactEffectsize/R/ClassGMD.R | 11 +- ImpactEffectsize-0.4.0/ImpactEffectsize/R/Impact.R | 35 ++++--- ImpactEffectsize-0.4.0/ImpactEffectsize/R/plot2Densities.R | 46 +++++----- ImpactEffectsize-0.4.0/ImpactEffectsize/data/BcellLymphomaCD79.rda |only ImpactEffectsize-0.4.0/ImpactEffectsize/data/FeatureselectionData.rda |binary ImpactEffectsize-0.4.0/ImpactEffectsize/data/SameMeansData.rda |only ImpactEffectsize-0.4.0/ImpactEffectsize/man/BcellLymphomaCD79.Rd |only ImpactEffectsize-0.4.0/ImpactEffectsize/man/SameMeansData.Rd |only 13 files changed, 69 insertions(+), 60 deletions(-)
More information about ImpactEffectsize at CRAN
Permanent link
Title: Read, Manipulate, Explore Chess PGN Files and R API to UCI Chess
Engines
Description: Provides functions for reading *.PGN files with more than one game, including large files without copying it into RAM (using 'ff' package or 'RSQLite' package). Handle chess data and chess aggregated data, count figure moves statistics, create player profile, plot winning chances, browse openings. Set of functions of R API to communicate with UCI-protocol based chess engines.
Author: Wojciech Rosa
Maintainer: Wojciech Rosa <w.rosa@pollub.pl>
Diff between bigchess versions 1.7.0 dated 2020-01-31 and 1.7.1 dated 2020-04-03
DESCRIPTION | 6 +++--- MD5 | 4 ++-- R/extract_moves.R | 4 ++-- 3 files changed, 7 insertions(+), 7 deletions(-)
Title: The Pareto and the Piecewise Pareto Distribution
Description: Utilities for the Pareto and piecewise Pareto distribution
that are useful for reinsurance pricing. In particular, the package provides
a non-trivial algorithm that can be used to match the expected losses of a
tower of reinsurance layers with a layer-independent collective risk model.
The theoretical background of the matching algorithm and most other methods
are described in Ulrich Riegel (2018) <doi:10.1007/s13385-018-0177-3>.
Author: Ulrich Riegel [aut, cre]
Maintainer: Ulrich Riegel <ulrich.riegel@gmx.de>
Diff between Pareto versions 1.1.3 dated 2020-02-13 and 1.1.5 dated 2020-04-03
DESCRIPTION | 6 +- MD5 | 8 +-- NEWS.md | 5 ++ R/Functions.R | 121 ++++++++++++++++++++++++++++++++++++--------------- inst/doc/Pareto.html | 20 ++++---- 5 files changed, 109 insertions(+), 51 deletions(-)
Title: Quickly Get Datetime Data Ready for Analysis
Description: Transforms datetime data into a format ready for analysis.
It offers two core functionalities; aggregating data to a higher level interval
(thicken) and imputing records where observations were absent (pad).
Author: Edwin Thoen
Maintainer: Edwin Thoen <edwinthoen@gmail.com>
Diff between padr versions 0.5.0 dated 2019-06-11 and 0.5.1 dated 2020-04-03
padr-0.5.0/padr/tests/testthat/test_zzz_lintr.R |only padr-0.5.1/padr/DESCRIPTION | 8 +-- padr-0.5.1/padr/MD5 | 43 +++++++++---------- padr-0.5.1/padr/NEWS.md | 4 + padr-0.5.1/padr/R/RcppExports.R | 12 ++--- padr-0.5.1/padr/R/pad.R | 2 padr-0.5.1/padr/R/thicken.R | 4 - padr-0.5.1/padr/inst/doc/padr.html | 10 ++-- padr-0.5.1/padr/inst/doc/padr_custom.html | 8 +-- padr-0.5.1/padr/inst/doc/padr_implementation.html | 4 - padr-0.5.1/padr/man/format_interval.Rd | 5 +- padr-0.5.1/padr/man/pad.Rd | 4 - padr-0.5.1/padr/man/pad_cust.Rd | 3 - padr-0.5.1/padr/man/pad_int.Rd | 3 - padr-0.5.1/padr/man/thicken.Rd | 3 - padr-0.5.1/padr/src/RcppExports.cpp | 32 +++++++------- padr-0.5.1/padr/tests/testthat/library.R | 2 padr-0.5.1/padr/tests/testthat/test_fill_functions.R | 26 +++++++---- padr-0.5.1/padr/tests/testthat/test_pad.R | 2 padr-0.5.1/padr/tests/testthat/test_pad_cust.R | 16 +++---- padr-0.5.1/padr/tests/testthat/test_pad_int.R | 2 padr-0.5.1/padr/tests/testthat/test_subset_span.R | 1 padr-0.5.1/padr/tests/testthat/test_thicken.R | 4 - 23 files changed, 106 insertions(+), 92 deletions(-)
Title: Leadership-Inference Framework for Multivariate Time Series
Description: A leadership-inference framework for multivariate time series. The framework for multiple-faction-leadership inference from coordinated activities or 'mFLICA' uses a notion of a leader as an individual who initiates collective patterns that everyone in a group follows. Given a set of time series of individual activities, our goal is to identify periods of coordinated activity, find factions of coordination if more than one exist, as well as identify leaders of each faction. For each time step, the framework infers following relations between individual time series, then identifying a leader of each faction whom many individuals follow but it follows no one. A faction is defined as a group of individuals that everyone follows the same leader. 'mFLICA' reports following relations, leaders of factions, and members of each faction for each time step. Please see Chainarong Amornbunchornvej and Tanya Berger-Wolf (2018) <doi:10.1137/1.9781611975321.62> when referring to this package in publications.
Author: Chainarong Amornbunchornvej [aut, cre]
(<https://orcid.org/0000-0003-3131-0370>)
Maintainer: Chainarong Amornbunchornvej <grandca@gmail.com>
Diff between mFLICA versions 0.1.0 dated 2020-02-11 and 0.1.1 dated 2020-04-03
mFLICA-0.1.0/mFLICA/inst/mFLICA_0.1.0.pdf |only mFLICA-0.1.1/mFLICA/DESCRIPTION | 9 ++++----- mFLICA-0.1.1/mFLICA/MD5 | 15 +++++++-------- mFLICA-0.1.1/mFLICA/NEWS.md | 6 +++++- mFLICA-0.1.1/mFLICA/R/getDynamicFollNet.R | 12 ++++++++++-- mFLICA-0.1.1/mFLICA/R/mFLICA.R | 6 +++--- mFLICA-0.1.1/mFLICA/README.md | 9 +++++++-- mFLICA-0.1.1/mFLICA/man/getDynamicFollNet.Rd | 11 ++++++++++- mFLICA-0.1.1/mFLICA/man/mFLICA.Rd | 11 ++++++++++- 9 files changed, 56 insertions(+), 23 deletions(-)
Title: Visualising Bipartite Networks and Calculating Some (Ecological)
Indices
Description: Functions to visualise webs and calculate a series of indices commonly used to describe pattern in (ecological) webs. It focuses on webs consisting of only two levels (bipartite), e.g. pollination webs or predator-prey-webs. Visualisation is important to get an idea of what we are actually looking at, while the indices summarise different aspects of the web's topology.
Author: Carsten F. Dormann, Jochen Fruend and Bernd Gruber, with additional code from Stephen Beckett, Mariano Devoto, Gabriel Felix, Jose Iriondo, Tove Opsahl, Rafael Pinheiro, Rouven Strauss and Diego Vazquez, also based on C-code developed by Nils Bluethgen, Aaron Clauset/Rouven Strauss and Miguel Rodriguez-Girones
Maintainer: Carsten F. Dormann <carsten.dormann@biom.uni-freiburg.de>
Diff between bipartite versions 2.14 dated 2020-01-08 and 2.15 dated 2020-04-03
DESCRIPTION | 10 +-- MD5 | 52 +++++++++-------- NAMESPACE | 4 - R/as.one.mode.r | 112 ++++++++++++++++++------------------ R/betalinkr.R | 7 +- R/extinction.R | 128 +++++++++++++++++++++--------------------- R/plotmatrix.R |only R/robustness.r | 2 R/sortmatrix.R |only build/vignette.rds |binary inst/doc/Dormann2008Rnews.pdf |binary inst/doc/Intro2bipartite.R | 1 inst/doc/Intro2bipartite.pdf |binary man/Safariland.Rd | 8 -- man/as.one.mode.Rd | 4 - man/as.tnet.Rd | 2 man/barrett1987.Rd | 2 man/betweenness_w.Rd | 4 - man/bipartite-package.Rd | 15 ++++ man/closeness_w.Rd | 4 - man/clustering_tm.Rd | 2 man/elberling1999.Rd | 2 man/inouye1988.Rd | 2 man/kato1990.Rd | 2 man/ollerton2003.Rd | 2 man/plotmatrix.Rd |only man/projecting_tm.Rd | 6 - man/small1976.Rd | 2 man/sortmatrix.Rd |only 29 files changed, 197 insertions(+), 176 deletions(-)
Title: Variable Selection in Partial Least Squares
Description: Interfaces and methods for variable selection in Partial Least
Squares. The methods include filter methods, wrapper methods and embedded
methods. Both regression and classification is supported.
Author: Kristian Hovde Liland, Tahir Mehmood, Solve Sæbø
Maintainer: Kristian Hovde Liland <kristian.liland@nmbu.no>
Diff between plsVarSel versions 0.9.5 dated 2020-02-03 and 0.9.6 dated 2020-04-03
DESCRIPTION | 10 +++++----- MD5 | 26 +++++++++++++------------- NEWS | 36 ++++++++++++++++++++---------------- R/REP.R | 6 +++--- R/filters.R | 4 ++++ man/T2_pls.Rd | 3 +-- man/VIP.Rd | 4 ++++ man/filterPLSR.Rd | 23 ++++++++++++++++++----- man/ipw_pls.Rd | 11 +++++++++-- man/mcuve_pls.Rd | 3 +-- man/mvrV.Rd | 20 ++++++++++++++++---- man/shaving.Rd | 24 ++++++++++++++++++------ man/spa_pls.Rd | 3 +-- man/summary.mvrV.Rd | 9 +++++++-- 14 files changed, 120 insertions(+), 62 deletions(-)
Title: Check-Fields and Check-Boxes for 'rmarkdown'
Description: Creates auto checking check-fields and check-boxes for 'rmarkdown' html. It could be used in class, when teacher share materials and tasks, so student can solve some problems and check themselves. In contrast with the 'learnr' package the 'checkdown' package works without 'shiny'.
Author: George Moroz
Maintainer: George Moroz <agricolamz@gmail.com>
Diff between checkdown versions 0.0.2 dated 2020-03-18 and 0.0.3 dated 2020-04-03
DESCRIPTION | 8 +- MD5 | 18 +++-- NEWS | 8 ++ R/check_question.R | 133 ++++++++++++++++++++++++++++++------------ inst/CITATION |only inst/doc/start_checkdown.R | 11 +++ inst/doc/start_checkdown.Rmd | 24 ++++++- inst/doc/start_checkdown.html | 132 ++++++++++++++++++++++++++--------------- man/check_question.Rd | 16 +++-- man/figures |only vignettes/start_checkdown.Rmd | 24 ++++++- 11 files changed, 267 insertions(+), 107 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-01 1.0.5
2020-02-29 1.0.4
2019-12-10 1.0.2
2019-11-26 1.0.1
2019-11-22 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-04-30 1.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-01-14 1.3.0
2016-07-23 1.2.1
2016-06-29 1.2.0
2016-06-20 1.1.1
2016-02-20 1.1.0
2015-12-10 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-02-14 2.0-3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-26 0.5.4
2018-06-10 0.5.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-19 1.0.2
2019-08-30 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-02-09 0.6-1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-12-01 1.1.8
2019-10-01 1.1.6
2019-09-29 1.1.5
2019-04-26 1.1.4
2019-01-21 1.1.2
2018-10-05 1.1.1
2018-10-04 1.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-04-23 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-15 0.7.0
2019-11-06 0.6.1
2019-10-14 0.6
2019-08-25 0.5.2
2019-06-29 0.5.1
2019-05-20 0.5.0
2019-04-16 0.4.0
2019-03-04 0.3.8
2019-02-04 0.3.6
2018-10-28 0.3.5
2018-09-30 0.3.4
2018-09-03 0.3.2
2018-09-02 0.3.0
2018-09-02 0.3.1
2018-08-05 0.2.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-12-16 0.2.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-16 1.4.6
2019-12-13 1.4.5
2019-03-20 1.2
2017-11-20 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-03-28 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-19 0.99.18
Title: Simple Definition Of Time Intervals
Description: Simple definition of time intervals for the current, previous, and next week, month, quarter and year.
Author: Alexey Seleznev [aut, cre]
Maintainer: Alexey Seleznev <selesnow@gmail.com>
Diff between timeperiodsR versions 0.6.1 dated 2020-01-09 and 0.6.2 dated 2020-04-03
DESCRIPTION | 8 ++-- MD5 | 14 +++---- NEWS.md | 6 +++ R/custom_period.R | 2 - R/last_n_quarters.R | 2 - R/zzz.R | 6 +++ build/partial.rdb |binary inst/doc/tpr_intro.html | 95 +++++++++++++++++++++++++----------------------- 8 files changed, 75 insertions(+), 58 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-13 0.0.0.3
2017-10-16 0.0.0.2
2017-10-14 0.0.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-24 0.5.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-02 0.0.4
2019-12-19 0.0.3
2019-12-16 0.0.2
2019-07-03 0.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-02-06 1.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-10-05 0.3.4
2018-09-15 0.3.3
2018-05-28 0.3.2
2018-05-17 0.3.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-05-20 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-10-03 0.8
2018-08-10 0.7
2018-06-27 0.6
2017-12-11 0.5
2017-06-01 0.4
2017-04-12 0.3
2016-10-25 0.2
2016-08-18 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-02-28 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-08-22 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-08-01 0.4.0
2018-11-09 0.3.3
2018-10-15 0.3.1
2018-01-17 0.2.4
2017-12-15 0.2.2
2017-08-08 0.1.2
2017-07-10 0.1.1
2017-06-27 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-29 0.3.0
2019-09-12 0.2.0
2019-06-21 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-06-06 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-15 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-21 0.99.11
2018-06-10 0.99.10
2018-06-07 0.99.9
2018-05-17 0.99.8
2018-04-11 0.99.7
2018-03-26 0.99.5
2018-03-08 0.99
2018-02-02 0.98
2015-11-23 0.95.1
2015-11-19 0.95
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-06-10 1.0.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-09-12 0.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-08-28 2.0.0
2019-05-13 1.0.0
2017-10-16 0.2
2017-05-03 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-10-12 2.0
2018-04-03 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-12 1.0
2019-11-19 0.9.8
2019-11-18 0.9.7
2019-10-27 0.9.6
2019-06-06 0.9.4
2019-05-26 0.9.3
2019-05-17 0.9.2
2019-05-16 0.9.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-06-04 1.1.1
2018-05-07 1.0.3
Title: Gathering Metadata About Publications, Grants, Clinical Trials
from 'PubMed' Database
Description: A set of tools to extract bibliographic content from 'PubMed' database using 'NCBI' REST API <https://www.ncbi.nlm.nih.gov/home/develop/api/>.
Author: Massimo Aria [aut, cre] (<https://orcid.org/0000-0002-8517-9411>)
Maintainer: Massimo Aria <massimo.aria@gmail.com>
Diff between pubmedR versions 0.0.1 dated 2020-03-20 and 0.0.2 dated 2020-04-03
DESCRIPTION | 6 +++--- MD5 | 11 ++++++----- NEWS |only R/pmQueryTotalCount.R | 12 ++++++++++++ inst/doc/A_Brief_Example.Rmd | 3 +-- inst/doc/A_Brief_Example.html | 5 ++--- vignettes/A_Brief_Example.Rmd | 3 +-- 7 files changed, 25 insertions(+), 15 deletions(-)
Title: Build Dirichlet Process Objects for Bayesian Modelling
Description: Perform nonparametric Bayesian analysis using Dirichlet
processes without the need to program the inference algorithms.
Utilise included pre-built models or specify custom
models and allow the 'dirichletprocess' package to handle the
Markov chain Monte Carlo sampling.
Our Dirichlet process objects can act as building blocks for a variety
of statistical models including and not limited to: density estimation,
clustering and prior distributions in hierarchical models.
See Teh, Y. W. (2011)
<https://www.stats.ox.ac.uk/~teh/research/npbayes/Teh2010a.pdf>,
among many other sources.
Author: Gordon J. Ross [aut],
Dean Markwick [aut, cre],
Kees Mulder [ctb] (<https://orcid.org/0000-0002-5387-3812>)
Maintainer: Dean Markwick <dean.markwick@talk21.com>
Diff between dirichletprocess versions 0.3.1 dated 2019-12-11 and 0.3.1.1 dated 2020-04-03
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- build/vignette.rds |binary data/rats.rda |binary inst/doc/dirichletprocess.pdf |binary 5 files changed, 7 insertions(+), 7 deletions(-)
More information about dirichletprocess at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-13 0.3.5
2020-01-10 0.3.4
2019-08-07 0.2.2
2019-06-18 0.2.1
2019-06-13 0.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-08 1.1.7
2019-07-12 1.1.6
2019-03-29 1.1.5
2018-08-14 1.1.4
2018-04-13 1.1.3
2018-03-06 1.1.2
2018-01-29 1.1.1
2017-04-16 1.0.10
2017-03-14 1.0.9
2017-01-13 1.0.8
2017-01-12 1.0.7
2016-12-13 1.0.6
2016-11-23 1.0.5
2016-10-12 1.0.4
2016-08-26 1.0.3
2016-06-26 1.0.2
2016-04-22 1.0.1
2016-04-07 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-12-17 2.1.1
2017-08-22 2.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-10-22 1.2
2015-07-17 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-01-02 0.6.1
2018-11-06 0.5.1
2018-10-23 0.4.1
2018-07-11 0.3.1
2018-06-24 0.2.1
2018-04-28 0.1.1
2018-04-09 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-07-19 0.1-0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-01 0.2.2
2019-12-12 0.2.1
2019-10-13 0.2.0
2019-09-04 0.1.3
2019-08-19 0.1.2
2019-07-22 0.1.1
2019-06-19 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-06-16 2.1
2017-03-07 1.9
2017-02-26 1.8
2016-09-06 1.7
2016-01-06 1.6
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-04-13 0.0.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-05-04 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-12-17 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-04-01 0.2.4
2020-02-12 0.2.3
2019-06-15 0.2.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-09-03 0.9.1.14
2019-08-07 0.9.1.13.1
2019-04-02 0.9.1.12
2019-03-12 0.9.1.11
2019-03-05 0.9.1.10
2019-02-27 0.9.1.8
2019-02-19 0.9.1.6
2019-02-08 0.9.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-02-28 1.0.7
2018-05-30 1.0.6
2015-04-21 1.0.4
2015-03-20 1.0.3
2014-12-04 1.0.2
2014-09-26 1.0.1
2014-09-22 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-06-14 1.1.5
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-13 3.0.1
2019-07-10 3.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-26 0.3-3
2019-06-04 0.3-2
2019-02-20 0.3-1
2019-02-18 0.3-0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-15 1.1.6
2020-01-10 1.1.5
2019-08-24 1.1.4
2019-07-21 1.1.3
2019-01-27 1.1.2
2018-01-22 1.1.1
2018-01-09 1.1.0
2017-11-05 1.0.0
2017-09-01 0.9.1
2017-07-08 0.9
2016-12-16 0.8
2016-08-25 0.7
2016-08-01 0.6
2016-04-03 0.5
2016-03-25 0.4
2014-06-29 0.2
2014-06-27 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-17 0.2.2
2020-01-19 0.2.1
2019-10-25 0.2.0
2019-08-02 0.1.5
2019-07-03 0.1.4
2019-06-11 0.1.3
2019-05-28 0.1.2
2019-05-09 0.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-12-03 0.1.1
2019-05-12 0.1.0
2019-01-19 0.0.3
2018-11-15 0.0.2
Title: Analysis of Complex Survey Samples
Description: Summary statistics, two-sample tests, rank tests, generalised linear models, cumulative link models, Cox models, loglinear models, and general maximum pseudolikelihood estimation for multistage stratified, cluster-sampled, unequally weighted survey samples. Variances by Taylor series linearisation or replicate weights. Post-stratification, calibration, and raking. Two-phase subsampling designs. Graphics. PPS sampling without replacement. Principal components, factor analysis.
Author: Thomas Lumley
Maintainer: "Thomas Lumley" <t.lumley@auckland.ac.nz>
Diff between survey versions 3.37 dated 2020-01-21 and 4.0 dated 2020-04-03
DESCRIPTION | 6 - MD5 | 74 ++++++++--------- NAMESPACE | 16 +++ R/multistage.R | 26 ++++-- R/regtest.R | 60 ++++++++------ R/survey.R | 52 +++++++++--- R/surveyby.R | 214 ++++++++++++++++++++++++++++++++++++++++++++++++-- R/surveyrep.R | 10 ++ R/svykappa.R | 14 ++- R/svykm.R | 12 +- R/svynls.R |only R/sysdata.rda |binary THANKS | 2 build/vignette.rds |binary data/api.rda |binary data/crowd.rda |binary data/election.rda |binary data/fpc.rda |binary data/hospital.rda |binary data/mu284.rda |binary data/nhanes.rda |binary data/scd.rda |binary data/yrbs.rda |binary inst/CITATION | 17 +++ inst/NEWS | 23 +++++ inst/doc/domain.pdf |binary inst/doc/epi.pdf |binary inst/doc/phase1.pdf |binary inst/doc/pps.pdf |binary inst/doc/survey.pdf |binary man/surveysummary.Rd | 10 +- man/svyby.Rd | 25 ++++- man/svycontrast.Rd | 27 ++++-- man/svyglm.Rd | 33 +++++++ man/svykappa.Rd | 8 + man/svymle.Rd | 3 man/svynls.Rd |only man/svyratio.Rd | 9 +- man/withReplicates.Rd | 28 ++++++ 39 files changed, 552 insertions(+), 117 deletions(-)
Title: Robust Generalized Linear Models (GLM) using Mixtures
Description: Robust generalized linear models (GLM) using a mixture method, as described in Beath (2018) <doi:10.1080/02664763.2017.1414164>. This assumes that the data are a mixture of standard observations, being a generalised linear model, and outlier observations from an overdispersed generalized linear model. The overdispersed linear model is obtained by including a normally distributed random effect in the linear predictor of the generalized linear model.
Author: Ken Beath [aut, cre]
Maintainer: Ken Beath <ken.beath@mq.edu.au>
Diff between robmixglm versions 1.0-2 dated 2018-07-31 and 1.0-3 dated 2020-04-03
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- R/poisson.fit.robmixglm.R | 1 + R/robmixglm.R | 2 +- build/vignette.rds |binary inst/NEWS | 4 ++++ 6 files changed, 15 insertions(+), 10 deletions(-)
Title: Consistent Significance Controlled Variable Selection in Linear
Regression
Description: Provide consistent significance controlled variable selection procedure with different directions (forward, backward, stepwise) based on diverse criteria (AIC, BIC, adjusted r-square, and p-value). The algorithm selects a final model with only significant variables based on a correction choice of False Discovery Rate, Bonferroni, or no correction.
Author: Jongwook Kim, Adriano Zanin Zambom
Maintainer: Jongwook Kim <jongwook226@gmail.com>
Diff between SignifReg versions 2.1 dated 2019-06-26 and 2.1.1 dated 2020-04-03
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- R/SignifReg.R | 2 +- R/drop1SignifReg.R | 30 ++++++++++++++---------------- build/partial.rdb |binary man/add1summary.Rd | 2 +- man/drop1SignifReg.Rd | 4 ++-- man/drop1summary.Rd | 2 +- 8 files changed, 30 insertions(+), 32 deletions(-)
Title: Hierarchical and Grouped Time Series
Description: Provides methods for analysing and forecasting hierarchical and
grouped time series. The available forecast methods include bottom-up,
top-down, optimal combination reconciliation (Hyndman et al. 2011)
<doi:10.1016/j.csda.2011.03.006>, and trace minimization reconciliation
(Wickramasuriya et al. 2018) <doi:10.1080/01621459.2018.1448825>.
Author: Rob Hyndman [aut] (Package creator),
Alan Lee [aut] (Fast computation using recursive methods),
Earo Wang [aut, cre],
Shanika Wickramasuriya [aut] (Reconciliation via trace minimization)
Maintainer: Earo Wang <earo.wang@gmail.com>
Diff between hts versions 5.1.5 dated 2018-03-26 and 6.0.0 dated 2020-04-03
hts-5.1.5/hts/man/figure |only hts-6.0.0/hts/DESCRIPTION | 11 - hts-6.0.0/hts/MD5 | 68 ++++---- hts-6.0.0/hts/NEWS.md | 7 hts-6.0.0/hts/R/MinT.R | 300 ++++++++++++++++++++++--------------- hts-6.0.0/hts/R/MinTbpv.R |only hts-6.0.0/hts/R/accuracy-gts.R | 27 +-- hts-6.0.0/hts/R/bpv.R |only hts-6.0.0/hts/R/combinef.R | 308 ++++++++++++++++++++++++-------------- hts-6.0.0/hts/R/combinefm.R |only hts-6.0.0/hts/R/forecast-gts.R | 98 +++++++----- hts-6.0.0/hts/R/gts.R | 4 hts-6.0.0/hts/R/hts.R | 4 hts-6.0.0/hts/R/plot-gts.R | 4 hts-6.0.0/hts/R/smatrix.R | 4 hts-6.0.0/hts/R/tracemin.R | 80 ++++++++- hts-6.0.0/hts/README.md | 93 ++++++----- hts-6.0.0/hts/build/vignette.rds |binary hts-6.0.0/hts/inst/doc/hts.pdf |binary hts-6.0.0/hts/man/MinT.Rd | 77 +++++++-- hts-6.0.0/hts/man/accuracy.gts.Rd | 6 hts-6.0.0/hts/man/combinef.Rd | 81 +++++++-- hts-6.0.0/hts/man/figures |only hts-6.0.0/hts/man/forecast.gts.Rd | 91 +++++++---- hts-6.0.0/hts/man/gts-class.Rd | 6 hts-6.0.0/hts/man/hts-class.Rd | 4 hts-6.0.0/hts/man/htseg1.Rd | 4 hts-6.0.0/hts/man/infantgts.Rd | 4 hts-6.0.0/hts/man/plot.gts.Rd | 7 hts-6.0.0/hts/man/smatrix.Rd | 4 30 files changed, 840 insertions(+), 452 deletions(-)
Title: Calculates Disproportionate Impact When Binary Success Data are
Disaggregated by Subgroups
Description: Implements methods for calculating disproportionate impact: the percentage point gap, proportionality index, and the 80% index.
California Community Colleges Chancellor's Office (2017). Percentage Point Gap Method. <https://www.cccco.edu/-/media/CCCCO-Website/About-Us/Divisions/Digital-Innovation-and-Infrastructure/Research/Files/PercentagePointGapMethod2017.ashx>.
California Community Colleges Chancellor's Office (2014). Guidelines for Measuring Disproportionate Impact in Equity Plans. <https://www.cccco.edu/-/media/CCCCO-Website/About-Us/Divisions/Digital-Innovation-and-Infrastructure/Network-Operations/Accountability/Files/GUIDELINES-FOR-MEASURING-DISPROPORTIONATE-IMPACT-IN-EQUITY-PLANS.ashx>.
Author: Vinh Nguyen [aut, cre]
Maintainer: Vinh Nguyen <nguyenvq714@gmail.com>
Diff between DisImpact versions 0.0.6 dated 2020-03-24 and 0.0.7 dated 2020-04-03
DESCRIPTION | 6 +++--- MD5 | 14 +++++++------- NEWS | 3 +++ R/80_percent_index.R | 2 +- R/data_student_equity.R | 2 +- R/percentage_point_gap.R | 13 ++++++++----- R/proportionality_index.R | 2 +- inst/doc/Tutorial.html | 26 +++++++++++++------------- 8 files changed, 37 insertions(+), 31 deletions(-)
Title: Automatic Cognostic Summaries
Description: Automatically calculates cognostic groups for plot objects and list column plot objects. Results are returned in a nested data frame.
Author: Barret Schloerke [aut],
Ryan Hafen [ths, cre]
Maintainer: Ryan Hafen <rhafen@gmail.com>
Diff between autocogs versions 0.1.2 dated 2019-02-11 and 0.1.3 dated 2020-04-03
DESCRIPTION | 8 +++--- MD5 | 32 ++++++++++++------------ NEWS.md | 4 +++ R/add_cog_group.R | 4 +-- R/add_cog_group_.R | 16 ++++++------ R/add_layer_cogs.R | 5 +-- R/autocog.R | 2 - R/cog_spec.R | 2 - R/field_info.R | 2 - R/known_cog_groups.R | 51 +++++++++++++++++++++++++++----------- R/known_layer_cogs.R | 57 ++++++++++++++++++++++++++++++------------- R/layer_info.R | 11 ++++++-- R/plot_cogs.R | 10 +++---- README.md | 2 - man/cog_spec.Rd | 35 ++++++++++++++++++-------- man/field_info.Rd | 6 +++- tests/testthat/test-layers.R | 2 - 17 files changed, 160 insertions(+), 89 deletions(-)