Title: Parse XML
Description: Work with XML files using a simple, consistent
interface. Built on top of the 'libxml2' C library.
Author: Hadley Wickham [aut],
Jim Hester [aut, cre],
Jeroen Ooms [aut],
RStudio [cph],
R Foundation [ctb] (Copy of R-project homepage cached as example)
Maintainer: Jim Hester <jim.hester@rstudio.com>
Diff between xml2 versions 1.3.1 dated 2020-04-09 and 1.3.2 dated 2020-04-23
DESCRIPTION | 6 +++--- MD5 | 22 +++++++++++----------- NEWS.md | 8 ++++++++ R/xml_name.R | 3 --- R/xml_parse.R | 7 +++++-- README.md | 1 - build/vignette.rds |binary build/xml2.pdf |binary configure | 7 +++++++ inst/doc/modification.html | 12 ++++++------ src/xml2_doc.cpp | 4 ++-- tests/testthat/test-read-xml.R | 9 +++++++++ 12 files changed, 51 insertions(+), 28 deletions(-)
Title: Download, Compile and Link 'OpenBLAS' Library with R
Description: The 'ropenblas' package (<https://prdm0.github.io/ropenblas/>) is useful for users of any 'GNU/Linux' distribution. It will be possible to download, compile and link the 'OpenBLAS' library (<https://www.openblas.net/>) with the R language, always by the same procedure, regardless of the 'GNU/Linux' distribution used. With the 'ropenblas' package it is possible to download, compile and link the latest version of the 'OpenBLAS' library even the repositories of the 'GNU/Linux' distribution used do not include the latest versions of 'OpenBLAS'. If of interest, older versions of the 'OpenBLAS' library may be considered. Linking R with an optimized version of 'BLAS' (<http://www.netlib.org/blas/>) may improve the computational performance of R code. The 'OpenBLAS' library is an optimized implementation of 'BLAS' that can be easily linked to R with the 'ropenblas' package.
Author: Pedro Rafael D. Marinho [aut, cre]
Maintainer: Pedro Rafael D. Marinho <pedro.rafael.marinho@gmail.com>
Diff between ropenblas versions 0.2.3 dated 2020-04-13 and 0.2.4 dated 2020-04-23
DESCRIPTION | 6 +- MD5 | 19 ++++----- NAMESPACE | 2 NEWS.md | 11 ++++- R/ropenblas.R | 89 +++++++++++++++++++++++++++++++++++++++++-- README.md | 24 +++++++++++ man/last_version_openblas.Rd | 2 man/last_version_r.Rd | 2 man/link_again.Rd |only man/rcompiler.Rd | 2 man/ropenblas.Rd | 2 11 files changed, 136 insertions(+), 23 deletions(-)
Title: Computerized Adaptive Testing and Decision Trees
Description: Implements the Merged Tree-CAT method (Javier Rodriguez-Cuadrado et al., 2020, <doi:10.1016/j.eswa.2019.113066>) to generate Computerized Adaptive Tests (CATs) based on a decision tree. The tree growth is controlled by merging branches with similar trait distributions and estimations. This package has the necessary tools for creating CATs and estimate the subject's ability level.
Author: Javier Rodriguez-Cuadrado [aut, cre],
Juan C. Laria [aut],
David Delgado-Gomez [aut]
Maintainer: Javier Rodriguez-Cuadrado <javierro@est-econ.uc3m.es>
Diff between cat.dt versions 0.1.0 dated 2019-08-06 and 0.2.0 dated 2020-04-23
DESCRIPTION | 14 +++-- MD5 | 36 ++++++++++---- NAMESPACE | 5 ++ R/CAT_DT.R | 26 +++++++--- R/CAT_ability_est.R | 105 +++++++++++++++++++++++++++++++++++++++---- R/CAT_ability_est_group.R |only R/CAT_summary.R |only R/allocate_sons.R | 70 +++++++++++++++------------- R/plot_tree.R |only README.md |only build |only inst |only man/CAT_DT.Rd | 21 ++++++-- man/CAT_ability_est.Rd | 23 ++++++++- man/CAT_ability_est_group.Rd |only man/cat.dt.Rd | 1 man/create_levels.Rd | 14 ++++- man/itemBank.Rd | 4 + man/itemRes.Rd | 4 + man/plot_tree.Rd |only man/predict.cat.dt.Rd |only man/summary.cat.dt.Rd |only vignettes |only 23 files changed, 245 insertions(+), 78 deletions(-)
Title: Multiplicative Interaction Models Diagnostics and Visualization
Description: Performs diagnostic tests of multiplicative interaction models and plots non-linear marginal effects of a treatment on an outcome across different values of a moderator.
Author: Jens Hainmueller, Jonathan Mummolo, Yiqing Xu and Ziyi Liu
Maintainer: Yiqing Xu <yiqingxu@stanford.edu>
Diff between interflex versions 1.0.8 dated 2019-06-20 and 1.1.3 dated 2020-04-23
interflex-1.0.8/interflex/man/inter.plot.Rd |only interflex-1.1.3/interflex/DESCRIPTION | 15 interflex-1.1.3/interflex/MD5 | 63 interflex-1.1.3/interflex/NAMESPACE | 30 interflex-1.1.3/interflex/R/RcppExports.R | 18 interflex-1.1.3/interflex/R/binning.R |only interflex-1.1.3/interflex/R/cross_validation.R |only interflex-1.1.3/interflex/R/gam.R |only interflex-1.1.3/interflex/R/interflex.R | 2508 ++------------------ interflex-1.1.3/interflex/R/kernel.R |only interflex-1.1.3/interflex/R/linear.R |only interflex-1.1.3/interflex/R/plot.R |only interflex-1.1.3/interflex/R/plot_pool.R |only interflex-1.1.3/interflex/R/predict.R |only interflex-1.1.3/interflex/R/raw.R |only interflex-1.1.3/interflex/R/ttest.R |only interflex-1.1.3/interflex/R/vcluster.R |only interflex-1.1.3/interflex/R/wls.R |only interflex-1.1.3/interflex/R/zzz.r | 3 interflex-1.1.3/interflex/README.md | 2 interflex-1.1.3/interflex/data/interflex.RData |binary interflex-1.1.3/interflex/man/inter.binning.Rd | 70 interflex-1.1.3/interflex/man/inter.gam.Rd | 9 interflex-1.1.3/interflex/man/inter.kernel.Rd | 73 interflex-1.1.3/interflex/man/inter.linear.Rd |only interflex-1.1.3/interflex/man/inter.raw.Rd | 24 interflex-1.1.3/interflex/man/inter.test.Rd |only interflex-1.1.3/interflex/man/interflex-internal.Rd | 6 interflex-1.1.3/interflex/man/interflex-package.Rd | 8 interflex-1.1.3/interflex/man/interflex.Rd |only interflex-1.1.3/interflex/man/plot.interflex.Rd |only interflex-1.1.3/interflex/man/predict.interflex.Rd |only interflex-1.1.3/interflex/man/s1.Rd | 3 interflex-1.1.3/interflex/man/s2.Rd | 3 interflex-1.1.3/interflex/man/s3.Rd | 3 interflex-1.1.3/interflex/man/s4.Rd | 2 interflex-1.1.3/interflex/man/s5.Rd |only interflex-1.1.3/interflex/src/Makevars | 15 interflex-1.1.3/interflex/src/Makevars.win | 14 interflex-1.1.3/interflex/src/RcppExports.cpp | 24 interflex-1.1.3/interflex/src/fastplm.cpp | 148 - interflex-1.1.3/interflex/src/interflex_init.c | 31 42 files changed, 635 insertions(+), 2437 deletions(-)
Title: A 'Prometheus' Client for R Using the 'OpenMetrics' Format
Description: Provides a client for the open-source monitoring and alerting
toolkit, 'Prometheus', that emits metrics in the 'OpenMetrics' format. Allows
users to automatically instrument 'Plumber' and 'Shiny' applications, collect
standard process metrics, as well as define custom counter, gauge, and
histogram metrics of their own.
Author: Aaron Jacobs [aut, cre],
Crescendo Technology Ltd. [cph]
Maintainer: Aaron Jacobs <atheriel@gmail.com>
Diff between openmetrics versions 0.1.0 dated 2020-04-14 and 0.1.1 dated 2020-04-23
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS.md | 6 ++++++ R/defaults.R | 4 +++- 4 files changed, 15 insertions(+), 7 deletions(-)
Title: Interface to the 'g:Profiler' Toolset
Description: A toolset for functional enrichment analysis and visualization, gene/protein/SNP identifier conversion and mapping orthologous genes across species via 'g:Profiler' (<https://biit.cs.ut.ee/gprofiler>).
The main tools are:
(1) 'g:GOSt' - functional enrichment analysis and visualization of gene lists;
(2) 'g:Convert' - gene/protein/transcript identifier conversion across various namespaces;
(3) 'g:Orth' - orthology search across species;
(4) 'g:SNPense' - mapping SNP rs identifiers to chromosome positions, genes and variant effects
This package is an R interface corresponding to the 2019 update of 'g:Profiler' and provides access to 'g:Profiler' for versions 'e94_eg41_p11' and higher. See the package 'gProfileR' for accessing older versions from the 'g:Profiler' toolset.
Author: Liis Kolberg <liis.kolberg@ut.ee>, Uku Raudvere <uku.raudvere@ut.ee>
Maintainer: Liis Kolberg <liis.kolberg@ut.ee>
Diff between gprofiler2 versions 0.1.8 dated 2019-12-18 and 0.1.9 dated 2020-04-23
DESCRIPTION | 12 MD5 | 33 - R/gprofiler2.R | 253 +++++++---- inst/doc/gprofiler2.R | 105 +++- inst/doc/gprofiler2.Rmd | 78 +++ inst/doc/gprofiler2.html | 612 ++++++++++++++++------------- man/gconvert.Rd | 14 man/gorth.Rd | 15 man/gost.Rd | 30 - man/gostplot.Rd | 12 man/gsnpense.Rd | 6 man/publish_gostplot.Rd | 11 man/publish_gosttable.Rd | 15 man/random_query.Rd | 2 vignettes/extdata/biomed-central.csl |only vignettes/extdata/gProfiler.gem.txt |only vignettes/extdata/gProfiler_chromX.gem.txt |only vignettes/extdata/gProfiler_chromY.gem.txt |only vignettes/extdata/references.bib |only vignettes/gprofiler2.Rmd | 78 +++ 20 files changed, 829 insertions(+), 447 deletions(-)
Title: Analyze Experimental High-Throughput (Omics) Data
Description: The efficient treatment and convenient analysis of experimental high-throughput (omics) data gets facilitated through this collection of diverse functions. Several functions address advanced object-conversions, like manipulating lists of lists or lists of arrays, reorganizing lists to arrays or into separate vectors, merging of multiple entries, etc. Another set of functions provides speed-optimized calculation of standard deviation (sd), coefficient of variance (CV) or standard error of the mean (SEM) for data in matrixes or means per line with respect to additional grouping (eg n groups of replicates). Other functions facilitate dealing with non-redundant information, by indexing unique, adding counters to redundant or eliminating lines with respect redundancy in a given reference-column, etc. Help is provided to identify very closely matching numeric values to generate (partial) distance matrixes for very big data in a memory efficient manner or to reduce the complexity of large data-sets by combining very close values. Many times large experimental datasets need some additional filtering, adequate functions are provided. Batch reading (or writing) of sets of files and combining data to arrays is supported, too. Convenient data normalization is supported in various different modes, parameter estimation via permutations or boot-strap as well as flexible testing of multiple pair-wise combinations using the framework of 'limma' is provided, too.
Author: Wolfgang Raffelsberger [aut, cre]
Maintainer: Wolfgang Raffelsberger <w.raffelsberger@unistra.fr>
Diff between wrMisc versions 1.1.0 dated 2019-12-09 and 1.2.0 dated 2020-04-23
DESCRIPTION | 15 - MD5 | 310 ++++++++++++++++++++------------------ NAMESPACE | 9 - R/asSepList.R | 12 + R/cbindNR.R | 39 +++- R/closeMatchMatrix.R | 2 R/colorAccording2.R | 32 --- R/completeArrLst.R | 2 R/convColorToTransp.R |only R/convMatr2df.R | 2 R/convToNum.R | 12 - R/correctToUnique.R | 4 R/extrColsDeX.R |only R/filt3dimArr.R | 7 R/filtSizeUniq.R | 3 R/filterList.R |only R/linRegrParamAndPVal.R |only R/matchNamesWithReverseParts.R |only R/matr2list.R | 4 R/normalizeThis.R | 63 +++---- R/presenceFilt.R | 16 - R/randIndFx.R | 2 R/rankToContigTab.R |only R/readVarColumns.R |only R/readXlsxBatch.R | 2 R/rowGrpMeans.R | 2 R/rowGrpSds.R | 11 - R/rowSds.R | 3 R/transpGraySca.R |only build |only inst/doc |only inst/extdata/Names1.tsv |only man/XYToDiffPpm.Rd | 66 ++++---- man/addBeforFileExtension.Rd | 52 +++--- man/adjBy2ptReg.Rd | 75 ++++----- man/arrayCV.Rd | 64 +++---- man/asSepList.Rd | 84 +++++----- man/buildTree.Rd | 85 +++++----- man/cbindNR.Rd | 83 +++++----- man/checkAvSd.Rd | 102 ++++++------ man/checkGrpOrder.Rd | 60 +++---- man/checkGrpOrderSEM.Rd | 91 ++++++----- man/checkSimValueInSer.Rd | 58 +++---- man/checkStrictOrder.Rd | 54 +++--- man/checkVectLength.Rd | 65 ++++--- man/cleanReplicates.Rd | 84 +++++----- man/closeMatchMatrix.Rd | 144 +++++++++-------- man/coinPermTest.Rd | 76 +++++---- man/colMedSds.Rd | 54 +++--- man/colSds.Rd | 52 +++--- man/colorAccording2.Rd | 87 +++++----- man/combineByEitherFactor.Rd | 111 +++++++------ man/combineOverlapInfo.Rd | 109 +++++++------ man/combineRedBasedOnCol.Rd | 75 ++++----- man/combineReplFromListToMatr.Rd | 60 +++---- man/combineSingleT.Rd | 52 +++--- man/completeArrLst.Rd | 72 ++++---- man/contribToContigPerFrag.Rd | 66 ++++---- man/conv01toColNa.Rd | 62 +++---- man/convColorToTransp.Rd |only man/convMatr2df.Rd | 97 ++++++----- man/convToNum.Rd | 101 ++++++------ man/correctToUnique.Rd | 72 ++++---- man/countCloseToLimits.Rd | 72 ++++---- man/countSameStartEnd.Rd | 66 ++++---- man/cutArrayInCluLike.Rd | 52 +++--- man/cutAtMultSites.Rd | 54 +++--- man/cutToNgrp.Rd | 66 ++++---- man/diffCombin.Rd | 63 +++---- man/diffPPM.Rd | 66 ++++---- man/elimCloseCoord.Rd | 83 +++++----- man/equLenNumber.Rd | 58 +++---- man/exclExtrValues.Rd | 89 +++++----- man/exponNormalize.Rd | 140 +++++++++-------- man/extr1chan.Rd | 76 ++++----- man/extrColsDeX.Rd |only man/extrNumericFromMatr.Rd | 61 +++---- man/extrSpcText.Rd | 79 +++++---- man/extractLast2numericParts.Rd | 58 +++---- man/filt3dimArr.Rd | 62 +++---- man/filtSizeUniq.Rd | 99 ++++++------ man/filterList.Rd |only man/findCloseMatch.Rd | 126 ++++++++------- man/findRepeated.Rd | 62 +++---- man/findSimilFrom2sets.Rd | 121 +++++++------- man/findUsableGroupRange.Rd | 62 +++---- man/firstLineOfDat.Rd | 64 +++---- man/firstOfRepLines.Rd | 68 ++++---- man/firstOfRepeated.Rd | 56 +++--- man/fuseAnnotMatr.Rd | 104 ++++++------ man/fuseCommonListElem.Rd | 72 ++++---- man/fusePairs.Rd | 75 +++++---- man/get1stOfRepeatedByCol.Rd | 88 +++++----- man/getValuesByUnique.Rd | 95 ++++++----- man/htmlSpecCharConv.Rd | 50 +++--- man/linRegrParamAndPVal.Rd |only man/listBatchReplace.Rd | 65 +++---- man/listGroupsByNames.Rd | 64 +++---- man/lmSelClu.Rd | 118 +++++++------- man/lrbind.Rd | 60 +++---- man/makeMAList.Rd | 82 +++++----- man/makeNRedMatr.Rd | 93 ++++++----- man/matchNamesWithReverseParts.Rd |only man/matr2list.Rd | 62 +++---- man/mergeSelCol.Rd | 100 ++++++------ man/mergeSelCol3.Rd | 114 +++++++------ man/mergeW2.Rd | 134 ++++++++-------- man/minDiff.Rd | 71 ++++---- man/moderTest2grp.Rd | 100 ++++++------ man/moderTestXgrp.Rd | 104 ++++++------ man/nFragments.Rd | 58 +++---- man/nFragments0.Rd | 52 +++--- man/nNonNumChar.Rd | 48 ++--- man/naOmit.Rd | 52 +++--- man/nonAmbiguousMat.Rd | 80 +++++---- man/nonAmbiguousNum.Rd | 77 +++++---- man/nonRedundLines.Rd | 54 +++--- man/nonredDataFrame.Rd | 72 ++++---- man/normalizeThis.Rd | 132 ++++++++-------- man/organizeAsListOfRepl.Rd | 71 ++++---- man/pVal2lfdr.Rd | 70 ++++---- man/partUnlist.Rd | 56 +++--- man/partialDist.Rd | 82 +++++----- man/pasteC.Rd | 70 ++++---- man/presenceFilt.Rd | 85 +++++----- man/randIndFx.Rd | 79 ++++----- man/rankToContigTab.Rd |only man/ratioAllComb.Rd | 60 +++---- man/ratioToPpm.Rd | 69 ++++---- man/readCsvBatch.Rd | 120 +++++++------- man/readVarColumns.Rd |only man/readXlsxBatch.Rd | 123 ++++++++------- man/reduceTable.Rd | 66 ++++---- man/regrBy1or2point.Rd | 79 +++++---- man/regrMultBy1or2point.Rd | 83 +++++----- man/renameColumns.Rd | 64 +++---- man/replNAbyLow.Rd | 113 +++++++------ man/replPlateCV.Rd | 66 ++++---- man/rmDupl2colMatr.Rd | 56 +++--- man/rowCVs.Rd | 54 +++--- man/rowGrpCV.Rd | 62 +++---- man/rowGrpMeans.Rd | 54 +++--- man/rowGrpSds.Rd | 54 +++--- man/rowMedSds.Rd | 54 +++--- man/rowSEMs.Rd | 52 +++--- man/rowSds.Rd | 52 +++--- man/searchDataPairs.Rd | 93 ++++++----- man/searchLinesAtGivenSlope.Rd | 116 +++++++------- man/simpleFragFig.Rd | 93 ++++++----- man/singleLineAnova.Rd | 62 +++---- man/sortBy2CategorAnd1IntCol.Rd | 83 +++++----- man/stableMode.Rd | 78 +++++---- man/stdErrMedBoot.Rd | 56 +++--- man/summarizeCols.Rd | 76 ++++----- man/tTestAllVal.Rd | 64 +++---- man/tableToPlot.Rd | 111 +++++++------ man/test2factLimma.Rd | 116 +++++++------- man/transpGraySca.Rd |only man/treatTxtDuplicates.Rd | 80 +++++---- man/triCoord.Rd | 50 +++--- man/uniqCountReport.Rd | 101 ++++++------ man/upperMaCoord.Rd | 48 ++--- man/withinRefRange.Rd | 62 +++---- man/writeCsv.Rd | 141 +++++++++-------- vignettes |only 165 files changed, 5305 insertions(+), 4863 deletions(-)
Title: PARAFAC Analysis of EEMs from DOM
Description: This is a user-friendly way to run a parallel factor (PARAFAC) analysis (Harshman, 1971) <doi:10.1121/1.1977523> on excitation emission matrix (EEM) data from dissolved organic matter (DOM) samples (Murphy et al., 2013) <doi:10.1039/c3ay41160e>. The analysis includes profound methods for model validation. Some additional functions allow the calculation of absorbance slope parameters and create beautiful plots.
Author: Matthias Pucher [aut, cre],
Daniel Graeber [aut, ctb],
Stefan Preiner [ctb],
Renata Pinto [ctb]
Maintainer: Matthias Pucher <matthias.pucher@wcl.ac.at>
Diff between staRdom versions 1.1.10 dated 2020-04-02 and 1.1.11 dated 2020-04-23
DESCRIPTION | 8 +- MD5 | 24 ++++---- R/correction_functions.R | 4 - R/parafac_plot_functions.R | 76 ++++++++++++++++++---------- R/plot_functions.R | 50 +++++++++++------- README | 3 + inst/doc/Basic_analysis_of_DOM_samples.html | 2 inst/doc/PARAFAC_analysis_of_EEM.html | 30 +++++------ man/eem_dilution.Rd | 4 - man/eempf_compare.Rd | 2 man/eempf_plot_comps.Rd | 16 +++++ man/eempf_residuals_plot.Rd | 22 +++++++- man/ggeem.Rd | 21 +++++++ 13 files changed, 176 insertions(+), 86 deletions(-)
Title: Calculating Spatial Risk
Description: Methods for spatial risk calculations. It offers an efficient approach to determine the sum of all observations within a
circle of a certain radius. This might be beneficial for insurers who are required (by a recent European Commission regulation) to determine
the maximum value of insured fire risk policies of all buildings that are partly or fully located within a circle of a radius of 200m.
Author: Martin Haringa [aut, cre]
Maintainer: Martin Haringa <mtharinga@gmail.com>
Diff between spatialrisk versions 0.6.6 dated 2020-03-21 and 0.6.7 dated 2020-04-23
DESCRIPTION | 17 ++++++--- MD5 | 63 ++++++++++++++++++----------------- NEWS.md | 31 ++++++++++------- R/Groningen.R | 2 - R/choropleth.R | 49 +++++++++++++++------------ R/concentration.R | 55 ++++++++++++++++++++---------- R/haversine.R | 21 ++++++++--- R/kriging.R | 12 ++++++ R/map_ggplot2.R | 30 +++++++++------- R/nl_gemeente.R | 36 ++++++++++---------- R/points_in_circle.R | 25 +++++++++---- R/points_to_polygon.R | 10 ++--- R/smooth_sphere.R | 4 ++ data/Groningen.rda |binary man/Groningen.Rd | 2 - man/choropleth.Rd | 2 + man/concentration.Rd | 38 +++++++++++---------- man/europe_countries.Rd | 4 +- man/figures |only man/nl_corop.Rd | 4 +- man/nl_gemeente.Rd | 4 +- man/nl_postcode1.Rd | 4 +- man/nl_postcode2.Rd | 4 +- man/nl_postcode3.Rd | 4 +- man/nl_postcode4.Rd | 4 +- man/nl_provincie.Rd | 4 +- man/points_in_circle.Rd | 16 ++++---- man/points_to_polygon.Rd | 4 +- man/world_countries.Rd | 4 +- src/haversine_cpp.cpp | 25 ++++++++----- tests/testthat/test_concentration.R | 11 +++--- tests/testthat/test_haversine.R |only tests/testthat/test_pointsincircle.R | 2 - 33 files changed, 291 insertions(+), 200 deletions(-)
Title: Download DBnomics Data
Description: R access to hundreds of millions data series from DBnomics API
(<https://db.nomics.world/>).
Author: Sebastien Galais [cre, ctb],
Thomas Brand [aut]
Maintainer: Sebastien Galais <s915.stem@gmail.com>
Diff between rdbnomics versions 0.6.0 dated 2020-04-18 and 0.6.1 dated 2020-04-23
DESCRIPTION | 6 +- MD5 | 18 ++++---- NEWS.md | 4 + R/rdb_series.R | 42 +++++++++++++++++++- README.md | 8 +++ inst/doc/rdbnomics.R | 12 ++++- inst/doc/rdbnomics.Rmd | 20 +++++++-- inst/doc/rdbnomics.html | 98 ++++++++++++++++++++++++------------------------ man/rdb_series.Rd | 18 ++++++++ vignettes/rdbnomics.Rmd | 20 +++++++-- 10 files changed, 173 insertions(+), 73 deletions(-)
Title: Analysis of Heavy Tailed Distributions
Description: An implementation of maximum likelihood estimators
for a variety of heavy tailed distributions, including both the
discrete and continuous power law distributions. Additionally, a
goodness-of-fit based approach is used to estimate the lower cut-off
for the scaling region.
Author: Colin Gillespie [aut, cre] (<https://orcid.org/0000-0003-1787-0275>)
Maintainer: Colin Gillespie <csgillespie@gmail.com>
Diff between poweRlaw versions 0.70.4 dated 2020-04-07 and 0.70.5 dated 2020-04-23
poweRlaw-0.70.4/poweRlaw/man/plot-distribution-ANY-method.Rd |only poweRlaw-0.70.4/poweRlaw/vignettes/plfit.R |only poweRlaw-0.70.5/poweRlaw/DESCRIPTION | 10 poweRlaw-0.70.5/poweRlaw/MD5 | 147 ++++------ poweRlaw-0.70.5/poweRlaw/NAMESPACE | 2 poweRlaw-0.70.5/poweRlaw/NEWS.md | 6 poweRlaw-0.70.5/poweRlaw/R/aaa_all_classes.R | 8 poweRlaw-0.70.5/poweRlaw/R/all_generics.R | 92 +++--- poweRlaw-0.70.5/poweRlaw/R/bootstrap.R | 34 +- poweRlaw-0.70.5/poweRlaw/R/bootstrap_p.R | 60 ++-- poweRlaw-0.70.5/poweRlaw/R/checks.R | 8 poweRlaw-0.70.5/poweRlaw/R/compare_distributions.R | 72 ++-- poweRlaw-0.70.5/poweRlaw/R/conlnorm.R | 44 +- poweRlaw-0.70.5/poweRlaw/R/data_help_files.R | 74 ++--- poweRlaw-0.70.5/poweRlaw/R/def_conexp.R | 38 +- poweRlaw-0.70.5/poweRlaw/R/def_conpl.R | 36 +- poweRlaw-0.70.5/poweRlaw/R/def_conweibull.R | 46 +-- poweRlaw-0.70.5/poweRlaw/R/def_disexp.R | 46 +-- poweRlaw-0.70.5/poweRlaw/R/def_dislnorm.R | 66 ++-- poweRlaw-0.70.5/poweRlaw/R/def_displ.R | 84 ++--- poweRlaw-0.70.5/poweRlaw/R/def_dispois.R | 36 +- poweRlaw-0.70.5/poweRlaw/R/def_template.R | 2 poweRlaw-0.70.5/poweRlaw/R/dist_data_cdf_methods.R | 2 poweRlaw-0.70.5/poweRlaw/R/estimate_pars.R | 10 poweRlaw-0.70.5/poweRlaw/R/estimate_xmin.R | 112 +++---- poweRlaw-0.70.5/poweRlaw/R/get_n.R | 4 poweRlaw-0.70.5/poweRlaw/R/get_ntail.R | 6 poweRlaw-0.70.5/poweRlaw/R/lines_methods.R | 24 - poweRlaw-0.70.5/poweRlaw/R/plcon.R | 6 poweRlaw-0.70.5/poweRlaw/R/pldis.R | 70 ++-- poweRlaw-0.70.5/poweRlaw/R/plot_methods.R | 66 ++-- poweRlaw-0.70.5/poweRlaw/R/points_methods.R | 8 poweRlaw-0.70.5/poweRlaw/R/powerlaw-package.R | 16 - poweRlaw-0.70.5/poweRlaw/R/show_methods.R | 8 poweRlaw-0.70.5/poweRlaw/R/timer.R | 4 poweRlaw-0.70.5/poweRlaw/inst/doc/a_introduction.R | 51 +-- poweRlaw-0.70.5/poweRlaw/inst/doc/a_introduction.Rnw | 48 --- poweRlaw-0.70.5/poweRlaw/inst/doc/a_introduction.pdf |binary poweRlaw-0.70.5/poweRlaw/inst/doc/b_powerlaw_examples.pdf |binary poweRlaw-0.70.5/poweRlaw/inst/doc/c_comparing_distributions.pdf |binary poweRlaw-0.70.5/poweRlaw/inst/doc/d_jss_paper.pdf |binary poweRlaw-0.70.5/poweRlaw/man/bootstrap_moby.Rd | 26 - poweRlaw-0.70.5/poweRlaw/man/compare_distributions.Rd | 44 +- poweRlaw-0.70.5/poweRlaw/man/displ.Rd | 18 - poweRlaw-0.70.5/poweRlaw/man/dist_cdf-methods.Rd | 18 - poweRlaw-0.70.5/poweRlaw/man/dist_data_cdf-methods.Rd | 6 poweRlaw-0.70.5/poweRlaw/man/dist_ll-methods.Rd | 4 poweRlaw-0.70.5/poweRlaw/man/dist_pdf-methods.Rd | 8 poweRlaw-0.70.5/poweRlaw/man/dist_rand-methods.Rd | 6 poweRlaw-0.70.5/poweRlaw/man/dplcon.Rd | 12 poweRlaw-0.70.5/poweRlaw/man/dpldis.Rd | 40 +- poweRlaw-0.70.5/poweRlaw/man/estimate_pars.Rd | 4 poweRlaw-0.70.5/poweRlaw/man/estimate_xmin.Rd | 46 +-- poweRlaw-0.70.5/poweRlaw/man/get_KS_statistic-deprecated.Rd | 8 poweRlaw-0.70.5/poweRlaw/man/get_n.Rd | 2 poweRlaw-0.70.5/poweRlaw/man/get_ntail.Rd | 4 poweRlaw-0.70.5/poweRlaw/man/moby.Rd | 12 poweRlaw-0.70.5/poweRlaw/man/native_american.Rd | 14 poweRlaw-0.70.5/poweRlaw/man/plot-distribution-method.Rd |only poweRlaw-0.70.5/poweRlaw/man/plot.bs_xmin.Rd | 4 poweRlaw-0.70.5/poweRlaw/man/population.Rd | 8 poweRlaw-0.70.5/poweRlaw/man/poweRlaw-package.Rd | 8 poweRlaw-0.70.5/poweRlaw/man/show-distribution-method.Rd | 4 poweRlaw-0.70.5/poweRlaw/man/swiss_prot.Rd | 18 - poweRlaw-0.70.5/poweRlaw/tests/testthat/test_bootstrap.R | 14 poweRlaw-0.70.5/poweRlaw/tests/testthat/test_bootstrap_p.R | 13 poweRlaw-0.70.5/poweRlaw/tests/testthat/test_checks.R | 2 poweRlaw-0.70.5/poweRlaw/tests/testthat/test_compare_distributions.R | 16 - poweRlaw-0.70.5/poweRlaw/tests/testthat/test_dist_cdf.R | 66 ++-- poweRlaw-0.70.5/poweRlaw/tests/testthat/test_dist_data_cdf.R | 19 - poweRlaw-0.70.5/poweRlaw/tests/testthat/test_dist_ll.R | 43 +- poweRlaw-0.70.5/poweRlaw/tests/testthat/test_estimate_pars.R | 20 - poweRlaw-0.70.5/poweRlaw/tests/testthat/test_estimate_xmin.R | 27 - poweRlaw-0.70.5/poweRlaw/tests/testthat/test_get_sims.R | 14 poweRlaw-0.70.5/poweRlaw/tests/testthat/test_plot.R | 32 +- poweRlaw-0.70.5/poweRlaw/vignettes/a_introduction.Rnw | 48 --- 76 files changed, 957 insertions(+), 1017 deletions(-)
Title: Measuring Multivariate Dependence Using Distance Multivariance
Description: Distance multivariance is a measure of dependence which can be used to detect
and quantify dependence of arbitrarily many random vectors. The necessary functions are
implemented in this packages and examples are given. It includes: distance multivariance,
distance multicorrelation, dependence structure detection, tests of independence and
copula versions of distance multivariance based on the Monte Carlo empirical transform.
Detailed references are given in the package description, as starting point for the
theoretic background we refer to:
B. Böttcher, Dependence and Dependence Structures: Estimation and Visualization Using
the Unifying Concept of Distance Multivariance. Open Statistics, Vol. 1, No. 1 (2020),
<doi:10.1515/stat-2020-0001>.
Author: Björn Böttcher [aut, cre],
Martin Keller-Ressel [ctb]
Maintainer: Björn Böttcher <bjoern.boettcher@tu-dresden.de>
Diff between multivariance versions 2.2.0 dated 2019-06-18 and 2.3.0 dated 2020-04-23
DESCRIPTION | 25 MD5 | 113 +-- NAMESPACE | 4 R/RcppExports.R | 23 R/multivariance-functions.R | 787 ++++++++++++++++++--- data/anscombe-extended.rda |only inst/NEWS | 20 inst/REFERENCES.bib |only inst/examples/dependence-structures.R | 10 man/anscombe.extended.Rd |only man/cdm.Rd | 104 +- man/cdm.mu.bcd.Rd | 37 man/cdms.Rd | 46 - man/cdms.mu.bcd.Rd | 60 - man/clean.graph.Rd | 98 +- man/coins.Rd | 60 - man/copula.multicorrelation.Rd |only man/copula.multicorrelation.test.Rd |only man/copula.multivariance.Rd |only man/dep_struct_iterated_13_100.Rd | 50 - man/dep_struct_ring_15_100.Rd | 60 - man/dep_struct_several_26_100.Rd | 48 - man/dep_struct_star_9_100.Rd | 48 - man/dependence.structure.Rd | 310 ++++---- man/dependence.structure.full.Rd | 47 - man/dm.Rd |only man/dms.Rd |only man/doubleCenterBiasCorrected.Rd |only man/doubleCenterBiasCorrectedUpper.Rd |only man/doubleCenterBiasCorrectedUpperLower.Rd |only man/emp.transf.Rd |only man/emp.transf.dep.Rd |only man/emp.transf.vec.Rd |only man/fastEuclideanCdm.Rd | 32 man/find.cluster.Rd | 133 +-- man/independence.test.Rd | 102 +- man/is.doubly.centered.Rd |only man/layout_on_circles.Rd | 56 - man/lower.order.Rd | 28 man/m.multivariance.Rd | 137 +-- man/match.rows.Rd | 44 - man/moments.for.pearson.Rd | 42 - man/multicorrelation.Rd | 142 ++- man/multicorrelation.bias.corrected.Rd |only man/multivariance-package.Rd | 159 ++-- man/multivariance.Rd | 122 +-- man/multivariance.pvalue.Rd | 44 - man/multivariance.test.Rd | 154 ++-- man/multivariance.timing.Rd | 93 +- man/multivariances.all.Rd | 84 +- man/p.value.to.star.label.Rd |only man/pairwise.multicorrelation.bias.corrected.Rd |only man/pearson.pvalue.Rd | 52 - man/pearson.pvalue.unif.Rd |only man/pearson.qf.Rd | 52 - man/rejection.level.Rd | 68 - man/resample.multivariance.Rd | 98 +- man/resample.pvalue.Rd | 62 - man/resample.rejection.level.Rd | 48 - man/sample.cdms.Rd | 42 - man/sample.cols.Rd | 54 - man/signed.sqrt.Rd |only man/tetrahedron.Rd | 48 - man/total.multicorrelation.bias.corrected.upper.Rd |only man/total.multivariance.Rd | 111 +- src/RcppExports.cpp | 37 src/multivariance.cpp | 127 +++ tests/testthat/testmultivariances.R | 68 + 68 files changed, 2636 insertions(+), 1553 deletions(-)
Title: Genetic Analysis of Multi-Parent Recombinant Inbred Lines
Description: Constructing linkage maps, reconstructing haplotypes,
estimating linkage disequilibrium and quantitative trait loci
(QTL) mapping in multi-parent Recombinant Inbred Lines designs.
Author: Rohan Shah [aut, cre],
Emma Huang [aut],
Matthew Morell [ctb],
Alex Whan [ctb],
Colin Cavanagh [ctb]
Maintainer: Rohan Shah <cran@bookshah.com>
Diff between mpMap2 versions 1.0.2 dated 2020-04-07 and 1.0.3 dated 2020-04-23
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- inst/doc/mpMap2.pdf |binary src/arsa.cpp | 6 +++--- src/impute.cpp | 10 +++++----- tests/testthat.R | 2 +- 6 files changed, 18 insertions(+), 18 deletions(-)
Title: Implementation of the minMSE Treatment Assignment Method for One
or Multiple Treatment Groups
Description: Performs treatment assignment for (field) experiments considering available, possibly multivariate and continuous, information (covariates, observable characteristics), that is: forms balanced treatment groups, according to the minMSE-method as proposed by Schneider and Schlather (2017) <DOI:10419/161931>.
Author: Sebastian O. Schneider, Giulia Baldini
Maintainer: Sebastian O. Schneider <sschneider@coll.mpg.de>
Diff between minMSE versions 0.1.1 dated 2019-12-02 and 0.3.1 dated 2020-04-23
minMSE-0.1.1/minMSE/man/assignMinMSETreatment.Rd |only minMSE-0.3.1/minMSE/DESCRIPTION | 11 minMSE-0.3.1/minMSE/MD5 | 22 - minMSE-0.3.1/minMSE/NAMESPACE | 2 minMSE-0.3.1/minMSE/R/MinMSET.R | 387 +++++++++++------- minMSE-0.3.1/minMSE/README.md | 50 +- minMSE-0.3.1/minMSE/man/assign_minMSE_treatment.Rd |only minMSE-0.3.1/minMSE/man/assign_treatment.Rd | 21 minMSE-0.3.1/minMSE/man/evaluate_solution.Rd | 13 minMSE-0.3.1/minMSE/man/evaluate_solution.optim.Rd | 9 minMSE-0.3.1/minMSE/man/gcd.Rd |only minMSE-0.3.1/minMSE/man/sample_with_prev_treatment.Rd | 6 minMSE-0.3.1/minMSE/man/swap_treatment.optim.Rd | 4 minMSE-0.3.1/minMSE/man/vector_gcd.Rd |only 14 files changed, 314 insertions(+), 211 deletions(-)
Title: Airborne LiDAR Data Manipulation and Visualization for Forestry
Applications
Description: Airborne LiDAR (Light Detection and Ranging) interface for data
manipulation and visualization. Read/write 'las' and 'laz' files, computation
of metrics in area based approach, point filtering, artificial point reduction,
classification from geographic data, normalization, individual tree segmentation
and other manipulations.
Author: Jean-Romain Roussel [aut, cre, cph],
David Auty [aut, ctb] (Reviews the documentation),
Florian De Boissieu [ctb] (Fixed bugs and improved catalog features),
Andrew Sánchez Meador [ctb] (Implemented wing2015 for lassnags),
Bourdon Jean-François [ctb] (Implemented sensor_tracking)
Maintainer: Jean-Romain Roussel <jean-romain.roussel.1@ulaval.ca>
Diff between lidR versions 2.2.3 dated 2020-03-02 and 2.2.4 dated 2020-04-23
DESCRIPTION | 12 MD5 | 76 +- NAMESPACE | 4 NEWS.md | 341 +------------ R/RcppExports.R | 4 R/catalog_intersect.r | 6 R/catalog_makecluster.r | 17 R/grid_metrics.r | 7 R/io_readLAScatalog.r | 2 R/lascheck.r | 77 ++ R/lasclip.r | 6 R/lasmergespatial.r | 2 R/lasrangecorrection.R | 2 R/methods-LAS.r | 2 R/plot.r | 2 R/projection.r | 164 ++++-- R/sensor_tracking.R | 15 R/utils_catalog_options.r | 1 R/utils_raster.r | 5 build/vignette.rds |binary inst/doc/lidR-LAS-class.html | 46 - inst/doc/lidR-LAScatalog-class.html | 8 inst/doc/lidR-catalog-apply-examples.html | 8 inst/doc/lidR-computation-speed-LAScatalog.html | 10 man/projection.Rd | 14 man/stdmetrics.Rd | 18 src/LAS.cpp | 13 src/RcppExports.cpp | 12 src/RcppFunction.cpp | 42 + tests/testthat/Rplots.pdf |binary tests/testthat/test-LAS.R | 4 tests/testthat/test-catalog_apply-automerge.R | 2 tests/testthat/test-grid_canopy.R | 6 tests/testthat/test-grid_metrics.R | 31 + tests/testthat/test-lascheck.R | 35 + tests/testthat/test-projection.R | 68 ++ tests/testthat/test-sensor_tracking.R | 2 vignettes/lidR-LAScatalog-engine.R | 20 vignettes/lidR-LAScatalog-engine.html | 618 ++++++++++++------------ 39 files changed, 898 insertions(+), 804 deletions(-)
More information about JuliaConnectoR at CRAN
Permanent link
Title: General Equilibrium Modeling
Description: Some tools for developing general equilibrium models and some general equilibrium models. These models can be used for teaching economic theory and are built by the methods of new structural economics (see <https://www.nse.pku.edu.cn/> and LI Wu, 2019, General Equilibrium and Structural Dynamics: Perspectives of New Structural Economics. Beijing: Economic Science Press).
Author: LI Wu <liwu@staff.shu.edu.cn>
Maintainer: LI Wu <liwu@staff.shu.edu.cn>
Diff between GE versions 0.0.5 dated 2020-04-18 and 0.0.7 dated 2020-04-23
DESCRIPTION | 6 +-- MD5 | 37 +++++++++++++---------- NAMESPACE | 1 R/SCES_A.R | 9 +++-- R/demand_coefficient.R | 57 ++++++++++++++++++++++++------------ R/ge_tidy.R | 4 +- R/gemInputOutputTable_2_8_4.R |only R/gemInputOutputTable_5_4.R | 40 ++++++++++++------------- R/gemInputOutputTable_7_4.R | 43 +++++++++++++-------------- R/gemInputOutputTable_easy_5_4.R | 30 +++++++++--------- R/iterate.R | 2 - R/rate_to_beta.R |only man/SCES_A.Rd | 7 +++- man/beta_to_rate.Rd |only man/demand_coefficient.Rd | 27 ++++++++++++----- man/ge_tidy.Rd | 4 +- man/gemInputOutputTable_2_8_4.Rd |only man/gemInputOutputTable_5_4.Rd | 28 ++++++++--------- man/gemInputOutputTable_7_4.Rd | 25 +++++++-------- man/gemInputOutputTable_easy_5_4.Rd | 16 +++++----- man/iterate.Rd | 2 - man/rate_to_beta.Rd |only 22 files changed, 189 insertions(+), 149 deletions(-)
Title: Fractional Factorial Designs with 2-Level Factors
Description: Regular and non-regular Fractional Factorial 2-level designs
can be created. Furthermore, analysis tools for Fractional
Factorial designs with 2-level factors are offered (main
effects and interaction plots for all factors simultaneously,
cube plot for looking at the simultaneous effects of three
factors, full or half normal plot, alias structure in a more
readable format than with the built-in function alias).
Author: Ulrike Groemping
Maintainer: Ulrike Groemping <groemping@beuth-hochschule.de>
Diff between FrF2 versions 2.1-1 dated 2020-03-09 and 2.2 dated 2020-04-23
DESCRIPTION | 8 - MD5 | 48 +++++----- NAMESPACE | 2 R/CatalogueAccessors.R | 3 R/FF_from_X.R | 29 +++++- R/FrF2.R | 165 ++++++++++++++++++++++-------------- R/add.center.r | 21 +++- R/blockpick.R | 39 +++++--- R/blocksplitplot.aliases.shortrep.R | 13 +- R/colpick.R | 36 ++++++- R/colpickIV.R | 27 ++++- R/makecatlg.R |only R/sysdata.rda |binary inst/NEWS | 88 +++++++++++++++++++ man/CIG.Rd | 35 ++----- man/CatalogueAccessors.Rd | 18 ++- man/FrF2.Rd | 39 ++++++-- man/block.Rd | 23 +++-- man/godolphin.Rd | 15 ++- man/makecatlg.Rd |only tests/FrF2test.R | 5 - tests/FrF2test.Rout.save | 124 ++++++++++++++++++++++----- tests/addcentertest.R | 11 ++ tests/addcentertest.Rout.save | 114 ++++++++++++++++++++++++ tests/godolphintest.R | 4 tests/godolphintest.Rout.save | 26 +++++ 26 files changed, 691 insertions(+), 202 deletions(-)
Title: Test for Finiteness of Moments in a Distribution
Description: The purpose of this package is to tests whether a given
moment of the distribution of a given sample is finite or not. For
heavy-tailed distributions with tail exponent b, only moments of
order smaller than b are finite. Tail exponent and heavy-
tailedness are notoriously difficult to ascertain. But the
finiteness of moments (including fractional moments) can be tested
directly. This package does that following the test suggested by
Trapani (2016) <doi:10.1016/j.jeconom.2015.08.006>.
Author: Torsten Heinrich [aut, cre],
Julian Winkler [aut]
Maintainer: Torsten Heinrich <torsten.heinrich@posteo.net>
Diff between finity versions 0.1.4 dated 2020-04-17 and 0.1.4.1 dated 2020-04-23
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- build/partial.rdb |binary src/finite_moment_test.cpp | 8 ++++++-- 4 files changed, 13 insertions(+), 9 deletions(-)
Title: Fractional Hot Deck and Fully Efficient Fractional Imputation
Description: Impute general multivariate missing data with the fractional hot deck imputation based on Jaekwang Kim (2011) <doi:10.1093/biomet/asq073>.
Author: Inho Cho [aut, cre],
Jaekwang Kim [aut],
Jongho Im [aut],
Yicheng Yang [aut]
Maintainer: Inho Cho <icho@iastate.edu>
Diff between FHDI versions 1.3.2 dated 2019-06-11 and 1.4.0 dated 2020-04-23
DESCRIPTION | 23 MD5 | 18 R/FHDI_CellMake.R | 31 R/FHDI_CellProb.R | 5 R/FHDI_Driver.R | 42 man/FHDI-package.Rd | 11 man/FHDI_CellMake.Rd | 21 man/FHDI_CellProb.Rd | 11 man/FHDI_Driver.Rd | 23 src/FHDI.cc | 9573 ++++++++++++++++++++++++++++++++++++++++++++++++++- 10 files changed, 9592 insertions(+), 166 deletions(-)
Title: Fundamental Clustering Problems Suite
Description: Many conventional clustering algorithms are provided in this package with consistent input and output, which enables the user to try out algorithms swiftly. Additionally, 26 statistical approaches for the estimation of the number of clusters as well as the the mirrored density plot (MD-plot) of clusterability are implemented. Moreover, the fundamental clustering problems suite (FCPS) offers a variety of clustering challenges any algorithm should handle when facing real world data, see Thrun, M.C., Ultsch A.: "Clustering Benchmark Datasets Exploiting the Fundamental Clustering Problems" (2020), Data in Brief, <DOI:10.1016/j.dib.2020.105501>.
Author: Michael Thrun [aut, cre, cph] (<https://orcid.org/0000-0001-9542-5543>),
Peter Nahrgang [ctr, ctb],
Felix Pape [ctr, ctb],
Vasyl Pihur [ctb],
Guy Brock [ctb],
Susmita Datta [ctb],
Somnath Datta [ctb],
Luis Winckelmann [com],
Alfred Ultsch [dtc, ctb]
Maintainer: Michael Thrun <m.thrun@gmx.net>
Diff between FCPS versions 1.1.0 dated 2020-03-13 and 1.2.0 dated 2020-04-23
FCPS-1.1.0/FCPS/R/ClusteringAccuracy.R |only FCPS-1.1.0/FCPS/R/Clusternumbers.R |only FCPS-1.1.0/FCPS/R/GenerateFundamentalClusteringProblem.R |only FCPS-1.1.0/FCPS/R/GraphBasedClustering.R |only FCPS-1.1.0/FCPS/R/InterClusterDistances.R |only FCPS-1.1.0/FCPS/R/MinSpanTree.R |only FCPS-1.1.0/FCPS/man/ClusteringAccuracy.Rd |only FCPS-1.1.0/FCPS/man/Clusternumbers.Rd |only FCPS-1.1.0/FCPS/man/GenerateFundamentalClusteringProblem.Rd |only FCPS-1.1.0/FCPS/man/GraphBasedClustering.Rd |only FCPS-1.1.0/FCPS/man/InterClusterDistances.Rd |only FCPS-1.1.0/FCPS/man/MinSpanTree.Rd |only FCPS-1.2.0/FCPS/DESCRIPTION | 37 + FCPS-1.2.0/FCPS/MD5 | 163 ++++--- FCPS-1.2.0/FCPS/NAMESPACE | 38 - FCPS-1.2.0/FCPS/R/ADPclustering.R | 5 FCPS-1.2.0/FCPS/R/APclustering.R | 6 FCPS-1.2.0/FCPS/R/AgglomerativeNestingClustering.R | 7 FCPS-1.2.0/FCPS/R/AutomaticProjectionBasedClustering.R |only FCPS-1.2.0/FCPS/R/ClusterAccuracy.R |only FCPS-1.2.0/FCPS/R/ClusterApply.R |only FCPS-1.2.0/FCPS/R/ClusterChallenge.R |only FCPS-1.2.0/FCPS/R/ClusterCount.R |only FCPS-1.2.0/FCPS/R/ClusterDistances.R | 44 +- FCPS-1.2.0/FCPS/R/ClusterInterDistances.R |only FCPS-1.2.0/FCPS/R/ClusterNoEstimation.R |only FCPS-1.2.0/FCPS/R/ClusterPlotMDS.R |only FCPS-1.2.0/FCPS/R/ClusterRename.R |only FCPS-1.2.0/FCPS/R/ClusterRenameDescendingSize.R |only FCPS-1.2.0/FCPS/R/ClusterabilityMDplot.R | 149 +++++-- FCPS-1.2.0/FCPS/R/DBscan.R | 9 FCPS-1.2.0/FCPS/R/DatabionicSwarmClustering.R | 6 FCPS-1.2.0/FCPS/R/DensityPeakClustering.R | 11 FCPS-1.2.0/FCPS/R/DivisiveAnalysisClustering.R | 8 FCPS-1.2.0/FCPS/R/FannyClustering.R | 7 FCPS-1.2.0/FCPS/R/GenieClustering.R | 4 FCPS-1.2.0/FCPS/R/HCLclustering.R | 7 FCPS-1.2.0/FCPS/R/HierarchicalClusterData.R | 1 FCPS-1.2.0/FCPS/R/HierarchicalClusterDists.R | 3 FCPS-1.2.0/FCPS/R/Hierarchical_DBSCAN.R | 5 FCPS-1.2.0/FCPS/R/LargeApplicationClustering.R | 4 FCPS-1.2.0/FCPS/R/MSTclustering.R |only FCPS-1.2.0/FCPS/R/MarkovClustering.R | 4 FCPS-1.2.0/FCPS/R/MinimalEnergyClustering.R | 4 FCPS-1.2.0/FCPS/R/MinimaxLinkageClustering.R | 4 FCPS-1.2.0/FCPS/R/MoGclustering.R | 4 FCPS-1.2.0/FCPS/R/ModelBasedClustering.R | 10 FCPS-1.2.0/FCPS/R/NeuralGasClustering.R | 7 FCPS-1.2.0/FCPS/R/OPTICSclustering.R | 10 FCPS-1.2.0/FCPS/R/PAMclustering.R | 7 FCPS-1.2.0/FCPS/R/ProjectionPursuitClustering.R |only FCPS-1.2.0/FCPS/R/QTclustering.R | 6 FCPS-1.2.0/FCPS/R/RobustTrimmedClustering.R | 8 FCPS-1.2.0/FCPS/R/SOMclustering.R | 4 FCPS-1.2.0/FCPS/R/SOTAclustering.R |only FCPS-1.2.0/FCPS/R/SharedNearestNeighborClustering.R | 9 FCPS-1.2.0/FCPS/R/SpectralClustering.R | 4 FCPS-1.2.0/FCPS/R/Spectrum.R | 5 FCPS-1.2.0/FCPS/R/SubspaceClustering.R | 5 FCPS-1.2.0/FCPS/R/TandemClustering.R |only FCPS-1.2.0/FCPS/R/kmeansClustering.R | 106 +++-- FCPS-1.2.0/FCPS/R/kmeansDist.R |only FCPS-1.2.0/FCPS/R/pdfClustering.R | 4 FCPS-1.2.0/FCPS/build |only FCPS-1.2.0/FCPS/man/Atom.Rd | 6 FCPS-1.2.0/FCPS/man/AutomaticProjectionBasedClustering.Rd |only FCPS-1.2.0/FCPS/man/Chainlink.Rd | 4 FCPS-1.2.0/FCPS/man/ClusterAccuracy.Rd |only FCPS-1.2.0/FCPS/man/ClusterApply.Rd |only FCPS-1.2.0/FCPS/man/ClusterChallenge.Rd |only FCPS-1.2.0/FCPS/man/ClusterCount.Rd |only FCPS-1.2.0/FCPS/man/ClusterDistances.Rd | 13 FCPS-1.2.0/FCPS/man/ClusterInterDistances.Rd |only FCPS-1.2.0/FCPS/man/ClusterNoEstimation.Rd |only FCPS-1.2.0/FCPS/man/ClusterPlotMDS.Rd |only FCPS-1.2.0/FCPS/man/ClusterRename.Rd |only FCPS-1.2.0/FCPS/man/ClusterRenameDescendingSize.Rd |only FCPS-1.2.0/FCPS/man/ClusterabilityMDplot.Rd | 18 FCPS-1.2.0/FCPS/man/DBscan.Rd | 6 FCPS-1.2.0/FCPS/man/DatabionicSwarmClustering.Rd | 254 ++++++------ FCPS-1.2.0/FCPS/man/EngyTime.Rd | 5 FCPS-1.2.0/FCPS/man/FCPS-package.Rd | 29 - FCPS-1.2.0/FCPS/man/GolfBall.Rd | 5 FCPS-1.2.0/FCPS/man/HCLclustering.Rd | 2 FCPS-1.2.0/FCPS/man/Hepta.Rd | 4 FCPS-1.2.0/FCPS/man/Leukemia.Rd | 3 FCPS-1.2.0/FCPS/man/Lsun3D.Rd | 4 FCPS-1.2.0/FCPS/man/MSTclustering.Rd |only FCPS-1.2.0/FCPS/man/MoGclustering.Rd | 6 FCPS-1.2.0/FCPS/man/OPTICSclustering.Rd | 8 FCPS-1.2.0/FCPS/man/ProjectionPursuitClustering.Rd |only FCPS-1.2.0/FCPS/man/QTclustering.Rd | 4 FCPS-1.2.0/FCPS/man/RobustTrimmedClustering.Rd | 19 FCPS-1.2.0/FCPS/man/SOTAclustering.Rd |only FCPS-1.2.0/FCPS/man/SharedNearestNeighborClustering.Rd | 6 FCPS-1.2.0/FCPS/man/SpectralClustering.Rd | 6 FCPS-1.2.0/FCPS/man/SubspaceClustering.Rd | 5 FCPS-1.2.0/FCPS/man/TandemClustering.Rd |only FCPS-1.2.0/FCPS/man/Target.Rd | 4 FCPS-1.2.0/FCPS/man/Tetra.Rd | 4 FCPS-1.2.0/FCPS/man/TwoDiamonds.Rd | 4 FCPS-1.2.0/FCPS/man/WingNut.Rd | 4 FCPS-1.2.0/FCPS/man/kmeansClustering.Rd | 40 + FCPS-1.2.0/FCPS/man/kmeansDist.Rd |only 104 files changed, 691 insertions(+), 487 deletions(-)
Title: Execution of Multiple Clustering Algorithm
Description: The design of this package allows us to run different clustering packages and compare the results between them, to determine which algorithm behaves best from the data provided.
Author: Luis Alfonso Perez Martos [aut, cre]
Maintainer: Luis Alfonso Perez Martos <lapm0001@gmail.com>
Diff between Clustering versions 1.5 dated 2020-04-21 and 1.6 dated 2020-04-23
DESCRIPTION | 6 MD5 | 8 R/dataset.R | 74 +- R/external_validation.R | 34 - inst/doc/Clustering.html | 1512 +++++++++++++++++++++++------------------------ 5 files changed, 818 insertions(+), 816 deletions(-)
Title: Data Set for the 'benchmarkme' Package
Description: Crowd sourced benchmarks from running the
'benchmarkme' package.
Author: Colin Gillespie [aut, cre] (<https://orcid.org/0000-0003-1787-0275>)
Maintainer: Colin Gillespie <csgillespie@gmail.com>
Diff between benchmarkmeData versions 1.0.3 dated 2019-11-02 and 1.0.4 dated 2020-04-23
benchmarkmeData-1.0.3/benchmarkmeData/R/benchmarkmeData-package.R |only benchmarkmeData-1.0.4/benchmarkmeData/DESCRIPTION | 8 - benchmarkmeData-1.0.4/benchmarkmeData/MD5 | 52 +++++----- benchmarkmeData-1.0.4/benchmarkmeData/NEWS.md | 3 benchmarkmeData-1.0.4/benchmarkmeData/R/benchmarkme_data-package.R |only benchmarkmeData-1.0.4/benchmarkmeData/R/data_help_files.R | 4 benchmarkmeData-1.0.4/benchmarkmeData/R/datatable.R | 13 +- benchmarkmeData-1.0.4/benchmarkmeData/R/get_benchmarks.R | 6 - benchmarkmeData-1.0.4/benchmarkmeData/R/make_data_set.R | 38 ++++--- benchmarkmeData-1.0.4/benchmarkmeData/R/move_files.R | 20 +-- benchmarkmeData-1.0.4/benchmarkmeData/R/nice_palette.R | 17 +-- benchmarkmeData-1.0.4/benchmarkmeData/R/plot_past.R | 51 +++++---- benchmarkmeData-1.0.4/benchmarkmeData/R/select_results.R | 18 +-- benchmarkmeData-1.0.4/benchmarkmeData/R/shine.R | 32 +++--- benchmarkmeData-1.0.4/benchmarkmeData/R/zzz.R | 4 benchmarkmeData-1.0.4/benchmarkmeData/data/past_results.RData |binary benchmarkmeData-1.0.4/benchmarkmeData/data/past_results_v2.RData |binary benchmarkmeData-1.0.4/benchmarkmeData/inst/shinyapps_io/functions.R | 36 +++--- benchmarkmeData-1.0.4/benchmarkmeData/man/benchmarkmeData-package.Rd | 4 benchmarkmeData-1.0.4/benchmarkmeData/man/get_datatable_past.Rd | 2 benchmarkmeData-1.0.4/benchmarkmeData/man/move_files.Rd | 6 - benchmarkmeData-1.0.4/benchmarkmeData/man/past_results.Rd | 4 benchmarkmeData-1.0.4/benchmarkmeData/man/past_results_v2.Rd | 4 benchmarkmeData-1.0.4/benchmarkmeData/man/plot_past.Rd | 4 benchmarkmeData-1.0.4/benchmarkmeData/man/select_results.Rd | 7 - benchmarkmeData-1.0.4/benchmarkmeData/tests/testthat/test-datatable_past.R | 2 benchmarkmeData-1.0.4/benchmarkmeData/tests/testthat/test-get_benchmarks.R | 2 benchmarkmeData-1.0.4/benchmarkmeData/tests/testthat/test-plot_past.R | 2 28 files changed, 176 insertions(+), 163 deletions(-)
More information about benchmarkmeData at CRAN
Permanent link
Title: Text Alignment with Smith-Waterman
Description: Find similarities between texts using the Smith-Waterman algorithm. The algorithm performs local sequence alignment and determines similar regions between two strings.
The Smith-Waterman algorithm is explained in the paper: "Identification of common molecular subsequences" by T.F.Smith and M.S.Waterman (1981), available at <doi:10.1016/0022-2836(81)90087-5>.
This package implements the same logic for sequences of words and letters instead of molecular sequences.
Author: Jan Wijffels [aut, cre, cph] (Rewrite of functionalities from the
textreuse R package),
Vrije Universiteit Brussel - DIGI: Brussels Platform for Digital
Humanities [cph],
Lincoln Mullen [ctb, cph]
Maintainer: Jan Wijffels <jan.wijffels@vub.be>
Diff between text.alignment versions 0.1.0 dated 2020-03-30 and 0.1.1 dated 2020-04-23
DESCRIPTION | 8 +-- MD5 | 19 ++++---- NAMESPACE | 1 NEWS.md | 6 ++ R/smith_waterman.R | 87 +++++++++++++++++++++++++++++++++++++++++ inst/doc/textalignment.R | 14 +++--- inst/doc/textalignment.html | 44 ++++++++++---------- man/smith_waterman.Rd | 23 ++++++++-- man/smith_waterman_pairwise.Rd |only man/tokenize_letters.Rd | 2 man/tokenize_spaces_punct.Rd | 2 11 files changed, 157 insertions(+), 49 deletions(-)
More information about text.alignment at CRAN
Permanent link
Title: Dave Armstrong's Miscellaneous Functions
Description: Miscellaneous set of functions I use in my teaching either at the University of Western Ontario or the Inter-university Consortium for Political and Social Research (ICPSR) Summer Program in Quantitative Methods. Broadly, the functions help with presentation and interpretation of LMs and GLMs, but also implement some new tools like Alternating Least Squares Optimal Scaling for dependent variables, a Bayesian analog to the ALSOS algorithm. There are also tools to help understand interactions in both LMs and binary GLMs.
Author: Dave Armstrong [aut, cre]
Maintainer: Dave Armstrong <dave@quantoid.net>
Diff between DAMisc versions 1.5.3 dated 2020-03-27 and 1.5.4 dated 2020-04-23
DESCRIPTION | 10 +-- MD5 | 10 +-- NAMESPACE | 4 - R/DAMisc_functions.R | 159 +++++++++++++++++++++++++++++++++++++++++++++++++++ R/damisc-package.R | 2 man/pgumbel.Rd |only man/yeo.johnson.Rd |only 7 files changed, 172 insertions(+), 13 deletions(-)
More information about RcppBigIntAlgos at CRAN
Permanent link
Title: Clustering of Datasets
Description: Hierarchical and partitioning algorithms of blocks of variables. The partitioning algorithm includes an option called noise cluster to set aside atypical blocks of variables. The CLUSTATIS method (for quantitative blocks) (Llobell, Cariou, Vigneau, Labenne & Qannari (2020) <doi:10.1016/j.foodqual.2018.05.013>, Llobell, Vigneau & Qannari (2019) <doi:10.1016/j.foodqual.2019.02.017>) and the CLUSCATA method (for Check-All-That-Apply data) (Llobell, Cariou, Vigneau, Labenne & Qannari (2019) <doi:10.1016/j.foodqual.2018.09.006>, Llobell, Giacalone, Labenne & Qannari (2019) <doi:10.1016/j.foodqual.2019.05.017>) are the core of this package.
Author: Fabien Llobell [aut, cre] (Oniris/XLSTAT),
Evelyne Vigneau [ctb] (Oniris),
Veronique Cariou [ctb] (Oniris),
El Mostafa Qannari [ctb] (Oniris)
Maintainer: Fabien Llobell <fabien.llobell@oniris-nantes.fr>
Diff between ClustBlock versions 2.1.1 dated 2019-11-29 and 2.2.0 dated 2020-04-23
DESCRIPTION | 8 ++++---- MD5 | 34 ++++++++++++++++++---------------- NAMESPACE | 1 + NEWS | 3 ++- R/catatis.R | 14 ++++++++++++-- R/change_cata_format.R | 4 ++-- R/cluscata.R | 20 ++++++++++++++++++-- R/cluscata_kmeans.R | 9 +++++++++ R/clustatis.R | 5 ++--- R/consistency_cata.R | 28 +++++++++++++++++++++++++++- R/consistency_cata_panel.R |only R/plot.clustatis.R | 10 ++++++---- R/plot.statis.R | 24 ++++++++++++++++++++---- inst/CITATION | 6 +++--- man/change_cata_format.Rd | 4 ++-- man/consistency_cata.Rd | 2 +- man/consistency_cata_panel.Rd |only man/plot.clustatis.Rd | 4 +++- man/plot.statis.Rd | 9 ++++++++- 19 files changed, 138 insertions(+), 47 deletions(-)
Title: Analysis of Data with Mixed Measurement Error and
Misclassification in Covariates
Description: Implementation of the augmented
Simulation-Extrapolation (SIMEX) algorithm proposed by Yi et al. (2015) <doi:10.1080/01621459.2014.922777>
for analyzing the data with mixed measurement error and misclassification. The main
function provides a similar summary output as that of glm() function. Both parametric and
empirical SIMEX are considered in the package.
Author: Qihuang Zhang <qihuang.zhang@uwaterloo.ca>, Grace Y. Yi <yyi@uwaterloo.ca>
Maintainer: Qihuang Zhang <qihuang.zhang@uwaterloo.ca>
Diff between augSIMEX versions 3.7.3 dated 2019-06-12 and 3.7.4 dated 2020-04-23
DESCRIPTION | 11 +++++------ MD5 | 8 ++++---- NAMESPACE | 1 - R/augSIMEX.R | 36 ++++++++++-------------------------- man/augSIMEX.Rd | 6 +----- 5 files changed, 20 insertions(+), 42 deletions(-)
Title: Bayesian A/B Testing
Description: Provides functions for Bayesian A/B testing including prior elicitation
options based on Kass and Vaidyanathan (1992) <doi:10.1111/j.2517-6161.1992.tb01868.x>.
Author: Quentin F. Gronau [aut, cre],
Akash Raj [ctb],
Eric-Jan Wagenmakers [ths]
Maintainer: Quentin F. Gronau <Quentin.F.Gronau@gmail.com>
Diff between abtest versions 0.2.0 dated 2019-09-10 and 0.2.1 dated 2020-04-23
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- NAMESPACE | 2 +- NEWS | 4 ++++ R/ab_test.R | 2 +- R/plot_sequential.R | 3 ++- 6 files changed, 17 insertions(+), 12 deletions(-)
Title: Analysis Of The Interpopulation Difference In Degree of Sexual
Dimorphism Using Summary Statistics
Description: Provides two approaches of comparison; the univariate and the multivariate analysis in two or more populations. Since the main obstacle of performing systematic comparisons in anthropological studies is the absence of raw data, the current package offer a solution for this problem by allowing the use of published summary statistics of metric data (mean, standard deviation and sex specific sample size) as illustrated by the works of Greene, D. L. (1989) <doi:10.1002/ajpa.1330790113> and Konigsberg, L. W. (1991) <doi:10.1002/ajpa.1330840110>.
Author: Bassam A. Abulnoor [aut, cre] (<https://orcid.org/0000-0003-4351-2754>),
MennattAllah H. Attia [aut] (<https://orcid.org/0000-0002-2304-532X>),
Lyle W. Konigsberg [ctb, dtc] (<https://orcid.org/0000-0003-4052-1575>)
Maintainer: Bassam A. Abulnoor <bas12@fayoum.edu.eg>
Diff between TestDimorph versions 0.3.0 dated 2020-01-30 and 0.3.1 dated 2020-04-23
DESCRIPTION | 10 MD5 | 26 +- NAMESPACE | 126 +++++----- NEWS.md | 4 R/AccuModel.R | 450 ++++++++++++++++++--------------------- build/partial.rdb |binary man/AccuModel.Rd | 5 man/Howells.Rd | 6 man/R.Rd | 4 man/TestDimorph-deprecated.Rd | 52 ++-- man/baboon.parms_df.Rd | 6 man/baboon.parms_list.Rd | 6 tests/testthat/test-AccuModel.R | 6 tests/testthat/test-univariate.R | 8 14 files changed, 350 insertions(+), 359 deletions(-)
Title: Recency, Frequency and Monetary Value Analysis
Description: Tools for RFM (recency, frequency and monetary value) analysis.
Generate RFM score from both transaction and customer level data. Visualize the
relationship between recency, frequency and monetary value using heatmap,
histograms, bar charts and scatter plots. Includes a 'shiny' app for
interactive segmentation. References:
i. Blattberg R.C., Kim BD., Neslin S.A (2008) <doi:10.1007/978-0-387-72579-6_12>.
Author: Aravind Hebbali [aut, cre] (<https://orcid.org/0000-0001-9220-9669>)
Maintainer: Aravind Hebbali <hebbali.aravind@gmail.com>
Diff between rfm versions 0.2.0 dated 2019-01-14 and 0.2.1 dated 2020-04-23
DESCRIPTION | 11 MD5 | 98 - NEWS.md | 10 R/rfm-plots-data.R | 9 R/rfm-plots.R | 66 - R/rfm-segment.R | 27 R/rfm-table-customer-2.R | 76 - R/rfm-table-customer.R | 76 - R/rfm-table-transaction.R | 78 - R/utils.R | 19 R/zzz.R | 20 README.md | 74 - build/vignette.rds |binary inst/doc/rfm-customer-level-data.R | 141 -- inst/doc/rfm-customer-level-data.Rmd | 109 - inst/doc/rfm-customer-level-data.html | 267 ++-- inst/doc/rfm-transaction-level-data.R | 141 -- inst/doc/rfm-transaction-level-data.Rmd | 110 -- inst/doc/rfm-transaction-level-data.html | 260 ++-- man/rfm_bar_chart.Rd | 5 man/rfm_heatmap.Rd | 4 man/rfm_histograms.Rd | 4 man/rfm_order_dist.Rd | 4 man/rfm_plot_median_recency.Rd | 8 man/rfm_rm_plot.Rd | 11 man/rfm_table_customer.Rd | 27 man/rfm_table_customer_2.Rd | 27 man/rfm_table_order.Rd | 28 tests/figs/deps.txt | 8 tests/figs/test-rfm-plots-r/rfm-barchart.svg | 1033 ++++++++++++++++++ tests/figs/test-rfm-plots-r/rfm-fmplot.svg | 1039 ++++++++++++++++++ tests/figs/test-rfm-plots-r/rfm-heatmap.svg | 110 +- tests/figs/test-rfm-plots-r/rfm-histograms.svg | 195 +++ tests/figs/test-rfm-plots-r/rfm-median-frequency.svg | 87 + tests/figs/test-rfm-plots-r/rfm-median-monetary.svg | 86 + tests/figs/test-rfm-plots-r/rfm-median-recency.svg | 95 + tests/figs/test-rfm-plots-r/rfm-orderdist.svg | 93 + tests/figs/test-rfm-plots-r/rfm-rfplot.svg | 1041 ++++++++++++++++++ tests/figs/test-rfm-plots-r/rfm-rmplot.svg | 1045 ++++++++++++++++++- tests/testthat/test-rfm-plots.R | 20 tests/testthat/test-rfm-table.R | 89 + tools/README-barchart-1.png |binary tools/README-fm-1.png |binary tools/README-fr-1.png |binary tools/README-heatmap-1.png |binary tools/README-mr-1.png |binary tools/README-rfmhist-1.png |binary tools/README-rfmorders-1.png |binary vignettes/rfm-customer-level-data.Rmd | 109 - vignettes/rfm-transaction-level-data.Rmd | 110 -- 50 files changed, 5736 insertions(+), 1134 deletions(-)
Title: Interface for the 'Finnish Biodiversity Information Facility'
API
Description: A programmatic interface to the 'Finnish Biodiversity Information
Facility' ('FinBIF') API (<https://api.laji.fi>). 'FinBIF' aggregates
Finnish biodiversity data from multiple sources in a single open access
portal for researchers, citizen scientists, industry and government.
'FinBIF' allows users of biodiversity information to find, access, combine
and visualise data on Finnish plants, animals and microorganisms. The
'finbif' package makes the publicly available data in 'FinBIF' easily
accessible to programmers. Biodiversity information is available on taxonomy
and taxon occurrence. Occurrence data can be filtered by taxon, time,
location and other variables. The data accessed are conveniently
preformatted for subsequent analyses.
Author: LUOMUS - Finnish Museum of Natural History [cph],
William Morris [aut, cre] (<https://orcid.org/0000-0002-8686-4154>)
Maintainer: William Morris <willi@mmorris.email>
Diff between finbif versions 0.2.0 dated 2020-01-16 and 0.3.0 dated 2020-04-23
finbif-0.2.0/finbif/R/finbif_api_get.R |only finbif-0.2.0/finbif/R/finbif_coords.R |only finbif-0.2.0/finbif/R/finbif_dates.R |only finbif-0.2.0/finbif/R/finbif_token.R |only finbif-0.2.0/finbif/inst/doc/v02_filtering.Rmd |only finbif-0.2.0/finbif/inst/doc/v02_filtering.html |only finbif-0.2.0/finbif/inst/vign/cache/admin-status-eval_33c75f99b3b6661a2aa4b9847d5b678c.RData |only finbif-0.2.0/finbif/inst/vign/cache/admin-status-eval_33c75f99b3b6661a2aa4b9847d5b678c.rdb |only finbif-0.2.0/finbif/inst/vign/cache/admin-status-eval_33c75f99b3b6661a2aa4b9847d5b678c.rdx |only finbif-0.2.0/finbif/inst/vign/cache/collection-filter-eval_31cefc9c4dbaf4c086d15596cadd184a.RData |only finbif-0.2.0/finbif/inst/vign/cache/collection-filter-eval_31cefc9c4dbaf4c086d15596cadd184a.rdb |only finbif-0.2.0/finbif/inst/vign/cache/collection-filter-eval_31cefc9c4dbaf4c086d15596cadd184a.rdx |only finbif-0.2.0/finbif/inst/vign/cache/date-filter-eval_a900a1d2ee122a1f108ce85aa08a8d95.RData |only finbif-0.2.0/finbif/inst/vign/cache/date-filter-eval_a900a1d2ee122a1f108ce85aa08a8d95.rdb |only finbif-0.2.0/finbif/inst/vign/cache/date-filter-eval_a900a1d2ee122a1f108ce85aa08a8d95.rdx |only finbif-0.2.0/finbif/inst/vign/cache/date-range-filter-eval_1d33117ff292292066288bbb39dac8c6.RData |only finbif-0.2.0/finbif/inst/vign/cache/date-range-filter-eval_1d33117ff292292066288bbb39dac8c6.rdb |only finbif-0.2.0/finbif/inst/vign/cache/date-range-filter-eval_1d33117ff292292066288bbb39dac8c6.rdx |only finbif-0.2.0/finbif/inst/vign/cache/habitat-type-filter-eval_36a27ca37528803b26f23951b86abb39.RData |only finbif-0.2.0/finbif/inst/vign/cache/habitat-type-filter-eval_36a27ca37528803b26f23951b86abb39.rdb |only finbif-0.2.0/finbif/inst/vign/cache/habitat-type-filter-eval_36a27ca37528803b26f23951b86abb39.rdx |only finbif-0.2.0/finbif/inst/vign/cache/habitat-type-head_91cbba23dc28f7cde31afc0b6904e550.RData |only finbif-0.2.0/finbif/inst/vign/cache/habitat-type-head_91cbba23dc28f7cde31afc0b6904e550.rdb |only finbif-0.2.0/finbif/inst/vign/cache/habitat-type-head_91cbba23dc28f7cde31afc0b6904e550.rdx |only finbif-0.2.0/finbif/inst/vign/cache/habitat-type-specific-filter-eval_1a216253a454c270c8003b737a90d8b6.RData |only finbif-0.2.0/finbif/inst/vign/cache/habitat-type-specific-filter-eval_1a216253a454c270c8003b737a90d8b6.rdb |only finbif-0.2.0/finbif/inst/vign/cache/habitat-type-specific-filter-eval_1a216253a454c270c8003b737a90d8b6.rdx |only finbif-0.2.0/finbif/inst/vign/cache/habitat-type-specific-meta_5ecb453fccc5078ae73c664c152eadcd.RData |only finbif-0.2.0/finbif/inst/vign/cache/habitat-type-specific-meta_5ecb453fccc5078ae73c664c152eadcd.rdb |only finbif-0.2.0/finbif/inst/vign/cache/habitat-type-specific-meta_5ecb453fccc5078ae73c664c152eadcd.rdx |only finbif-0.2.0/finbif/inst/vign/cache/informal-groups-eval_9cc6129913e5ab993cb70d9e09a8948c.RData |only finbif-0.2.0/finbif/inst/vign/cache/informal-groups-eval_9cc6129913e5ab993cb70d9e09a8948c.rdb |only finbif-0.2.0/finbif/inst/vign/cache/informal-groups-eval_9cc6129913e5ab993cb70d9e09a8948c.rdx |only finbif-0.2.0/finbif/inst/vign/cache/location-filter-eval_05a29ff3fed9df9351abf5c7c8cb228c.RData |only finbif-0.2.0/finbif/inst/vign/cache/location-filter-eval_05a29ff3fed9df9351abf5c7c8cb228c.rdb |only finbif-0.2.0/finbif/inst/vign/cache/location-filter-eval_05a29ff3fed9df9351abf5c7c8cb228c.rdx |only finbif-0.2.0/finbif/inst/vign/cache/occurrence-status-filter-eval_698d8caccd40960a7a00cce4ae11e616.RData |only finbif-0.2.0/finbif/inst/vign/cache/occurrence-status-filter-eval_698d8caccd40960a7a00cce4ae11e616.rdb |only finbif-0.2.0/finbif/inst/vign/cache/occurrence-status-filter-eval_698d8caccd40960a7a00cce4ae11e616.rdx |only finbif-0.2.0/finbif/inst/vign/cache/occurrence-status-neg-filter-eval_096da9aed7f0312c458fe3adaf358fcb.RData |only finbif-0.2.0/finbif/inst/vign/cache/occurrence-status-neg-filter-eval_096da9aed7f0312c458fe3adaf358fcb.rdb |only finbif-0.2.0/finbif/inst/vign/cache/occurrence-status-neg-filter-eval_096da9aed7f0312c458fe3adaf358fcb.rdx |only finbif-0.2.0/finbif/inst/vign/cache/occurrence2-eval_9fb9fd808857919a3eb80b4381215134.RData |only finbif-0.2.0/finbif/inst/vign/cache/occurrence2-eval_9fb9fd808857919a3eb80b4381215134.rdb |only finbif-0.2.0/finbif/inst/vign/cache/occurrence2-eval_9fb9fd808857919a3eb80b4381215134.rdx |only finbif-0.2.0/finbif/inst/vign/cache/occurrence_256a8e328f8a2f96f43fc3b628bc8056.RData |only finbif-0.2.0/finbif/inst/vign/cache/occurrence_256a8e328f8a2f96f43fc3b628bc8056.rdb |only finbif-0.2.0/finbif/inst/vign/cache/occurrence_256a8e328f8a2f96f43fc3b628bc8056.rdx |only finbif-0.2.0/finbif/inst/vign/cache/plot-occurrences-eval_d0a0aeb60af2fce3ce8c4343cc0a0a93.RData |only finbif-0.2.0/finbif/inst/vign/cache/plot-occurrences-eval_d0a0aeb60af2fce3ce8c4343cc0a0a93.rdb |only finbif-0.2.0/finbif/inst/vign/cache/plot-occurrences-eval_d0a0aeb60af2fce3ce8c4343cc0a0a93.rdx |only finbif-0.2.0/finbif/inst/vign/cache/quality-filter-eval_d92bb59ca95905d778f222053290d07e.RData |only finbif-0.2.0/finbif/inst/vign/cache/quality-filter-eval_d92bb59ca95905d778f222053290d07e.rdb |only finbif-0.2.0/finbif/inst/vign/cache/quality-filter-eval_d92bb59ca95905d778f222053290d07e.rdx |only finbif-0.2.0/finbif/inst/vign/cache/random-sample-eval_a1b7b2957dc024d6955df44593f6273d.RData |only finbif-0.2.0/finbif/inst/vign/cache/random-sample-eval_a1b7b2957dc024d6955df44593f6273d.rdb |only finbif-0.2.0/finbif/inst/vign/cache/random-sample-eval_a1b7b2957dc024d6955df44593f6273d.rdx |only finbif-0.2.0/finbif/inst/vign/cache/red-list-status-eval_91e28f1ac163b6c224a9d8c69fd60e0e.RData |only finbif-0.2.0/finbif/inst/vign/cache/red-list-status-eval_91e28f1ac163b6c224a9d8c69fd60e0e.rdb |only finbif-0.2.0/finbif/inst/vign/cache/red-list-status-eval_91e28f1ac163b6c224a9d8c69fd60e0e.rdx |only finbif-0.2.0/finbif/inst/vign/cache/season-filter-eval_6c5a5f7cd2b4a0526bbb29e3b5065e3f.RData |only finbif-0.2.0/finbif/inst/vign/cache/season-filter-eval_6c5a5f7cd2b4a0526bbb29e3b5065e3f.rdb |only finbif-0.2.0/finbif/inst/vign/cache/season-filter-eval_6c5a5f7cd2b4a0526bbb29e3b5065e3f.rdx |only finbif-0.2.0/finbif/inst/vign/cache/taxon-check_9b1fead15cd22172c8072ce95571b533.RData |only finbif-0.2.0/finbif/inst/vign/cache/taxon-check_9b1fead15cd22172c8072ce95571b533.rdb |only finbif-0.2.0/finbif/inst/vign/cache/taxon-check_9b1fead15cd22172c8072ce95571b533.rdx |only finbif-0.2.0/finbif/inst/vign/cache/taxon-not-found_a67ffe8a96a1ec7c8ce8a203b45b38e1.RData |only finbif-0.2.0/finbif/inst/vign/cache/taxon-not-found_a67ffe8a96a1ec7c8ce8a203b45b38e1.rdb |only finbif-0.2.0/finbif/inst/vign/cache/taxon-not-found_a67ffe8a96a1ec7c8ce8a203b45b38e1.rdx |only finbif-0.2.0/finbif/inst/vign/cache/taxon-rank_19f67bfd4b2032f4098f0b88609b57be.RData |only finbif-0.2.0/finbif/inst/vign/cache/taxon-rank_19f67bfd4b2032f4098f0b88609b57be.rdb |only finbif-0.2.0/finbif/inst/vign/cache/taxon-rank_19f67bfd4b2032f4098f0b88609b57be.rdx |only finbif-0.2.0/finbif/inst/vign/cache/taxon-search-eval_2c9d1638de0b48a3b0cb29d1c7212eb8.RData |only finbif-0.2.0/finbif/inst/vign/cache/taxon-search-eval_2c9d1638de0b48a3b0cb29d1c7212eb8.rdb |only finbif-0.2.0/finbif/inst/vign/cache/taxon-search-eval_2c9d1638de0b48a3b0cb29d1c7212eb8.rdx |only finbif-0.2.0/finbif/inst/vign/figure |only finbif-0.2.0/finbif/inst/vign/v02_filtering.Rmd |only finbif-0.2.0/finbif/inst/vign/v02_filtering.md |only finbif-0.2.0/finbif/tests/api-dev-cassettes/finbif_api_get.yml |only finbif-0.2.0/finbif/tests/api-dev-cassettes/finbif_dates.yml |only finbif-0.2.0/finbif/tests/cassettes/finbif_api_get.yml |only finbif-0.2.0/finbif/tests/cassettes/finbif_dates.yml |only finbif-0.2.0/finbif/vignettes/v02_filtering.Rmd |only finbif-0.3.0/finbif/DESCRIPTION | 14 finbif-0.3.0/finbif/MD5 | 422 + finbif-0.3.0/finbif/NAMESPACE | 5 finbif-0.3.0/finbif/NEWS.md | 101 finbif-0.3.0/finbif/R/api_get.R |only finbif-0.3.0/finbif/R/caching.R | 27 finbif-0.3.0/finbif/R/coords.R |only finbif-0.3.0/finbif/R/dates.R |only finbif-0.3.0/finbif/R/filters.R | 44 finbif-0.3.0/finbif/R/finbif-package.R | 20 finbif-0.3.0/finbif/R/finbif_check_taxa.R | 2 finbif-0.3.0/finbif/R/finbif_clear_cache.R | 15 finbif-0.3.0/finbif/R/finbif_collections.R | 5 finbif-0.3.0/finbif/R/finbif_informal_groups.R | 3 finbif-0.3.0/finbif/R/finbif_metadata.R | 3 finbif-0.3.0/finbif/R/finbif_occurrence.R | 133 finbif-0.3.0/finbif/R/finbif_records.R | 163 finbif-0.3.0/finbif/R/finbif_request_token.R | 5 finbif-0.3.0/finbif/R/finbif_taxa.R | 4 finbif-0.3.0/finbif/R/map-utils.R | 4 finbif-0.3.0/finbif/R/methods.R | 232 - finbif-0.3.0/finbif/R/sysdata.rda |binary finbif-0.3.0/finbif/R/token.R |only finbif-0.3.0/finbif/R/utils.R | 75 finbif-0.3.0/finbif/R/variables.R | 36 finbif-0.3.0/finbif/R/zzz.R | 8 finbif-0.3.0/finbif/README.md | 2 finbif-0.3.0/finbif/build/vignette.rds |binary finbif-0.3.0/finbif/data/finland_map.rda |binary finbif-0.3.0/finbif/inst/NEWS.Rd |only finbif-0.3.0/finbif/inst/doc/finbif.Rmd | 367 - finbif-0.3.0/finbif/inst/doc/finbif.html | 1112 ++-- finbif-0.3.0/finbif/inst/doc/v02_occurrence_data.Rmd |only finbif-0.3.0/finbif/inst/doc/v02_occurrence_data.html |only finbif-0.3.0/finbif/inst/doc/v03_selecting_variables.Rmd |only finbif-0.3.0/finbif/inst/doc/v03_selecting_variables.html |only finbif-0.3.0/finbif/inst/doc/v04_metadata.Rmd |only finbif-0.3.0/finbif/inst/doc/v04_metadata.html |only finbif-0.3.0/finbif/inst/doc/v05_filtering.Rmd |only finbif-0.3.0/finbif/inst/doc/v05_filtering.html |only finbif-0.3.0/finbif/inst/doc/v06_plotting.Rmd |only finbif-0.3.0/finbif/inst/doc/v06_plotting.html |only finbif-0.3.0/finbif/inst/vign/cache/__packages | 2 finbif-0.3.0/finbif/inst/vign/cache/admin-status_49018fd27b463cc682122764818e9f8a.RData |only finbif-0.3.0/finbif/inst/vign/cache/admin-status_49018fd27b463cc682122764818e9f8a.rdb |only finbif-0.3.0/finbif/inst/vign/cache/admin-status_49018fd27b463cc682122764818e9f8a.rdx |only finbif-0.3.0/finbif/inst/vign/cache/bbox_a54ff7ec7cc91d3668632c2ef497f740.RData |only finbif-0.3.0/finbif/inst/vign/cache/bbox_a54ff7ec7cc91d3668632c2ef497f740.rdb |only finbif-0.3.0/finbif/inst/vign/cache/bbox_a54ff7ec7cc91d3668632c2ef497f740.rdx |only finbif-0.3.0/finbif/inst/vign/cache/birch-search_d7ccfdedb2c97dd2157d7aa8a3870c04.RData |only finbif-0.3.0/finbif/inst/vign/cache/birch-search_d7ccfdedb2c97dd2157d7aa8a3870c04.rdb |only finbif-0.3.0/finbif/inst/vign/cache/birch-search_d7ccfdedb2c97dd2157d7aa8a3870c04.rdx |only finbif-0.3.0/finbif/inst/vign/cache/birds_ff677ae459d12d6aca2c6bac594496a6.RData |only finbif-0.3.0/finbif/inst/vign/cache/birds_ff677ae459d12d6aca2c6bac594496a6.rdb |only finbif-0.3.0/finbif/inst/vign/cache/birds_ff677ae459d12d6aca2c6bac594496a6.rdx |only finbif-0.3.0/finbif/inst/vign/cache/collection-filter_08c382f823459dc0749d8c809ac240d6.RData |only finbif-0.3.0/finbif/inst/vign/cache/collection-filter_08c382f823459dc0749d8c809ac240d6.rdb |only finbif-0.3.0/finbif/inst/vign/cache/collection-filter_08c382f823459dc0749d8c809ac240d6.rdx |only finbif-0.3.0/finbif/inst/vign/cache/collections-128_076e9f95a6b448285166541a7e2a5016.RData |only finbif-0.3.0/finbif/inst/vign/cache/collections-128_076e9f95a6b448285166541a7e2a5016.rdb |only finbif-0.3.0/finbif/inst/vign/cache/collections-128_076e9f95a6b448285166541a7e2a5016.rdx |only finbif-0.3.0/finbif/inst/vign/cache/collections-finland_466afc7c88f8dfa07af53f4877e25206.RData |only finbif-0.3.0/finbif/inst/vign/cache/collections-finland_466afc7c88f8dfa07af53f4877e25206.rdb |only finbif-0.3.0/finbif/inst/vign/cache/collections-finland_466afc7c88f8dfa07af53f4877e25206.rdx |only finbif-0.3.0/finbif/inst/vign/cache/count-only_494a070a0db8883a707590ff96e12900.RData |only finbif-0.3.0/finbif/inst/vign/cache/count-only_494a070a0db8883a707590ff96e12900.rdb |only finbif-0.3.0/finbif/inst/vign/cache/count-only_494a070a0db8883a707590ff96e12900.rdx |only finbif-0.3.0/finbif/inst/vign/cache/cygnus2_1e9fc15161f566730776c5389487e022.RData |only finbif-0.3.0/finbif/inst/vign/cache/cygnus2_1e9fc15161f566730776c5389487e022.rdb |only finbif-0.3.0/finbif/inst/vign/cache/cygnus2_1e9fc15161f566730776c5389487e022.rdx |only finbif-0.3.0/finbif/inst/vign/cache/cygnus_732861923237591508a61639a8cc36c9.RData |only finbif-0.3.0/finbif/inst/vign/cache/cygnus_732861923237591508a61639a8cc36c9.rdb |only finbif-0.3.0/finbif/inst/vign/cache/cygnus_732861923237591508a61639a8cc36c9.rdx |only finbif-0.3.0/finbif/inst/vign/cache/date-filter_63c179b2468c83106318bae45e8b20db.RData |only finbif-0.3.0/finbif/inst/vign/cache/date-filter_63c179b2468c83106318bae45e8b20db.rdb |only finbif-0.3.0/finbif/inst/vign/cache/date-filter_63c179b2468c83106318bae45e8b20db.rdx |only finbif-0.3.0/finbif/inst/vign/cache/date-range-filter_ecb03a5093a384c3d7a713ab8ffbe737.RData |only finbif-0.3.0/finbif/inst/vign/cache/date-range-filter_ecb03a5093a384c3d7a713ab8ffbe737.rdb |only finbif-0.3.0/finbif/inst/vign/cache/date-range-filter_ecb03a5093a384c3d7a713ab8ffbe737.rdx |only finbif-0.3.0/finbif/inst/vign/cache/date-time-accurate_fe45abe6fa4b4b8c703fe0a6627671bd.RData |only finbif-0.3.0/finbif/inst/vign/cache/date-time-accurate_fe45abe6fa4b4b8c703fe0a6627671bd.rdb |only finbif-0.3.0/finbif/inst/vign/cache/date-time-accurate_fe45abe6fa4b4b8c703fe0a6627671bd.rdx |only finbif-0.3.0/finbif/inst/vign/cache/date-time-false_09a1ee6254d076babe1881ba3bd67770.RData |only finbif-0.3.0/finbif/inst/vign/cache/date-time-false_09a1ee6254d076babe1881ba3bd67770.rdb |only finbif-0.3.0/finbif/inst/vign/cache/date-time-false_09a1ee6254d076babe1881ba3bd67770.rdx |only finbif-0.3.0/finbif/inst/vign/cache/dwc_965bc780d8a9df660134aff2cf6da19f.RData |only finbif-0.3.0/finbif/inst/vign/cache/dwc_965bc780d8a9df660134aff2cf6da19f.rdb |only finbif-0.3.0/finbif/inst/vign/cache/dwc_965bc780d8a9df660134aff2cf6da19f.rdx |only finbif-0.3.0/finbif/inst/vign/cache/extras_a5a765d9e75df1742d40dcb8eade4370.RData |only finbif-0.3.0/finbif/inst/vign/cache/extras_a5a765d9e75df1742d40dcb8eade4370.rdb |only finbif-0.3.0/finbif/inst/vign/cache/extras_a5a765d9e75df1742d40dcb8eade4370.rdx |only finbif-0.3.0/finbif/inst/vign/cache/finland-breaks_cc5c189fd79d8e3a1f2c4a8d2b8c4173.RData |only finbif-0.3.0/finbif/inst/vign/cache/finland-breaks_cc5c189fd79d8e3a1f2c4a8d2b8c4173.rdb |only finbif-0.3.0/finbif/inst/vign/cache/finland-breaks_cc5c189fd79d8e3a1f2c4a8d2b8c4173.rdx |only finbif-0.3.0/finbif/inst/vign/cache/habitat-type-filter_14ae9d29075dd903547300184bda3204.RData |only finbif-0.3.0/finbif/inst/vign/cache/habitat-type-filter_14ae9d29075dd903547300184bda3204.rdb |only finbif-0.3.0/finbif/inst/vign/cache/habitat-type-filter_14ae9d29075dd903547300184bda3204.rdx |only finbif-0.3.0/finbif/inst/vign/cache/habitat-type-head_fa1e3055877ea9be31e403fab184b2a8.RData |only finbif-0.3.0/finbif/inst/vign/cache/habitat-type-head_fa1e3055877ea9be31e403fab184b2a8.rdb |only finbif-0.3.0/finbif/inst/vign/cache/habitat-type-head_fa1e3055877ea9be31e403fab184b2a8.rdx |only finbif-0.3.0/finbif/inst/vign/cache/habitat-type-specific-filter_9ba48adfcbac23aa69a4329647e10fc8.RData |only finbif-0.3.0/finbif/inst/vign/cache/habitat-type-specific-filter_9ba48adfcbac23aa69a4329647e10fc8.rdb |only finbif-0.3.0/finbif/inst/vign/cache/habitat-type-specific-filter_9ba48adfcbac23aa69a4329647e10fc8.rdx |only finbif-0.3.0/finbif/inst/vign/cache/habitat-type-specific-meta_6443171006db81511095b655fe72c149.RData |only finbif-0.3.0/finbif/inst/vign/cache/habitat-type-specific-meta_6443171006db81511095b655fe72c149.rdb |only finbif-0.3.0/finbif/inst/vign/cache/habitat-type-specific-meta_6443171006db81511095b655fe72c149.rdx |only finbif-0.3.0/finbif/inst/vign/cache/informal-groups-crustacea_06297403293d05d0114f512281036d05.RData |only finbif-0.3.0/finbif/inst/vign/cache/informal-groups-crustacea_06297403293d05d0114f512281036d05.rdb |only finbif-0.3.0/finbif/inst/vign/cache/informal-groups-crustacea_06297403293d05d0114f512281036d05.rdx |only finbif-0.3.0/finbif/inst/vign/cache/informal-groups-filter_9424e8d5d9649665aa7668657f024a26.RData |only finbif-0.3.0/finbif/inst/vign/cache/informal-groups-filter_9424e8d5d9649665aa7668657f024a26.rdb |only finbif-0.3.0/finbif/inst/vign/cache/informal-groups-filter_9424e8d5d9649665aa7668657f024a26.rdx |only finbif-0.3.0/finbif/inst/vign/cache/informal-groups6_53c6bc1d637f1bdace7b9255a2478fcc.RData |only finbif-0.3.0/finbif/inst/vign/cache/informal-groups6_53c6bc1d637f1bdace7b9255a2478fcc.rdb |only finbif-0.3.0/finbif/inst/vign/cache/informal-groups6_53c6bc1d637f1bdace7b9255a2478fcc.rdx |only finbif-0.3.0/finbif/inst/vign/cache/informal-subgroups_2d70dc1d3c12f0f85f061aa9901bf277.RData |only finbif-0.3.0/finbif/inst/vign/cache/informal-subgroups_2d70dc1d3c12f0f85f061aa9901bf277.rdb |only finbif-0.3.0/finbif/inst/vign/cache/informal-subgroups_2d70dc1d3c12f0f85f061aa9901bf277.rdx |only finbif-0.3.0/finbif/inst/vign/cache/jay-density_bf1f5004f45e141d19112cc50c9c978d.RData |only finbif-0.3.0/finbif/inst/vign/cache/jay-density_bf1f5004f45e141d19112cc50c9c978d.rdb |only finbif-0.3.0/finbif/inst/vign/cache/jay-density_bf1f5004f45e141d19112cc50c9c978d.rdx |only finbif-0.3.0/finbif/inst/vign/cache/jays_a840f84b713b7b14a5cce6d3a8070d98.RData |only finbif-0.3.0/finbif/inst/vign/cache/jays_a840f84b713b7b14a5cce6d3a8070d98.rdb |only finbif-0.3.0/finbif/inst/vign/cache/jays_a840f84b713b7b14a5cce6d3a8070d98.rdx |only finbif-0.3.0/finbif/inst/vign/cache/limiting_82dc7aa14a509d013bb38424339dc197.RData |only finbif-0.3.0/finbif/inst/vign/cache/limiting_82dc7aa14a509d013bb38424339dc197.rdb |only finbif-0.3.0/finbif/inst/vign/cache/limiting_82dc7aa14a509d013bb38424339dc197.rdx |only finbif-0.3.0/finbif/inst/vign/cache/location-filter_1cbbee9a6a19fad591011176fb04116b.RData |only finbif-0.3.0/finbif/inst/vign/cache/location-filter_1cbbee9a6a19fad591011176fb04116b.rdb |only finbif-0.3.0/finbif/inst/vign/cache/location-filter_1cbbee9a6a19fad591011176fb04116b.rdx |only finbif-0.3.0/finbif/inst/vign/cache/luomus-collection_ba104701be06878c6d785d5d857f5b5a.RData |only finbif-0.3.0/finbif/inst/vign/cache/luomus-collection_ba104701be06878c6d785d5d857f5b5a.rdb |only finbif-0.3.0/finbif/inst/vign/cache/luomus-collection_ba104701be06878c6d785d5d857f5b5a.rdx |only finbif-0.3.0/finbif/inst/vign/cache/metadata-general_6f261c7a9b330af59ed594703f2e7256.RData |only finbif-0.3.0/finbif/inst/vign/cache/metadata-general_6f261c7a9b330af59ed594703f2e7256.rdb |only finbif-0.3.0/finbif/inst/vign/cache/metadata-general_6f261c7a9b330af59ed594703f2e7256.rdx |only finbif-0.3.0/finbif/inst/vign/cache/metadata-red-list_925dc99accb866bb4860897c9f3c6553.RData |only finbif-0.3.0/finbif/inst/vign/cache/metadata-red-list_925dc99accb866bb4860897c9f3c6553.rdb |only finbif-0.3.0/finbif/inst/vign/cache/metadata-red-list_925dc99accb866bb4860897c9f3c6553.rdx |only finbif-0.3.0/finbif/inst/vign/cache/moomin-check-error_c6f938f1890aa2fc3cdfb902eef444d2.RData |only finbif-0.3.0/finbif/inst/vign/cache/moomin-check-error_c6f938f1890aa2fc3cdfb902eef444d2.rdb |only finbif-0.3.0/finbif/inst/vign/cache/moomin-check-error_c6f938f1890aa2fc3cdfb902eef444d2.rdx |only finbif-0.3.0/finbif/inst/vign/cache/moomin-check-false_92c4a7ee69993a90982e915c0c3d5547.RData |only finbif-0.3.0/finbif/inst/vign/cache/moomin-check-false_92c4a7ee69993a90982e915c0c3d5547.rdb |only finbif-0.3.0/finbif/inst/vign/cache/moomin-check-false_92c4a7ee69993a90982e915c0c3d5547.rdx |only finbif-0.3.0/finbif/inst/vign/cache/moomin_f5024feed98f96ffef7bb121cea1c525.RData |only finbif-0.3.0/finbif/inst/vign/cache/moomin_f5024feed98f96ffef7bb121cea1c525.rdb |only finbif-0.3.0/finbif/inst/vign/cache/moomin_f5024feed98f96ffef7bb121cea1c525.rdx |only finbif-0.3.0/finbif/inst/vign/cache/occurrence-status-filter_6affa022fbb6714db42aa2f91a14b53e.RData |only finbif-0.3.0/finbif/inst/vign/cache/occurrence-status-filter_6affa022fbb6714db42aa2f91a14b53e.rdb |only finbif-0.3.0/finbif/inst/vign/cache/occurrence-status-filter_6affa022fbb6714db42aa2f91a14b53e.rdx |only finbif-0.3.0/finbif/inst/vign/cache/occurrence-status-neg-filter_14c3b9de1a863ca608043e924b8df839.RData |only finbif-0.3.0/finbif/inst/vign/cache/occurrence-status-neg-filter_14c3b9de1a863ca608043e924b8df839.rdb |only finbif-0.3.0/finbif/inst/vign/cache/occurrence-status-neg-filter_14c3b9de1a863ca608043e924b8df839.rdx |only finbif-0.3.0/finbif/inst/vign/cache/occurrence2_56801216ed2e596a5b1f4ee3c656aff3.RData |only finbif-0.3.0/finbif/inst/vign/cache/occurrence2_56801216ed2e596a5b1f4ee3c656aff3.rdb |only finbif-0.3.0/finbif/inst/vign/cache/occurrence2_56801216ed2e596a5b1f4ee3c656aff3.rdx |only finbif-0.3.0/finbif/inst/vign/cache/occurrence_3c2aac47c77bb00b16d5fdd9aa47ee66.RData |only finbif-0.3.0/finbif/inst/vign/cache/occurrence_3c2aac47c77bb00b16d5fdd9aa47ee66.rdb |only finbif-0.3.0/finbif/inst/vign/cache/occurrence_3c2aac47c77bb00b16d5fdd9aa47ee66.rdx |only finbif-0.3.0/finbif/inst/vign/cache/occurrence_vanilla_c1e8723ceca8e462bdfee59355f7bec0.RData |only finbif-0.3.0/finbif/inst/vign/cache/occurrence_vanilla_c1e8723ceca8e462bdfee59355f7bec0.rdb |only finbif-0.3.0/finbif/inst/vign/cache/occurrence_vanilla_c1e8723ceca8e462bdfee59355f7bec0.rdx |only finbif-0.3.0/finbif/inst/vign/cache/occurrences1001_e6fcb9dc4ca0331309aa683506eef31e.RData |only finbif-0.3.0/finbif/inst/vign/cache/occurrences1001_e6fcb9dc4ca0331309aa683506eef31e.rdb |only finbif-0.3.0/finbif/inst/vign/cache/occurrences1001_e6fcb9dc4ca0331309aa683506eef31e.rdx |only finbif-0.3.0/finbif/inst/vign/cache/order-ascend_69042f72b508fa8a23a425c91472a73b.RData |only finbif-0.3.0/finbif/inst/vign/cache/order-ascend_69042f72b508fa8a23a425c91472a73b.rdb |only finbif-0.3.0/finbif/inst/vign/cache/order-ascend_69042f72b508fa8a23a425c91472a73b.rdx |only finbif-0.3.0/finbif/inst/vign/cache/order-descend_dd68be1e792fbcb94e07f200477a7759.RData |only finbif-0.3.0/finbif/inst/vign/cache/order-descend_dd68be1e792fbcb94e07f200477a7759.rdb |only finbif-0.3.0/finbif/inst/vign/cache/order-descend_dd68be1e792fbcb94e07f200477a7759.rdx |only finbif-0.3.0/finbif/inst/vign/cache/order-multiple_5c1649e5cdcaf8f003484ea8472c2c57.RData |only finbif-0.3.0/finbif/inst/vign/cache/order-multiple_5c1649e5cdcaf8f003484ea8472c2c57.rdb |only finbif-0.3.0/finbif/inst/vign/cache/order-multiple_5c1649e5cdcaf8f003484ea8472c2c57.rdx |only finbif-0.3.0/finbif/inst/vign/cache/plot-occurrences-eval_f09be7bc1ef167bf4df3c089b7770623.RData |only finbif-0.3.0/finbif/inst/vign/cache/plot-occurrences-eval_f09be7bc1ef167bf4df3c089b7770623.rdb |only finbif-0.3.0/finbif/inst/vign/cache/plot-occurrences-eval_f09be7bc1ef167bf4df3c089b7770623.rdx |only finbif-0.3.0/finbif/inst/vign/cache/quality-filter_49903c08f7e3457a73938ea46b940f13.RData |only finbif-0.3.0/finbif/inst/vign/cache/quality-filter_49903c08f7e3457a73938ea46b940f13.rdb |only finbif-0.3.0/finbif/inst/vign/cache/quality-filter_49903c08f7e3457a73938ea46b940f13.rdx |only finbif-0.3.0/finbif/inst/vign/cache/random-sample_aeaab5c1177efbc993ad2bafff7abf0c.RData |only finbif-0.3.0/finbif/inst/vign/cache/random-sample_aeaab5c1177efbc993ad2bafff7abf0c.rdb |only finbif-0.3.0/finbif/inst/vign/cache/random-sample_aeaab5c1177efbc993ad2bafff7abf0c.rdx |only finbif-0.3.0/finbif/inst/vign/cache/random_cf2722940d21e4c5fa635b26c7bcfb16.RData |only finbif-0.3.0/finbif/inst/vign/cache/random_cf2722940d21e4c5fa635b26c7bcfb16.rdb |only finbif-0.3.0/finbif/inst/vign/cache/random_cf2722940d21e4c5fa635b26c7bcfb16.rdx |only finbif-0.3.0/finbif/inst/vign/cache/recent-obs_c6b684261d8185e4610949a33353126f.RData |only finbif-0.3.0/finbif/inst/vign/cache/recent-obs_c6b684261d8185e4610949a33353126f.rdb |only finbif-0.3.0/finbif/inst/vign/cache/recent-obs_c6b684261d8185e4610949a33353126f.rdx |only finbif-0.3.0/finbif/inst/vign/cache/red-list-status_18187902806236e0f1ff51db26c4d450.RData |only finbif-0.3.0/finbif/inst/vign/cache/red-list-status_18187902806236e0f1ff51db26c4d450.rdb |only finbif-0.3.0/finbif/inst/vign/cache/red-list-status_18187902806236e0f1ff51db26c4d450.rdx |only finbif-0.3.0/finbif/inst/vign/cache/season-filter_e2f4908b62da61fe025ec9f71f4e1be6.RData |only finbif-0.3.0/finbif/inst/vign/cache/season-filter_e2f4908b62da61fe025ec9f71f4e1be6.rdb |only finbif-0.3.0/finbif/inst/vign/cache/season-filter_e2f4908b62da61fe025ec9f71f4e1be6.rdx |only finbif-0.3.0/finbif/inst/vign/cache/taxon-check_877141d8085ede10c70ef197610f3e29.RData |only finbif-0.3.0/finbif/inst/vign/cache/taxon-check_877141d8085ede10c70ef197610f3e29.rdb |only finbif-0.3.0/finbif/inst/vign/cache/taxon-check_877141d8085ede10c70ef197610f3e29.rdx |only finbif-0.3.0/finbif/inst/vign/cache/taxon-not-found_b574f0d0dec171d8e3785adc82c4c139.RData |only finbif-0.3.0/finbif/inst/vign/cache/taxon-not-found_b574f0d0dec171d8e3785adc82c4c139.rdb |only finbif-0.3.0/finbif/inst/vign/cache/taxon-not-found_b574f0d0dec171d8e3785adc82c4c139.rdx |only finbif-0.3.0/finbif/inst/vign/cache/taxon-rank_f73bc0cf0bf45173fe1af5c04a4915c1.RData |only finbif-0.3.0/finbif/inst/vign/cache/taxon-rank_f73bc0cf0bf45173fe1af5c04a4915c1.rdb |only finbif-0.3.0/finbif/inst/vign/cache/taxon-rank_f73bc0cf0bf45173fe1af5c04a4915c1.rdx |only finbif-0.3.0/finbif/inst/vign/cache/tzone_79cc573f89fb1f83f4ac3d4e3e621884.RData |only finbif-0.3.0/finbif/inst/vign/cache/tzone_79cc573f89fb1f83f4ac3d4e3e621884.rdb |only finbif-0.3.0/finbif/inst/vign/cache/tzone_79cc573f89fb1f83f4ac3d4e3e621884.rdx |only finbif-0.3.0/finbif/inst/vign/finbif.Rmd | 87 finbif-0.3.0/finbif/inst/vign/finbif.md | 367 - finbif-0.3.0/finbif/inst/vign/v02_occurrence_data.Rmd |only finbif-0.3.0/finbif/inst/vign/v02_occurrence_data.md |only finbif-0.3.0/finbif/inst/vign/v03_selecting_variables.Rmd |only finbif-0.3.0/finbif/inst/vign/v03_selecting_variables.md |only finbif-0.3.0/finbif/inst/vign/v04_metadata.Rmd |only finbif-0.3.0/finbif/inst/vign/v04_metadata.md |only finbif-0.3.0/finbif/inst/vign/v05_filtering.Rmd |only finbif-0.3.0/finbif/inst/vign/v05_filtering.md |only finbif-0.3.0/finbif/inst/vign/v06_plotting.Rmd |only finbif-0.3.0/finbif/inst/vign/v06_plotting.md |only finbif-0.3.0/finbif/man/as.data.frame.finbif_records.Rd | 6 finbif-0.3.0/finbif/man/breaks_xy.Rd | 2 finbif-0.3.0/finbif/man/caching.Rd | 18 finbif-0.3.0/finbif/man/figures/location-filter-1.png |only finbif-0.3.0/finbif/man/figures/plot-finland-1.png |only finbif-0.3.0/finbif/man/figures/plot-occurrences-eval-1.png |only finbif-0.3.0/finbif/man/figures/plot-recent-obs-1.png |only finbif-0.3.0/finbif/man/filters.Rd | 44 finbif-0.3.0/finbif/man/finbif-package.Rd | 23 finbif-0.3.0/finbif/man/finbif_check_taxa.Rd | 1 finbif-0.3.0/finbif/man/finbif_clear_cache.Rd | 4 finbif-0.3.0/finbif/man/finbif_collections.Rd | 1 finbif-0.3.0/finbif/man/finbif_informal_groups.Rd | 1 finbif-0.3.0/finbif/man/finbif_metadata.Rd | 1 finbif-0.3.0/finbif/man/finbif_occurrence.Rd | 42 finbif-0.3.0/finbif/man/finbif_records.Rd | 15 finbif-0.3.0/finbif/man/finbif_request_token.Rd | 1 finbif-0.3.0/finbif/man/finbif_taxa.Rd | 1 finbif-0.3.0/finbif/man/finland_map.Rd | 6 finbif-0.3.0/finbif/man/to_dwc.Rd |only finbif-0.3.0/finbif/man/variables.Rd | 36 finbif-0.3.0/finbif/tests/api-dev-cassettes/api_get.yml |only finbif-0.3.0/finbif/tests/api-dev-cassettes/dates.yml |only finbif-0.3.0/finbif/tests/api-dev-cassettes/finbif_check_taxa.yml | 52 finbif-0.3.0/finbif/tests/api-dev-cassettes/finbif_collections.yml | 112 finbif-0.3.0/finbif/tests/api-dev-cassettes/finbif_occurrence.yml | 415 + finbif-0.3.0/finbif/tests/api-dev-cassettes/finbif_records.yml | 112 finbif-0.3.0/finbif/tests/api-dev-cassettes/finbif_taxa.yml | 28 finbif-0.3.0/finbif/tests/cassettes/api_get.yml |only finbif-0.3.0/finbif/tests/cassettes/dates.yml |only finbif-0.3.0/finbif/tests/cassettes/finbif_collections.yml | 108 finbif-0.3.0/finbif/tests/cassettes/finbif_occurrence.yml | 596 -- finbif-0.3.0/finbif/tests/cassettes/finbif_records.yml | 132 finbif-0.3.0/finbif/tests/figs/querying-finbif-occurrence-data/occurrence-plot-dev.svg | 2266 ++++----- finbif-0.3.0/finbif/tests/figs/querying-finbif-occurrence-data/occurrence-plot.svg | 2276 +++++----- finbif-0.3.0/finbif/tests/testthat/helper-finbif.R | 4 finbif-0.3.0/finbif/tests/testthat/test-finbif_api_get.R | 8 finbif-0.3.0/finbif/tests/testthat/test-finbif_clear_cache.R | 2 finbif-0.3.0/finbif/tests/testthat/test-finbif_collections.R | 9 finbif-0.3.0/finbif/tests/testthat/test-finbif_coords.R | 4 finbif-0.3.0/finbif/tests/testthat/test-finbif_dates.R | 116 finbif-0.3.0/finbif/tests/testthat/test-finbif_occurrence.R | 50 finbif-0.3.0/finbif/tests/testthat/test-finbif_records.R | 6 finbif-0.3.0/finbif/tests/testthat/test-finbif_token.R | 16 finbif-0.3.0/finbif/tests/testthat/test-utils.R | 10 finbif-0.3.0/finbif/tests/testthat/test-zzz-finbif.R | 2 finbif-0.3.0/finbif/vignettes/finbif.Rmd | 367 - finbif-0.3.0/finbif/vignettes/v02_occurrence_data.Rmd |only finbif-0.3.0/finbif/vignettes/v03_selecting_variables.Rmd |only finbif-0.3.0/finbif/vignettes/v04_metadata.Rmd |only finbif-0.3.0/finbif/vignettes/v05_filtering.Rmd |only finbif-0.3.0/finbif/vignettes/v06_plotting.Rmd |only 355 files changed, 5287 insertions(+), 4864 deletions(-)
Title: k-Prototypes Clustering for Mixed Variable-Type Data
Description: Functions to perform k-prototypes partitioning clustering for
mixed variable-type data according to Z.Huang (1998): Extensions to the k-Means
Algorithm for Clustering Large Data Sets with Categorical Variables, Data Mining
and Knowledge Discovery 2, 283-304, <DOI:10.1023/A:1009769707641>.
Author: Gero Szepannek [aut, cre], Rabea Aschenbruck [aut]
Maintainer: Gero Szepannek <gero.szepannek@web.de>
Diff between clustMixType versions 0.2-2 dated 2020-03-07 and 0.2-5 dated 2020-04-23
clustMixType-0.2-2/clustMixType/man/cindex_kproto.Rd |only clustMixType-0.2-2/clustMixType/man/dunn_kproto.Rd |only clustMixType-0.2-2/clustMixType/man/gamma_kproto.Rd |only clustMixType-0.2-2/clustMixType/man/gplus_kproto.Rd |only clustMixType-0.2-2/clustMixType/man/mcclain_kproto.Rd |only clustMixType-0.2-2/clustMixType/man/ptbiserial_kproto.Rd |only clustMixType-0.2-2/clustMixType/man/silhouette_kproto.Rd |only clustMixType-0.2-2/clustMixType/man/tau_kproto.Rd |only clustMixType-0.2-5/clustMixType/DESCRIPTION | 10 clustMixType-0.2-5/clustMixType/MD5 | 24 clustMixType-0.2-5/clustMixType/NAMESPACE | 9 clustMixType-0.2-5/clustMixType/NEWS |only clustMixType-0.2-5/clustMixType/R/clustervalidation.R | 1228 +++------- clustMixType-0.2-5/clustMixType/R/kprototypes.R | 26 clustMixType-0.2-5/clustMixType/man/kproto.Rd | 13 clustMixType-0.2-5/clustMixType/man/validation_kproto.Rd |only clustMixType-0.2-5/clustMixType/tests/testthat/test_basics.R | 8 clustMixType-0.2-5/clustMixType/tests/testthat/test_clustervalidation.R | 196 - 18 files changed, 543 insertions(+), 971 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-07-29 1.2
2016-07-24 1.1
2016-06-15 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-23 0.6.2
2019-12-04 0.6.1
2019-11-26 0.6.0
2019-11-11 0.5.0
2019-10-15 0.4.0
2019-10-07 0.3.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-03-18 1.2.2
2018-10-21 1.2.1
2018-05-30 1.2.0
2018-01-26 1.1.1
2017-06-28 1.1.0
2016-11-01 1.0.0
2015-11-18 0.9.1
2015-09-23 0.9.0
2014-02-23 0.3.1
2013-12-09 0.3
2013-03-28 0.2
2012-09-25 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-31 0.1.3
2019-06-05 0.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-03 0.6
2019-05-14 0.5
2018-12-21 0.4
2018-06-15 0.3.0.1
2018-06-02 0.3
2017-11-08 0.2.1
2017-09-12 0.2
2017-04-19 0.1.1
2017-02-01 0.1
Title: Parametric Cure Model Estimation
Description: Contains functions for estimating generalized parametric mixture and non-mixture cure models, loss of lifetime, mean residual lifetime, and crude event probabilities.
Author: Lasse Hjort Jakobsen [aut, cre],
Mark Clements [cph]
Maintainer: Lasse Hjort Jakobsen <lahja@dcm.aau.dk>
Diff between cuRe versions 1.0.0 dated 2020-01-13 and 1.0.1 dated 2020-04-23
DESCRIPTION | 16 +++++++++------- MD5 | 16 ++++++++-------- NAMESPACE | 2 +- R/calc.Crude.quantile.R | 2 +- R/calc.LL.quantile.R | 4 ++-- R/calc.cure.quantile.R | 2 +- R/fit.cure.model.R | 21 +++++++++++++++++++-- R/loglikelihoods.R | 21 +++++++++++++++++++++ R/predict.cm.R | 3 ++- 9 files changed, 64 insertions(+), 23 deletions(-)
Title: Animal Movement Tools
Description: Manage and analyze animal movement data. The functionality of 'amt' includes methods to calculate track statistics (e.g. step lengths, speed, or turning angles), prepare data for fitting habitat selection analyses (resource selection functions and step-selection functions <doi:10.1890/04-0953> and integrated step-selection functions <doi:10.1111/2041-210X.12528>), and simulation of space-use from fitted step-selection functions <doi:10.1002/ecs2.1771>.
Author: Johannes Signer [aut, cre],
Bjoern Reineking [ctb],
Brian Smith [ctb],
Ulrike Schlaegel [ctb],
Scott LaPoint [dtc]
Maintainer: Johannes Signer <jsigner@gwdg.de>
Diff between amt versions 0.0.9 dated 2020-03-30 and 0.1.0 dated 2020-04-23
DESCRIPTION | 8 MD5 | 181 +++++++++--------- NAMESPACE | 19 + NEWS.md | 20 +- R/RcppExports.R | 4 R/coercion.R | 2 R/distributions.R | 2 R/extract_covariates.R | 2 R/fit_ctmm.R | 2 R/fit_logit.R | 2 R/hr_akde.R | 6 R/hr_area.R | 18 - R/hr_documentation.R | 4 R/hr_isopleths.R | 14 - R/hr_kde.R | 95 ++++++++- R/hr_locoh.R | 2 R/hr_mcp.R | 9 R/hr_overlap.R |only R/hr_plot.R |only R/hr_to_sf.R | 39 +++ R/hr_ud.R |only R/movement_metrics.R | 2 R/od.R | 2 R/random_steps.R | 39 +++ R/simulate_ud.R | 2 R/steps.R | 4 R/track_methods.R | 2 build/partial.rdb |binary inst/WORDLIST |only inst/doc/faq.R | 12 - inst/doc/faq.Rmd | 2 inst/doc/faq.html | 32 +-- inst/doc/p1_getting_started.R | 42 ++-- inst/doc/p1_getting_started.Rmd | 18 - inst/doc/p1_getting_started.html | 179 ++++++------------ inst/doc/p3_rsf.R | 24 +- inst/doc/p3_rsf.Rmd | 2 inst/doc/p3_rsf.html | 188 ++++++------------- inst/doc/p4_SSF.R | 26 +- inst/doc/p4_SSF.html | 374 ++++++++++++++------------------------ inst/doc/p5_other_packages.R | 12 - inst/doc/p5_other_packages.Rmd | 2 inst/doc/p5_other_packages.html | 296 ++++++++++-------------------- inst/tinytest/test_random_steps.R |only man/amt_fisher.Rd | 6 man/amt_fisher_lu.Rd | 4 man/append_x1.Rd | 4 man/as_track.Rd | 2 man/available_distr.Rd | 8 man/bbox.Rd | 12 - man/centroid.Rd | 2 man/coercion.Rd | 6 man/convert_angles.Rd | 2 man/cum_ud.Rd | 4 man/deer.Rd | 6 man/dispersal_kernel.Rd | 35 ++- man/dist_cent.Rd | 9 man/distributions.Rd | 18 - man/extract_covariates.Rd | 36 ++- man/filter_min_n_burst.Rd | 2 man/fit_clogit.Rd | 8 man/fit_ctmm.Rd | 2 man/fit_distr.Rd | 6 man/fit_logit.Rd | 6 man/helper.Rd | 9 man/hr.Rd | 49 ++-- man/hr_kde_ref_scaled.Rd |only man/hr_overlaps.Rd |only man/hr_to_sf.Rd | 13 - man/inspect.Rd | 4 man/log_rss.Rd | 8 man/movement_metrics.Rd | 2 man/od.Rd | 28 +- man/params.Rd | 2 man/plot.log_rss.Rd | 12 - man/plot_sl.Rd | 14 - man/random_points.Rd | 24 +- man/random_steps.Rd | 38 ++- man/reexports.Rd | 4 man/sh.Rd | 6 man/sh_forest.Rd | 4 man/sim_ud.Rd | 23 +- man/speed.Rd | 4 man/steps.Rd | 44 ++-- man/summarize_sampling_rate.Rd | 11 - man/time_of_day.Rd | 14 - man/track.Rd | 48 +++- man/track_resample.Rd | 3 man/transform_coords.Rd | 4 src/RcppExports.cpp | 21 -- src/rand_steps.cpp | 2 vignettes/faq.Rmd | 2 vignettes/p1_getting_started.Rmd | 18 - vignettes/p3_rsf.Rmd | 2 vignettes/p5_other_packages.Rmd | 2 95 files changed, 1092 insertions(+), 1190 deletions(-)
Title: Multicriteria Risk Management using Zero-Sum Games with
Vector-Valued Payoffs that are Probability Distributions
Description: Construction and analysis of multivalued zero-sum matrix games over the abstract space of probability distributions, which describe the losses in each scenario of defense vs. attack action. The distributions can be compiled directly from expert opinions or other empirical data (insofar available). The package implements the methods put forth in the EU project HyRiM (Hybrid Risk Management for Utility Networks), FP7 EU Project Number 608090. The method has been published in Rass, S., König, S., Schauer, S., 2016. Decisions with Uncertain Consequences-A Total Ordering on Loss-Distributions. PLoS ONE 11, e0168583. <doi:10.1371/journal.pone.0168583>, and applied for advanced persistent thread modeling in Rass, S., König, S., Schauer, S., 2017. Defending Against Advanced Persistent Threats Using Game-Theory. PLoS ONE 12, e0168675. <doi:10.1371/journal.pone.0168675>. A volume covering the wider range of aspects of risk management, partially based on the theory implemented in the package is the book edited by S. Rass and S. Schauer, 2018. Game Theory for Security and Risk Management: From Theory to Practice. Springer, <doi:10.1007/978-3-319-75268-6>, ISBN 978-3-319-75267-9.
Author: Stefan Rass, Sandra Koenig, Ali Alshawish
Maintainer: Austrian Institute of Technology <hyrim@ait.ac.at>
Diff between HyRiM versions 1.0.3 dated 2019-11-18 and 2.0.0 dated 2020-04-23
DESCRIPTION | 12 - MD5 | 48 ++-- NAMESPACE | 7 NEWS | 22 + R/disappointmentRate.R | 61 ++++- R/lossDistribution.R | 8 R/mgss.R | 508 +++++++++++++++---------------------------- R/mosg.R | 44 +++ R/plot.mosg.R | 36 ++- R/print.mosg.R | 10 R/print.mosg.equilibrium.R | 23 + R/summary.mosg.equilibrium.R | 69 ++--- R/utils.R |only R/z[.mosg.R |only R/z[_-.mosg.R |only build/partial.rdb |binary build/vignette.rds |binary inst/CITATION | 5 inst/doc/vignette.pdf |binary man/disappointmentRate.Rd | 43 ++- man/lossDistribution.Rd | 39 ++- man/mgss.Rd | 61 +++-- man/mosg.Rd | 38 ++- man/mosg.equilibrium.Rd | 10 man/preference.Rd | 2 man/z[.mosg.Rd |only vignettes/package-paper.pdf |binary 27 files changed, 562 insertions(+), 484 deletions(-)
Title: Computation and Plots of Influence Functions for Risk and
Performance Measures
Description: Computes the influence functions time series of the returns for the risk and
performance measures as mentioned in Zhang and Martin (2017)
<https://ssrn.com/abstract=2747179> as well as Chen and Martin (2018)
<https://ssrn.com/abstract=3085672>. Also evaluates estimators influence
functions at a set of parameter values and plots them to display the shapes of
the influence functions.
Author: Anthony Christidis <anthony.christidis@stat.ubc.ca>,
Shengyu Zhang <syzhang@uw.edu>,
Douglas Martin <doug@amath.washington.edu>
Maintainer: Anthony Christidis <anthony.christidis@stat.ubc.ca>
Diff between RPEIF versions 1.0.7 dated 2020-03-16 and 1.0.8 dated 2020-04-23
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- NEWS.md | 5 ++++- inst/doc/RPEIFVignette.pdf |binary 4 files changed, 11 insertions(+), 8 deletions(-)
Title: XML-RPC Interface to NEOS
Description: Within this package the XML-RPC API to NEOS <https://neos-server.org/neos/> is implemented. This enables the user to pass optimization problems to NEOS and retrieve results within R.
Author: Bernhard Pfaff [aut, cre],
Duncan Temple Lang [ctb] (included XMLRPC package, hosted at
http://www.omegahat.net/XMLRPC/; BSD license.)
Maintainer: Bernhard Pfaff <bernhard@pfaffikus.de>
Diff between rneos versions 0.3-2 dated 2017-01-03 and 0.4-0 dated 2020-04-23
DESCRIPTION | 20 +++--- MD5 | 94 +++++++++++++++--------------- NAMESPACE | 9 +- R/AllClasses.R | 8 ++ R/NemailHelp.R | 18 ++--- R/NgetFinalResults.R | 39 +++++------- R/NgetFinalResultsNonBlocking.R | 39 +++++------- R/NgetIntermediateResults.R | 59 +++++++++--------- R/NgetIntermediateResultsNonBlocking.R | 61 +++++++++---------- R/NgetJobInfo.R | 26 +++----- R/NgetJobStatus.R | 26 +++----- R/NgetSolverTemplate.R | 27 ++++---- R/Nhelp.R | 18 ++--- R/NkillJob.R | 35 +++++------ R/NlistAllSolvers.R | 19 ++---- R/NlistCategories.R | 24 +++---- R/NlistSolversInCategory.R | 34 +++++----- R/Nping.R | 18 ++--- R/NprintQueue.R | 18 ++--- R/NsubmitJob.R | 25 +++---- R/Nversion.R | 20 ++---- R/Nwelcome.R | 18 ++--- R/XMLRPC.R |only man/CreateNeosComm.Rd | 6 - man/CreateXmlString.Rd | 4 - man/NemailHelp.Rd | 4 - man/NeosAns-class.Rd | 4 - man/NeosJob-class.Rd | 5 - man/NeosOff-class.Rd | 4 - man/NeosXml-class.Rd | 4 - man/NgetFinalResults.Rd | 9 -- man/NgetFinalResultsNonBlocking.Rd | 4 - man/NgetIntermediateResults.Rd | 4 - man/NgetIntermediateResultsNonBlocking.Rd | 4 - man/NgetJobInfo.Rd | 4 - man/NgetJobStatus.Rd | 5 - man/NgetSolverTemplate.Rd | 5 - man/Nhelp.Rd | 4 - man/NkillJob.Rd | 4 - man/NlistAllSolvers.Rd | 4 - man/NlistCategories.Rd | 4 - man/NlistServersInCategory.Rd | 5 - man/Nping.Rd | 5 - man/NprintQueue.Rd | 4 - man/NsubmitJob.Rd | 4 - man/Nversion.Rd | 4 - man/Nwelcome.Rd | 5 - man/XMLRPCServer.Rd |only man/rpc.serialize.Rd |only man/xml.rpc.Rd |only 50 files changed, 333 insertions(+), 431 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-02-12 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-05-06 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-09-23 0.1.2
Title: Functional Time Series Analysis
Description: Functions for visualizing, modeling, forecasting and hypothesis testing of functional time series.
Author: Rob Hyndman [aut] (<https://orcid.org/0000-0002-2140-5352>),
Han Lin Shang [aut, cre, cph] (<https://orcid.org/0000-0003-1769-6430>)
Maintainer: Han Lin Shang <hanlin.shang@anu.edu.au>
Diff between ftsa versions 5.5 dated 2019-04-21 and 5.6 dated 2020-04-23
ftsa-5.5/ftsa/R/DataPostProc.R |only ftsa-5.5/ftsa/R/isfe.fts.R |only ftsa-5.5/ftsa/R/loadSgnU.R |only ftsa-5.6/ftsa/ChangeLog | 19 ++++++++++++------- ftsa-5.6/ftsa/DESCRIPTION | 10 +++++----- ftsa-5.6/ftsa/MD5 | 18 +++++++++--------- ftsa-5.6/ftsa/R/DataPostProc.r |only ftsa-5.6/ftsa/R/farforecast.R | 16 +++++++++------- ftsa-5.6/ftsa/R/fdpca.R | 4 +++- ftsa-5.6/ftsa/R/isfe.fts.r |only ftsa-5.6/ftsa/R/loadSgnU.r |only ftsa-5.6/ftsa/R/rapca.R | 3 ++- ftsa-5.6/ftsa/man/farforecast.Rd | 13 +++++++------ 13 files changed, 47 insertions(+), 36 deletions(-)
Title: Interface to 'Azure Resource Manager'
Description: A lightweight but powerful R interface to the 'Azure Resource Manager' REST API. The package exposes a comprehensive class framework and related tools for creating, updating and deleting 'Azure' resource groups, resources and templates. While 'AzureRMR' can be used to manage any 'Azure' service, it can also be extended by other packages to provide extra functionality for specific services. Part of the 'AzureR' family of packages.
Author: Hong Ooi [aut, cre],
Microsoft [cph]
Maintainer: Hong Ooi <hongooi@microsoft.com>
Diff between AzureRMR versions 2.3.1 dated 2020-01-27 and 2.3.2 dated 2020-04-23
DESCRIPTION | 8 - MD5 | 66 +++++----- NEWS.md | 4 R/az_login.R | 2 R/az_resgroup.R | 2 R/az_resource.R | 2 R/az_rm.R | 23 +++ R/az_subscription.R | 2 R/call_azure_rm.R | 4 build/vignette.rds |binary inst/doc/extend.html | 20 +-- inst/doc/intro.html | 22 ++- inst/doc/parallel.html | 22 ++- inst/doc/sp.html | 22 ++- inst/doc/template.html | 22 ++- man/az_resource.Rd | 10 - man/az_resource_group.Rd | 10 - man/az_rm.Rd | 24 ++- man/az_role_assignment.Rd | 6 man/az_role_definition.Rd | 6 man/az_subscription.Rd | 8 - man/az_template.Rd | 6 man/azure_login.Rd | 214 ++++++++++++++++----------------- man/build_template.Rd | 272 +++++++++++++++++++++---------------------- man/call_azure.Rd | 108 ++++++++--------- man/format.Rd | 44 +++--- man/info.Rd | 70 +++++------ man/lock.Rd | 156 ++++++++++++------------ man/pool.Rd | 166 +++++++++++++------------- man/rbac.Rd | 188 ++++++++++++++--------------- man/reexports.Rd | 46 +++---- man/utils.Rd | 91 +++++++------- tests/testthat/test00_pool.R | 6 tests/testthat/test01_auth.R | 7 + 34 files changed, 857 insertions(+), 802 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-08-05 0.3.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-05-08 0.7
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-07-02 0.7-5
2016-09-29 0.5-3
2014-10-20 0.3-6
2013-11-04 0.2-4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-02-03 0.6-7
2016-09-14 0.6-6
2013-07-05 0.6-5.1
2013-03-12 0.6-5
2010-04-07 0.6-4
2009-10-12 0.6-3
2007-11-20 0.6-2.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-09 1.0.0
2019-08-27 0.9.7
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2011-12-28 1.0.2
2010-01-07 1.0.1
2010-01-05 1.0