Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-03-21 1.5
2016-08-25 1.4
2016-04-19 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-12 0.1.1
Title: Easy Handling Discrete Time Markov Chains
Description: Functions and S4 methods to create and manage discrete time Markov
chains more easily. In addition functions to perform statistical (fitting
and drawing random variates) and probabilistic (analysis of their structural
proprieties) analysis are provided.
Author: Giorgio Alfredo Spedicato [aut, cre]
(<https://orcid.org/0000-0002-0315-8888>),
Tae Seung Kang [aut],
Sai Bhargav Yalamanchi [aut],
Mildenberger Thoralf [ctb] (<https://orcid.org/0000-0001-7242-1873>),
Deepak Yadav [aut],
Ignacio Cordón [aut] (<https://orcid.org/0000-0002-3152-0231>),
Vandit Jain [ctb],
Toni Giorgino [ctb] (<https://orcid.org/0000-0001-6449-0596>),
Richèl J.C. Bilderbeek [ctb] (<https://orcid.org/0000-0003-1107-7049>)
Maintainer: Giorgio Alfredo Spedicato <spedicato_giorgio@yahoo.it>
Diff between markovchain versions 0.8.4 dated 2020-03-12 and 0.8.4.1 dated 2020-05-03
ChangeLog | 2 DESCRIPTION | 16 MD5 | 161 ++++----- NAMESPACE | 2 NEWS | 4 R/classesAndMethods.R | 9 R/sysdata.rda |binary build/vignette.rds |binary data/blanden.rda |binary data/craigsendi.rda |binary data/holson.rda |binary data/kullback.rda |binary data/preproglucacon.rda |binary data/rain.rda |binary data/sales.rda |binary data/tm_abs.rda |binary inst/doc/an_introduction_to_markovchain_package.pdf |binary inst/doc/gsoc_2017_additions.pdf |binary inst/doc/higher_order_markov_chains.pdf |binary man/ExpectedTime.Rd | 82 ++-- man/HigherOrderMarkovChain-class.Rd | 16 man/absorptionProbabilities.Rd | 76 ++-- man/blanden.Rd | 56 +-- man/committorAB.Rd | 78 ++-- man/conditionalDistribution.Rd | 78 ++-- man/craigsendi.Rd | 66 ++- man/ctmc-class.Rd | 144 ++++---- man/ctmcFit.Rd | 94 ++--- man/expectedRewards.Rd | 78 ++-- man/expectedRewardsBeforeHittingA.Rd | 70 ++-- man/firstPassage.Rd | 82 ++-- man/firstPassageMultiple.Rd | 90 ++--- man/fitHighOrderMultivarMC.Rd | 74 ++-- man/fitHigherOrder.Rd | 88 ++--- man/freq2Generator.Rd | 78 ++-- man/generatorToTransitionMatrix.Rd | 74 ++-- man/getName.Rd | 60 +-- man/hittingProbabilities.Rd | 70 ++-- man/holson.Rd | 84 ++-- man/hommc-class.Rd | 88 ++--- man/hommc-show.Rd | 28 - man/ictmc-class.Rd | 44 +- man/impreciseProbabilityatT.Rd | 78 ++-- man/inferHyperparam.Rd | 114 +++--- man/is.CTMCirreducible.Rd | 70 ++-- man/is.TimeReversible.Rd | 74 ++-- man/is.accessible.Rd | 94 ++--- man/is.irreducible.Rd | 78 ++-- man/is.regular.Rd | 80 ++-- man/kullback.Rd | 28 - man/markovchain-class.Rd | 340 ++++++++++---------- man/markovchain.Rd | 106 +++--- man/markovchainFit.Rd | 236 ++++++------- man/markovchainList-class.Rd | 160 ++++----- man/markovchainListFit.Rd | 80 ++-- man/markovchainSequence.Rd | 110 +++--- man/meanAbsorptionTime.Rd | 70 ++-- man/meanFirstPassageTime.Rd | 114 +++--- man/meanNumVisits.Rd | 74 ++-- man/meanRecurrenceTime.Rd | 74 ++-- man/multinomialConfidenceIntervals.Rd | 78 ++-- man/names.Rd | 26 - man/noofVisitsDist.Rd | 74 ++-- man/predictHommc.Rd | 62 +-- man/predictiveDistribution.Rd | 112 +++--- man/preproglucacon.Rd | 58 +-- man/priorDistribution.Rd | 112 +++--- man/probabilityatT.Rd | 86 ++--- man/rain.Rd | 58 +-- man/rctmc.Rd | 116 +++--- man/rmarkovchain.Rd | 170 +++++----- man/sales.Rd | 52 +-- man/setName.Rd | 64 +-- man/states.Rd | 80 ++-- man/statisticalTests.Rd | 174 +++++----- man/steadyStates.Rd | 82 ++-- man/structuralAnalysis.Rd | 208 ++++++------ man/tm_abs.Rd | 52 +-- man/transition2Generator.Rd | 62 +-- man/transitionProbability.Rd | 88 ++--- tests/testthat/Rplots.pdf |only tests/testthat/testPlot.R | 14 82 files changed, 2866 insertions(+), 2834 deletions(-)
Title: Statistical Methods for Phenology Analysis in Temperate Fruit
Trees
Description: The phenology of plants (i.e. the timing of their annual life
phases) depends on climatic cues. For temperate trees and many other plants,
spring phases, such as leaf emergence and flowering, have been found to result
from the effects of both cool (chilling) conditions and heat. Fruit tree
scientists (pomologists) have developed some metrics to quantify chilling
and heat (e.g. see Luedeling (2012) <doi.org/10.1016/j.scienta.2012.07.011>).
'chillR' contains functions for processing temperature records into
chilling (Chilling Hours, Utah Chill Units and Chill Portions) and heat units
(Growing Degree Hours). Regarding chilling metrics, Chill Portions are often
considered the most promising, but they are difficult to calculate. This package
makes it easy. 'chillR' also contains procedures for conducting a PLS analysis
relating phenological dates (e.g. bloom dates) to either mean temperatures or
mean chill and heat accumulation rates, based on long-term weather and phenology
records (Luedeling and Gassner (2012) <doi.org/10.1016/j.agrformet.2011.10.020>).
As of version 0.65, it also includes functions for generating weather
scenarios with a weather generator, for conducting climate change analyses
for temperature-based climatic metrics and for plotting results from such
analyses. Since version 0.70, 'chillR' contains a function for interpolating
hourly temperature records.
Author: Eike Luedeling
Maintainer: Eike Luedeling <eike@eikeluedeling.com>
Diff between chillR versions 0.70.21 dated 2019-11-05 and 0.70.24 dated 2020-05-03
DESCRIPTION | 8 - MD5 | 32 +++--- R/RMSEP_RPD.R | 28 ++++- R/bloom_prediction2.R | 6 - R/bloom_prediction3.R | 29 ++++- R/getClimateWizardData.R | 186 +++++++++++++++++++------------------- R/handle_gsod.R | 2 R/make_hourly_temps.R | 5 - R/temperature_generation.R | 15 +-- inst/doc/hourly_temperatures.R | 50 +++++----- inst/doc/hourly_temperatures.html | 7 - man/RMSEP.Rd | 4 man/RPD.Rd | 4 man/RPIQ.Rd | 4 man/bloom_prediction3.Rd | 4 man/handle_gsod.Rd | 2 man/temperature_generation.Rd | 15 +-- 17 files changed, 220 insertions(+), 181 deletions(-)
Title: eXtreme RuleFit
Description: An implementation of the RuleFit algorithm as described in Friedman & Popescu
(2008) <doi:10.1214/07-AOAS148>. eXtreme Gradient Boosting ('XGBoost') is used
to build rules, and 'glmnet' is used to fit a sparse linear model on the raw and rule features. The result
is a model that learns similarly to a tree ensemble, while often offering improved interpretability
and achieving improved scoring runtime in live applications. Several algorithms for
reducing rule complexity are provided, most notably hyperrectangle de-overlapping. All algorithms scale to
several million rows and support sparse representations to handle tens of thousands of dimensions.
Author: Karl Holub [aut, cre]
Maintainer: Karl Holub <karljholub@gmail.com>
Diff between xrf versions 0.1.2 dated 2019-04-28 and 0.2.0 dated 2020-05-03
DESCRIPTION | 14 +- MD5 | 28 ++--- R/glmnot.R | 43 ++++---- R/hyperrectangle_overlap.R | 90 +++++++++--------- R/xrf.R | 199 +++++++++++++++++++++------------------- README.md | 63 ++++++++---- man/coef.xrf.Rd | 2 man/model.matrix.xrf.Rd | 2 man/predict.xrf.Rd | 12 +- man/print.xrf.Rd | 2 man/summary.xrf.Rd | 2 man/xrf.Rd | 4 man/xrf.formula.Rd | 21 ++-- tests/testthat/test_deoverlap.R | 42 ++++---- tests/testthat/test_model.R | 55 ++++++++--- 15 files changed, 329 insertions(+), 250 deletions(-)
Title: Tools for Defensive Programming
Description: Tools for defensive programming, inspired by 'purrr' mappers and
based on 'rlang'.'attempt' extends and facilitates defensive programming by
providing a consistent grammar, and provides a set of easy to use functions
for common tests and conditions. 'attempt' only depends on 'rlang', and
focuses on speed, so it can be easily integrated in other functions and
used in data analysis.
Author: Colin Fay [aut, cre] (<https://orcid.org/0000-0001-7343-1846>)
Maintainer: Colin Fay <contact@colinfay.me>
Diff between attempt versions 0.3.0 dated 2019-04-08 and 0.3.1 dated 2020-05-03
attempt-0.3.0/attempt/inst/doc/tests_and_coverage.R |only attempt-0.3.0/attempt/inst/doc/tests_and_coverage.Rmd |only attempt-0.3.0/attempt/inst/doc/tests_and_coverage.html |only attempt-0.3.0/attempt/man/discretly.Rd |only attempt-0.3.0/attempt/vignettes/tests_and_coverage.Rmd |only attempt-0.3.1/attempt/DESCRIPTION | 8 attempt-0.3.1/attempt/MD5 | 54 +-- attempt-0.3.1/attempt/NAMESPACE | 1 attempt-0.3.1/attempt/NEWS.md | 6 attempt-0.3.1/attempt/R/adverbs.R | 6 attempt-0.3.1/attempt/README.md | 48 -- attempt-0.3.1/attempt/build/vignette.rds |binary attempt-0.3.1/attempt/inst/doc/a_intro_attempt.R | 6 attempt-0.3.1/attempt/inst/doc/a_intro_attempt.Rmd | 10 attempt-0.3.1/attempt/inst/doc/a_intro_attempt.html | 59 +-- attempt-0.3.1/attempt/inst/doc/b_try_catch.R | 235 ++++++------- attempt-0.3.1/attempt/inst/doc/b_try_catch.Rmd | 9 attempt-0.3.1/attempt/inst/doc/b_try_catch.html | 291 ++++++----------- attempt-0.3.1/attempt/inst/doc/c_adverbs.R | 65 +-- attempt-0.3.1/attempt/inst/doc/c_adverbs.Rmd | 7 attempt-0.3.1/attempt/inst/doc/c_adverbs.html | 104 ++---- attempt-0.3.1/attempt/inst/doc/d_if.R | 12 attempt-0.3.1/attempt/inst/doc/d_if.html | 85 ++-- attempt-0.3.1/attempt/inst/doc/e_conditions.R | 153 ++++---- attempt-0.3.1/attempt/inst/doc/e_conditions.Rmd | 15 attempt-0.3.1/attempt/inst/doc/e_conditions.html | 216 +++++------- attempt-0.3.1/attempt/man/discreetly.Rd |only attempt-0.3.1/attempt/vignettes/a_intro_attempt.Rmd | 10 attempt-0.3.1/attempt/vignettes/b_try_catch.Rmd | 9 attempt-0.3.1/attempt/vignettes/c_adverbs.Rmd | 7 attempt-0.3.1/attempt/vignettes/e_conditions.Rmd | 15 31 files changed, 664 insertions(+), 767 deletions(-)
Title: Nonlinear Time Series Analysis
Description: Functions for nonlinear time series analysis. This package permits
the computation of the most-used nonlinear statistics/algorithms
including generalized correlation dimension, information dimension,
largest Lyapunov exponent, sample entropy and Recurrence
Quantification Analysis (RQA), among others. Basic routines
for surrogate data testing are also included. Part of this work
was based on the book "Nonlinear time series analysis" by
Holger Kantz and Thomas Schreiber (ISBN: 9780521529020).
Author: Constantino A. Garcia [aut, cre],
Gunther Sawitzki [ctb]
Maintainer: Constantino A. Garcia <constantino.garciama@ceu.es>
Diff between nonlinearTseries versions 0.2.8 dated 2020-03-22 and 0.2.9 dated 2020-05-03
nonlinearTseries-0.2.8/nonlinearTseries/R/nonlinearityTest.R |only nonlinearTseries-0.2.9/nonlinearTseries/DESCRIPTION | 11 +-- nonlinearTseries-0.2.9/nonlinearTseries/MD5 | 25 ++++---- nonlinearTseries-0.2.9/nonlinearTseries/NAMESPACE | 14 ++++ nonlinearTseries-0.2.9/nonlinearTseries/R/getMinimumEmbeddingDimension.R | 31 +++++++--- nonlinearTseries-0.2.9/nonlinearTseries/R/nonlinearTests.R |only nonlinearTseries-0.2.9/nonlinearTseries/R/utils.R | 4 - nonlinearTseries-0.2.9/nonlinearTseries/inst/COPYRIGHT | 7 +- nonlinearTseries-0.2.9/nonlinearTseries/inst/doc/nonlinearTseries_quickstart.html | 8 +- nonlinearTseries-0.2.9/nonlinearTseries/man/estimateEmbeddingDim.Rd | 9 ++ nonlinearTseries-0.2.9/nonlinearTseries/man/keenanTest.Rd |only nonlinearTseries-0.2.9/nonlinearTseries/man/mcleodLiTest.Rd |only nonlinearTseries-0.2.9/nonlinearTseries/man/nonlinearityTest.Rd | 17 +++-- nonlinearTseries-0.2.9/nonlinearTseries/man/thresholdTest.Rd |only nonlinearTseries-0.2.9/nonlinearTseries/man/tsayTest.Rd |only nonlinearTseries-0.2.9/nonlinearTseries/src/information_dimension.cpp | 2 nonlinearTseries-0.2.9/nonlinearTseries/tests/testthat/Rplots.pdf |only 17 files changed, 86 insertions(+), 42 deletions(-)
More information about nonlinearTseries at CRAN
Permanent link
Title: Extreme Value Analysis
Description: Functions for performing extreme value analysis.
Author: Eric Gilleland
Maintainer: Eric Gilleland <ericg@ucar.edu>
Diff between extRemes versions 2.0-11 dated 2019-11-29 and 2.0-12 dated 2020-05-03
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/xtibber.R | 7 ++++--- man/extRemes-package.Rd | 2 +- 4 files changed, 12 insertions(+), 11 deletions(-)
Title: Interface for the Analysis of Running, Cycling and Swimming Data
from GPS-Enabled Tracking Devices
Description: Provides an integrated user interface and workflow for
the analysis of running, cycling and swimming data from GPS-enabled
tracking devices through the 'trackeR' <https://CRAN.R-project.org/package=trackeR> R package.
Author: Ioannis Kosmidis [aut, cre] (<https://orcid.org/0000-0003-1556-0302>),
Robin Hornak [aut]
Maintainer: Ioannis Kosmidis <ioannis.kosmidis@warwick.ac.uk>
Diff between trackeRapp versions 1.0 dated 2019-04-12 and 1.1 dated 2020-05-03
DESCRIPTION | 17 +++++--- MD5 | 24 ++++++------ NAMESPACE | 1 NEWS.md | 10 +++++ R/helpers.R | 64 +++++++++++++++----------------- R/plot_timeline.R | 2 - R/plot_workouts.R | 2 - R/trackeRapp.R | 12 +++++- inst/shiny/server.R | 54 ++++++++++++--------------- inst/shiny/ui.R | 17 ++++---- inst/shiny/www/hex_trackeRapp.svg | 64 +++++++++++++++++++++++--------- inst/shiny/www/text_trackeRapp.svg | 74 +++++++++++++++++++++++++------------ man/trackeRapp.Rd | 9 ++++ 13 files changed, 215 insertions(+), 135 deletions(-)
Title: Time Delay Estimation for Stochastic Time Series of
Gravitationally Lensed Quasars
Description: We provide a toolbox to estimate the time delay between the brightness time series of gravitationally lensed quasar images via Bayesian and profile likelihood approaches. The model is based on a state-space representation for irregularly observed time series data generated from a latent continuous-time Ornstein-Uhlenbeck process. Our Bayesian method adopts scientifically motivated hyper-prior distributions and a Metropolis-Hastings within Gibbs sampler, producing posterior samples of the model parameters that include the time delay. A profile likelihood of the time delay is a simple approximation to the marginal posterior distribution of the time delay. Both Bayesian and profile likelihood approaches complement each other, producing almost identical results; the Bayesian way is more principled but the profile likelihood is easier to implement. A new functionality is added in version 1.0.9 for estimating the time delay between doubly-lensed light curves observed in two bands.
Author: Hyungsuk Tak, Kaisey Mandel, David A. van Dyk, Vinay L. Kashyap, Xiao-Li Meng, Aneta Siemiginowska, and Zhirui Hu
Maintainer: Hyungsuk Tak <hyungsuk.tak@gmail.com>
Diff between timedelay versions 1.0.8 dated 2018-05-16 and 1.0.9 dated 2020-05-03
DESCRIPTION | 16 +++++++----- MD5 | 20 ++++++++++------ NAMESPACE | 1 R/bayesian.R | 6 ++-- R/bayesian.multiband.R |only data/simple.band1.RData |only data/simple.band2.RData |only man/bayesian.Rd | 47 +++++++++++++++++++------------------- man/bayesian.multiband.Rd |only man/entirelogprofilelikelihood.Rd | 36 ++++++++++++----------------- man/simple.band1.Rd |only man/simple.band2.Rd |only man/timedelay-internal.Rd | 6 ++++ man/timedelay-package.Rd | 11 ++++---- 14 files changed, 78 insertions(+), 65 deletions(-)
Title: Hierarchical Multiple Imputation
Description: Runs single level and multilevel imputation models. The user just has to pass the data to the main function and, optionally, his analysis model. Basically the package then translates this analysis model into commands to impute the data according to it with functions from 'mice', 'MCMCglmm' or routines build for this package.
Author: Matthias Speidel [aut, cre] (Munich, Germany),
Joerg Drechsler [aut] (Institute for Employment Research, Nuremberg,
Germany),
Shahab Jolani [aut] (Maastricht University, Maastricht, The
Netherlands)
Maintainer: Matthias Speidel <matthias.speidel@googlemail.com>
Diff between hmi versions 0.9.17 dated 2019-11-16 and 0.9.18 dated 2020-05-03
DESCRIPTION | 9 ++++----- MD5 | 8 ++++---- R/hmi_imp_roundedcont.R | 30 ++++++++++-------------------- build/vignette.rds |binary inst/doc/myvignette.html | 37 ++++++++++++++++--------------------- 5 files changed, 34 insertions(+), 50 deletions(-)
Title: Load and Analyze Live Data from the CoViD-19 Pandemic
Description: Load and analyze updated time series worldwide data of reported cases for the Novel CoronaVirus Disease (CoViD-19) from the Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE) data repository <https://github.com/CSSEGISandData/COVID-19>. The datasets are available in two main modalities, as a time series sequences and aggregated for the last day with greater spatial resolution. Several analysis, visualization and modelling functions are available in the package that will allow the user to compute and visualize total number of cases, total number of changes and growth rate globally or for an specific geographical location, while at the same time generating models using these trends; generate interactive visualizations and generate Susceptible-Infected-Recovered (SIR) model for the disease spread.
Author: Marcelo Ponce [aut, cre]
Maintainer: Marcelo Ponce <mponce@scinet.utoronto.ca>
Diff between covid19.analytics versions 1.0.1 dated 2020-04-13 and 1.1 dated 2020-05-03
covid19.analytics-1.0.1/covid19.analytics/inst/extdata/03-27-2020.csv |only covid19.analytics-1.0.1/covid19.analytics/inst/extdata/bckups |only covid19.analytics-1.1/covid19.analytics/DESCRIPTION | 12 covid19.analytics-1.1/covid19.analytics/MD5 | 117 covid19.analytics-1.1/covid19.analytics/NAMESPACE | 13 covid19.analytics-1.1/covid19.analytics/NEWS | 10 covid19.analytics-1.1/covid19.analytics/R/aux_stats.R | 25 covid19.analytics-1.1/covid19.analytics/R/aux_utils.R | 4 covid19.analytics-1.1/covid19.analytics/R/covid19.R | 247 + covid19.analytics-1.1/covid19.analytics/R/covid19_anal.R | 322 + covid19.analytics-1.1/covid19.analytics/R/covid19_checks.R |only covid19.analytics-1.1/covid19.analytics/R/covid19_plts.R | 34 covid19.analytics-1.1/covid19.analytics/R/covid19_seq.R | 2 covid19.analytics-1.1/covid19.analytics/R/covid19_trends.R |only covid19.analytics-1.1/covid19.analytics/README.md | 325 + covid19.analytics-1.1/covid19.analytics/build/vignette.rds |binary covid19.analytics-1.1/covid19.analytics/inst/doc/covid19.analytics.html | 1750 +++++----- covid19.analytics-1.1/covid19.analytics/inst/extdata/05-01-2020.csv |only covid19.analytics-1.1/covid19.analytics/inst/extdata/covid19_Toronto.xlsx |only covid19.analytics-1.1/covid19.analytics/inst/extdata/time_series_covid19_confirmed_US.csv |only covid19.analytics-1.1/covid19.analytics/inst/extdata/time_series_covid19_confirmed_global.csv | 517 +- covid19.analytics-1.1/covid19.analytics/inst/extdata/time_series_covid19_deaths_US.csv |only covid19.analytics-1.1/covid19.analytics/inst/extdata/time_series_covid19_deaths_global.csv | 517 +- covid19.analytics-1.1/covid19.analytics/inst/extdata/time_series_covid19_recovered_global.csv | 489 +- covid19.analytics-1.1/covid19.analytics/inst/extdata/update_DS.sh | 3 covid19.analytics-1.1/covid19.analytics/man/consistency.check.Rd |only covid19.analytics-1.1/covid19.analytics/man/covid19.JHU.data.Rd |only covid19.analytics-1.1/covid19.analytics/man/covid19.Toronto.data.Rd |only covid19.analytics-1.1/covid19.analytics/man/covid19.US.data.Rd |only covid19.analytics-1.1/covid19.analytics/man/covid19.data.Rd | 9 covid19.analytics-1.1/covid19.analytics/man/data.checks.Rd |only covid19.analytics-1.1/covid19.analytics/man/figures/Japan_confirmed.pdf |binary covid19.analytics-1.1/covid19.analytics/man/figures/Japan_deaths.pdf |binary covid19.analytics-1.1/covid19.analytics/man/figures/Japan_recovered.pdf |binary covid19.analytics-1.1/covid19.analytics/man/figures/covid19-SummaryReport.pdf |binary covid19.analytics-1.1/covid19.analytics/man/figures/covid19-SummaryReport.txt | 342 - 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covid19.analytics-1.1/covid19.analytics/vignettes/man/figures/gr-changes_Canada.pdf |binary covid19.analytics-1.1/covid19.analytics/vignettes/man/figures/gr-changes_Germany.pdf |binary covid19.analytics-1.1/covid19.analytics/vignettes/man/figures/gr-changes_Hubei.pdf |binary covid19.analytics-1.1/covid19.analytics/vignettes/man/figures/gr-changes_Italy.pdf |binary covid19.analytics-1.1/covid19.analytics/vignettes/man/figures/trendTor.pdf |only covid19.analytics-1.1/covid19.analytics/vignettes/man/integrity.check.Rd |only covid19.analytics-1.1/covid19.analytics/vignettes/man/itrends.Rd |only covid19.analytics-1.1/covid19.analytics/vignettes/man/live.map.Rd | 6 covid19.analytics-1.1/covid19.analytics/vignettes/man/mtrends.Rd |only covid19.analytics-1.1/covid19.analytics/vignettes/man/report.summary.Rd | 3 covid19.analytics-1.1/covid19.analytics/vignettes/man/select.per.loc.Rd | 2 covid19.analytics-1.1/covid19.analytics/vignettes/man/single.trend.Rd |only 71 files changed, 3055 insertions(+), 2056 deletions(-)
More information about covid19.analytics at CRAN
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Title: Assessment of Regression Models Performance
Description: Utilities for computing measures to assess model quality,
which are not directly provided by R's 'base' or 'stats' packages. These
include e.g. measures like r-squared, intraclass correlation coefficient
(Nakagawa, Johnson & Schielzeth (2017) <doi:10.1098/rsif.2017.0213>),
root mean squared error or functions to check models for overdispersion,
singularity or zero-inflation and more. Functions apply to a large variety of
regression models, including generalized linear models, mixed effects models
and Bayesian models.
Author: Daniel Lüdecke [aut, cre] (<https://orcid.org/0000-0002-8895-3206>),
Dominique Makowski [aut, ctb] (<https://orcid.org/0000-0001-5375-9967>),
Philip Waggoner [aut, ctb] (<https://orcid.org/0000-0002-7825-7573>),
Indrajeet Patil [aut, ctb] (<https://orcid.org/0000-0003-1995-6531>)
Maintainer: Daniel Lüdecke <d.luedecke@uke.de>
Diff between performance versions 0.4.5 dated 2020-03-28 and 0.4.6 dated 2020-05-03
DESCRIPTION | 6 +- MD5 | 36 ++++++++-------- NAMESPACE | 13 ++++++ NEWS.md | 19 ++++++++ R/check_itemscale.R | 2 R/helpers.R | 6 ++ R/icc.R | 99 ++++++++++++++++++++++++++++++++++------------ R/model_performance.lm.R | 18 ++++++-- R/model_performance.rma.R | 2 R/performance_aicc.R | 10 ++++ R/performance_lrt.R | 79 ++++++++++++++++++++++++++---------- R/print-methods.R | 63 ++++++++++++++++++++++++++++- R/r2.R | 20 ++++++++- R/r2_coxsnell.R | 7 +++ R/r2_nakagawa.R | 71 ++++++++++++++++++++++++-------- build/partial.rdb |binary man/icc.Rd | 44 +++++++++++++------- man/r2.Rd | 2 man/r2_nakagawa.Rd | 8 +++ 19 files changed, 395 insertions(+), 110 deletions(-)
Title: Double Generalized Linear Models Extending Poisson Regression
Description: Model estimation, dispersion testing and diagnosis of hyper-Poisson
Saez-Castillo, A.J. and Conde-Sanchez, A. (2013)
<doi:10.1016/j.csda.2012.12.009> and Conway-Maxwell-Poisson Huang, A. (2017)
<doi:10.1177/1471082X17697749> regression models.
Author: Antonio Jose Saez-Castillo [aut],
Antonio Conde-Sanchez [aut],
Francisco Martinez [aut, cre]
Maintainer: Francisco Martinez <fmartin@ujaen.es>
Diff between DGLMExtPois versions 0.1.2 dated 2020-04-06 and 0.1.3 dated 2020-05-03
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS.md | 4 ++++ R/glm_hP.R | 2 +- 4 files changed, 11 insertions(+), 7 deletions(-)
Title: Provides Access to Git Repositories
Description: Interface to the 'libgit2' library, which is a pure C
implementation of the 'Git' core methods. Provides access to 'Git'
repositories to extract data and running some basic 'Git'
commands.
Author: See AUTHORS file.
Maintainer: Stefan Widgren <stefan.widgren@gmail.com>
Diff between git2r versions 0.26.0 dated 2019-06-29 and 0.27.1 dated 2020-05-03
DESCRIPTION | 11 MD5 | 475 ++++++++++++++++----------------- NAMESPACE | 1 NEWS | 41 ++ R/blame.R | 4 R/blob.R | 13 R/branch.R | 73 ++--- R/checkout.R | 26 - R/commit.R | 188 ++++++------- R/config.R | 8 R/contributions.R | 35 +- R/credential.R | 37 +- R/diff.R | 12 R/fetch.R | 13 R/git2r.R | 3 R/index.R | 34 +- R/merge.R | 13 R/note.R | 20 - R/odb.R | 28 + R/plot.R | 13 R/pull.R | 26 - R/punch_card.R | 6 R/push.R | 16 - R/reference.R | 8 R/reflog.R | 29 +- R/refspec.R | 6 R/repository.R | 116 ++++---- R/reset.R | 18 - R/revparse.R | 13 R/sha.R | 6 R/signature.R | 4 R/stash.R | 17 - R/status.R | 12 R/tag.R | 13 R/time.R | 75 +++-- R/tree.R | 23 - R/when.R | 25 + configure | 409 ++++++++++++---------------- configure.ac | 85 +++-- inst/CITATION | 4 man/add.Rd | 2 man/ahead_behind.Rd | 13 man/as.data.frame.git_repository.Rd | 16 - man/as.data.frame.git_tree.Rd | 12 man/as.list.git_tree.Rd | 2 man/blame.Rd | 4 man/blob_create.Rd | 3 man/branch_create.Rd | 14 man/branch_delete.Rd | 2 man/branch_get_upstream.Rd | 6 man/branch_remote_name.Rd | 6 man/branch_remote_url.Rd | 6 man/branch_rename.Rd | 6 man/branch_set_upstream.Rd | 6 man/branch_target.Rd | 6 man/branches.Rd | 6 man/checkout.Rd | 25 + man/clone.Rd | 34 +- man/commit.Rd | 16 - man/commits.Rd | 40 +- man/content.Rd | 2 man/contributions.Rd | 31 +- man/cred_env.Rd | 6 man/cred_ssh_key.Rd | 13 man/cred_token.Rd | 8 man/cred_user_pass.Rd | 6 man/default_signature.Rd | 4 man/descendant_of.Rd | 13 man/diff-methods.Rd | 41 ++ man/discover_repository.Rd | 6 man/fetch.Rd | 13 man/fetch_heads.Rd | 4 man/git2r.Rd | 3 man/git_time.Rd |only man/hash.Rd | 4 man/hashfile.Rd | 4 man/head.git_repository.Rd | 4 man/in_repository.Rd | 2 man/index_remove_bypath.Rd | 2 man/is_binary.Rd | 2 man/is_blob.Rd | 2 man/is_branch.Rd | 2 man/is_commit.Rd | 2 man/is_detached.Rd | 13 man/is_empty.Rd | 2 man/is_head.Rd | 2 man/is_local.Rd | 6 man/is_merge.Rd | 2 man/is_shallow.Rd | 22 - man/is_tag.Rd | 2 man/is_tree.Rd | 2 man/last_commit.Rd | 6 man/length.git_blob.Rd | 2 man/lookup.Rd | 14 man/lookup_commit.Rd | 6 man/ls_tree.Rd | 2 man/merge.Rd | 16 - man/merge_base.Rd | 2 man/note_create.Rd | 12 man/note_default_ref.Rd | 2 man/note_remove.Rd | 2 man/notes.Rd | 2 man/odb_blobs.Rd | 16 - man/odb_objects.Rd | 6 man/parents.Rd | 2 man/plot.git_repository.Rd | 8 man/print.git_reflog_entry.Rd | 2 man/pull.Rd | 24 - man/push.Rd | 23 + man/reexports.Rd | 2 man/references.Rd | 6 man/reflog.Rd | 22 - man/repository.Rd | 8 man/repository_head.Rd | 2 man/reset.Rd | 12 man/revparse_single.Rd | 13 man/rm_file.Rd | 7 man/sha.Rd | 6 man/ssh_path.Rd | 6 man/stash.Rd | 12 man/stash_apply.Rd | 2 man/stash_drop.Rd | 2 man/stash_list.Rd | 2 man/stash_pop.Rd | 2 man/status.Rd | 12 man/sub-.git_tree.Rd | 2 man/summary.git_repository.Rd | 2 man/summary.git_stash.Rd | 2 man/summary.git_tree.Rd | 2 man/tag.Rd | 12 man/tag_delete.Rd | 2 man/tags.Rd | 2 man/tree.Rd | 2 man/when.Rd | 21 + src/Makevars.win | 11 src/git2r.c | 11 src/git2r_arg.h | 4 src/git2r_blob.c | 6 src/git2r_branch.c | 2 src/git2r_clone.c | 4 src/git2r_cred.c | 38 +- src/git2r_cred.h | 5 src/git2r_deprecated.h | 26 + src/git2r_diff.c | 17 + src/git2r_merge.c | 4 src/git2r_odb.c | 2 src/git2r_remote.c | 6 src/git2r_revwalk.c | 25 + src/git2r_revwalk.h | 2 src/git2r_stash.c | 3 src/git2r_transfer.c | 7 src/git2r_transfer.h | 5 src/git2r_tree.c | 8 src/libgit2/include/git2/version.h | 4 src/libgit2/src/apply.c | 44 ++- src/libgit2/src/attrcache.c | 2 src/libgit2/src/blame.c | 2 src/libgit2/src/buffer.c | 21 - src/libgit2/src/cherrypick.c | 4 src/libgit2/src/commit_list.c | 8 src/libgit2/src/config.c | 9 src/libgit2/src/diff.c | 12 src/libgit2/src/diff_generate.c | 196 ++++++++----- src/libgit2/src/fetchhead.c | 38 ++ src/libgit2/src/filebuf.c | 14 src/libgit2/src/filebuf.h | 2 src/libgit2/src/fileops.c | 1 src/libgit2/src/global.c | 52 --- src/libgit2/src/global.h | 2 src/libgit2/src/ignore.c | 9 src/libgit2/src/integer.h | 28 + src/libgit2/src/iterator.c | 15 - src/libgit2/src/merge.c | 6 src/libgit2/src/netops.c | 29 ++ src/libgit2/src/netops.h | 3 src/libgit2/src/patch_generate.c | 2 src/libgit2/src/patch_parse.c | 124 ++++++-- src/libgit2/src/path.c | 150 ++++++++-- src/libgit2/src/path.h | 12 src/libgit2/src/refdb_fs.c | 5 src/libgit2/src/refs.c | 5 src/libgit2/src/repository.c | 11 src/libgit2/src/repository.h | 2 src/libgit2/src/revert.c | 4 src/libgit2/src/sysdir.c | 12 src/libgit2/src/transaction.c | 8 src/libgit2/src/transports/smart_pkt.c | 2 src/libgit2/src/transports/winhttp.c | 7 src/libgit2/src/unix/posix.h | 2 src/libgit2/src/xdiff/xdiffi.c | 2 tests/add-force.R | 39 +- tests/bare_repository.R | 8 tests/blame.R | 24 - tests/blob.R | 45 +-- tests/branch.R | 34 +- tests/bundle.R | 11 tests/checkout-named-branch.R | 42 +- tests/checkout.R | 26 - tests/checkout_branch.R | 18 - tests/checkout_commit.R | 10 tests/checkout_tag.R | 10 tests/clone_bare.R | 10 tests/clone_branch.R | 27 - tests/clone_checkout.R | 12 tests/commit.R | 30 +- tests/commits_path.R | 6 tests/config.R | 24 - tests/diff.R | 55 ++- tests/fast_forward_merge.R | 10 tests/fetch.R | 21 - tests/graph.R | 6 tests/index.R | 69 ++-- tests/invalid-conf-var.R | 10 tests/libgit2.R | 2 tests/ls_tree.R |only tests/merge.R | 32 -- tests/merge_named_branch.R | 29 -- tests/normal_merge.R | 8 tests/note.R | 58 ++-- tests/odb_blobs.R | 18 - tests/pre-process-path.R | 99 ++---- tests/pull.R | 35 +- tests/push-force.R | 27 - tests/push.R | 10 tests/reference.R | 13 tests/reflog.R | 12 tests/refspec.R | 16 - tests/remotes.R | 6 tests/remove.R | 15 - tests/repository.R | 15 - tests/reset.R | 81 ++--- tests/revparse.R | 6 tests/stash.R | 18 - tests/status.R | 75 ++--- tests/tag.R | 15 - tests/time.R | 37 ++ tests/tree.R | 13 tests/util |only tests/when.R | 24 + tools/version.c | 2 240 files changed, 2824 insertions(+), 2143 deletions(-)
Title: Analyze Cricket Performances Based on Data from Cricsheet
Description: Analyzing performances of cricketers and cricket teams
based on 'yaml' match data from Cricsheet <http://cricsheet.org>.
Author: Tinniam V Ganesh
Maintainer: Tinniam V Ganesh <tvganesh.85@gmail.com>
Diff between yorkr versions 0.0.7 dated 2017-02-18 and 0.0.8 dated 2020-05-03
yorkr-0.0.7/yorkr/man/teamBowlingScorecardAllOppnAllMatchesMain.Rd |only yorkr-0.0.8/yorkr/DESCRIPTION | 10 yorkr-0.0.8/yorkr/MD5 | 206 ++--- yorkr-0.0.8/yorkr/R/bowlerDeliveryWickets.R | 9 yorkr-0.0.8/yorkr/R/convertAllYaml2RDataframes.R | 105 ++ yorkr-0.0.8/yorkr/R/convertAllYaml2RDataframesT20.R | 105 +- yorkr-0.0.8/yorkr/R/convertYaml2RDataframe.R | 80 +- yorkr-0.0.8/yorkr/R/convertYaml2RDataframeT20.R | 79 +- yorkr-0.0.8/yorkr/R/getAllMatchesAllOpposition.R | 17 yorkr-0.0.8/yorkr/R/getAllMatchesBetweenTeams.R | 37 - yorkr-0.0.8/yorkr/R/getDeliveryWickets.R | 6 yorkr-0.0.8/yorkr/R/getTeamBattingDetails.R | 14 yorkr-0.0.8/yorkr/R/getTeamBowlingDetails.R | 13 yorkr-0.0.8/yorkr/R/parseYamlOver.R | 366 ++-------- yorkr-0.0.8/yorkr/R/plotWinLossBetweenTeams.R | 19 yorkr-0.0.8/yorkr/R/rankIPLBatsmen.R | 118 +-- yorkr-0.0.8/yorkr/R/rankIPLBowlers.R | 148 +--- yorkr-0.0.8/yorkr/R/rankODIBatsmen.R | 136 +-- yorkr-0.0.8/yorkr/R/rankODIBowlers.R | 157 +--- yorkr-0.0.8/yorkr/R/rankT20Batsmen.R | 139 +-- yorkr-0.0.8/yorkr/R/rankT20Bowlers.R | 167 +--- yorkr-0.0.8/yorkr/R/saveAllMatchesAllOpposition.R | 21 yorkr-0.0.8/yorkr/R/saveAllMatchesAllOppositionIPLT20.R | 16 yorkr-0.0.8/yorkr/R/saveAllMatchesBetween2IPLTeams.R | 17 yorkr-0.0.8/yorkr/R/saveAllMatchesBetweenTeams.R | 20 yorkr-0.0.8/yorkr/R/teamBowlingScorecardAllOppnAllMatches.R | 1 yorkr-0.0.8/yorkr/R/teamBowlingScorecardAllOppnAllMatchesMain.R | 3 yorkr-0.0.8/yorkr/README.md | 8 yorkr-0.0.8/yorkr/man/batsmanCumulativeAverageRuns.Rd | 7 yorkr-0.0.8/yorkr/man/batsmanCumulativeStrikeRate.Rd | 7 yorkr-0.0.8/yorkr/man/batsmanDismissals.Rd | 7 yorkr-0.0.8/yorkr/man/batsmanFoursSixes.Rd | 7 yorkr-0.0.8/yorkr/man/batsmanMovingAverage.Rd | 7 yorkr-0.0.8/yorkr/man/batsmanRunsAgainstOpposition.Rd | 7 yorkr-0.0.8/yorkr/man/batsmanRunsPredict.Rd | 7 yorkr-0.0.8/yorkr/man/batsmanRunsVenue.Rd | 7 yorkr-0.0.8/yorkr/man/batsmanRunsVsDeliveries.Rd | 7 yorkr-0.0.8/yorkr/man/batsmanRunsVsStrikeRate.Rd | 7 yorkr-0.0.8/yorkr/man/bowlerCumulativeAvgEconRate.Rd | 7 yorkr-0.0.8/yorkr/man/bowlerCumulativeAvgWickets.Rd | 7 yorkr-0.0.8/yorkr/man/bowlerDeliveryWickets.Rd | 7 yorkr-0.0.8/yorkr/man/bowlerMeanEconomyRate.Rd | 7 yorkr-0.0.8/yorkr/man/bowlerMeanRunsConceded.Rd | 7 yorkr-0.0.8/yorkr/man/bowlerMovingAverage.Rd | 7 yorkr-0.0.8/yorkr/man/bowlerWicketPlot.Rd | 7 yorkr-0.0.8/yorkr/man/bowlerWicketsAgainstOpposition.Rd | 7 yorkr-0.0.8/yorkr/man/bowlerWicketsVenue.Rd | 7 yorkr-0.0.8/yorkr/man/bowlerWktsPredict.Rd | 7 yorkr-0.0.8/yorkr/man/convertAllYaml2RDataframes.Rd | 13 yorkr-0.0.8/yorkr/man/convertAllYaml2RDataframesT20.Rd | 13 yorkr-0.0.8/yorkr/man/convertYaml2RDataframe.Rd | 7 yorkr-0.0.8/yorkr/man/convertYaml2RDataframeT20.Rd | 7 yorkr-0.0.8/yorkr/man/getAllMatchesAllOpposition.Rd | 13 yorkr-0.0.8/yorkr/man/getAllMatchesBetweenTeams.Rd | 13 yorkr-0.0.8/yorkr/man/getBatsmanDetails.Rd | 7 yorkr-0.0.8/yorkr/man/getBowlerWicketDetails.Rd | 7 yorkr-0.0.8/yorkr/man/getDeliveryWickets.Rd | 7 yorkr-0.0.8/yorkr/man/getMatchDetails.Rd | 7 yorkr-0.0.8/yorkr/man/getTeamBattingDetails.Rd | 13 yorkr-0.0.8/yorkr/man/getTeamBowlingDetails.Rd | 13 yorkr-0.0.8/yorkr/man/matchWormGraph.Rd | 7 yorkr-0.0.8/yorkr/man/parseYamlOver.Rd | 11 yorkr-0.0.8/yorkr/man/plotWinLossBetweenTeams.Rd | 7 yorkr-0.0.8/yorkr/man/rankIPLBatsmen.Rd | 14 yorkr-0.0.8/yorkr/man/rankIPLBowlers.Rd | 14 yorkr-0.0.8/yorkr/man/rankODIBatsmen.Rd | 14 yorkr-0.0.8/yorkr/man/rankODIBowlers.Rd | 14 yorkr-0.0.8/yorkr/man/rankT20Batsmen.Rd | 14 yorkr-0.0.8/yorkr/man/rankT20Bowlers.Rd | 14 yorkr-0.0.8/yorkr/man/saveAllMatchesAllOpposition.Rd | 15 yorkr-0.0.8/yorkr/man/saveAllMatchesAllOppositionIPLT20.Rd | 13 yorkr-0.0.8/yorkr/man/saveAllMatchesBetween2IPLTeams.Rd | 15 yorkr-0.0.8/yorkr/man/saveAllMatchesBetweenTeams.Rd | 15 yorkr-0.0.8/yorkr/man/specialProc.Rd | 7 yorkr-0.0.8/yorkr/man/teamBatsmenPartnershiOppnAllMatches.Rd | 7 yorkr-0.0.8/yorkr/man/teamBatsmenPartnershipAllOppnAllMatches.Rd | 7 yorkr-0.0.8/yorkr/man/teamBatsmenPartnershipAllOppnAllMatchesPlot.Rd | 7 yorkr-0.0.8/yorkr/man/teamBatsmenPartnershipMatch.Rd | 7 yorkr-0.0.8/yorkr/man/teamBatsmenPartnershipOppnAllMatchesChart.Rd | 7 yorkr-0.0.8/yorkr/man/teamBatsmenVsBowlersAllOppnAllMatchesPlot.Rd | 7 yorkr-0.0.8/yorkr/man/teamBatsmenVsBowlersAllOppnAllMatchesRept.Rd | 7 yorkr-0.0.8/yorkr/man/teamBatsmenVsBowlersMatch.Rd | 7 yorkr-0.0.8/yorkr/man/teamBatsmenVsBowlersOppnAllMatches.Rd | 7 yorkr-0.0.8/yorkr/man/teamBattingPerfDetails.Rd | 7 yorkr-0.0.8/yorkr/man/teamBattingScorecardAllOppnAllMatches.Rd | 7 yorkr-0.0.8/yorkr/man/teamBattingScorecardMatch.Rd | 7 yorkr-0.0.8/yorkr/man/teamBattingScorecardOppnAllMatches.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlersVsBatsmenAllOppnAllMatchesMain.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlersVsBatsmenAllOppnAllMatchesPlot.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlersVsBatsmenAllOppnAllMatchesRept.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlersVsBatsmenMatch.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlersVsBatsmenOppnAllMatches.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlersWicketKindOppnAllMatches.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlersWicketRunsOppnAllMatches.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlersWicketsOppnAllMatches.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlingPerfDetails.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlingPerfOppnAllMatches.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlingScoreCardAllOppnAllMatchesMain.Rd |only yorkr-0.0.8/yorkr/man/teamBowlingScorecardAllOppnAllMatches.Rd | 8 yorkr-0.0.8/yorkr/man/teamBowlingScorecardMatch.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlingWicketKindAllOppnAllMatches.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlingWicketKindMatch.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlingWicketMatch.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlingWicketRunsAllOppnAllMatches.Rd | 7 yorkr-0.0.8/yorkr/man/teamBowlingWicketRunsMatch.Rd | 7 105 files changed, 1267 insertions(+), 1395 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-08-16 0.2.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-12-08 2.3
2016-11-24 2.2
2016-09-11 2.1
2016-06-25 2.0
2016-05-26 1.9
2016-04-04 1.8
2015-12-09 1.7
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-06 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-12-02 1.7
2014-10-25 1.6
2014-04-08 1.5
2013-08-23 1.4
2013-08-15 1.3
2013-06-22 1.2
2012-09-19 1.01
2012-09-16 1.0
Title: Time Series Analysis
Description: Contains R functions and datasets detailed in the book
"Time Series Analysis with Applications in R (second edition)" by Jonathan Cryer and Kung-Sik Chan.
Author: Kung-Sik Chan, Brian Ripley
Maintainer: ORPHANED
Diff between TSA versions 1.2 dated 2018-06-30 and 1.2.1 dated 2020-05-03
DESCRIPTION | 14 ++++++++++---- MD5 | 6 +++--- R/spec.R | 1 + man/gBox.Rd | 8 +++----- 4 files changed, 17 insertions(+), 12 deletions(-)
Title: Error Handling Made Easy
Description: Set of tools to facilitate package development and make R a more user-friendly place. Mostly for developers (or anyone who writes/shares functions). Provides a simple, powerful and flexible way to check the arguments passed to functions.
The developer can easily describe the type of argument needed. If the user provides a wrong argument, then an informative error message is prompted with the requested type and the problem clearly stated--saving the user a lot of time in debugging.
Author: Laurent Berge [aut, cre]
Maintainer: Laurent Berge <laurent.berge@uni.lu>
Diff between dreamerr versions 1.0.0 dated 2020-04-15 and 1.1.0 dated 2020-05-03
DESCRIPTION | 10 MD5 | 38 +- NAMESPACE | 5 NEWS.md | 43 +++ R/check_arg.R | 465 ++++++++++++++++++++++++------------ R/check_dreamerr_calls.R | 109 ++++++-- R/misc_funs.R | 419 +++++++++++++++++++++++++++++++- README.md | 12 build/vignette.rds |binary inst/doc/dreamerr_introduction.R | 20 - inst/doc/dreamerr_introduction.Rmd | 12 inst/doc/dreamerr_introduction.html | 32 +- man/check_arg.Rd | 118 ++++++--- man/enumerate_items.Rd | 20 + man/package_stats.Rd |only man/set_check.Rd |only man/set_up.Rd |only man/sfill.Rd |only man/signif_plus.Rd | 2 man/stop_up.Rd | 2 man/validate_dots.Rd | 21 + vignettes/dreamerr_introduction.Rmd | 12 22 files changed, 1041 insertions(+), 299 deletions(-)
Title: Fault Trees for Risk and Reliability Analysis
Description: Construction, calculation and display of fault trees. Methods derived from Clifton A. Ericson II (2005, ISBN: 9780471739425) <DOI:10.1002/0471739421>, Antoine Rauzy (1993) <DOI:10.1016/0951-8320(93)90060-C>, Tim Bedford and Roger Cooke (2012, ISBN: 9780511813597) <DOI:10.1017/CBO9780511813597>, Nikolaos Limnios, (2007, ISBN: 9780470612484) <DOI: 10.1002/9780470612484>.
Author: David Silkworth [aut],
Jacob Ormerod [cre],
OpenReliability.org [cph]
Maintainer: Jacob Ormerod <jake@openreliability.org>
Diff between FaultTree versions 0.99.4 dated 2020-03-20 and 0.99.5 dated 2020-05-03
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- src/probability.cpp | 6 +++++- 3 files changed, 11 insertions(+), 7 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-07-13 2.1.1
2019-03-12 2.1.0
2019-03-06 2.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-01-24 0.2.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-05-31 2.0.2
2017-02-07 2.0.1
2017-02-06 2.0.0
2016-02-01 1.0.1
2015-11-08 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-09-15 2.0
2015-03-10 1.5
2013-04-04 1.4
2012-10-03 1.3.3
2012-09-17 1.3.2
2012-06-04 1.3.1
2012-03-26 1.3
2012-02-06 1.2.1
2011-06-01 1.2
2010-03-10 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-04-24 0.1.2
2018-06-25 0.1.1
2018-03-03 0.1.0
2016-10-05 0.0.2
2016-06-13 0.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-05-05 2.2.0
2019-03-06 0.0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-01-11 0.6-3.1
2015-11-12 0.6-3
2015-02-09 0.6-2
2014-12-10 0.6-1
2014-09-18 0.5-1
2014-09-18 0.5-2
2012-09-06 0.4-0
2011-10-27 0.3-0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-02-03 1.0.2
2017-07-08 1.0.1
2016-09-16 1.0.0
Title: Sustainable Transport Planning
Description: Tools for transport planning with an emphasis on spatial transport
data and non-motorized modes. Enables common transport planning tasks including:
downloading and cleaning transport datasets; creating geographic "desire lines"
from origin-destination (OD) data; route assignment, locally and via
interfaces to routing services such as <http://cyclestreets.net/>;
calculation of route segment attributes such as bearing and aggregate flow;
and 'travel watershed' analysis.
See Lovelace and Ellison (2018) <doi:10.32614/RJ-2018-053>.
Author: Robin Lovelace [aut, cre] (<https://orcid.org/0000-0001-5679-6536>),
Richard Ellison [aut],
Malcolm Morgan [aut] (<https://orcid.org/0000-0002-9488-9183>),
Barry Rowlingson [ctb] (Author of overline),
Nick Bearman [ctb] (Co-author of gclip),
Nikolai Berkoff [ctb] (Co-author of line2route),
Scott Chamberlain [rev] (Scott reviewed the package for rOpenSci, see
https://github.com/ropensci/onboarding/issues/10),
Mark Padgham [ctb],
Andrea Gilardi [ctb] (<https://orcid.org/0000-0002-9424-7439>)
Maintainer: Robin Lovelace <rob00x@gmail.com>
Diff between stplanr versions 0.5.2 dated 2020-04-06 and 0.6.0 dated 2020-05-03
stplanr-0.5.2/stplanr/R/aggregate_funs.R |only stplanr-0.5.2/stplanr/R/radiate.R |only stplanr-0.5.2/stplanr/R/routes.R |only stplanr-0.6.0/stplanr/DESCRIPTION | 10 stplanr-0.6.0/stplanr/MD5 | 115 +- stplanr-0.6.0/stplanr/NAMESPACE | 9 stplanr-0.6.0/stplanr/NEWS.md | 26 stplanr-0.6.0/stplanr/R/SpatialLinesNetwork.R | 49 - stplanr-0.6.0/stplanr/R/data.R | 28 stplanr-0.6.0/stplanr/R/deprecated.R | 479 ++++++++++ stplanr-0.6.0/stplanr/R/geo_projected.R | 40 stplanr-0.6.0/stplanr/R/line_via.R | 14 stplanr-0.6.0/stplanr/R/od-funs.R | 155 +-- stplanr-0.6.0/stplanr/R/overline.R | 4 stplanr-0.6.0/stplanr/R/route.R | 239 +++- stplanr-0.6.0/stplanr/R/route_cyclestreets.R |only stplanr-0.6.0/stplanr/R/route_funs.R |only stplanr-0.6.0/stplanr/R/slope.R |only stplanr-0.6.0/stplanr/R/stplanr-package.R | 2 stplanr-0.6.0/stplanr/R/toptail.R | 35 stplanr-0.6.0/stplanr/README.md | 32 stplanr-0.6.0/stplanr/build/vignette.rds |binary stplanr-0.6.0/stplanr/data/od_data_lines.rda |only stplanr-0.6.0/stplanr/data/od_data_routes.rda |only stplanr-0.6.0/stplanr/inst/doc/stplanr-od.html | 6 stplanr-0.6.0/stplanr/inst/doc/stplanr-parallel.R |only stplanr-0.6.0/stplanr/inst/doc/stplanr-parallel.Rmd |only stplanr-0.6.0/stplanr/inst/doc/stplanr-parallel.html |only stplanr-0.6.0/stplanr/inst/doc/stplanr-route-nets.html | 19 stplanr-0.6.0/stplanr/inst/doc/stplanr-routing.R | 4 stplanr-0.6.0/stplanr/inst/doc/stplanr-routing.Rmd | 2 stplanr-0.6.0/stplanr/inst/doc/stplanr.html | 75 - stplanr-0.6.0/stplanr/inst/sfnetwork-routing-test.R |only stplanr-0.6.0/stplanr/inst/test-SpatialLinesNetwork.R |only stplanr-0.6.0/stplanr/man/SpatialLinesNetwork.Rd | 2 stplanr-0.6.0/stplanr/man/api_pat.Rd | 2 stplanr-0.6.0/stplanr/man/figures/README-plot1-1.png |binary stplanr-0.6.0/stplanr/man/figures/README-routes-1.png |binary stplanr-0.6.0/stplanr/man/figures/README-unnamed-chunk-6-1.png |binary stplanr-0.6.0/stplanr/man/geo_buffer.Rd | 1 stplanr-0.6.0/stplanr/man/geo_select_aeq.Rd | 3 stplanr-0.6.0/stplanr/man/geo_toptail.Rd | 7 stplanr-0.6.0/stplanr/man/gsection.Rd | 2 stplanr-0.6.0/stplanr/man/line2route.Rd | 2 stplanr-0.6.0/stplanr/man/line2routeRetry.Rd | 1 stplanr-0.6.0/stplanr/man/line_via.Rd | 10 stplanr-0.6.0/stplanr/man/mats2line.Rd | 2 stplanr-0.6.0/stplanr/man/od_aggregate.Rd | 2 stplanr-0.6.0/stplanr/man/od_data_lines.Rd |only stplanr-0.6.0/stplanr/man/od_data_routes.Rd |only stplanr-0.6.0/stplanr/man/od_radiation.Rd | 4 stplanr-0.6.0/stplanr/man/overline.Rd | 2 stplanr-0.6.0/stplanr/man/route.Rd | 38 stplanr-0.6.0/stplanr/man/route_average_gradient.Rd |only stplanr-0.6.0/stplanr/man/route_cyclestreets.Rd | 12 stplanr-0.6.0/stplanr/man/route_dodgr.Rd | 25 stplanr-0.6.0/stplanr/man/route_graphhopper.Rd | 9 stplanr-0.6.0/stplanr/man/route_local.Rd | 1 stplanr-0.6.0/stplanr/man/route_rolling_average.Rd |only stplanr-0.6.0/stplanr/man/route_rolling_diff.Rd |only stplanr-0.6.0/stplanr/man/route_rolling_gradient.Rd |only stplanr-0.6.0/stplanr/man/route_sequential_dist.Rd |only stplanr-0.6.0/stplanr/man/route_slope_matrix.Rd |only stplanr-0.6.0/stplanr/man/route_slope_vector.Rd |only stplanr-0.6.0/stplanr/man/route_transportapi_public.Rd | 1 stplanr-0.6.0/stplanr/man/sp_aggregate.Rd | 2 stplanr-0.6.0/stplanr/man/sum_network_routes.Rd | 35 stplanr-0.6.0/stplanr/man/weightfield.Rd | 8 stplanr-0.6.0/stplanr/vignettes/stplanr-parallel.Rmd |only stplanr-0.6.0/stplanr/vignettes/stplanr-routing.Rmd | 2 70 files changed, 1125 insertions(+), 391 deletions(-)
Title: Determine the Number of States in Hidden Markov Models via
Marginal Likelihood
Description: Provide functions to make estimate the number of states for a hidden Markov
model (HMM) using marginal likelihood method proposed by the authors.
See the Manual.pdf file a detail description of all functions, and a detail tutorial.
Author: Yang Chen, Cheng-Der Fuh, Chu-Lan Kao, and S. C. Kou.
Maintainer: Chu-Lan Michael Kao <chulankao@gmail.com>
Diff between HMMmlselect versions 0.1.5 dated 2019-06-28 and 0.1.6 dated 2020-05-03
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- NAMESPACE | 2 +- R/HMMorderselectionfacility.R | 3 +++ 4 files changed, 11 insertions(+), 8 deletions(-)