Title: Nonparametric Regression
Description: Multiple and generalized nonparametric regression using smoothing spline ANOVA models and generalized additive models, as described in Helwig (2020) <doi:10.4135/9781526421036885885>. Includes support for Gaussian and non-Gaussian responses, smoothers for multiple types of predictors, interactions between smoothers of mixed types, and eight different methods for smoothing parameter selection.
Author: Nathaniel E. Helwig <helwig@umn.edu>
Maintainer: Nathaniel E. Helwig <helwig@umn.edu>
Diff between npreg versions 1.0-1 dated 2019-12-10 and 1.0-2 dated 2020-05-04
ChangeLog | 29 +++++++++++++++- DESCRIPTION | 10 ++--- MD5 | 38 ++++++++++----------- NAMESPACE | 4 +- R/plotci.R | 93 +++++++++++++++++++++++++++++++++++++++++++++-------- R/pred_rkhs.R | 6 +-- R/predict.gsm.R | 13 ++++++- R/predict.sm.R | 13 ++++++- R/summary.gsm.R | 9 +++-- man/gsm.Rd | 6 +-- man/nominal.Rd | 2 - man/ordinal.Rd | 2 - man/plotci.Rd | 6 +-- man/polynomial.Rd | 2 - man/predict.gsm.Rd | 2 - man/predict.sm.Rd | 2 - man/predict.ss.Rd | 2 - man/sm.Rd | 2 - man/ss.Rd | 2 - man/summary.Rd | 2 - 20 files changed, 181 insertions(+), 64 deletions(-)
Title: General-to-Specific (GETS) Modelling and Indicator Saturation
Methods
Description: Automated General-to-Specific (GETS) modelling of the mean and variance of a regression, and indicator saturation methods for detecting and testing for structural breaks in the mean.
Author: Genaro Sucarrat [aut, cre], Felix Pretis [aut], James Reade [aut]
Maintainer: Genaro Sucarrat <genaro.sucarrat@bi.no>
Diff between gets versions 0.22 dated 2020-04-01 and 0.23 dated 2020-05-04
DESCRIPTION | 8 ++++---- MD5 | 30 ++++++++++++++++-------------- NAMESPACE | 15 +++++++++++---- NEWS | 14 ++++++++++++++ R/gets-internal.R | 2 +- R/ols.R | 2 +- R/predict.arx.R | 2 +- R/printtex.R | 18 ++++++++++++------ R/stata.R | 4 ++-- R/toLatex.arx.R |only R/toLatex.gets.R |only data/hpdata.rda |binary data/infldata.rda |binary data/so2data.rda |binary data/sp500data.rda |binary man/gets-package.Rd | 4 ++-- man/printtex.Rd | 28 ++++++++++++++++++++-------- 17 files changed, 84 insertions(+), 43 deletions(-)
Title: Chaotic Time Series Analysis
Description: Chaos theory has been hailed as a revolution of thoughts and attracting ever increasing
attention of many scientists from diverse disciplines. Chaotic systems are nonlinear deterministic
dynamic systems which can behave like an erratic and apparently random motion. A relevant field
inside chaos theory and nonlinear time series analysis is the detection of a chaotic behaviour
from empirical time series data. One of the main features of chaos is the well known initial value
sensitivity property. Methods and techniques related to test the hypothesis of chaos try to quantify
the initial value sensitive property estimating the Lyapunov exponents. The DChaos package
provides different useful tools and efficient algorithms which test robustly the hypothesis of chaos
based on the Lyapunov exponent in order to know if the data generating process behind time series
behave chaotically or not.
Author: Julio E. Sandubete [aut, cre],
Lorenzo Escot [aut]
Maintainer: Julio E. Sandubete <jsandube@ucm.es>
Diff between DChaos versions 0.1-3 dated 2019-10-16 and 0.1-4 dated 2020-05-04
DChaos-0.1-3/DChaos/R/chaotic.ts.R |only DChaos-0.1-3/DChaos/R/infmutua.R |only DChaos-0.1-3/DChaos/R/jacobi.R |only DChaos-0.1-3/DChaos/man/henon.ts.Rd |only DChaos-0.1-3/DChaos/man/infmutua.Rd |only DChaos-0.1-3/DChaos/man/jacobi.Rd |only DChaos-0.1-3/DChaos/man/logistic.ts.Rd |only DChaos-0.1-3/DChaos/man/lorenz.ts.Rd |only DChaos-0.1-3/DChaos/man/rossler.ts.Rd |only DChaos-0.1-4/DChaos/DESCRIPTION | 24 DChaos-0.1-4/DChaos/MD5 | 45 - DChaos-0.1-4/DChaos/NAMESPACE | 27 DChaos-0.1-4/DChaos/R/embedding.R | 127 ++-- DChaos-0.1-4/DChaos/R/gauss.sim.R |only DChaos-0.1-4/DChaos/R/henon.sim.R |only DChaos-0.1-4/DChaos/R/jacobian.net.R |only DChaos-0.1-4/DChaos/R/logistic.sim.R |only DChaos-0.1-4/DChaos/R/lyapunov.R | 289 +++++----- DChaos-0.1-4/DChaos/R/lyapunov.max.R | 593 ++++++++++---------- DChaos-0.1-4/DChaos/R/lyapunov.spec.R | 808 +++++++++++++++------------- DChaos-0.1-4/DChaos/R/netfit.R |only DChaos-0.1-4/DChaos/R/rossler.sim.R |only DChaos-0.1-4/DChaos/R/summary.lyapunov.R |only DChaos-0.1-4/DChaos/R/w0.net.R |only DChaos-0.1-4/DChaos/man/embedding.Rd | 52 + DChaos-0.1-4/DChaos/man/gauss.sim.Rd |only DChaos-0.1-4/DChaos/man/henon.sim.Rd |only DChaos-0.1-4/DChaos/man/jacobian.net.Rd |only DChaos-0.1-4/DChaos/man/logistic.sim.Rd |only DChaos-0.1-4/DChaos/man/lyapunov.Rd | 86 +- DChaos-0.1-4/DChaos/man/lyapunov.max.Rd | 53 + DChaos-0.1-4/DChaos/man/lyapunov.spec.Rd | 51 - DChaos-0.1-4/DChaos/man/netfit.Rd |only DChaos-0.1-4/DChaos/man/rossler.sim.Rd |only DChaos-0.1-4/DChaos/man/summary.lyapunov.Rd |only DChaos-0.1-4/DChaos/man/w0.net.Rd |only 36 files changed, 1163 insertions(+), 992 deletions(-)
Title: Simple Wrapper for Computationally Expensive Functions
Description: This is a one-function package that will pass only unique values to a computationally-expensive function that returns an output of the same length as the input.
In importing and working with tidy data, it is common to have index columns, often including time stamps that are far from unique. Some functions to work with these such as text conversion to other variable types (e.g. as.POSIXct()), various grep()-based functions, and often the cut() function are relatively slow when working with tens of millions of rows or more.
Author: Stephen Froehlich
Maintainer: Stephen Froehlich <stephen.froehlich@gmail.com>
Diff between calcUnique versions 0.1.1 dated 2020-05-01 and 0.1.2 dated 2020-05-04
DESCRIPTION | 7 ++++--- MD5 | 3 ++- NEWS.md |only 3 files changed, 6 insertions(+), 4 deletions(-)
Title: Spatial Navigation Strategy Analysis
Description: A toolkit for the analysis of paths from spatial tracking experiments (such as the Morris water maze) and calculation of goal-finding strategies.
This package is centered on an approach using machine learning for path classification.
Author: Rupert Overall [aut, cre] (<https://orcid.org/0000-0002-3882-6073>)
Maintainer: Rupert Overall <rtrack@rupertoverall.net>
Diff between Rtrack versions 0.9.6 dated 2020-01-27 and 1.0.0 dated 2020-05-04
DESCRIPTION | 16 - MD5 | 41 ++-- NAMESPACE | 3 R/Rtrack.R | 41 ++-- R/calculate_metrics.R | 418 ++++++++++++++++++++++--------------------- R/call_strategy.R | 5 R/check_experiment.R | 14 - R/export_json.R | 6 R/export_results.R | 2 R/identify_track_format.R | 64 +++--- R/plot_strategies.R | 4 R/plot_variable.R | 9 R/read_experiment.R | 118 ++++++------ R/read_path.R | 163 ++++++++++++---- R/sysdata.rda |binary README.md | 4 inst/CITATION |only man/Rtrack.Rd | 35 +-- man/export_json.Rd | 2 man/identify_track_format.Rd | 5 man/read_experiment.Rd | 113 +++++------ man/read_path.Rd | 80 +++++--- 22 files changed, 638 insertions(+), 505 deletions(-)
Title: Wiener Process Distribution Functions
Description: Provides Wiener process distribution functions,
namely the Wiener first passage time density, CDF, quantile and random
functions. Additionally supplies a modelling function (wdm) and further
methods for the resulting object.
Author: Dominik Wabersich [aut, cre]
Maintainer: Dominik Wabersich <dominik.wabersich@gmail.com>
Diff between RWiener versions 1.3-2 dated 2020-02-28 and 1.3-3 dated 2020-05-04
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- src/qwiener.c | 2 -- src/rwiener.c | 2 +- 4 files changed, 8 insertions(+), 10 deletions(-)
Title: Paginate the HTML Output of R Markdown with CSS for Print
Description: Use the paged media properties in CSS and the JavaScript
library 'paged.js' to split the content of an HTML document into discrete
pages. Each page can have its page size, page numbers, margin boxes, and
running headers, etc. Applications of this package include books, letters,
reports, papers, business cards, resumes, and posters.
Author: Yihui Xie [aut, cre] (<https://orcid.org/0000-0003-0645-5666>),
Romain Lesur [aut, cph] (<https://orcid.org/0000-0002-0721-5595>),
Brent Thorne [aut] (<https://orcid.org/0000-0002-1099-3857>),
Christophe Dervieux [ctb] (<https://orcid.org/0000-0003-4474-2498>),
Atsushi Yasumoto [ctb] (<https://orcid.org/0000-0002-8335-495X>),
RStudio, PBC [cph],
Adam Hyde [ctb] (paged.js in resources/js/),
Min-Zhong Lu [ctb] (resume.css in resources/css/),
Zulko [ctb] (poster-relaxed.css in resources/css/)
Maintainer: Yihui Xie <xie@yihui.name>
Diff between pagedown versions 0.9 dated 2020-03-18 and 0.10 dated 2020-05-04
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS.md | 6 ++++++ inst/resources/css/resume.css | 10 ++++++++++ 4 files changed, 22 insertions(+), 6 deletions(-)
Title: Implement Download Buttons in 'rmarkdown'
Description: Implement download buttons in HTML output from 'rmarkdown' without the need for 'runtime:shiny'.
Author: Felipe Mattioni Maturana [aut, cre]
(<https://orcid.org/0000-0002-4221-6104>)
Maintainer: Felipe Mattioni Maturana <felipe.mattioni@med.uni-tuebingen.de>
Diff between downloadthis versions 0.1.3 dated 2020-04-14 and 0.2.0 dated 2020-05-04
DESCRIPTION | 10 - MD5 | 47 ++++-- NAMESPACE | 3 NEWS.md | 14 + R/download.R | 338 +++++++++++++++++++++++++++++++++++++++----- R/utils.R |only README.md | 82 ++++++++++ inst/assets |only inst/doc/button_types.html | 14 - inst/doc/customization.html | 5 inst/doc/downloadthis.R | 60 +++++++ inst/doc/downloadthis.Rmd | 85 ++++++++++- inst/doc/downloadthis.html | 105 ++++++++++++- inst/example |only man/download_dir.Rd |only man/download_file.Rd |only man/download_link.Rd |only man/download_this.Rd | 44 ++++- vignettes/downloadthis.Rmd | 85 ++++++++++- 19 files changed, 796 insertions(+), 96 deletions(-)
Title: General Package for Meta-Analysis
Description: User-friendly general package providing standard methods for meta-analysis and supporting Schwarzer, Carpenter, and Rücker <DOI:10.1007/978-3-319-21416-0>, "Meta-Analysis with R" (2015):
- fixed effect and random effects meta-analysis;
- several plots (forest, funnel, Galbraith / radial, L'Abbe, Baujat, bubble);
- statistical tests and trim-and-fill method to evaluate bias in meta-analysis;
- import data from 'RevMan 5';
- prediction interval, Hartung-Knapp method for random effects model;
- cumulative meta-analysis and leave-one-out meta-analysis;
- meta-regression;
- generalised linear mixed models;
- produce forest plot summarising several (subgroup) meta-analyses.
Author: Guido Schwarzer [cre, aut] (<https://orcid.org/0000-0001-6214-9087>)
Maintainer: Guido Schwarzer <sc@imbi.uni-freiburg.de>
Diff between meta versions 4.11-0 dated 2020-02-20 and 4.12-0 dated 2020-05-04
meta-4.11-0/meta/NEWS |only meta-4.12-0/meta/DESCRIPTION | 12 meta-4.12-0/meta/MD5 | 102 ++--- meta-4.12-0/meta/NAMESPACE | 2 meta-4.12-0/meta/NEWS.md |only meta-4.12-0/meta/R/catmeth.R | 10 meta-4.12-0/meta/R/drapery.R | 579 +++++++++++++++++++++++++--------- meta-4.12-0/meta/R/forest.R | 8 meta-4.12-0/meta/R/funnel.R | 27 + meta-4.12-0/meta/R/meta-internal.R | 31 + meta-4.12-0/meta/R/meta-package.R | 12 meta-4.12-0/meta/R/metabias.R | 8 meta-4.12-0/meta/R/metabin.R | 153 +++++++- meta-4.12-0/meta/R/metabind.R | 8 meta-4.12-0/meta/R/metacont.R | 38 +- meta-4.12-0/meta/R/metacor.R | 38 +- meta-4.12-0/meta/R/metacum.R | 22 - meta-4.12-0/meta/R/metagen.R | 79 ++++ meta-4.12-0/meta/R/metainc.R | 62 ++- meta-4.12-0/meta/R/metainf.R | 22 - meta-4.12-0/meta/R/metamean.R | 38 +- meta-4.12-0/meta/R/metaprop.R | 78 +++- meta-4.12-0/meta/R/metarate.R | 57 ++- meta-4.12-0/meta/R/print.meta.R | 3 meta-4.12-0/meta/R/read.rm5.R | 8 meta-4.12-0/meta/R/settings.meta.R | 72 +++- meta-4.12-0/meta/R/subgroup.R | 148 ++++---- meta-4.12-0/meta/R/summary.meta.R | 13 meta-4.12-0/meta/R/update.meta.R | 28 - meta-4.12-0/meta/man/Fleiss93.Rd | 6 meta-4.12-0/meta/man/Fleiss93cont.Rd | 6 meta-4.12-0/meta/man/Olkin95.Rd | 6 meta-4.12-0/meta/man/amlodipine.Rd | 6 meta-4.12-0/meta/man/cisapride.Rd | 6 meta-4.12-0/meta/man/drapery.Rd | 114 +++++- meta-4.12-0/meta/man/forest.Rd | 9 meta-4.12-0/meta/man/funnel.Rd | 11 meta-4.12-0/meta/man/meta-package.Rd | 8 meta-4.12-0/meta/man/metabin.Rd | 69 +++- meta-4.12-0/meta/man/metacont.Rd | 35 +- meta-4.12-0/meta/man/metacor.Rd | 35 +- meta-4.12-0/meta/man/metacum.Rd | 3 meta-4.12-0/meta/man/metagen.Rd | 39 ++ meta-4.12-0/meta/man/metainc.Rd | 40 +- meta-4.12-0/meta/man/metainf.Rd | 3 meta-4.12-0/meta/man/metamean.Rd | 35 +- meta-4.12-0/meta/man/metaprop.Rd | 35 +- meta-4.12-0/meta/man/metarate.Rd | 35 +- meta-4.12-0/meta/man/settings.meta.Rd | 38 +- meta-4.12-0/meta/man/smoking.Rd | 6 meta-4.12-0/meta/man/summary.meta.Rd | 8 meta-4.12-0/meta/man/update.meta.Rd | 5 meta-4.12-0/meta/man/woodyplants.Rd | 6 53 files changed, 1666 insertions(+), 556 deletions(-)
Title: Retrieving Acceptance Sampling Schemes
Description: Functions are included for recalling AQL (Acceptable Quality Level or Acceptance Quality Level)
Based single, double, and multiple attribute sampling plans from the Military Standard (MIL-STD-105E) - American
National Standards Institute/American Society for Quality (ANSI/ASQ Z1.4) tables and for retrieving variable
sampling plans from Military Standard (MIL-STD-414) - American National Standards Institute/American Society
for Quality (ANSI/ASQ Z1.9) tables. The sources for these tables are listed in the URL: field. Also included
are functions for computing the OC (Operating Characteristic) and ASN (Average Sample Number) coordinates
for the attribute plans it recalls, and functions for computing the estimated proportion nonconforming and
the maximum allowable proportion nonconforming for variable sampling plans. The MIL-STD AQL Sampling schemes
were the most used and copied set of standards in the world. They are intended to be used for sampling a stream
of lots, and were used in contract agreements between supplier and customer companies. When the US military
dropped support of MIL-STD 105E and 414, The American National Standards Institute (ANSI) and the International
Standards Organization (ISO) adopted the standard with few changes or no changes to the central tables. This
package is useful because its computer implementation of these tables duplicates that available in other
commercial software and subscription online calculators.
Author: John Lawson <lawsonjsl7net@gmail.com>
Maintainer: John Lawson <lawsonjsl7net@gmail.com>
Diff between AQLSchemes versions 1.6-9 dated 2020-04-17 and 1.7-1 dated 2020-05-04
DESCRIPTION | 10 +++++----- MD5 | 6 +++--- inst/doc/AQLSchemes.pdf |binary vignettes/AQLSchemes.Rmd | 6 ++++-- 4 files changed, 12 insertions(+), 10 deletions(-)
Title: Genome Interval Arithmetic in R
Description: Read and manipulate genome intervals and signals. Provides
functionality similar to command-line tool suites within R,
enabling interactive analysis and visualization of genome-scale data.
Author: Jay Hesselberth [aut, cre] (<https://orcid.org/0000-0002-6299-179X>),
Kent Riemondy [aut] (<https://orcid.org/0000-0003-0750-1273>),
RNA Bioscience Initiative [fnd]
Maintainer: Jay Hesselberth <jay.hesselberth@gmail.com>
Diff between valr versions 0.5.0 dated 2019-01-03 and 0.6.0 dated 2020-05-04
valr-0.5.0/valr/man/as.tbl_genome.Rd |only valr-0.5.0/valr/man/as.tbl_interval.Rd |only valr-0.5.0/valr/man/is.tbl_genome.Rd |only valr-0.5.0/valr/man/is.tbl_interval.Rd |only valr-0.5.0/valr/man/tbl_genome.Rd |only valr-0.5.0/valr/man/tbl_interval.Rd |only valr-0.6.0/valr/DESCRIPTION | 16 valr-0.6.0/valr/MD5 | 198 ++++---- valr-0.6.0/valr/NAMESPACE | 16 valr-0.6.0/valr/NEWS.md | 28 + valr-0.6.0/valr/R/bed12_to_exons.r | 4 valr-0.6.0/valr/R/bed_absdist.r | 39 - valr-0.6.0/valr/R/bed_closest.r | 26 - valr-0.6.0/valr/R/bed_cluster.r | 18 valr-0.6.0/valr/R/bed_complement.r | 24 - valr-0.6.0/valr/R/bed_coverage.R | 19 valr-0.6.0/valr/R/bed_fisher.r | 14 valr-0.6.0/valr/R/bed_flank.r | 22 valr-0.6.0/valr/R/bed_glyph.r | 8 valr-0.6.0/valr/R/bed_intersect.r | 25 - valr-0.6.0/valr/R/bed_jaccard.r | 8 valr-0.6.0/valr/R/bed_makewindows.r | 13 valr-0.6.0/valr/R/bed_map.r | 15 valr-0.6.0/valr/R/bed_merge.r | 41 - valr-0.6.0/valr/R/bed_partition.r | 23 - valr-0.6.0/valr/R/bed_projection.r | 14 valr-0.6.0/valr/R/bed_random.r | 23 - valr-0.6.0/valr/R/bed_reldist.r | 26 - valr-0.6.0/valr/R/bed_shift.r | 18 valr-0.6.0/valr/R/bed_shuffle.r | 28 - valr-0.6.0/valr/R/bed_slop.r | 14 valr-0.6.0/valr/R/bed_sort.r | 31 - valr-0.6.0/valr/R/bed_subtract.r | 21 valr-0.6.0/valr/R/bed_window.r | 22 valr-0.6.0/valr/R/features.r | 8 valr-0.6.0/valr/R/read_bed.r | 7 valr-0.6.0/valr/R/read_genome.r | 14 valr-0.6.0/valr/R/read_vcf.r | 2 valr-0.6.0/valr/R/spacing.r | 8 valr-0.6.0/valr/R/strands.r | 6 valr-0.6.0/valr/R/tbls.r | 285 ++++-------- valr-0.6.0/valr/R/utils.r | 48 -- valr-0.6.0/valr/README.md | 16 valr-0.6.0/valr/build/vignette.rds |binary valr-0.6.0/valr/inst/doc/valr.R | 46 +- valr-0.6.0/valr/inst/doc/valr.Rmd | 20 valr-0.6.0/valr/inst/doc/valr.html | 529 ++++++++++++------------ valr-0.6.0/valr/inst/example/bed_map.r | 4 valr-0.6.0/valr/inst/include/IntervalTree.h | 19 valr-0.6.0/valr/man/bed12_to_exons.Rd | 11 valr-0.6.0/valr/man/bed_absdist.Rd | 16 valr-0.6.0/valr/man/bed_closest.Rd | 27 - valr-0.6.0/valr/man/bed_cluster.Rd | 19 valr-0.6.0/valr/man/bed_complement.Rd | 25 - valr-0.6.0/valr/man/bed_coverage.Rd | 19 valr-0.6.0/valr/man/bed_fisher.Rd | 20 valr-0.6.0/valr/man/bed_flank.Rd | 38 + valr-0.6.0/valr/man/bed_glyph.Rd | 6 valr-0.6.0/valr/man/bed_intersect.Rd | 27 - valr-0.6.0/valr/man/bed_jaccard.Rd | 14 valr-0.6.0/valr/man/bed_makewindows.Rd | 25 - valr-0.6.0/valr/man/bed_map.Rd | 19 valr-0.6.0/valr/man/bed_merge.Rd | 19 valr-0.6.0/valr/man/bed_partition.Rd | 19 valr-0.6.0/valr/man/bed_projection.Rd | 16 valr-0.6.0/valr/man/bed_random.Rd | 20 valr-0.6.0/valr/man/bed_reldist.Rd | 14 valr-0.6.0/valr/man/bed_shift.Rd | 25 - valr-0.6.0/valr/man/bed_shuffle.Rd | 26 - valr-0.6.0/valr/man/bed_slop.Rd | 38 + valr-0.6.0/valr/man/bed_sort.Rd | 4 valr-0.6.0/valr/man/bed_subtract.Rd | 21 valr-0.6.0/valr/man/bed_window.Rd | 27 - valr-0.6.0/valr/man/bound_intervals.Rd | 17 valr-0.6.0/valr/man/create_introns.Rd | 8 valr-0.6.0/valr/man/create_tss.Rd | 8 valr-0.6.0/valr/man/create_utrs3.Rd | 8 valr-0.6.0/valr/man/create_utrs5.Rd | 8 valr-0.6.0/valr/man/db.Rd | 20 valr-0.6.0/valr/man/flip_strands.Rd | 13 valr-0.6.0/valr/man/gr_to_bed.Rd |only valr-0.6.0/valr/man/interval_spacing.Rd | 14 valr-0.6.0/valr/man/ivl_df.Rd |only valr-0.6.0/valr/man/read_bed.Rd | 10 valr-0.6.0/valr/man/read_genome.Rd | 7 valr-0.6.0/valr/man/read_vcf.Rd | 5 valr-0.6.0/valr/src/bed12toexons.cpp | 2 valr-0.6.0/valr/src/valr_utils.cpp | 31 + valr-0.6.0/valr/tests/testthat/test_absdist.r | 12 valr-0.6.0/valr/tests/testthat/test_closest.r | 33 - valr-0.6.0/valr/tests/testthat/test_glyph.r | 6 valr-0.6.0/valr/tests/testthat/test_groups.r | 89 ---- valr-0.6.0/valr/tests/testthat/test_intersect.r | 24 - valr-0.6.0/valr/tests/testthat/test_map.r | 2 valr-0.6.0/valr/tests/testthat/test_merge.r | 14 valr-0.6.0/valr/tests/testthat/test_partition.r | 26 - valr-0.6.0/valr/tests/testthat/test_random.r | 2 valr-0.6.0/valr/tests/testthat/test_sort.r | 2 valr-0.6.0/valr/tests/testthat/test_spacing.r | 2 valr-0.6.0/valr/tests/testthat/test_subtract.r | 4 valr-0.6.0/valr/tests/testthat/test_tbls.r | 99 ---- valr-0.6.0/valr/tests/testthat/test_types.R | 21 valr-0.6.0/valr/tests/testthat/test_utils.r | 10 valr-0.6.0/valr/vignettes/valr.Rmd | 20 104 files changed, 1295 insertions(+), 1483 deletions(-)
Title: Infrastructure for Data Stream Mining
Description: A framework for data stream modeling and associated data mining tasks such as clustering and classification. The development of this package was supported in part by NSF IIS-0948893 and NIH R21HG005912. Hahsler et al (2017) <doi:10.18637/jss.v076.i14>.
Author: Michael Hahsler [aut, cre, cph],
Matthew Bolanos [aut, cph],
John Forrest [ctb],
Matthias Carnein [ctb],
Dennis Assenmacher [ctb]
Maintainer: Michael Hahsler <mhahsler@lyle.smu.edu>
Diff between stream versions 1.3-1 dated 2019-06-08 and 1.3-2 dated 2020-05-04
DESCRIPTION | 10 +++++----- MD5 | 26 +++++++++++++------------- NAMESPACE | 17 +++++++++-------- NEWS.md | 6 ++++++ R/AAA.R | 2 +- build/vignette.rds |binary inst/doc/stream.pdf |binary inst/doc/stream_extension.pdf |binary man/DSC_Hierarchical.Rd | 18 +++++++++--------- man/DSC_evoStream.Rd | 13 +++++++------ man/get_assignment.Rd | 40 +++++++++++++++++++++------------------- src/BIRCH/CFTree.cpp | 8 +++----- src/DBSTREAM.cpp | 4 ++-- src/Makevars | 4 ++-- 14 files changed, 78 insertions(+), 70 deletions(-)
Title: Simple Features for R
Description: Support for simple features, a standardized way to
encode spatial vector data. Binds to 'GDAL' for reading and writing
data, to 'GEOS' for geometrical operations, and to 'PROJ' for
projection conversions and datum transformations.
Author: Edzer Pebesma [aut, cre] (<https://orcid.org/0000-0001-8049-7069>),
Roger Bivand [ctb] (<https://orcid.org/0000-0003-2392-6140>),
Etienne Racine [ctb],
Michael Sumner [ctb],
Ian Cook [ctb],
Tim Keitt [ctb],
Robin Lovelace [ctb],
Hadley Wickham [ctb],
Jeroen Ooms [ctb] (<https://orcid.org/0000-0002-4035-0289>),
Kirill Müller [ctb],
Thomas Lin Pedersen [ctb],
Dan Baston [ctb]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between sf versions 0.9-2 dated 2020-04-14 and 0.9-3 dated 2020-05-04
sf-0.9-2/sf/tests/testthat.Rout.save |only sf-0.9-3/sf/DESCRIPTION | 6 sf-0.9-3/sf/MD5 | 95 - sf-0.9-3/sf/NAMESPACE | 3 sf-0.9-3/sf/NEWS.md | 8 sf-0.9-3/sf/R/crs.R | 3 sf-0.9-3/sf/R/plot.R | 14 sf-0.9-3/sf/R/valid.R | 41 sf-0.9-3/sf/build/vignette.rds |binary sf-0.9-3/sf/configure | 20 sf-0.9-3/sf/configure.ac | 20 sf-0.9-3/sf/inst/doc/sf1.html | 49 sf-0.9-3/sf/inst/doc/sf2.html | 6 sf-0.9-3/sf/inst/doc/sf4.html | 2 sf-0.9-3/sf/inst/doc/sf5.html | 6 sf-0.9-3/sf/inst/doc/sf6.html | 2 sf-0.9-3/sf/inst/docker/gdal/Dockerfile | 15 sf-0.9-3/sf/man/geos_query.Rd | 14 sf-0.9-3/sf/man/plot.Rd | 15 sf-0.9-3/sf/man/valid.Rd | 30 sf-0.9-3/sf/src/Makevars.win | 24 sf-0.9-3/sf/src/gdal.cpp | 21 sf-0.9-3/sf/src/geos.cpp | 2 sf-0.9-3/sf/src/proj.cpp | 100 - sf-0.9-3/sf/tests/aggregate.Rout.save | 226 +-- sf-0.9-3/sf/tests/cast.Rout.save | 480 +++--- sf-0.9-3/sf/tests/crs.Rout.save | 204 +- sf-0.9-3/sf/tests/dist.Rout.save | 222 +-- sf-0.9-3/sf/tests/dplyr.Rout.save | 572 ++++---- sf-0.9-3/sf/tests/empty.Rout.save | 576 ++++---- sf-0.9-3/sf/tests/gdal_geom.Rout.save | 673 ++++----- sf-0.9-3/sf/tests/geos.Rout.save | 1170 ++++++++-------- sf-0.9-3/sf/tests/graticule.Rout.save | 150 +- sf-0.9-3/sf/tests/grid.Rout.save | 158 +- sf-0.9-3/sf/tests/maps.Rout.save | 248 +-- sf-0.9-3/sf/tests/plot.Rout.save | 344 ++-- sf-0.9-3/sf/tests/read.R | 6 sf-0.9-3/sf/tests/read.Rout.save | 742 +++++----- sf-0.9-3/sf/tests/roundtrip.Rout.save | 358 ++--- sf-0.9-3/sf/tests/sample.Rout.save | 112 - sf-0.9-3/sf/tests/sfc.Rout.save | 2262 ++++++++++++++++---------------- sf-0.9-3/sf/tests/sfg.Rout.save | 156 +- sf-0.9-3/sf/tests/spatstat.Rout.save | 610 ++++---- sf-0.9-3/sf/tests/stars.Rout.save | 462 +++--- sf-0.9-3/sf/tests/testthat.R | 2 sf-0.9-3/sf/tests/testthat/test_write.R | 23 sf-0.9-3/sf/tests/units.Rout.save | 134 - sf-0.9-3/sf/tests/wkb.Rout.save | 204 +- sf-0.9-3/sf/tools/winlibs.R | 8 49 files changed, 5346 insertions(+), 5252 deletions(-)
Title: Full Pattern Summation of X-Ray Powder Diffraction Data
Description: Full pattern summation of X-ray powder diffraction data as
described in Chipera and Bish (2002) <doi:10.1107/S0021889802017405>.
Derives quantitative estimates of crystalline and amorphous phase
concentrations in complex mixtures.
Author: Benjamin Butler [aut, cre],
Stephen Hillier [aut],
Dylan Beaudette [ctb],
Dennis Eberl [ctb]
Maintainer: Benjamin Butler <benjamin.butler@hutton.ac.uk>
Diff between powdR versions 1.2.0 dated 2020-03-31 and 1.2.1 dated 2020-05-04
DESCRIPTION | 18 +- MD5 | 69 +++---- NAMESPACE | 4 NEWS.md | 17 + R/afps.R | 164 +++++++++--------- R/alignment.R | 31 ++- R/create_library.R | 39 +--- R/fps.R | 132 ++++++-------- R/fullpat_shift.R | 6 R/harmonise.R | 3 R/lod.R | 29 +-- R/plotting.R | 192 +++++++++++++++++++-- R/qminerals.R | 94 ++++++---- R/run_powdR.R | 7 R/shiny_extras.R |only R/subset.R | 6 build/vignette.rds |binary data/minerals.rda |binary data/minerals_phases.rda |binary data/minerals_xrd.rda |binary data/rockjock.rda |binary inst/doc/powdR_vignette.R | 6 inst/doc/powdR_vignette.Rmd | 12 + inst/doc/powdR_vignette.html | 280 ++++++++++++++++--------------- inst/shiny/server.R | 381 ++++++++++++++++++++----------------------- inst/shiny/ui.R | 71 +++----- man/minerals.Rd | 6 man/minerals_phases.Rd | 6 man/minerals_xrd.Rd | 6 man/plot.powdRafps.Rd | 8 man/plot.powdRfps.Rd | 8 man/rockjock.Rd | 6 man/rockjock_mixtures.Rd | 6 man/run_powdR.Rd | 44 ++-- man/soils.Rd | 6 vignettes/powdR_vignette.Rmd | 12 + 36 files changed, 923 insertions(+), 746 deletions(-)
Title: Econometric Analysis of Explosive Time Series
Description: Testing for and dating periods of explosive
dynamics (exuberance) in time series using the univariate and panel
recursive unit root tests proposed by Phillips et al. (2015)
<doi:10.1111/iere.12132> and Pavlidis et al. (2016)
<doi:10.1007/s11146-015-9531-2>. The recursive least-squares
algorithm utilizes the matrix inversion lemma to avoid matrix
inversion which results in significant speed improvements. Simulation
of a variety of periodically-collapsing bubble processes.
Author: Kostas Vasilopoulos [cre, aut],
Efthymios Pavlidis [aut],
Simon Spavound [aut],
Enrique Martínez-García [aut]
Maintainer: Kostas Vasilopoulos <k.vasilopoulo@gmail.com>
Diff between exuber versions 0.3.0 dated 2019-07-15 and 0.4.0 dated 2020-05-04
exuber-0.3.0/exuber/R/autoplot.R |only exuber-0.3.0/exuber/R/col_names.R |only exuber-0.3.0/exuber/R/data-crit.R |only exuber-0.3.0/exuber/R/mc_cv.R |only exuber-0.3.0/exuber/R/sb_cv.R |only exuber-0.3.0/exuber/R/simul.R |only exuber-0.3.0/exuber/R/summary.R |only exuber-0.3.0/exuber/R/tidiers-cv.R |only exuber-0.3.0/exuber/R/tidiers-join.R |only exuber-0.3.0/exuber/R/wb_cv.R |only exuber-0.3.0/exuber/data/crit.rda |only exuber-0.3.0/exuber/data/datalist |only exuber-0.3.0/exuber/man/augment_join.Rd |only exuber-0.3.0/exuber/man/autoplot.datestamp.Rd |only exuber-0.3.0/exuber/man/autoplot.mc_distr.Rd |only exuber-0.3.0/exuber/man/autoplot.radf.Rd |only exuber-0.3.0/exuber/man/col_names.Rd |only exuber-0.3.0/exuber/man/crit.Rd |only exuber-0.3.0/exuber/man/index.radf.Rd |only exuber-0.3.0/exuber/man/mc_cv.Rd |only exuber-0.3.0/exuber/man/print.ggarrange.Rd |only exuber-0.3.0/exuber/man/sb_cv.Rd |only exuber-0.3.0/exuber/man/summary.Rd |only exuber-0.3.0/exuber/man/tidy.mc_cv.Rd |only exuber-0.3.0/exuber/man/tidy.mc_distr.Rd |only exuber-0.3.0/exuber/man/tidy.radf.Rd |only exuber-0.3.0/exuber/man/wb_cv.Rd |only exuber-0.3.0/exuber/tests/testthat/test-col_names.R |only exuber-0.3.0/exuber/tests/testthat/test-depracated.R |only exuber-0.4.0/exuber/DESCRIPTION | 30 +- exuber-0.4.0/exuber/MD5 | 184 +++++++------- exuber-0.4.0/exuber/NAMESPACE | 122 +++++---- exuber-0.4.0/exuber/NEWS.md | 31 ++ exuber-0.4.0/exuber/R/RcppExports.R | 1 exuber-0.4.0/exuber/R/alternative-styles.R |only exuber-0.4.0/exuber/R/autoplot-radf.R |only exuber-0.4.0/exuber/R/datestamp.R |only exuber-0.4.0/exuber/R/deprecate.R | 103 ++++++-- exuber-0.4.0/exuber/R/diagnostics.R |only exuber-0.4.0/exuber/R/distr-pvalues.R |only exuber-0.4.0/exuber/R/doc-data.R |only exuber-0.4.0/exuber/R/exuber-package.r | 4 exuber-0.4.0/exuber/R/index.R | 106 +++++--- exuber-0.4.0/exuber/R/parse_data.R | 29 +- exuber-0.4.0/exuber/R/radf.R | 165 +++++-------- exuber-0.4.0/exuber/R/radf_mc.R |only exuber-0.4.0/exuber/R/radf_sb.R |only exuber-0.4.0/exuber/R/radf_wb.R |only exuber-0.4.0/exuber/R/reexports.R | 39 --- exuber-0.4.0/exuber/R/reg-helper.R |only exuber-0.4.0/exuber/R/series_names.R |only exuber-0.4.0/exuber/R/sim.R |only exuber-0.4.0/exuber/R/summary-radf.R |only exuber-0.4.0/exuber/R/tidiers-join-radf.R |only exuber-0.4.0/exuber/R/tidiers-radf.R | 121 ++++----- exuber-0.4.0/exuber/R/tidiers-radf_cv.R |only exuber-0.4.0/exuber/R/utils-attrs.R | 23 - exuber-0.4.0/exuber/R/utils-defensive.R | 59 ++-- exuber-0.4.0/exuber/R/utils.R | 92 +++---- exuber-0.4.0/exuber/R/zzz.R | 61 ++++ exuber-0.4.0/exuber/README.md | 172 ++++++++++++- exuber-0.4.0/exuber/build/vignette.rds |binary exuber-0.4.0/exuber/data/radf_crit.rda |only exuber-0.4.0/exuber/data/sim_data.rda |only exuber-0.4.0/exuber/data/sim_data_wdate.rda |only exuber-0.4.0/exuber/inst/WORDLIST | 11 exuber-0.4.0/exuber/inst/doc/Tidy.R |only exuber-0.4.0/exuber/inst/doc/Tidy.Rmd |only exuber-0.4.0/exuber/inst/doc/Tidy.html |only exuber-0.4.0/exuber/inst/doc/exuber.R | 34 +- exuber-0.4.0/exuber/inst/doc/exuber.Rmd | 42 ++- exuber-0.4.0/exuber/inst/doc/exuber.html | 177 +++++++------- exuber-0.4.0/exuber/inst/doc/plotting.R | 125 ++++----- exuber-0.4.0/exuber/inst/doc/plotting.Rmd | 154 +++++++----- exuber-0.4.0/exuber/inst/doc/plotting.html | 213 +++++++++-------- exuber-0.4.0/exuber/inst/doc/simulation.R | 32 -- exuber-0.4.0/exuber/inst/doc/simulation.Rmd | 22 - exuber-0.4.0/exuber/inst/doc/simulation.html | 21 - exuber-0.4.0/exuber/man/autoplot.ds_radf.Rd |only exuber-0.4.0/exuber/man/autoplot.radf_distr.Rd |only exuber-0.4.0/exuber/man/autoplot.radf_obj.Rd |only exuber-0.4.0/exuber/man/calc_pvalue.Rd | 17 - exuber-0.4.0/exuber/man/datestamp.Rd | 54 ++-- exuber-0.4.0/exuber/man/diagnostics.Rd | 36 +- exuber-0.4.0/exuber/man/exuber-defunct.Rd |only exuber-0.4.0/exuber/man/exuber-deprecated.Rd | 22 - exuber-0.4.0/exuber/man/exuber.Rd | 6 exuber-0.4.0/exuber/man/figures/usage-1.png |only exuber-0.4.0/exuber/man/index-rd.Rd |only exuber-0.4.0/exuber/man/install_exuberdata.Rd |only exuber-0.4.0/exuber/man/psy_minw.Rd | 18 - exuber-0.4.0/exuber/man/radf.Rd | 53 +++- exuber-0.4.0/exuber/man/radf_crit.Rd |only exuber-0.4.0/exuber/man/radf_mc_cv.Rd |only exuber-0.4.0/exuber/man/radf_sb_cv.Rd |only exuber-0.4.0/exuber/man/radf_wb_cv.Rd |only exuber-0.4.0/exuber/man/reexports.Rd | 37 -- exuber-0.4.0/exuber/man/scale_exuber_manual.Rd |only exuber-0.4.0/exuber/man/series_names.Rd |only exuber-0.4.0/exuber/man/sim_blan.Rd | 21 - exuber-0.4.0/exuber/man/sim_data.Rd |only exuber-0.4.0/exuber/man/sim_div.Rd | 36 +- exuber-0.4.0/exuber/man/sim_evans.Rd | 35 +- exuber-0.4.0/exuber/man/sim_psy1.Rd | 54 ++-- exuber-0.4.0/exuber/man/sim_psy2.Rd | 68 +++-- exuber-0.4.0/exuber/man/summary.radf_obj.Rd |only exuber-0.4.0/exuber/man/tidy.ds_radf.Rd |only exuber-0.4.0/exuber/man/tidy.radf_cv.Rd |only exuber-0.4.0/exuber/man/tidy.radf_distr.Rd |only exuber-0.4.0/exuber/man/tidy.radf_obj.Rd |only exuber-0.4.0/exuber/man/tidy_join.Rd |only exuber-0.4.0/exuber/man/tidy_join.radf_obj.Rd |only exuber-0.4.0/exuber/src/rls_gsadf.cpp | 10 exuber-0.4.0/exuber/tests/spelling.R | 2 exuber-0.4.0/exuber/tests/testthat/helper.R | 56 +--- exuber-0.4.0/exuber/tests/testthat/test-autoplot.R | 49 +-- exuber-0.4.0/exuber/tests/testthat/test-cv.R | 98 +++---- exuber-0.4.0/exuber/tests/testthat/test-deprecated.R |only exuber-0.4.0/exuber/tests/testthat/test-dist.R | 25 - exuber-0.4.0/exuber/tests/testthat/test-fortify.R | 6 exuber-0.4.0/exuber/tests/testthat/test-index.R | 9 exuber-0.4.0/exuber/tests/testthat/test-radf.R | 6 exuber-0.4.0/exuber/tests/testthat/test-seed.R | 43 +++ exuber-0.4.0/exuber/tests/testthat/test-series_names.R |only exuber-0.4.0/exuber/tests/testthat/test-summary.R | 60 ++-- exuber-0.4.0/exuber/tests/testthat/test-tidiers.R | 14 - exuber-0.4.0/exuber/vignettes/Tidy.Rmd |only exuber-0.4.0/exuber/vignettes/exuber.Rmd | 42 ++- exuber-0.4.0/exuber/vignettes/plotting.Rmd | 154 +++++++----- exuber-0.4.0/exuber/vignettes/simulation.Rmd | 22 - 130 files changed, 1858 insertions(+), 1368 deletions(-)
Title: Download and Manage Open Data from INEGI
Description: Download and manage data sets of statistical projects and geographic data created by Instituto Nacional de Estadistica y Geografia (INEGI). See <https://www.inegi.org.mx/>.
Author: Cesar Renteria [aut, cre]
Maintainer: Cesar Renteria <crenteria@albany.edu>
Diff between importinegi versions 1.1.1 dated 2020-03-20 and 1.1.2 dated 2020-05-04
DESCRIPTION | 10 MD5 | 16 - NAMESPACE | 2 R/censo_poblacion_iter.R | 2 R/censo_poblacion_urbano.R | 2 R/enoe.R | 2 README.md | 8 build/vignette.rds |binary inst/doc/importinegi.html | 636 ++++++++++++++++++++------------------------- 9 files changed, 307 insertions(+), 371 deletions(-)
More information about xaringanthemer at CRAN
Permanent link
Title: Functions for Analyzing and Plotting Estuary Monitoring Data
Description: Tools for performing routine analysis and plotting tasks with environmental
data from the System Wide Monitoring Program of the National Estuarine
Research Reserve System <http://cdmo.baruch.sc.edu/>. This package builds
on the functionality of the SWMPr package <https://cran.r-project.org/package=SWMPr>,
which is used to retrieve and organize the data. The combined set of tools
address common challenges associated with continuous time series data
for environmental decision making, and are intended for use in annual reporting activities.
References:
Beck, Marcus W. (2016) <ISSN 2073-4859><https://journal.r-project.org/archive/2016-1/beck.pdf>
Rudis, Bob (2014) <https://rud.is/b/2014/11/16/moving-the-earth-well-alaska-hawaii-with-r/>.
United States Environmental Protection Agency (2015) <https://cfpub.epa.gov/si/si_public_record_Report.cfm?dirEntryId=327030>.
United States Environmental Protection Agency (2012) <http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.646.1973&rep=rep1&type=pdf>.
Author: Julie Padilla [aut, ctb],
Marcus Beck [ctb],
Kimberly Cressman [ctb],
Dave Eslinger [cre, ctb],
Bob Rudis [ctb]
Maintainer: Dave Eslinger <dave.eslinger@noaa.gov>
Diff between SWMPrExtension versions 1.1.3 dated 2020-03-02 and 1.1.4 dated 2020-05-04
SWMPrExtension-1.1.3/SWMPrExtension/data/datalist |only SWMPrExtension-1.1.4/SWMPrExtension/DESCRIPTION | 8 SWMPrExtension-1.1.4/SWMPrExtension/MD5 | 45 - SWMPrExtension-1.1.4/SWMPrExtension/NAMESPACE | 249 +++++----- SWMPrExtension-1.1.4/SWMPrExtension/NEWS.md | 7 SWMPrExtension-1.1.4/SWMPrExtension/R/create_sk_national_ft_results.R | 2 SWMPrExtension-1.1.4/SWMPrExtension/R/historical_range.R | 11 SWMPrExtension-1.1.4/SWMPrExtension/R/seasonal_dot.R | 39 + SWMPrExtension-1.1.4/SWMPrExtension/R/threshold_percentile_plot.R | 28 - SWMPrExtension-1.1.4/SWMPrExtension/man/cbm_spatial.Rd | 42 - SWMPrExtension-1.1.4/SWMPrExtension/man/create_sk_national_ft_results.Rd | 82 +-- SWMPrExtension-1.1.4/SWMPrExtension/man/elk_spatial.Rd | 42 - SWMPrExtension-1.1.4/SWMPrExtension/man/elknmnut.Rd | 42 - SWMPrExtension-1.1.4/SWMPrExtension/man/elksmwq.Rd | 42 - SWMPrExtension-1.1.4/SWMPrExtension/man/historical_range.Rd | 180 +++---- SWMPrExtension-1.1.4/SWMPrExtension/man/load_shp_file.Rd | 52 +- SWMPrExtension-1.1.4/SWMPrExtension/man/national_sk_map.Rd | 116 ++-- SWMPrExtension-1.1.4/SWMPrExtension/man/res_custom_sk_map.Rd | 142 ++--- SWMPrExtension-1.1.4/SWMPrExtension/man/res_local_map.Rd | 182 +++---- SWMPrExtension-1.1.4/SWMPrExtension/man/res_national_map.Rd | 120 ++-- SWMPrExtension-1.1.4/SWMPrExtension/man/res_sk_map.Rd | 182 +++---- SWMPrExtension-1.1.4/SWMPrExtension/man/reserve_locs.Rd | 52 +- SWMPrExtension-1.1.4/SWMPrExtension/man/sampling_stations.Rd | 42 - SWMPrExtension-1.1.4/SWMPrExtension/man/us_laea.Rd | 42 - 24 files changed, 899 insertions(+), 850 deletions(-)
More information about SWMPrExtension at CRAN
Permanent link
Title: Test and Item Analysis via Shiny
Description: Interactive shiny application for analysis of educational tests and
their items.
Author: Patricia Martinkova [aut, cre],
Adela Hladka [aut],
Ondrej Leder [ctb],
Jakub Houdek [ctb],
Lubomir Stepanek [ctb],
Tomas Jurica [ctb],
Jana Vorlickova [ctb],
Jan Netik [ctb]
Maintainer: Patricia Martinkova <martinkova@cs.cas.cz>
Diff between ShinyItemAnalysis versions 1.3.2 dated 2020-01-28 and 1.3.3 dated 2020-05-04
ShinyItemAnalysis-1.3.2/ShinyItemAnalysis/NEWS |only ShinyItemAnalysis-1.3.2/ShinyItemAnalysis/R/print_Logistic_edited.R |only ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/DESCRIPTION | 14 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/MD5 | 107 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/NAMESPACE | 5 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/NEWS.md |only ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/R/DDplot.R | 30 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/R/ShinyItemAnalysis-package.R |only ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/R/difLogistic_edited.R | 22 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/R/difLord_edited.R |only ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/R/difMH_edited.R | 27 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/R/difRaju_edited.R |only ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/R/difSIBTEST_edited.R | 16 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/R/onAttach.R | 3 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/R/plotDIFLogistic.R | 10 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/README.md | 17 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/data/HCI.rda |binary ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/data/HCIkey.rda |binary ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/data/HCItest.rda |binary ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/data/LearningToLearn.rda |binary ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/data/dataMedical.rda |binary ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/data/dataMedicalgraded.rda |binary ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/data/dataMedicalkey.rda |binary ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/data/dataMedicaltest.rda |binary ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/reporthtml.Rmd | 31 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/reportpdf.Rmd | 35 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/server.R | 16 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/server/DIF.R | 2761 ++++++++-- ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/server/Summary.R | 23 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/ui.R | 2 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/ui/uiAbout.R | 6 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/ui/uiDIF.R | 1163 ++-- ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/ui/uiReferences.R | 6 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/www/fig_DDF_nonuniform.png |only ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/www/fig_DDF_uniform.png |only ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/www/fig_DIF_nonuniform.png |binary ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/inst/shiny-examples/ShinyItemAnalysis/www/fig_DIF_uniform.png |binary ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/DDplot.Rd | 278 - ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/DistractorAnalysis.Rd | 168 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/HCI.Rd | 66 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/HCIkey.Rd | 56 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/HCItest.Rd | 66 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/ItemAnalysis.Rd | 258 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/LearningToLearn.Rd | 130 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/ShinyItemAnalysis-package.Rd |only ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/dataMedical.Rd | 86 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/dataMedicalgraded.Rd | 88 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/dataMedicalkey.Rd | 70 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/dataMedicaltest.Rd | 86 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/gDiscrim.Rd | 178 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/ggWrightMap.Rd | 126 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/plotAdjacent.Rd | 98 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/plotCumulative.Rd | 106 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/plotDIFLogistic.Rd | 152 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/plotDIFirt.Rd | 150 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/plotDistractorAnalysis.Rd | 204 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/plotMultinomial.Rd | 94 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/startShinyItemAnalysis.Rd | 54 ShinyItemAnalysis-1.3.3/ShinyItemAnalysis/man/theme_app.Rd | 70 59 files changed, 4386 insertions(+), 2492 deletions(-)
More information about ShinyItemAnalysis at CRAN
Permanent link
Title: Calculate Pairwise Distances
Description: A common framework for calculating distance matrices.
Author: Nello Blaser [aut, cre]
Maintainer: Nello Blaser <nello.blaser@uib.no>
Diff between rdist versions 0.0.4 dated 2020-02-11 and 0.0.5 dated 2020-05-04
DESCRIPTION | 8 - MD5 | 54 ++++----- NAMESPACE | 28 ++-- NEWS.md | 79 +++++++------ R/FUN_distances.R | 52 ++++---- R/RcppExports.R | 214 ++++++++++++++++++------------------- R/correlation_distances.R | 74 ++++++------ R/distance_functions.r | 194 ++++++++++++++++----------------- R/farthest_point_sampling.R | 100 ++++++++--------- R/is_metric.R | 116 ++++++++++---------- R/product_metric.R | 76 ++++++------- R/rdist-package.r | 70 ++++++------ README.md | 56 ++++----- man/farthest_point_sampling.Rd | 86 +++++++------- man/is_metric.Rd | 58 +++++----- man/product_metric.Rd | 58 +++++----- man/rdist.Rd | 96 ++++++++-------- src/dist.cpp | 18 +-- tests/testthat.R | 8 - tests/testthat/test-canberra.R | 34 ++--- tests/testthat/test-correlation.R | 98 ++++++++-------- tests/testthat/test-euclidean.R | 82 +++++++------- tests/testthat/test-hamming.R | 48 ++++---- tests/testthat/test-jaccard.R | 60 +++++----- tests/testthat/test-manhattan.R | 34 ++--- tests/testthat/test-maximum.R | 34 ++--- tests/testthat/test-minkowski.R | 94 ++++++++-------- tests/testthat/test-user-defined.R | 106 +++++++++--------- 28 files changed, 1019 insertions(+), 1016 deletions(-)
More information about prismadiagramR at CRAN
Permanent link
Title: NHS and Healthcare-Related Data for Education and Training
Description: Free United Kingdom National Health Service (NHS) and other healthcare, or population health-related data for education and training purposes. This package currently contains a single simulated hospital dataset for teaching regression methods, with the addition of more datasets planned for future releases. This package exists to support skills development in the NHS-R community: <https://nhsrcommunity.com/>.
Author: Chris Mainey [aut, cre] (<https://orcid.org/0000-0002-3018-6171>),
Tom Jemmett [aut] (<https://orcid.org/0000-0002-6943-2990>),
Zoë Turner [aut],
NHS-R community [cph]
Maintainer: Chris Mainey <chris.mainey@uhb.nhs.uk>
Diff between NHSRdatasets versions 0.1.2 dated 2019-09-27 and 0.2.0 dated 2020-05-04
NHSRdatasets-0.1.2/NHSRdatasets/data/LOS_model.RData |only NHSRdatasets-0.1.2/NHSRdatasets/data/ae_attendances.RData |only NHSRdatasets-0.2.0/NHSRdatasets/DESCRIPTION | 20 + NHSRdatasets-0.2.0/NHSRdatasets/MD5 | 37 +- NHSRdatasets-0.2.0/NHSRdatasets/NEWS.md | 11 NHSRdatasets-0.2.0/NHSRdatasets/R/ae_attendances.R | 1 NHSRdatasets-0.2.0/NHSRdatasets/R/ons_mortality.R |only NHSRdatasets-0.2.0/NHSRdatasets/README.md | 8 NHSRdatasets-0.2.0/NHSRdatasets/build/vignette.rds |binary NHSRdatasets-0.2.0/NHSRdatasets/data/LOS_model.rda |only NHSRdatasets-0.2.0/NHSRdatasets/data/ae_attendances.rda |only NHSRdatasets-0.2.0/NHSRdatasets/data/ons_mortality.rda |only NHSRdatasets-0.2.0/NHSRdatasets/inst/doc/LOS_model.R | 26 - NHSRdatasets-0.2.0/NHSRdatasets/inst/doc/LOS_model.Rmd | 8 NHSRdatasets-0.2.0/NHSRdatasets/inst/doc/LOS_model.html | 105 +++---- NHSRdatasets-0.2.0/NHSRdatasets/inst/doc/ae_attendances.R | 18 - NHSRdatasets-0.2.0/NHSRdatasets/inst/doc/ae_attendances.html | 148 +++++------ NHSRdatasets-0.2.0/NHSRdatasets/inst/doc/ons_mortality.R |only NHSRdatasets-0.2.0/NHSRdatasets/inst/doc/ons_mortality.Rmd |only NHSRdatasets-0.2.0/NHSRdatasets/inst/doc/ons_mortality.html |only NHSRdatasets-0.2.0/NHSRdatasets/man/LOS_model.Rd | 6 NHSRdatasets-0.2.0/NHSRdatasets/man/ae_attendances.Rd | 6 NHSRdatasets-0.2.0/NHSRdatasets/man/ons_mortality.Rd |only NHSRdatasets-0.2.0/NHSRdatasets/vignettes/LOS_model.Rmd | 8 NHSRdatasets-0.2.0/NHSRdatasets/vignettes/ons_mortality.Rmd |only 25 files changed, 216 insertions(+), 186 deletions(-)
Title: DIF and DDF Detection by Non-Linear Regression Models
Description: Detection of differential item functioning (DIF) among dichotomously scored items and differential distractor functioning (DDF) among unscored items with non-linear regression procedures based on generalized logistic regression models (Drabinova and Martinkova, 2017, doi:10.1111/jedm.12158).
Author: Adela Hladka [aut, cre],
Patricia Martinkova [aut],
Karel Zvara [ctb]
Maintainer: Adela Hladka <hladka@cs.cas.cz>
Diff between difNLR versions 1.3.2 dated 2020-01-28 and 1.3.3 dated 2020-05-04
DESCRIPTION | 10 MD5 | 85 ++--- NAMESPACE | 4 NEWS.md | 46 ++ R/MLR.R | 5 R/NLR.R | 167 ++++++---- R/ORD.R | 7 R/ddfMLR.R | 217 ++++++++++--- R/difNLR-package.R | 11 R/difNLR.R | 684 ++++++++++++++++++++++++++++++------------- R/difORD.R | 242 +++++++++++---- R/formulaNLR.R | 4 R/genNLR.R | 5 R/startNLR.R | 16 - README.md | 11 inst/CITATION | 13 inst/DDF_CLRM_category.png |binary inst/DDF_CLRM_cumulative.png |binary inst/DIF_NLR.png |binary man/GMAT.Rd | 6 man/GMAT2.Rd | 6 man/GMAT2key.Rd | 6 man/GMAT2test.Rd | 6 man/GMATkey.Rd | 6 man/GMATtest.Rd | 6 man/MLR.Rd | 2 man/MSATB.Rd | 6 man/MSATBkey.Rd | 6 man/MSATBtest.Rd | 6 man/NLR.Rd | 7 man/ORD.Rd | 4 man/coef.ddfMLR.Rd |only man/coef.difNLR.Rd |only man/coef.difORD.Rd |only man/ddfMLR.Rd | 70 +--- man/difNLR-package.Rd | 9 man/difNLR.Rd | 82 +---- man/difORD.Rd | 78 +--- man/formulaNLR.Rd | 3 man/logLik.ddfMLR.Rd |only man/logLik.difNLR.Rd |only man/logLik.difORD.Rd |only man/plot.ddfMLR.Rd |only man/plot.difNLR.Rd | 210 ++++++------- man/plot.difORD.Rd |only man/predict.difNLR.Rd | 39 +- man/residuals.difNLR.Rd |only man/startNLR.Rd | 2 48 files changed, 1338 insertions(+), 749 deletions(-)
Title: IUCN Redlisting Tools
Description: Includes algorithms to facilitate the assessment of extinction
risk of species according to the IUCN (International Union for Conservation of
Nature, see <http://www.iucn.org> for more information) red list criteria.
Author: Pedro Cardoso
Maintainer: Pedro Cardoso <pedro.cardoso@helsinki.fi>
Diff between red versions 1.4.0 dated 2018-05-08 and 1.5.0 dated 2020-05-04
DESCRIPTION | 16 MD5 | 31 NAMESPACE | 3 R/red.R | 3421 ++++++++++++++++++++++++------------------------- man/kml.Rd | 3 man/map.draw.Rd | 13 man/map.easy.Rd | 22 man/map.habitat.Rd | 10 man/map.sdm.Rd | 18 man/raster.distance.Rd | 18 man/red.layers.Rd | 4 man/red.range.Rd | 4 man/red.records.Rd | 4 man/rli.Rd | 8 man/rli.multi.Rd | 4 man/rli.predict.Rd |only man/worldborders.Rd | 4 17 files changed, 1854 insertions(+), 1729 deletions(-)
More information about ShiftConvolvePoibin at CRAN
Permanent link
Title: Filtering and Assessing Sample Size of Tracking Data
Description: Functions to filter GPS and/or Argos locations, as well as assessing sample sizes for the analysis of animal distributions. The filters remove temporal and spatial duplicates, fixes located at a given height from estimated high tide line, and locations with high error as described in Shimada et al. (2012) <doi:10.3354/meps09747> and Shimada et al. (2016) <doi:10.1007/s00227-015-2771-0>. Sample sizes for the analysis of animal distributions can be assessed by the conventional area-based approach or the alternative probability-based approach as described in Shimada et al. (in prep).
Author: Takahiro Shimada
Maintainer: Takahiro Shimada <taka.shimada@gmail.com>
Diff between SDLfilter versions 1.2.1 dated 2019-02-26 and 2.0.0 dated 2020-05-04
SDLfilter-1.2.1/SDLfilter/R/ddfilter.loop.r |only SDLfilter-1.2.1/SDLfilter/R/ddfilter.r |only SDLfilter-1.2.1/SDLfilter/R/ddfilter.speed.r |only SDLfilter-1.2.1/SDLfilter/R/depthfilter.r |only SDLfilter-1.2.1/SDLfilter/R/distancefilter.r |only SDLfilter-1.2.1/SDLfilter/R/dupfilter.exact.r |only SDLfilter-1.2.1/SDLfilter/R/dupfilter.qi.r |only SDLfilter-1.2.1/SDLfilter/R/dupfilter.r |only SDLfilter-1.2.1/SDLfilter/R/dupfilter.space.r |only SDLfilter-1.2.1/SDLfilter/R/dupfilter.time.r |only SDLfilter-1.2.1/SDLfilter/R/estMaxVlp.R |only SDLfilter-1.2.1/SDLfilter/R/estVmax.R |only SDLfilter-1.2.1/SDLfilter/R/plotMap.R |only SDLfilter-1.2.1/SDLfilter/man/ddfilter.loop.Rd |only SDLfilter-1.2.1/SDLfilter/man/ddfilter.speed.Rd |only SDLfilter-1.2.1/SDLfilter/man/distance_filter.Rd |only SDLfilter-1.2.1/SDLfilter/man/dupfilter.exact.Rd |only SDLfilter-1.2.1/SDLfilter/man/dupfilter.qi.Rd |only SDLfilter-1.2.1/SDLfilter/man/dupfilter.space.Rd |only SDLfilter-1.2.1/SDLfilter/man/dupfilter.time.Rd |only SDLfilter-1.2.1/SDLfilter/man/est.maxvlp.Rd |only SDLfilter-1.2.1/SDLfilter/man/est.vmax.Rd |only SDLfilter-1.2.1/SDLfilter/man/figures/README-example.png |only SDLfilter-1.2.1/SDLfilter/man/plotMap.Rd |only SDLfilter-2.0.0/SDLfilter/DESCRIPTION | 24 +-- SDLfilter-2.0.0/SDLfilter/MD5 | 104 ++++++++------ SDLfilter-2.0.0/SDLfilter/NAMESPACE | 46 ++++-- SDLfilter-2.0.0/SDLfilter/NEWS | 20 ++ SDLfilter-2.0.0/SDLfilter/NEWS.md | 27 ++- SDLfilter-2.0.0/SDLfilter/R/asymptote.R |only SDLfilter-2.0.0/SDLfilter/R/bathymodel.R | 14 - SDLfilter-2.0.0/SDLfilter/R/boot_area.R |only SDLfilter-2.0.0/SDLfilter/R/boot_overlap.R |only SDLfilter-2.0.0/SDLfilter/R/curtis.R |only SDLfilter-2.0.0/SDLfilter/R/ddfilter.R |only SDLfilter-2.0.0/SDLfilter/R/ddfilter_loop.R |only SDLfilter-2.0.0/SDLfilter/R/ddfilter_speed.R |only SDLfilter-2.0.0/SDLfilter/R/depthfilter.R |only SDLfilter-2.0.0/SDLfilter/R/distfilter.R |only SDLfilter-2.0.0/SDLfilter/R/dupfilter.R |only SDLfilter-2.0.0/SDLfilter/R/dupfilter_exact.R |only SDLfilter-2.0.0/SDLfilter/R/dupfilter_qi.R |only SDLfilter-2.0.0/SDLfilter/R/dupfilter_space.R |only SDLfilter-2.0.0/SDLfilter/R/dupfilter_time.R |only SDLfilter-2.0.0/SDLfilter/R/kml_track.R |only SDLfilter-2.0.0/SDLfilter/R/map_track.R |only SDLfilter-2.0.0/SDLfilter/R/percent_vol.R |only SDLfilter-2.0.0/SDLfilter/R/tidalplane.R | 30 ++-- SDLfilter-2.0.0/SDLfilter/R/tidedata.R | 20 +- SDLfilter-2.0.0/SDLfilter/R/track_param.R |only SDLfilter-2.0.0/SDLfilter/R/turtle.R | 14 - SDLfilter-2.0.0/SDLfilter/R/turtle2.R | 14 - SDLfilter-2.0.0/SDLfilter/R/vmax.R |only SDLfilter-2.0.0/SDLfilter/R/vmaxlp.R |only SDLfilter-2.0.0/SDLfilter/README.md | 99 ++++++++++--- SDLfilter-2.0.0/SDLfilter/data/curtis.rda |only SDLfilter-2.0.0/SDLfilter/man/Australia.Rd | 4 SDLfilter-2.0.0/SDLfilter/man/SandyStrait.Rd | 4 SDLfilter-2.0.0/SDLfilter/man/asymptote.Rd |only SDLfilter-2.0.0/SDLfilter/man/bathymodel.Rd | 6 SDLfilter-2.0.0/SDLfilter/man/boot_area.Rd |only SDLfilter-2.0.0/SDLfilter/man/boot_overlap.Rd |only SDLfilter-2.0.0/SDLfilter/man/curtis.Rd |only SDLfilter-2.0.0/SDLfilter/man/ddfilter.Rd | 74 +++++---- SDLfilter-2.0.0/SDLfilter/man/ddfilter_loop.Rd |only SDLfilter-2.0.0/SDLfilter/man/ddfilter_speed.Rd |only SDLfilter-2.0.0/SDLfilter/man/depthfilter.Rd | 95 +++++++----- SDLfilter-2.0.0/SDLfilter/man/distfilter.Rd |only SDLfilter-2.0.0/SDLfilter/man/dupfilter.Rd | 42 ++--- SDLfilter-2.0.0/SDLfilter/man/dupfilter_exact.Rd |only SDLfilter-2.0.0/SDLfilter/man/dupfilter_qi.Rd |only SDLfilter-2.0.0/SDLfilter/man/dupfilter_space.Rd |only SDLfilter-2.0.0/SDLfilter/man/dupfilter_time.Rd |only SDLfilter-2.0.0/SDLfilter/man/figures/README-example1.png |only SDLfilter-2.0.0/SDLfilter/man/figures/README-example2.png |only SDLfilter-2.0.0/SDLfilter/man/kml_track.Rd |only SDLfilter-2.0.0/SDLfilter/man/map_track.Rd |only SDLfilter-2.0.0/SDLfilter/man/percent_vol.Rd |only SDLfilter-2.0.0/SDLfilter/man/tidalplane.Rd | 24 +-- SDLfilter-2.0.0/SDLfilter/man/tidedata.Rd | 12 - SDLfilter-2.0.0/SDLfilter/man/track_param.Rd |only SDLfilter-2.0.0/SDLfilter/man/turtle.Rd | 20 +- SDLfilter-2.0.0/SDLfilter/man/turtle2.Rd | 20 +- SDLfilter-2.0.0/SDLfilter/man/vmax.Rd |only SDLfilter-2.0.0/SDLfilter/man/vmaxlp.Rd |only 85 files changed, 439 insertions(+), 274 deletions(-)
Title: Latent Semantic Analysis
Description: The basic idea of latent semantic analysis (LSA) is,
that text do have a higher order (=latent semantic) structure which,
however, is obscured by word usage (e.g. through the use of synonyms
or polysemy). By using conceptual indices that are derived statistically
via a truncated singular value decomposition (a two-mode factor analysis)
over a given document-term matrix, this variability problem can be overcome.
Author: Fridolin Wild
Maintainer: Fridolin Wild <wild@brookes.ac.uk>
Diff between lsa versions 0.73.1 dated 2015-05-08 and 0.73.2 dated 2020-05-04
DESCRIPTION | 9 ++++----- MD5 | 6 +++--- NAMESPACE | 2 ++ R/textmatrix.R | 2 +- 4 files changed, 10 insertions(+), 9 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-05-03 1.2.1
2018-06-30 1.2
2012-11-13 1.01
2012-10-31 1.0
2012-09-12 0.99
Title: Models for Data from Unmarked Animals
Description: Fits hierarchical models of animal abundance and occurrence to data collected using survey methods such as point counts, site occupancy sampling, distance sampling, removal sampling, and double observer sampling. Parameters governing the state and observation processes can be modeled as functions of covariates.
Author: Richard Chandler [aut],
Ken Kellner [aut],
Ian Fiske [aut],
David Miller [aut],
Andy Royle [cre, aut],
Jeff Hostetler [aut],
Rebecca Hutchinson [aut],
Adam Smith [aut],
Marc Kery [ctb],
Mike Meredith [ctb],
Auriel Fournier [ctb],
Ariel Muldoon [ctb],
Chris Baker [ctb]
Maintainer: Andy Royle <aroyle@usgs.gov>
Diff between unmarked versions 0.13-2 dated 2020-03-04 and 1.0.0 dated 2020-05-04
DESCRIPTION | 48 +- MD5 | 98 +++- NAMESPACE | 28 - NEWS | 8 R/distsampOpen.R |only R/getDesign.R | 243 +++++++++++- R/multmixOpen.R |only R/occuMulti.R | 2 R/occuPEN.R | 60 +- R/posteriorSamples.R |only R/ranef.R | 199 +++++++++ R/unmarkedFit.R | 721 +++++++++++++++++++++++++++++------- R/unmarkedFrame.R | 189 +++++++++ R/utils.R | 118 +++++ inst/doc/cap-recap.pdf |binary inst/doc/colext.pdf |binary inst/doc/distsamp.pdf |binary inst/doc/spp-dist.pdf |binary inst/doc/unmarked.pdf |binary inst/unitTests/runTests.R | 5 inst/unitTests/runit.distsampOpen.R |only inst/unitTests/runit.multmixOpen.R |only inst/unitTests/runit.occu.R | 11 inst/unitTests/runit.occuMulti.R | 7 inst/unitTests/runit.ranef.R | 80 +++ inst/unitTests/runit.simulate.R |only inst/unitTests/sim.distsampOpen.R |only man/distsampOpen.Rd |only man/fitted-methods.Rd | 1 man/getP-methods.Rd | 2 man/multmixOpen.Rd |only man/occuMulti.Rd | 3 man/pcountOpen.Rd | 6 man/posteriorSamples.Rd |only man/predict-methods.Rd | 31 + man/ranef-methods.Rd | 34 + man/simulate-methods.Rd | 2 man/unmarkedFit-class.Rd | 4 man/unmarkedFrame-class.Rd | 3 man/unmarkedFrameDSO.Rd |only man/unmarkedFrameMMO.Rd |only man/unmarkedFrameOccuMulti.Rd | 2 src/detfuns.h | 2 src/distprob.cpp |only src/distprob.h |only src/get_lik_trans.cpp |only src/get_lik_trans.h |only src/init.c | 9 src/nll_distsampOpen.cpp |only src/nll_distsampOpen.h |only src/nll_gdistsamp.cpp | 102 ----- src/nll_gdistsamp.h | 2 src/nll_gmultmix.cpp | 6 src/nll_gmultmix.h | 1 src/nll_multmixOpen.cpp |only src/nll_multmixOpen.h |only src/nll_pcountOpen.cpp | 66 --- src/nll_pcountOpen.h | 37 - src/tranprobs.cpp |only src/tranprobs.h |only src/utils.cpp |only src/utils.h |only 62 files changed, 1683 insertions(+), 447 deletions(-)
Title: Spatial Objects of the Czech Republic
Description: Administrative regions and other spatial objects of the Czech Republic.
Author: Jindra Lacko
Maintainer: Jindra Lacko <jindra.lacko@gmail.com>
Diff between RCzechia versions 1.4.6 dated 2020-04-11 and 1.5.0 dated 2020-05-04
DESCRIPTION | 9 - MD5 | 58 ++++---- NEWS.md | 8 + R/geocode.R | 7 R/kraje.R | 6 R/obce_body.R | 6 R/obce_polygony.R | 6 R/okresy.R | 6 R/orp_polygony.R | 6 R/reky.R | 33 ++++ R/republika.R | 6 R/revgeo.R | 4 R/sysdata.rda |binary README.md | 12 - build/vignette.rds |binary inst/doc/vignette.R | 42 ++++- inst/doc/vignette.Rmd | 52 ++++--- inst/doc/vignette.html | 229 ++++++++++++++++---------------- man/geocode.Rd | 6 man/kraje.Rd | 4 man/obce_body.Rd | 2 man/obce_polygony.Rd | 4 man/okresy.Rd | 4 man/orp_polygony.Rd | 4 man/reky.Rd | 16 +- man/republika.Rd | 4 man/revgeo.Rd | 4 tests/testthat/test-1-data-structures.R | 133 ++++++++++++++---- tests/testthat/test-2-code.R | 17 +- vignettes/vignette.Rmd | 52 ++++--- 30 files changed, 463 insertions(+), 277 deletions(-)
Title: Create Tables from Different Types of Regression
Description: Create regression tables from generalized linear model(GLM), generalized estimating equation(GEE), generalized linear mixed-effects model(GLMM), Cox proportional hazards model, survey-weighted generalized linear model(svyglm) and survey-weighted Cox model results for publication.
Author: Jinseob Kim [aut, cre] (<https://orcid.org/0000-0002-9403-605X>),
Zarathu [cph, fnd]
Maintainer: Jinseob Kim <jinseob2kim@gmail.com>
Diff between jstable versions 0.9.3 dated 2020-04-10 and 0.9.4 dated 2020-05-04
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- NEWS.md | 6 ++++++ R/forestcox.R | 6 +++--- inst/doc/jstable.html | 32 ++++++++++++++++---------------- 5 files changed, 33 insertions(+), 27 deletions(-)
Title: Dynamic Generation and Quality Checks of Formula Objects
Description: Many statistical models and analyses in R are implemented through formula objects. The formulaic package creates a unified approach for programmatically and dynamically generating formula objects. Users may specify the outcome and inputs of a model directly, search for variables to include based upon naming patterns, incorporate interactions, and identify variables to exclude. A wide range of quality checks are implemented to identify issues such as misspecified variables, duplication, a lack of contrast in the inputs, and a large number of levels in categorical data. Variables that do not meet these quality checks can be automatically excluded from the model. These issues are documented and reported in a manner that provides greater accountability and useful information to guide an investigation of the data.
Author: David Shilane [aut],
Caffrey Lee [aut, ctb],
Zichen Huang [aut, ctb],
Anderson Nelson [aut, ctb, cre]
Maintainer: Anderson Nelson <an2908@columbia.edu>
Diff between formulaic versions 0.0.6 dated 2020-01-19 and 0.0.7 dated 2020-05-04
DESCRIPTION | 14 MD5 | 36 NAMESPACE | 2 NEWS.md | 7 R/create.formula.R | 54 README.md | 1 build/vignette.rds |binary data/snack.dat.rda |binary inst/doc/Introduction-to-formulaic.R | 101 - inst/doc/Introduction-to-formulaic.Rmd | 157 - inst/doc/Introduction-to-formulaic.html | 2583 +------------------------------- man/add.backtick.Rd | 30 man/create.formula.Rd | 135 - man/reduce.existing.formula.Rd | 90 - man/snack.dat.Rd | 90 - tests/testthat.R | 5 tests/testthat/test-create_formula.R | 56 tests/testthat/test-reduce-formula.R | 4 vignettes/Introduction-to-formulaic.Rmd | 157 - 19 files changed, 551 insertions(+), 2971 deletions(-)
Title: A Convenient API for Accessing United States Census Bureau's
Quarterly Workforce Indicator
Description: The purpose of this package is to access the
United States Census Bureau's Quarterly Workforce Indicator data. Additionally,
the data will be retrieved in a tidy format for further manipulation with full variable
descriptions added if desired. Information about the United States Census Bureau's
Quarterly Workforce Indicator is available at
<https://www.census.gov/data/developers/data-sets/qwi.html>.
Author: Michael DeWitt [aut, cre] (<https://orcid.org/0000-0001-8940-1967>),
Mona Ahmadiani [aut] (<https://orcid.org/0000-0002-1269-5685>),
Adam S. Hyde [aut] (<https://orcid.org/0000-0003-1205-0032>)
Maintainer: Michael DeWitt <me.dewitt.jr@gmail.com>
Diff between tidyqwi versions 0.1.1 dated 2019-06-19 and 0.1.2 dated 2020-05-04
DESCRIPTION | 10 LICENSE | 4 MD5 | 80 +-- NAMESPACE | 32 - NEWS.md | 27 - R/add_qwi_labels.R | 123 ++--- R/check_census_api_call.R | 84 +-- R/check_fips.R | 81 +-- R/get_qwi.R | 610 +++++++++++++------------- R/industry_labels.R | 26 - R/nc_qwi.R | 12 R/owner_codes.R | 22 R/parse_qwi_message.R | 36 - R/qwi_var_names.R | 38 - R/state_info.R | 22 R/utils-pipe.R | 22 R/utils.R | 46 - README.md | 252 +++++----- build/vignette.rds |binary inst/CITATION | 42 - inst/doc/multi_state_year.R | 92 +-- inst/doc/multi_state_year.Rmd | 154 +++--- inst/doc/multi_state_year.html | 723 +++++++++++++++---------------- inst/paper.bib | 202 ++++---- inst/paper.md | 96 ++-- man/add_qwi_labels.Rd | 59 +- man/check_census_api_call.Rd | 62 +- man/converted_fips.Rd | 61 +- man/figures/README-unnamed-chunk-8-1.png |binary man/get_qwi.Rd | 150 +++--- man/industry_labels.Rd | 50 +- man/nc_qwi.Rd | 30 - man/owner_codes.Rd | 46 + man/parse_qwi_message.Rd | 28 - man/pipe.Rd | 24 - man/qwi_var_names.Rd | 62 +- man/show_condition.Rd | 28 - man/state_info.Rd | 48 +- tests/testthat.R | 8 tests/testthat/test.R | 208 ++++---- vignettes/multi_state_year.Rmd | 154 +++--- 41 files changed, 1957 insertions(+), 1897 deletions(-)
Title: Tools for Comparing Text Messages Across Time and Media
Description: A collection of tools for measuring the similarity of text messages and tracing the flow of messages over
time and across media.
Author: Kasper Welbers & Wouter van Atteveldt
Maintainer: Kasper Welbers <kasperwelbers@gmail.com>
Diff between RNewsflow versions 1.2.3 dated 2020-02-17 and 1.2.4 dated 2020-05-04
DESCRIPTION | 9 +- MD5 | 44 ++++++------ R/compare_documents.r | 13 ++- R/cp_sensitive_lookup.r |only R/crossprod.r | 18 +++-- R/deprecated.r | 12 ++- R/feature_preparation.r | 12 ++- data/rnewsflow_dfm.rda |binary inst/doc/RNewsflow.html | 36 +++++++--- man/compare_documents.Rd | 5 + man/delete.duplicates.Rd | 4 - man/docnet.Rd | 4 - man/documents.compare.Rd | 4 - man/newsflow.compare.Rd | 4 - man/rnewsflow_dfm.Rd | 4 - man/tcrossprod_sparse.Rd | 13 ++- src/crossprod.cpp | 22 +++--- src/misc.cpp | 42 ++--------- src/misc.h | 3 src/sim_measures.cpp | 134 ++++++++++++++++++++++++++++++++++++++ src/sim_measures.h | 4 + src/window_corpus_comparison.cpp | 3 src/window_iterator.cpp | 2 tests/testthat/test_lookup_cooc.r |only 24 files changed, 279 insertions(+), 113 deletions(-)
Title: Extremely Fast Implementation of a Naive Bayes Classifier
Description: This is an extremely fast implementation of a Naive Bayes classifier. This
package is currently the only package that supports a Bernoulli distribution, a Multinomial
distribution, and a Gaussian distribution, making it suitable for both binary features,
frequency counts, and numerical features. Another feature is the support of a mix of
different event models. Only numerical variables are allowed, however, categorical variables
can be transformed into dummies and used with the Bernoulli distribution.
The implementation is largely based on the paper
"A comparison of event models for Naive Bayes anti-spam e-mail filtering"
written by K.M. Schneider (2003) <doi:10.3115/1067807.1067848>. Any issues can be
submitted to: <https://github.com/mskogholt/fastNaiveBayes/issues>.
Author: Martin Skogholt
Maintainer: Martin Skogholt <m.skogholt@gmail.com>
Diff between fastNaiveBayes versions 2.2.0 dated 2020-02-23 and 2.2.1 dated 2020-05-04
DESCRIPTION | 8 MD5 | 34 - NEWS.md | 4 R/fnb.bernoulli.R | 3 R/fnb.gaussian.R | 3 R/fnb.multinomial.R | 3 R/fnb.poisson.R | 3 R/fnb.train.R | 3 README.md | 6 build/vignette.rds |binary inst/doc/fastnaivebayes.R | 6 inst/doc/fastnaivebayes.html | 664 +++++++++++++++-------- man/fastNaiveBayesF.Rd | 68 +- man/predict.fastNaiveBayes.Rd | 60 +- man/tweets.Rd | 6 man/tweetsDTM.Rd | 6 man/updateFNB.Rd | 18 tests/testthat/test-fastnaivebayes_multinomial.R | 28 18 files changed, 608 insertions(+), 315 deletions(-)
More information about fastNaiveBayes at CRAN
Permanent link
Title: Automated Method for Verbal Autopsy
Description: Implements multiple existing open-source algorithms for coding cause of death from verbal autopsies. The methods implemented include 'InterVA4' by Byass et al (2012) <doi:10.3402/gha.v5i0.19281>, 'InterVA5' by Byass at al (2019) <doi:10.1186/s12916-019-1333-6>, 'InSilicoVA' by McCormick et al (2016) <doi:10.1080/01621459.2016.1152191>, 'NBC' by Miasnikof et al (2015) <doi:10.1186/s12916-015-0521-2>, and a replication of 'Tariff' method by James et al (2011) <doi:10.1186/1478-7954-9-31> and Serina, et al. (2015) <doi:10.1186/s12916-015-0527-9>. It also provides tools for data manipulation tasks commonly used in Verbal Autopsy analysis and implements easy graphical visualization of individual and population level statistics. The 'NBC' method is implemented by the 'nbc4va' package that can be installed from <https://github.com/rrwen/nbc4va>. Note that this package was not developed by authors affiliated with the Institute for Health Metrics and Evaluation and thus unintentional discrepancies may exist in the implementation of the 'Tariff' method.
Author: Zehang Richard Li, Tyler McCormick, Sam Clark
Maintainer: Zehang Richard Li <lizehang@gmail.com>
Diff between openVA versions 1.0.10 dated 2020-04-19 and 1.0.11 dated 2020-05-04
DESCRIPTION | 8 ++++---- MD5 | 18 +++++++++--------- NEWS.md | 4 ++++ R/CSMF.r | 2 +- R/VAmain.r | 27 ++++++++++++--------------- R/stackplot.r | 4 ---- man/codeVA.Rd | 14 ++++++-------- man/getCSMF.Rd | 2 +- man/plotVA.Rd | 6 +----- man/stackplotVA.Rd | 4 ---- 10 files changed, 38 insertions(+), 51 deletions(-)
Title: Computing General Equilibrium
Description: Developing general equilibrium models, computing general equilibrium and simulating economic dynamics with structural dynamic models in LI (2019, ISBN: 9787521804225) "General Equilibrium and Structural Dynamics: Perspectives of New Structural Economics. Beijing: Economic Science Press".
Author: LI Wu <liwu@staff.shu.edu.cn>
Maintainer: LI Wu <liwu@staff.shu.edu.cn>
Diff between CGE versions 0.3.1 dated 2020-03-25 and 0.3.2 dated 2020-05-04
DESCRIPTION | 6 +++--- MD5 | 18 +++++++++--------- R/sdm.R | 5 +++-- man/Example.MWG.15.B.1.Rd | 2 +- man/Example.MWG.15.B.2.Rd | 2 +- man/Example.MWG.Exercise.15.B.6.Rd | 2 +- man/Example.MWG.Exercise.15.B.9.Rd | 2 +- man/Example.Varian.Exercise.18.2.Rd | 2 +- man/Example.Varian.P352.Rd | 4 ++-- man/sdm.Rd | 8 ++------ 10 files changed, 24 insertions(+), 27 deletions(-)
Title: Download and Load Various Text Datasets
Description: Provides a framework to download, parse, and store text datasets
on the disk and load them when needed. Includes various sentiment lexicons
and labeled text data sets for classification and analysis.
Author: Emil Hvitfeldt [aut, cre] (<https://orcid.org/0000-0002-0679-1945>),
Julia Silge [ctb] (<https://orcid.org/0000-0002-3671-836X>)
Maintainer: Emil Hvitfeldt <emilhhvitfeldt@gmail.com>
Diff between textdata versions 0.4.0 dated 2020-03-06 and 0.4.1 dated 2020-05-04
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- NEWS.md | 2 ++ R/lexicon_afinn.R | 4 ++-- man/catalogue.Rd | 4 +++- 5 files changed, 15 insertions(+), 11 deletions(-)
Title: Interface to 'NetCDF' Datasets
Description: An interface to the 'NetCDF' file formats designed by Unidata
for efficient storage of array-oriented scientific data and descriptions.
Most capabilities of 'NetCDF' version 4 are supported. Optional conversions
of time units are enabled by 'UDUNITS' version 2, also from Unidata.
Author: Pavel Michna [aut],
Milton Woods [aut, cre]
Maintainer: Milton Woods <miltonjwoods@gmail.com>
Diff between RNetCDF versions 2.1-1 dated 2019-10-20 and 2.3-1 dated 2020-05-04
DESCRIPTION | 8 INSTALL | 4 MD5 | 42 +-- NEWS | 3 configure | 599 +++++++++++++++++++++++++++++++++++++-------------- configure.ac | 10 man/var.def.nc.Rd | 2 src/Makevars.win | 8 src/RNetCDF.h | 2 src/attribute.c | 29 +- src/common.c | 76 ++---- src/common.h | 18 - src/convert.c | 286 ++++++++++++++---------- src/convert.h | 13 - src/dataset.c | 33 +- src/dimension.c | 18 - src/group.c | 37 +-- src/init.c | 2 src/type.c | 142 ++++++------ src/udunits.c | 30 +- src/variable.c | 255 ++++++++++----------- tests/RNetCDF-test.R | 2 22 files changed, 975 insertions(+), 644 deletions(-)
Title: Repeated Measures Correlation
Description: Compute the repeated measures correlation, a statistical technique
for determining the overall within-individual relationship among paired measures
assessed on two or more occasions, first introduced by Bland and Altman (1995).
Includes functions for diagnostics, p-value, effect size with confidence
interval including optional bootstrapping, as well as graphing. Also includes
several example datasets.
Author: Jonathan Z. Bakdash, Laura R. Marusich
Maintainer: Laura R. Marusich <laura.m.cooper20.civ@mail.mil>
Diff between rmcorr versions 0.3.0 dated 2018-02-28 and 0.3.1 dated 2020-05-04
DESCRIPTION | 11 MD5 | 24 build/partial.rdb |binary build/vignette.rds |binary inst/doc/Combined_paper_figures.R | 18 inst/doc/Combined_paper_figures.html | 2594 +++++++--------------------------- man/bland1995.Rd | 6 man/gilden2010.Rd | 6 man/plot.rmc.Rd | 15 man/raz2005.Rd | 6 man/rmcorr.Rd | 11 vignettes/plots/AppendixC_Figure1.eps | 991 ++++++------ vignettes/plots/AppendixC_Figure2.eps | 327 ++-- 13 files changed, 1281 insertions(+), 2728 deletions(-)
Title: Dimension Reduction and Estimation Methods
Description: We provide linear and nonlinear dimension reduction techniques.
Intrinsic dimension estimation methods for exploratory analysis are also provided.
For more details on dimensionality techniques, see the paper by
Ma and Zhu (2013) <doi:10.1111/j.1751-5823.2012.00182.x> if you are interested in
statistical approach, or Engel, Huttenberger, and Hamann (2012)
<doi:10.4230/OASIcs.VLUDS.2011.135> for a broader multi-disciplinary overview.
Author: Kisung You [aut, cre] (<https://orcid.org/0000-0002-8584-459X>),
Changhee Suh [ctb]
Maintainer: Kisung You <kyoustat@gmail.com>
Diff between Rdimtools versions 1.0.1 dated 2020-04-22 and 1.0.2 dated 2020-05-04
Rdimtools-1.0.1/Rdimtools/R/auxiliary.R |only Rdimtools-1.0.1/Rdimtools/R/auxiliary_checks.R |only Rdimtools-1.0.1/Rdimtools/R/linear_LMDS.R |only Rdimtools-1.0.2/Rdimtools/DESCRIPTION | 10 Rdimtools-1.0.2/Rdimtools/MD5 | 587 +++++----- Rdimtools-1.0.2/Rdimtools/NEWS.md | 11 Rdimtools-1.0.2/Rdimtools/R/RcppExports.R | 6 Rdimtools-1.0.2/Rdimtools/R/auxchecks.R |only Rdimtools-1.0.2/Rdimtools/R/auxfuncs.R |only Rdimtools-1.0.2/Rdimtools/R/auxiliary_gensamples.R |only Rdimtools-1.0.2/Rdimtools/R/auxiliary_graphnbd.R |only Rdimtools-1.0.2/Rdimtools/R/auxiliary_kernelcov.R |only Rdimtools-1.0.2/Rdimtools/R/auxiliary_pkgstat.R |only Rdimtools-1.0.2/Rdimtools/R/auxiliary_preprocess.R |only Rdimtools-1.0.2/Rdimtools/R/auxiliary_shortestpath.R |only Rdimtools-1.0.2/Rdimtools/R/estimate_Ustat.R | 7 Rdimtools-1.0.2/Rdimtools/R/estimate_clustering.R | 7 Rdimtools-1.0.2/Rdimtools/R/estimate_danco.R | 13 Rdimtools-1.0.2/Rdimtools/R/estimate_gdistnn.R | 7 Rdimtools-1.0.2/Rdimtools/R/estimate_made.R | 7 Rdimtools-1.0.2/Rdimtools/R/estimate_mindkl.R | 13 Rdimtools-1.0.2/Rdimtools/R/estimate_mindml.R | 10 Rdimtools-1.0.2/Rdimtools/R/estimate_mle1.R | 8 Rdimtools-1.0.2/Rdimtools/R/estimate_mle2.R | 8 Rdimtools-1.0.2/Rdimtools/R/estimate_packing.R | 7 Rdimtools-1.0.2/Rdimtools/R/estimate_pcathr.R | 2 Rdimtools-1.0.2/Rdimtools/R/estimate_twonn.R | 17 Rdimtools-1.0.2/Rdimtools/R/linear_ADR.R | 14 Rdimtools-1.0.2/Rdimtools/R/linear_AMMC.R | 8 Rdimtools-1.0.2/Rdimtools/R/linear_ANMM.R | 6 Rdimtools-1.0.2/Rdimtools/R/linear_ASI.R | 16 Rdimtools-1.0.2/Rdimtools/R/linear_BPCA.R | 25 Rdimtools-1.0.2/Rdimtools/R/linear_CCA.R | 5 Rdimtools-1.0.2/Rdimtools/R/linear_CNPE.R | 23 Rdimtools-1.0.2/Rdimtools/R/linear_CRP.R | 18 Rdimtools-1.0.2/Rdimtools/R/linear_CSCORE.R | 8 Rdimtools-1.0.2/Rdimtools/R/linear_CSCOREG.R | 18 Rdimtools-1.0.2/Rdimtools/R/linear_DAGDNE.R | 16 Rdimtools-1.0.2/Rdimtools/R/linear_DISR.R | 18 Rdimtools-1.0.2/Rdimtools/R/linear_DNE.R | 16 Rdimtools-1.0.2/Rdimtools/R/linear_DSPP.R | 18 Rdimtools-1.0.2/Rdimtools/R/linear_ELDE.R | 17 Rdimtools-1.0.2/Rdimtools/R/linear_ELPP2.R | 18 Rdimtools-1.0.2/Rdimtools/R/linear_ESLPP.R | 23 Rdimtools-1.0.2/Rdimtools/R/linear_EXTLPP.R | 7 Rdimtools-1.0.2/Rdimtools/R/linear_FSCORE.R | 8 Rdimtools-1.0.2/Rdimtools/R/linear_ICA.R | 18 Rdimtools-1.0.2/Rdimtools/R/linear_ISOPROJ.R | 37 Rdimtools-1.0.2/Rdimtools/R/linear_KMVP.R | 18 Rdimtools-1.0.2/Rdimtools/R/linear_KUDP.R | 18 Rdimtools-1.0.2/Rdimtools/R/linear_LDA.R | 22 Rdimtools-1.0.2/Rdimtools/R/linear_LDAKM.R | 16 Rdimtools-1.0.2/Rdimtools/R/linear_LDE.R | 17 Rdimtools-1.0.2/Rdimtools/R/linear_LDP.R | 22 Rdimtools-1.0.2/Rdimtools/R/linear_LEA.R | 16 Rdimtools-1.0.2/Rdimtools/R/linear_LFDA.R | 6 Rdimtools-1.0.2/Rdimtools/R/linear_LLP.R | 11 Rdimtools-1.0.2/Rdimtools/R/linear_LLTSA.R | 24 Rdimtools-1.0.2/Rdimtools/R/linear_LPCA.R | 24 Rdimtools-1.0.2/Rdimtools/R/linear_LPE.R | 5 Rdimtools-1.0.2/Rdimtools/R/linear_LPFDA.R | 25 Rdimtools-1.0.2/Rdimtools/R/linear_LPMIP.R | 24 Rdimtools-1.0.2/Rdimtools/R/linear_LPP.R | 16 Rdimtools-1.0.2/Rdimtools/R/linear_LQMI.R | 8 Rdimtools-1.0.2/Rdimtools/R/linear_LSCORE.R | 16 Rdimtools-1.0.2/Rdimtools/R/linear_LSDF.R | 25 Rdimtools-1.0.2/Rdimtools/R/linear_LSIR.R | 7 Rdimtools-1.0.2/Rdimtools/R/linear_LSPE.R | 6 Rdimtools-1.0.2/Rdimtools/R/linear_LSPP.R | 12 Rdimtools-1.0.2/Rdimtools/R/linear_MCFS.R | 16 Rdimtools-1.0.2/Rdimtools/R/linear_MFA.R | 10 Rdimtools-1.0.2/Rdimtools/R/linear_MLIE.R | 18 Rdimtools-1.0.2/Rdimtools/R/linear_MMC.R | 6 Rdimtools-1.0.2/Rdimtools/R/linear_MMP.R | 10 Rdimtools-1.0.2/Rdimtools/R/linear_MMSD.R | 19 Rdimtools-1.0.2/Rdimtools/R/linear_MODP.R | 6 Rdimtools-1.0.2/Rdimtools/R/linear_MSD.R | 19 Rdimtools-1.0.2/Rdimtools/R/linear_MVP.R | 16 Rdimtools-1.0.2/Rdimtools/R/linear_NOLPP.R | 8 Rdimtools-1.0.2/Rdimtools/R/linear_NONPP.R | 8 Rdimtools-1.0.2/Rdimtools/R/linear_NPCA.R | 14 Rdimtools-1.0.2/Rdimtools/R/linear_NPE.R | 37 Rdimtools-1.0.2/Rdimtools/R/linear_NRSR.R | 14 Rdimtools-1.0.2/Rdimtools/R/linear_ODP.R | 16 Rdimtools-1.0.2/Rdimtools/R/linear_OLDA.R | 12 Rdimtools-1.0.2/Rdimtools/R/linear_OLPP.R | 12 Rdimtools-1.0.2/Rdimtools/R/linear_ONPP.R | 22 Rdimtools-1.0.2/Rdimtools/R/linear_PFLPP.R | 14 Rdimtools-1.0.2/Rdimtools/R/linear_PPCA.R | 14 Rdimtools-1.0.2/Rdimtools/R/linear_RLDA.R | 14 Rdimtools-1.0.2/Rdimtools/R/linear_RNDPROJ.R | 14 Rdimtools-1.0.2/Rdimtools/R/linear_RSIR.R | 5 Rdimtools-1.0.2/Rdimtools/R/linear_RSR.R | 18 Rdimtools-1.0.2/Rdimtools/R/linear_SAMMC.R | 13 Rdimtools-1.0.2/Rdimtools/R/linear_SAVE.R | 7 Rdimtools-1.0.2/Rdimtools/R/linear_SDLPP.R | 15 Rdimtools-1.0.2/Rdimtools/R/linear_SIR.R | 7 Rdimtools-1.0.2/Rdimtools/R/linear_SLPE.R | 16 Rdimtools-1.0.2/Rdimtools/R/linear_SLPP.R | 12 Rdimtools-1.0.2/Rdimtools/R/linear_SPC.R | 5 Rdimtools-1.0.2/Rdimtools/R/linear_SPECS.R | 14 Rdimtools-1.0.2/Rdimtools/R/linear_SPECU.R | 15 Rdimtools-1.0.2/Rdimtools/R/linear_SPP.R | 18 Rdimtools-1.0.2/Rdimtools/R/linear_SPUFS.R | 14 Rdimtools-1.0.2/Rdimtools/R/linear_UDFS.R | 16 Rdimtools-1.0.2/Rdimtools/R/linear_UDP.R | 18 Rdimtools-1.0.2/Rdimtools/R/linear_ULDA.R | 14 Rdimtools-1.0.2/Rdimtools/R/nonlinear_CGE.R | 18 Rdimtools-1.0.2/Rdimtools/R/nonlinear_CISOMAP.R | 5 Rdimtools-1.0.2/Rdimtools/R/nonlinear_CRCA.R | 19 Rdimtools-1.0.2/Rdimtools/R/nonlinear_CRDA.R | 28 Rdimtools-1.0.2/Rdimtools/R/nonlinear_DM.R | 16 Rdimtools-1.0.2/Rdimtools/R/nonlinear_DVE.R | 21 Rdimtools-1.0.2/Rdimtools/R/nonlinear_FASTMAP.R | 15 Rdimtools-1.0.2/Rdimtools/R/nonlinear_IDMAP.R | 22 Rdimtools-1.0.2/Rdimtools/R/nonlinear_ILTSA.R | 22 Rdimtools-1.0.2/Rdimtools/R/nonlinear_ISOMAP.R | 14 Rdimtools-1.0.2/Rdimtools/R/nonlinear_ISPE.R | 20 Rdimtools-1.0.2/Rdimtools/R/nonlinear_KECA.R | 17 Rdimtools-1.0.2/Rdimtools/R/nonlinear_KLDE.R | 25 Rdimtools-1.0.2/Rdimtools/R/nonlinear_KLFDA.R | 13 Rdimtools-1.0.2/Rdimtools/R/nonlinear_KLSDA.R | 18 Rdimtools-1.0.2/Rdimtools/R/nonlinear_KMFA.R | 26 Rdimtools-1.0.2/Rdimtools/R/nonlinear_KMMC.R | 14 Rdimtools-1.0.2/Rdimtools/R/nonlinear_KPCA.R | 32 Rdimtools-1.0.2/Rdimtools/R/nonlinear_KSDA.R | 13 Rdimtools-1.0.2/Rdimtools/R/nonlinear_LAMP.R | 13 Rdimtools-1.0.2/Rdimtools/R/nonlinear_LAPEIG.R | 26 Rdimtools-1.0.2/Rdimtools/R/nonlinear_LISOMAP.R | 31 Rdimtools-1.0.2/Rdimtools/R/nonlinear_LLE.R | 5 Rdimtools-1.0.2/Rdimtools/R/nonlinear_LTSA.R | 3 Rdimtools-1.0.2/Rdimtools/R/nonlinear_MVE.R | 5 Rdimtools-1.0.2/Rdimtools/R/nonlinear_MVU.R | 32 Rdimtools-1.0.2/Rdimtools/R/nonlinear_NNP.R | 14 Rdimtools-1.0.2/Rdimtools/R/nonlinear_REE.R | 26 Rdimtools-1.0.2/Rdimtools/R/nonlinear_SAMMON.R | 8 Rdimtools-1.0.2/Rdimtools/R/nonlinear_SNE.R | 31 Rdimtools-1.0.2/Rdimtools/R/nonlinear_SPLAPEIG.R | 19 Rdimtools-1.0.2/Rdimtools/R/nonlinear_SPMDS.R | 7 Rdimtools-1.0.2/Rdimtools/R/nonlinear_TSNE.R | 14 Rdimtools-1.0.2/Rdimtools/R/ver2_linear_ENET.R | 3 Rdimtools-1.0.2/Rdimtools/R/ver2_linear_FA.R | 6 Rdimtools-1.0.2/Rdimtools/R/ver2_linear_LASSO.R | 2 Rdimtools-1.0.2/Rdimtools/R/ver2_linear_LMDS.R |only Rdimtools-1.0.2/Rdimtools/R/ver2_linear_MDS.R | 14 Rdimtools-1.0.2/Rdimtools/R/ver2_linear_PCA.R | 20 Rdimtools-1.0.2/Rdimtools/R/ver2_linear_SPCA.R | 8 Rdimtools-1.0.2/Rdimtools/R/ver2_nonlinear_BMDS.R | 8 Rdimtools-1.0.2/Rdimtools/R/ver2_nonlinear_RPCA.R | 14 Rdimtools-1.0.2/Rdimtools/README.md | 103 + Rdimtools-1.0.2/Rdimtools/build/partial.rdb |binary Rdimtools-1.0.2/Rdimtools/build/vignette.rds |only Rdimtools-1.0.2/Rdimtools/inst/doc |only Rdimtools-1.0.2/Rdimtools/man/aux_gensamples.Rd | 16 Rdimtools-1.0.2/Rdimtools/man/aux_graphnbd.Rd | 11 Rdimtools-1.0.2/Rdimtools/man/aux_kernelcov.Rd | 23 Rdimtools-1.0.2/Rdimtools/man/aux_pkgstat.Rd | 2 Rdimtools-1.0.2/Rdimtools/man/aux_preprocess.Rd | 16 Rdimtools-1.0.2/Rdimtools/man/aux_shortestpath.Rd | 19 Rdimtools-1.0.2/Rdimtools/man/estimate_Ustat.Rd | 7 Rdimtools-1.0.2/Rdimtools/man/estimate_clustering.Rd | 7 Rdimtools-1.0.2/Rdimtools/man/estimate_danco.Rd | 13 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Rdimtools-1.0.2/Rdimtools/man/nonlinear_BMDS.Rd | 8 Rdimtools-1.0.2/Rdimtools/man/nonlinear_CGE.Rd | 16 Rdimtools-1.0.2/Rdimtools/man/nonlinear_CISOMAP.Rd | 3 Rdimtools-1.0.2/Rdimtools/man/nonlinear_CRCA.Rd | 17 Rdimtools-1.0.2/Rdimtools/man/nonlinear_CRDA.Rd | 24 Rdimtools-1.0.2/Rdimtools/man/nonlinear_DM.Rd | 14 Rdimtools-1.0.2/Rdimtools/man/nonlinear_DVE.Rd | 19 Rdimtools-1.0.2/Rdimtools/man/nonlinear_FastMap.Rd | 13 Rdimtools-1.0.2/Rdimtools/man/nonlinear_IDMAP.Rd | 14 Rdimtools-1.0.2/Rdimtools/man/nonlinear_ILTSA.Rd | 20 Rdimtools-1.0.2/Rdimtools/man/nonlinear_ISOMAP.Rd | 10 Rdimtools-1.0.2/Rdimtools/man/nonlinear_ISPE.Rd | 18 Rdimtools-1.0.2/Rdimtools/man/nonlinear_KECA.Rd | 15 Rdimtools-1.0.2/Rdimtools/man/nonlinear_KLDE.Rd | 23 Rdimtools-1.0.2/Rdimtools/man/nonlinear_KLFDA.Rd | 11 Rdimtools-1.0.2/Rdimtools/man/nonlinear_KLSDA.Rd | 16 Rdimtools-1.0.2/Rdimtools/man/nonlinear_KMFA.Rd | 24 Rdimtools-1.0.2/Rdimtools/man/nonlinear_KMMC.Rd | 12 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Rdimtools-1.0.2/Rdimtools/src/RcppExports.cpp | 51 Rdimtools-1.0.2/Rdimtools/src/methods_estimation.cpp | 13 Rdimtools-1.0.2/Rdimtools/src/ver2_linear.cpp | 87 + Rdimtools-1.0.2/Rdimtools/src/ver2_nonlinear.cpp | 4 Rdimtools-1.0.2/Rdimtools/vignettes |only 302 files changed, 2578 insertions(+), 2094 deletions(-)
Title: Simultaneous Generation of Count and Continuous Data
Description: Generation of count (assuming Poisson distribution) and continuous data (using Fleishman polynomials) simultaneously. The details of the method are explained in Demirtas et al. (2012) <DOI:10.1002/sim.5362>.
Author: Hakan Demirtas, Yaru Shi, Rawan Allozi, Ran Gao
Maintainer: Ran Gao <rgao8@uic.edu>
Diff between PoisNonNor versions 1.6.1 dated 2019-05-15 and 1.6.2 dated 2020-05-04
PoisNonNor-1.6.1/PoisNonNor/R/PoisNonNor-internal.R |only PoisNonNor-1.6.2/PoisNonNor/DESCRIPTION | 10 +++++----- PoisNonNor-1.6.2/PoisNonNor/MD5 | 5 ++--- PoisNonNor-1.6.2/PoisNonNor/man/PoisNonNor-package.Rd | 4 ++-- 4 files changed, 9 insertions(+), 10 deletions(-)
Title: Build Graphs for Landscape Genetics Analysis
Description: Build graphs for landscape genetics analysis. This set of
functions can be used to import and convert spatial and genetic data
initially in different formats, import landscape graphs created with
'GRAPHAB' software (Foltete et al., 2012) <doi:10.1016/j.envsoft.2012.07.002>,
make diagnosis plots of isolation by distance relationships in order to
choose how to build genetic graphs, create graphs with a large range of
pruning methods, weight their links with several genetic distances, plot
and analyse graphs, compare them with other graphs. It uses functions from
other packages such as 'adegenet'
(Jombart, 2008) <doi:10.1093/bioinformatics/btn129> and 'igraph' (Csardi
et Nepusz, 2006) <https://bit.ly/35a3V3H>. It also implements methods
commonly used in landscape genetics to create graphs, described by Dyer et
Nason (2004) <doi:10.1111/j.1365-294X.2004.02177.x> and Greenbaum et
Fefferman (2017) <doi:10.1111/mec.14059>, and to analyse distance data
(van Strien et al., 2015) <doi:10.1038/hdy.2014.62>.
Author: Paul Savary
Maintainer: Paul Savary <savarypaul660@gmail.com>
Diff between graph4lg versions 0.3.0 dated 2020-03-19 and 0.5.0 dated 2020-05-04
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graph4lg-0.5.0/graph4lg/R/data.R | 256 ++++------ graph4lg-0.5.0/graph4lg/R/dist_max_corr.R | 15 graph4lg-0.5.0/graph4lg/R/g_percol.R | 4 graph4lg-0.5.0/graph4lg/R/gen_graph_indep.R | 4 graph4lg-0.5.0/graph4lg/R/gen_graph_thr.R | 4 graph4lg-0.5.0/graph4lg/R/gen_graph_topo.R | 79 ++- graph4lg-0.5.0/graph4lg/R/genepop_to_genind.R | 6 graph4lg-0.5.0/graph4lg/R/genind_to_genepop.R | 4 graph4lg-0.5.0/graph4lg/R/graph_modul_compar.R | 10 graph4lg-0.5.0/graph4lg/R/graph_node_compar.R | 8 graph4lg-0.5.0/graph4lg/R/graph_plan.R | 4 graph4lg-0.5.0/graph4lg/R/graph_plot_compar.R | 15 graph4lg-0.5.0/graph4lg/R/graph_to_df.R | 4 graph4lg-0.5.0/graph4lg/R/graph_topo_compar.R | 8 graph4lg-0.5.0/graph4lg/R/graphab_to_igraph.R | 11 graph4lg-0.5.0/graph4lg/R/gstud_to_genind.R | 6 graph4lg-0.5.0/graph4lg/R/loci_to_genind.R | 4 graph4lg-0.5.0/graph4lg/R/mat_gen_dist.R | 4 graph4lg-0.5.0/graph4lg/R/mat_pw_d_jost.R | 10 graph4lg-0.5.0/graph4lg/R/mat_pw_dps.R | 4 graph4lg-0.5.0/graph4lg/R/mat_pw_fst.R | 10 graph4lg-0.5.0/graph4lg/R/mat_pw_gst.R | 10 graph4lg-0.5.0/graph4lg/R/plot_graph_lg.R | 8 graph4lg-0.5.0/graph4lg/R/plot_w_hist.R | 40 + graph4lg-0.5.0/graph4lg/R/pop_gen_index.R | 4 graph4lg-0.5.0/graph4lg/R/pw_mat_to_df.R | 14 graph4lg-0.5.0/graph4lg/R/scatter_dist_g.R | 5 graph4lg-0.5.0/graph4lg/R/structure_to_genind.R | 12 graph4lg-0.5.0/graph4lg/build/partial.rdb |binary graph4lg-0.5.0/graph4lg/data/data_ex_genind.rda |only graph4lg-0.5.0/graph4lg/data/data_ex_gstud.rda |only graph4lg-0.5.0/graph4lg/data/data_ex_loci.rda |only graph4lg-0.5.0/graph4lg/data/pts_pop_ex.rda |only graph4lg-0.5.0/graph4lg/inst/doc/vignette_graph4lg.R | 23 graph4lg-0.5.0/graph4lg/inst/doc/vignette_graph4lg.Rmd | 37 - graph4lg-0.5.0/graph4lg/inst/doc/vignette_graph4lg.html | 104 ++-- graph4lg-0.5.0/graph4lg/inst/extdata/data_ex_str.txt |only graph4lg-0.5.0/graph4lg/inst/extdata/gpop_simul_10_g100_04_20.txt |only graph4lg-0.5.0/graph4lg/inst/extdata/liens_simul_10.csv |only graph4lg-0.5.0/graph4lg/inst/extdata/liens_simul_10.dbf |only graph4lg-0.5.0/graph4lg/inst/extdata/liens_simul_10.fix |only graph4lg-0.5.0/graph4lg/inst/extdata/liens_simul_10.prj |only graph4lg-0.5.0/graph4lg/inst/extdata/liens_simul_10.shp |only graph4lg-0.5.0/graph4lg/inst/extdata/liens_simul_10.shx |only graph4lg-0.5.0/graph4lg/inst/extdata/patches_10.dbf |only graph4lg-0.5.0/graph4lg/inst/extdata/patches_10.fix |only graph4lg-0.5.0/graph4lg/inst/extdata/patches_10.prj |only graph4lg-0.5.0/graph4lg/inst/extdata/patches_10.shp |only graph4lg-0.5.0/graph4lg/inst/extdata/patches_10.shx |only graph4lg-0.5.0/graph4lg/man/add_nodes_attr.Rd | 7 graph4lg-0.5.0/graph4lg/man/convert_cd.Rd | 27 - graph4lg-0.5.0/graph4lg/man/data_ex_genind.Rd |only graph4lg-0.5.0/graph4lg/man/data_ex_gstud.Rd |only graph4lg-0.5.0/graph4lg/man/data_ex_loci.Rd |only graph4lg-0.5.0/graph4lg/man/data_tuto.Rd | 7 graph4lg-0.5.0/graph4lg/man/dist_max_corr.Rd | 15 graph4lg-0.5.0/graph4lg/man/g_percol.Rd | 4 graph4lg-0.5.0/graph4lg/man/gen_graph_indep.Rd | 4 graph4lg-0.5.0/graph4lg/man/gen_graph_thr.Rd | 4 graph4lg-0.5.0/graph4lg/man/gen_graph_topo.Rd | 26 - graph4lg-0.5.0/graph4lg/man/genepop_to_genind.Rd | 6 graph4lg-0.5.0/graph4lg/man/genind_to_genepop.Rd | 4 graph4lg-0.5.0/graph4lg/man/graph_modul_compar.Rd | 10 graph4lg-0.5.0/graph4lg/man/graph_node_compar.Rd | 8 graph4lg-0.5.0/graph4lg/man/graph_plan.Rd | 4 graph4lg-0.5.0/graph4lg/man/graph_plot_compar.Rd | 10 graph4lg-0.5.0/graph4lg/man/graph_to_df.Rd | 4 graph4lg-0.5.0/graph4lg/man/graph_topo_compar.Rd | 8 graph4lg-0.5.0/graph4lg/man/graphab_to_igraph.Rd | 3 graph4lg-0.5.0/graph4lg/man/gstud_to_genind.Rd | 6 graph4lg-0.5.0/graph4lg/man/loci_to_genind.Rd | 4 graph4lg-0.5.0/graph4lg/man/mat_gen_dist.Rd | 4 graph4lg-0.5.0/graph4lg/man/mat_pw_d_j.Rd | 10 graph4lg-0.5.0/graph4lg/man/mat_pw_dps.Rd | 4 graph4lg-0.5.0/graph4lg/man/mat_pw_fst.Rd | 10 graph4lg-0.5.0/graph4lg/man/mat_pw_gst.Rd | 10 graph4lg-0.5.0/graph4lg/man/plot_graph_lg.Rd | 8 graph4lg-0.5.0/graph4lg/man/plot_w_hist.Rd | 11 graph4lg-0.5.0/graph4lg/man/pop_gen_index.Rd | 4 graph4lg-0.5.0/graph4lg/man/pts_pop_ex.Rd |only graph4lg-0.5.0/graph4lg/man/structure_to_genind.Rd | 12 graph4lg-0.5.0/graph4lg/vignettes/vignette_graph4lg.Rmd | 37 - 102 files changed, 634 insertions(+), 590 deletions(-)
Title: 'ggplot2' Based Publication Ready Plots
Description: The 'ggplot2' package is excellent and flexible for elegant data
visualization in R. However the default generated plots requires some formatting
before we can send them for publication. Furthermore, to customize a 'ggplot',
the syntax is opaque and this raises the level of difficulty for researchers
with no advanced R programming skills. 'ggpubr' provides some easy-to-use
functions for creating and customizing 'ggplot2'- based publication ready plots.
Author: Alboukadel Kassambara [aut, cre]
Maintainer: Alboukadel Kassambara <alboukadel.kassambara@gmail.com>
Diff between ggpubr versions 0.2.5 dated 2020-02-13 and 0.3.0 dated 2020-05-04
DESCRIPTION | 25 +++--- MD5 | 140 ++++++++++++++++++------------------- NAMESPACE | 23 +++++- NEWS.md | 27 +++++++ R/compare_means.R | 8 +- R/desc_statby.R | 2 R/facet.R | 29 +++++-- R/geom_bracket.R | 39 ++++++++-- R/geom_exec.R | 1 R/get_legend.R | 14 ++- R/ggarrange.R | 14 ++- R/ggbarplot.R | 125 ++++++++++++++++++++++++++++----- R/ggdotchart.R | 18 +++- R/ggsummarystats.R |only R/ggtext.R | 10 +- R/reexports.R | 4 - R/stat_compare_means.R | 7 + R/stat_cor.R | 3 R/stat_pvalue_manual.R | 1 R/theme_pubr.R | 17 +++- R/utilities.R | 30 +++++-- R/utilities_base.R | 4 - man/add_summary.Rd | 20 ++++- man/annotate_figure.Rd | 18 +++- man/compare_means.Rd | 14 ++- man/diff_express.Rd | 6 + man/facet.Rd | 29 +++++-- man/font.Rd | 3 man/gene_citation.Rd | 6 + man/geom_bracket.Rd | 77 +++++++++++++++----- man/get_legend.Rd | 6 + man/ggadd.Rd | 26 +++++- man/ggarrange.Rd | 27 +++++-- man/ggballoonplot.Rd | 21 ++++- man/ggbarplot.Rd | 48 +++++++++--- man/ggboxplot.Rd | 45 +++++++++-- man/ggdensity.Rd | 38 +++++++--- man/ggdonutchart.Rd | 19 +++-- man/ggdotchart.Rd | 44 ++++++++--- man/ggdotplot.Rd | 40 ++++++++-- man/ggecdf.Rd | 22 ++++- man/ggerrorplot.Rd | 37 +++++++-- man/ggexport.Rd | 15 +++ man/gghistogram.Rd | 43 ++++++++--- man/ggline.Rd | 48 +++++++++--- man/ggmaplot.Rd | 24 ++++-- man/ggpaired.Rd | 36 +++++++-- man/ggpar.Rd | 60 +++++++++++---- man/ggparagraph.Rd | 10 ++ man/ggpie.Rd | 19 +++-- man/ggqqplot.Rd | 28 +++++-- man/ggscatter.Rd | 66 +++++++++++++---- man/ggscatterhist.Rd | 32 ++++++-- man/ggstripchart.Rd | 42 ++++++++--- man/ggsummarystats.Rd |only man/ggtext.Rd | 25 +++++- man/ggtexttable.Rd | 73 +++++++++++++------ man/ggviolin.Rd | 46 +++++++++--- man/grids.Rd | 3 man/reexports.Rd | 5 + man/stat_central_tendency.Rd | 24 ++++-- man/stat_chull.Rd | 25 ++++-- man/stat_compare_means.Rd | 47 ++++++++---- man/stat_conf_ellipse.Rd | 28 +++++-- man/stat_cor.Rd | 38 ++++++---- man/stat_mean.Rd | 23 +++--- man/stat_overlay_normal_density.Rd | 23 +++--- man/stat_pvalue_manual.Rd | 27 +++++-- man/stat_regline_equation.Rd | 31 +++++--- man/stat_stars.Rd | 23 +++--- man/text_grob.Rd | 18 +++- man/theme_pubr.Rd | 21 ++++- 72 files changed, 1472 insertions(+), 518 deletions(-)
Title: Cases of COVID-19 in the United States
Description: A wrapper around the 'COVID Tracking Project API'
<https://covidtracking.com/api/> providing data on cases of COVID-19
in the US.
Author: Amanda Dobbyn [aut, cre]
Maintainer: Amanda Dobbyn <amanda.e.dobbyn@gmail.com>
Diff between covid19us versions 0.1.3 dated 2020-04-29 and 0.1.4 dated 2020-05-04
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- R/get.R | 34 ++++++++++++++++------------------ R/utils.R | 4 ++-- tests/testthat/test-all.R | 2 +- 5 files changed, 26 insertions(+), 28 deletions(-)
Title: Mixture and Flexible Discriminant Analysis
Description: Mixture and flexible discriminant analysis, multivariate
adaptive regression splines (MARS), BRUTO, and vector-response smoothing splines.
Hastie, Tibshirani and Friedman (2009) "Elements of Statistical Learning (second edition, chap 12)" Springer, New York.
Author: S original by Trevor Hastie & Robert Tibshirani. Original R port by Friedrich Leisch, Kurt Hornik and Brian D. Ripley. Balasubramanian Narasimhan has contributed to the upgrading of the code.
Maintainer: Trevor Hastie <hastie@stanford.edu>
Diff between mda versions 0.4-10 dated 2017-11-02 and 0.5 dated 2020-05-04
mda-0.4-10/mda/ChangeLog |only mda-0.4-10/mda/src/rat |only mda-0.5/mda/DESCRIPTION | 17 +-- mda-0.5/mda/MD5 | 64 ++++++------ mda-0.5/mda/R/mars.R | 4 mda-0.5/mda/R/plot.fda.R | 38 ++++--- mda-0.5/mda/README.md |only mda-0.5/mda/inst |only mda-0.5/mda/man/glass.Rd | 2 mda-0.5/mda/src/bruto.f | 30 ++++- mda-0.5/mda/src/bsplvd.f | 31 +++-- mda-0.5/mda/src/bvalue.f | 32 +++--- mda-0.5/mda/src/dcalcvar.f | 14 +- mda-0.5/mda/src/dmarss.f | 189 +++++++++++++++++++++++++----------- mda-0.5/mda/src/dqrreg.f | 4 mda-0.5/mda/src/mda_init.c | 2 mda-0.5/mda/src/mspline.f | 235 ++++++++++++++++++++++++++++----------------- mda-0.5/mda/src/sbart.f | 167 ++++++++++++++++--------------- mda-0.5/mda/src/sinerp.f | 19 ++- mda-0.5/mda/src/sknotl.f | 16 ++- mda-0.5/mda/src/splsm.f | 57 ++++++++-- mda-0.5/mda/src/sslvrg.f | 125 ++++++++++++----------- mda-0.5/mda/src/sspl00.f90 | 4 mda-0.5/mda/tests |only 24 files changed, 651 insertions(+), 399 deletions(-)
Title: Extra 'Recipes' for Text Processing
Description: Converting text to numerical features requires
specifically created procedures, which are implemented as steps
according to the 'recipes' package. These steps allows for
tokenization, filtering, counting (tf and tfidf) and feature hashing.
Author: Emil Hvitfeldt [aut, cre] (<https://orcid.org/0000-0002-0679-1945>)
Maintainer: Emil Hvitfeldt <emilhhvitfeldt@gmail.com>
Diff between textrecipes versions 0.2.0 dated 2020-04-14 and 0.2.1 dated 2020-05-04
DESCRIPTION | 6 ++--- MD5 | 12 +++++----- NEWS.md | 2 + R/tokenfilter.R | 2 - inst/doc/cookbook---using-more-complex-recipes-involving-text.html | 4 +-- tests/testthat/test-lemma.R | 1 tests/testthat/test-tokenlist.R | 2 - 7 files changed, 16 insertions(+), 13 deletions(-)
Title: 'dplyr'-Like Syntax for Summary Statistics of Survey Data
Description: Use piping, verbs like 'group_by' and 'summarize', and other
'dplyr' inspired syntactic style when calculating summary statistics on survey
data using functions from the 'survey' package.
Author: Greg Freedman Ellis [aut, cre],
Thomas Lumley [ctb],
Tomasz Żółtak [ctb],
Ben Schneider [ctb]
Maintainer: Greg Freedman Ellis <greg.freedman@gmail.com>
Diff between srvyr versions 0.3.8 dated 2020-03-07 and 0.3.9 dated 2020-05-04
DESCRIPTION | 10 - MD5 | 35 +++-- NAMESPACE | 3 NEWS.md | 3 R/manip.r | 21 ++- R/s3_register.R |only R/srvyr.r | 9 + R/summarise.r | 2 R/survey_statistics_helpers.R | 5 inst/doc/extending-srvyr.html | 34 +++-- inst/doc/srvyr-database.html | 186 +++++++++++++++---------------- inst/doc/srvyr-vs-survey.html | 8 - man/as_tibble.Rd | 20 +-- man/collect.Rd | 24 ++-- man/pipe.Rd | 22 +-- man/tbl_vars.Rd | 20 +-- tests/testthat/test_as_survey_rep.r | 12 +- tests/testthat/test_as_survey_twophase.r | 4 tests/testthat/utilities.R | 2 19 files changed, 223 insertions(+), 197 deletions(-)
Title: Simulation of Diffusion Processes
Description: It provides users with a wide range of tools to simulate, estimate, analyze, and visualize the dynamics of stochastic differential systems in both forms Ito and Stratonovich. Statistical analysis with parallel Monte Carlo and moment equations methods of SDE's. Enabled many searchers in different domains to use these equations to modeling practical problems in financial and actuarial modeling and other areas of application, e.g., modeling and simulate of first passage time problem in shallow water using the attractive center (Boukhetala K, 1996) ISBN:1-56252-342-2.
Author: Arsalane Chouaib Guidoum [cre, aut],
Kamal Boukhetala [aut]
Maintainer: Arsalane Chouaib Guidoum <acguidoum@usthb.dz>
Diff between Sim.DiffProc versions 4.5 dated 2020-03-29 and 4.6 dated 2020-05-04
Sim.DiffProc-4.5/Sim.DiffProc/vignettes/Figures/fig12.png |only Sim.DiffProc-4.6/Sim.DiffProc/DESCRIPTION | 10 Sim.DiffProc-4.6/Sim.DiffProc/MD5 | 157 - Sim.DiffProc-4.6/Sim.DiffProc/NAMESPACE | 2 Sim.DiffProc-4.6/Sim.DiffProc/R/ABM.R | 4 Sim.DiffProc-4.6/Sim.DiffProc/R/BB.R | 4 Sim.DiffProc-4.6/Sim.DiffProc/R/BM.R | 4 Sim.DiffProc-4.6/Sim.DiffProc/R/Euler.R | 118 - Sim.DiffProc-4.6/Sim.DiffProc/R/GBM.R | 4 Sim.DiffProc-4.6/Sim.DiffProc/R/HWV.R | 4 Sim.DiffProc-4.6/Sim.DiffProc/R/Heun.R | 48 Sim.DiffProc-4.6/Sim.DiffProc/R/MCM.sde.R | 90 Sim.DiffProc-4.6/Sim.DiffProc/R/MEM.sde.r | 542 ++++- Sim.DiffProc-4.6/Sim.DiffProc/R/Milstein.R | 94 Sim.DiffProc-4.6/Sim.DiffProc/R/OU.R | 4 Sim.DiffProc-4.6/Sim.DiffProc/R/PredCorr.R | 46 Sim.DiffProc-4.6/Sim.DiffProc/R/RK.R | 44 Sim.DiffProc-4.6/Sim.DiffProc/R/SMilstein.R | 62 Sim.DiffProc-4.6/Sim.DiffProc/R/STS.R | 70 Sim.DiffProc-4.6/Sim.DiffProc/R/Tex.sde.r | 51 Sim.DiffProc-4.6/Sim.DiffProc/R/bridgesde.R | 154 + Sim.DiffProc-4.6/Sim.DiffProc/R/dsde.r | 4 Sim.DiffProc-4.6/Sim.DiffProc/R/fitsde.R | 4 Sim.DiffProc-4.6/Sim.DiffProc/R/ftpsde.R | 4 Sim.DiffProc-4.6/Sim.DiffProc/R/rsde.R | 4 Sim.DiffProc-4.6/Sim.DiffProc/R/snssde.R | 232 +- Sim.DiffProc-4.6/Sim.DiffProc/R/st.int.R | 4 Sim.DiffProc-4.6/Sim.DiffProc/R/utils.R | 28 Sim.DiffProc-4.6/Sim.DiffProc/R/zzz.r | 6 Sim.DiffProc-4.6/Sim.DiffProc/README.md | 14 Sim.DiffProc-4.6/Sim.DiffProc/build/vignette.rds |binary Sim.DiffProc-4.6/Sim.DiffProc/demo/00Index | 2 Sim.DiffProc-4.6/Sim.DiffProc/demo/Sim.DiffProc.R | 10 Sim.DiffProc-4.6/Sim.DiffProc/inst/CITATION | 3 Sim.DiffProc-4.6/Sim.DiffProc/inst/NEWS.Rd | 11 Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/bridgesde.R | 219 -- Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/bridgesde.Rmd | 277 -- Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/bridgesde.html | 972 +-------- Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/fitsde.R | 4 Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/fitsde.Rmd | 7 Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/fitsde.html | 695 ++---- Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/fptsde.R | 169 - Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/fptsde.Rmd | 163 - Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/fptsde.html | 1039 ++-------- Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/mcmsde.R | 39 Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/mcmsde.Rmd | 29 Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/mcmsde.html | 615 +----- Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/sdetotex.Rmd | 3 Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/sdetotex.html | 474 +--- Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/snssde.R | 243 +- Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/snssde.Rmd | 304 +-- Sim.DiffProc-4.6/Sim.DiffProc/inst/doc/snssde.html | 1199 +++--------- Sim.DiffProc-4.6/Sim.DiffProc/man/MCM.sde.Rd | 9 Sim.DiffProc-4.6/Sim.DiffProc/man/MEM.sde.Rd | 44 Sim.DiffProc-4.6/Sim.DiffProc/man/Sim.DiffProc-package.Rd | 368 --- Sim.DiffProc-4.6/Sim.DiffProc/man/bridgesde1d.Rd | 4 Sim.DiffProc-4.6/Sim.DiffProc/man/bridgesde2d.Rd | 12 Sim.DiffProc-4.6/Sim.DiffProc/man/bridgesde3d.Rd | 13 Sim.DiffProc-4.6/Sim.DiffProc/man/plot2d.Rd | 12 Sim.DiffProc-4.6/Sim.DiffProc/man/snssde1d.Rd | 4 Sim.DiffProc-4.6/Sim.DiffProc/man/snssde2d.Rd | 31 Sim.DiffProc-4.6/Sim.DiffProc/man/snssde3d.Rd | 23 Sim.DiffProc-4.6/Sim.DiffProc/tests/bridgesde.R | 35 Sim.DiffProc-4.6/Sim.DiffProc/tests/snssde.R | 81 Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig007.png |only Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig008.png |only Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig009.png |only Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig04.png |binary Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig10.png |binary Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig1001.png |only Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig1002.png |only Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig1003.png |only Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig1004.png |only Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig1005.png |only Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig1006.png |only Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig1007.png |only Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig1008.png |only Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig1009.png |only Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig1010.png |only Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig1011.png |only Sim.DiffProc-4.6/Sim.DiffProc/vignettes/Figures/fig11.png |binary Sim.DiffProc-4.6/Sim.DiffProc/vignettes/bridgesde.Rmd | 277 -- Sim.DiffProc-4.6/Sim.DiffProc/vignettes/fitsde.Rmd | 7 Sim.DiffProc-4.6/Sim.DiffProc/vignettes/fptsde.Rmd | 163 - Sim.DiffProc-4.6/Sim.DiffProc/vignettes/mcmsde.Rmd | 29 Sim.DiffProc-4.6/Sim.DiffProc/vignettes/sdetotex.Rmd | 3 Sim.DiffProc-4.6/Sim.DiffProc/vignettes/snssde.Rmd | 304 +-- 87 files changed, 3560 insertions(+), 6148 deletions(-)
Title: Manipulation of Microsoft Word and PowerPoint Documents
Description: Access and manipulate 'Microsoft Word' and 'Microsoft PowerPoint' documents from R.
The package focuses on tabular and graphical reporting from R; it also provides two functions
that let users get document content into data objects. A set of functions
lets add and remove images, tables and paragraphs of text in new or existing documents.
When working with 'PowerPoint' presentations, slides can be added or removed; shapes inside
slides can also be added or removed. When working with 'Word' documents, a cursor can be
used to help insert or delete content at a specific location in the document. The package
does not require any installation of Microsoft products to be able to write Microsoft files.
Author: David Gohel [aut, cre],
Frank Hangler [ctb] (function body_replace_all_text),
Liz Sander [ctb] (several documentation fixes),
Anton Victorson [ctb] (fixes xml structures),
Jon Calder [ctb] (update vignettes),
John Harrold [ctb] (fuction annotate_base),
John Muschelli [ctb] (google doc compatibility)
Maintainer: David Gohel <david.gohel@ardata.fr>
Diff between officer versions 0.3.8 dated 2020-03-13 and 0.3.9 dated 2020-05-04
DESCRIPTION | 8 MD5 | 117 +++++----- NAMESPACE | 25 ++ NEWS | 12 + R/docx_add.R | 89 ++++---- R/formatting_properties.R | 14 + R/get_reference_templates.R | 6 R/ooxml_block_objects.R | 397 +++++++++++++++++++++++++++++------- R/ooxml_run_objects.R | 108 +++++++-- R/ph_location.R | 7 R/ppt_ph_with_methods.R | 134 +++++++----- R/pptx_informations.R | 49 ++++ R/read_docx.R | 61 ++--- R/utils.R | 12 + build/vignette.rds |binary inst/doc_examples/text.txt |only man/annotate_base.Rd | 1 man/block_caption.Rd | 5 man/block_list.Rd | 3 man/block_pour_docx.Rd |only man/block_section.Rd | 17 + man/block_table.Rd | 47 +--- man/block_toc.Rd | 3 man/body_add.Rd | 60 ++--- man/body_add_blocks.Rd | 12 + man/body_add_break.Rd | 12 + man/body_add_docx.Rd | 12 + man/body_add_fpar.Rd | 11 man/body_add_gg.Rd | 12 + man/body_add_img.Rd | 12 + man/body_add_par.Rd | 12 + man/body_add_table.Rd | 12 + man/body_add_toc.Rd | 12 + man/color_scheme.Rd | 1 man/external_img.Rd | 6 man/fpar.Rd | 3 man/ftext.Rd | 6 man/layout_properties.Rd | 1 man/layout_summary.Rd | 1 man/length.rpptx.Rd | 1 man/page_mar.Rd | 7 man/page_size.Rd | 7 man/ph_with.Rd | 124 ++++++----- man/plot_instr.Rd | 1 man/plot_layout_properties.Rd |only man/prop_section.Rd | 20 + man/prop_table.Rd |only man/read_docx.Rd | 24 +- man/run_autonum.Rd | 13 + man/run_columnbreak.Rd | 11 man/run_linebreak.Rd | 6 man/run_pagebreak.Rd | 6 man/run_reference.Rd | 11 man/run_seqfield.Rd | 11 man/section_columns.Rd |only man/slide_size.Rd | 1 man/slide_summary.Rd | 1 man/styles_info.Rd | 10 man/table_colwidths.Rd |only man/table_conditional_formatting.Rd |only man/table_layout.Rd |only man/table_width.Rd |only man/unordered_list.Rd | 3 tests/testthat/test-block_list.R | 1 64 files changed, 1142 insertions(+), 416 deletions(-)
Title: General Smoothing Splines
Description: A comprehensive package for structural multivariate
function estimation using smoothing splines.
Author: Chong Gu <chong@purdue.edu>
Maintainer: Chong Gu <chong@purdue.edu>
Diff between gss versions 2.1-11 dated 2020-02-29 and 2.2-0 dated 2020-05-04
ChangeLog | 18 ++++ DESCRIPTION | 10 +- INDEX | 23 +++++- MD5 | 117 ++++++++++++++++--------------- NAMESPACE | 9 +- R/family.R | 174 +++++++++++++++++++++++++++++++++++++++++++++-- R/family.cv.R | 51 +++++++++++-- R/family.proj.R | 93 +++++++++++++++++++++++++ R/fitted.R | 13 +++ R/gssanova.R | 78 ++++++++++++++++++--- R/gssanova0.R | 95 ++++++++++++++++++++++++- R/gssanova1.R | 55 ++++++++++++-- R/nlm0.R | 2 R/predict1.ssanova.R | 2 R/predict9.gssanova.R |only R/project.gssanova.R | 63 ++++++++++++++--- R/summary.gssanova.R | 12 ++- R/summary.gssanova0.R | 13 +++ data/datalist | 1 data/wesdr1.rda |only inst/CITATION | 2 man/cdsscden.Rd | 2 man/cdssden.Rd | 2 man/family.Rd | 17 ++++ man/gauss.quad.Rd | 2 man/gssanova.Rd | 7 + man/gssanova0.Rd | 7 + man/hzdrate.sshzd.Rd | 2 man/mkcov.Rd | 3 man/mkfun.poly.Rd | 3 man/mkfun.tp.Rd | 3 man/mkint.Rd | 5 - man/mkran.Rd | 3 man/mkrk.nominal.Rd | 3 man/mkterm.Rd | 7 - man/nlm0.Rd | 2 man/predict.ssanova.Rd | 8 +- man/predict.sscox.Rd | 5 - man/predict.ssllrm.Rd | 3 man/predict9.gssanova.Rd |only man/project.Rd | 7 - man/smolyak.Rd | 2 man/ssanova.Rd | 1 man/ssanova0.Rd | 1 man/ssanova9.Rd | 1 man/sscden.Rd | 1 man/sscopu.Rd | 4 - man/sscox.Rd | 1 man/sshzd.Rd | 1 man/ssllrm.Rd | 1 man/summary.gssanova.Rd | 3 man/summary.gssanova0.Rd | 3 man/summary.ssanova.Rd | 3 man/wesdr1.Rd |only src/copu2newton.f | 2 src/dchdc0.f |only src/dmudr0.f | 2 src/drkl.f | 2 src/dsidr0.f | 2 src/init.c | 4 + src/ratfor/copu2newton.r | 2 src/ratfor/drkl.r | 2 62 files changed, 780 insertions(+), 180 deletions(-)
Title: Decomposition of Bulk Expression with Single-Cell Sequencing
Description: Provides tools to accurately estimate cell type abundances
from heterogeneous bulk expression. A reference-based method utilizes
single-cell information to generate a signature matrix and transformation
of bulk expression for accurate regression based estimates. A marker-based
method utilizes known cell-specific marker genes to measure relative
abundances across samples.
For more details, see Jew and Alvarez et al (2019) <doi:10.1101/669911>.
Author: Brandon Jew [aut, cre],
Marcus Alvarez [aut]
Maintainer: Brandon Jew <brandon.jew@ucla.edu>
Diff between BisqueRNA versions 1.0.2 dated 2020-03-19 and 1.0.3 dated 2020-05-04
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/reference_based.R | 14 ++++++++++---- build/vignette.rds |binary 4 files changed, 17 insertions(+), 11 deletions(-)
Title: Heatmap-Related Plots and Smooth Multiband Color Interpolation
Description: Supports combined contour-heat plots and 3D bar/surface plots, for plotting scalar fields, either discretely-spaced or continuously-spaced. Also, supports matrix visualization (per se), isosurfaces (for scalar fields over three variables), triangular plots and vector fields. All plots use static vector graphics (suitable for Sweave documents), but high resolution heatmaps can produce smooth raster-like visual effects. Contains a flexible system for smooth multiband color interpolation in RGB, HSV and HCL color spaces.
Author: Abby Spurdle
Maintainer: Abby Spurdle <spurdle.a@gmail.com>
Diff between barsurf versions 0.4.0 dated 2020-02-13 and 0.5.0 dated 2020-05-04
barsurf-0.4.0/barsurf/man/13_sample_functions.Rd |only barsurf-0.4.0/barsurf/man/14_fitting_litmus_objects_to_data.Rd |only barsurf-0.4.0/barsurf/man/15_deprecated.Rd |only barsurf-0.5.0/barsurf/DESCRIPTION | 8 barsurf-0.5.0/barsurf/MD5 | 56 - barsurf-0.5.0/barsurf/NAMESPACE | 4 barsurf-0.5.0/barsurf/R/color.r | 66 + barsurf-0.5.0/barsurf/R/init.r | 5 barsurf-0.5.0/barsurf/R/litmus.r | 332 ++-------- barsurf-0.5.0/barsurf/R/litmus_2.r |only barsurf-0.5.0/barsurf/R/other.r | 164 +++- barsurf-0.5.0/barsurf/R/plot2d.r | 205 +++--- barsurf-0.5.0/barsurf/R/plot3d.r | 70 +- barsurf-0.5.0/barsurf/R/plot3v.r | 63 + barsurf-0.5.0/barsurf/inst/doc/barsurf.R | 208 +++--- barsurf-0.5.0/barsurf/inst/doc/barsurf.Rnw | 109 +-- barsurf-0.5.0/barsurf/inst/doc/barsurf.pdf |binary barsurf-0.5.0/barsurf/man/01_scalar_fields_discretely-spaced.Rd | 83 +- barsurf-0.5.0/barsurf/man/02_scalar_fields_continuously-spaced_.Rd | 51 - barsurf-0.5.0/barsurf/man/03_plot_contour_3d.Rd | 79 +- barsurf-0.5.0/barsurf/man/04_plot_cfield_3d.Rd | 33 barsurf-0.5.0/barsurf/man/05_vector_fields.Rd | 31 barsurf-0.5.0/barsurf/man/07_barface_objects.Rd | 42 - barsurf-0.5.0/barsurf/man/08_litmus_objects.Rd | 78 +- barsurf-0.5.0/barsurf/man/09_multi-litmus_objects.Rd | 21 barsurf-0.5.0/barsurf/man/10_supporting_methods.Rd | 4 barsurf-0.5.0/barsurf/man/11_other_supporting_functions_1.Rd | 4 barsurf-0.5.0/barsurf/man/12_other_supporting_functions_2.Rd | 26 barsurf-0.5.0/barsurf/man/13_other_supporting_functions_3.Rd |only barsurf-0.5.0/barsurf/man/14_sample_functions.Rd |only barsurf-0.5.0/barsurf/man/15_fitting_litmus_objects_to_data.Rd |only barsurf-0.5.0/barsurf/man/16_deprecated.Rd |only barsurf-0.5.0/barsurf/vignettes/barsurf.Rnw | 109 +-- 33 files changed, 932 insertions(+), 919 deletions(-)
Title: Descriptive Statistics 'OpenBudgets.eu'
Description: Estimate and return the needed parameters for visualizations designed for 'OpenBudgets.eu' <http://openbudgets.eu/> datasets. Calculate descriptive statistical measures in budget data of municipalities across Europe, according to the 'OpenBudgets.eu' data model. There are functions for measuring central tendency and dispersion of amount variables along with their distributions and correlations and the frequencies of categorical variables for a given dataset. Also, can be used generally to other datasets, to extract visualization parameters, convert them to 'JSON' format and use them as input in a different graphical interface.
Author: Kleanthis Koupidis [aut, cre],
Aikaterini Chatzopoulou [aut],
Charalampos Bratsas [aut]
Maintainer: Kleanthis Koupidis <koupidis@okfn.gr>
Diff between DescriptiveStats.OBeu versions 1.3.1 dated 2019-01-20 and 1.3.2 dated 2020-05-04
DESCRIPTION | 12 MD5 | 30 - NEWS.md | 5 README.md | 73 ++- build/vignette.rds |binary inst/doc/DescriptiveStats.R | 24 - inst/doc/DescriptiveStats.html | 386 +++++++++++++++---- inst/doc/DescriptiveStatsOPENCPU.R | 4 inst/doc/DescriptiveStatsOPENCPU.html | 350 ++++++++++++++--- inst/doc/DescriptiveStatsObeu.R | 24 - inst/doc/DescriptiveStatsObeu.Rmd | 4 inst/doc/DescriptiveStatsObeu.html | 686 ++++++++++++++++------------------ man/Wuppertal_df.Rd | 4 man/Wuppertal_openspending.Rd | 4 man/sample_json_link_openspending.Rd | 4 vignettes/DescriptiveStatsObeu.Rmd | 4 16 files changed, 1059 insertions(+), 555 deletions(-)
More information about DescriptiveStats.OBeu at CRAN
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