Fri, 14 Aug 2020

Package neonstore updated to version 0.2.0 with previous version 0.1.2 dated 2020-08-11

Title: NEON Data Store
Description: The National Ecological Observatory Network (NEON) provides access to its numerous data products through its REST API, <https://data.neonscience.org/data-api/>. This package provides a high-level user interface for downloading and storing NEON data products. While each of NEON data products consist of hundreds or thousands of individual files. Unlike 'neonUtilities', this package will avoid repeated downloading, provides persistent storage, and improves performance. This package does not provide expose interactions with the individual low-level NEON API endpoints.
Author: Carl Boettiger [aut, cre] (<https://orcid.org/0000-0002-1642-628X>), Quinn Thomas [ctb], Christine Laney [aut] (<https://orcid.org/0000-0002-4944-2083>)
Maintainer: Carl Boettiger <cboettig@gmail.com>

Diff between neonstore versions 0.1.2 dated 2020-08-11 and 0.2.0 dated 2020-08-14

 DESCRIPTION       |    8 ++---
 MD5               |   13 ++++----
 NAMESPACE         |    1 
 NEWS.md           |only
 R/neon_data.R     |   21 +++++++++----
 R/neon_download.R |   38 ++++++++++++++++--------
 R/neon_read.R     |   25 ++++++++++++++++
 README.md         |   83 +++++++++++++++++++++++++++++-------------------------
 8 files changed, 123 insertions(+), 66 deletions(-)

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Package fabricerin updated to version 0.1.2 with previous version 0.1.0 dated 2020-08-01

Title: Create Easily Canvas in 'shiny' and 'RMarkdown' Documents
Description: Allows the user to implement easily canvas elements within a 'shiny' app or an 'RMarkdown' document. The user can create shapes, images and text elements within the canvas which can also be used as a drawing tool for taking notes. The package relies on the 'fabricjs' 'JavaScript' library. See <http://fabricjs.com/>.
Author: Mohamed El Fodil Ihaddaden [aut, cre], Garrick Aden-Buie [ctb], fabricjs contributors [ctb, cph] (fabricjs JavaScript library), jQuery contributors [ctb, cph] (jQuery JavaScript library), FileSaver.js contributors [ctb, cph] (FileSaver JavaScript library)
Maintainer: Mohamed El Fodil Ihaddaden <ihaddaden.fodeil@gmail.com>

Diff between fabricerin versions 0.1.0 dated 2020-08-01 and 0.1.2 dated 2020-08-14

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 fabricerin-0.1.2/fabricerin/R/fabric_dependency.R        |only
 fabricerin-0.1.2/fabricerin/R/fabric_drawing.R           |   70 +++++--
 fabricerin-0.1.2/fabricerin/R/fabric_image.R             |    4 
 fabricerin-0.1.2/fabricerin/R/fabric_image_add.R         |    9 
 fabricerin-0.1.2/fabricerin/R/fabric_shape.R             |  138 +++++++++++++--
 fabricerin-0.1.2/fabricerin/R/fabric_shape_add.R         |  138 +++++++++++++--
 fabricerin-0.1.2/fabricerin/R/fabric_text.R              |    3 
 fabricerin-0.1.2/fabricerin/R/fabric_text_add.R          |    1 
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 fabricerin-0.1.2/fabricerin/README.md                    |   68 ++-----
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 30 files changed, 388 insertions(+), 163 deletions(-)

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Package RAMClustR (with last version 1.0.9) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2019-09-20 1.0.9

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Package ForecastFramework (with last version 0.10.3) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2020-01-16 0.10.3
2019-11-03 0.10.2
2019-06-11 0.10.1

Permanent link
Package BayesSummaryStatLM (with last version 1.0-1) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2015-03-02 1.0-1
2015-02-25 1.0

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Package planor (with last version 1.5-3) was removed from CRAN

Previous versions (as known to CRANberries) which should be available via the Archive link are:

2020-03-18 1.5-3
2019-05-21 1.5-1

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New package met with initial version 0.1.0
Package: met
Type: Package
Title: Evaluating and Improving Matched Samples in Observational Studies
Version: 0.1.0
Author: Ruoqi Yu
Maintainer: Ruoqi Yu <ruoqiyu@wharton.upenn.edu>
Description: Evaluate covariate balance of a matched sample, and suggest a new feature that the new match should balance if the current match is not satisfactory (only available with method being generalized Kolmogorov-Smirnov statistic on a finite set, GFKS for short).
License: MIT+file LICENSE
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.5.0)
Imports: stats, DiPs
Suggests: optmatch
NeedsCompilation: no
Packaged: 2020-08-09 04:07:27 UTC; ruoqi
Repository: CRAN
Date/Publication: 2020-08-14 14:10:03 UTC

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New package geometries with initial version 0.1.0
Package: geometries
Type: Package
Title: Convert Between R Objects and Geometric Structures
Date: 2020-08-02
Version: 0.1.0
Authors@R: c( person("David", "Cooley", ,"david.cooley.au@gmail.com", role = c("aut", "cre")) )
Description: Geometry shapes in 'R' are typically represented by matrices (points, lines), with more complex shapes being lists of matrices (polygons). 'Geometries' will convert various 'R' objects into these shapes. Conversion functions are available at both the 'R' level, and through 'Rcpp'.
License: MIT + file LICENSE
URL: https://dcooley.github.io/geometries/
BugReports: https://github.com/dcooley/geometries/issues
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
SystemRequirements: C++11
LinkingTo: Rcpp
Imports: Rcpp
Suggests: knitr, rmarkdown, tinytest, covr
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2020-08-09 21:32:31 UTC; dave
Author: David Cooley [aut, cre]
Maintainer: David Cooley <david.cooley.au@gmail.com>
Repository: CRAN
Date/Publication: 2020-08-14 14:20:03 UTC

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New package raveio with initial version 0.0.3
Package: raveio
Type: Package
Title: Utility Toolbox for RAVE Project
Version: 0.0.3
Language: en-US
Authors@R: c( person("Zhengjia", "Wang", email = "dipterix.wang@gmail.com", role = c("aut", "cre")), person("Beauchamp lab", email = "beauchamplab@gmail.com", role = c("cph", "fnd")) )
Description: Includes multiple cross-platform read/write interfaces for 'RAVE' project. 'RAVE' stands for "R analysis and visualization of human intracranial electroencephalography data". The whole project aims at providing powerful free-source package that analyze brain recordings from patients with electrodes placed on the cortical surface or inserted into the brain. 'raveio' as part of this project provides tools to read/write neurophysiology data from/to 'RAVE' file structure, as well as several popular formats including 'EDF(+)', 'Matlab', 'BIDS-iEEG', and 'HDF5', etc. Documentation and examples about 'RAVE' project are provided at <https://openwetware.org/wiki/RAVE>, and the paper by John F. Magnotti, Zhengjia Wang, Michael S. Beauchamp (2020) <doi:10.1101/2020.06.02.129676>, the paper by Brian A. Metzger, John F. Magnotti, Zhengjia Wang, Elizabeth Nesbitt, Patrick J. Karas, Daniel Yoshor, Michael S. Beauchamp (2020) <doi:10.1523/JNEUROSCI.0279-20.2020>, and the paper by Patrick J. Karas, John F. Magnotti, Brian A. Metzger, Lin L. Zhu, Kristen B. Smith, Daniel Yoshor, Michael S. Beauchamp (2019) <doi:10.7554/eLife.48116>; see 'citation("raveio")' for details.
BugReports: https://github.com/beauchamplab/raveio/issues
URL: https://beauchamplab.github.io/raveio/
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Depends: R (>= 3.6.0)
Imports: utils, data.table, parallel, yaml (>= 2.2.1), hdf5r, fst (>= 0.9.2), dipsaus (>= 0.0.9), R.matlab (>= 3.6.2), glue, later, stringr (>= 1.4.0), rlang (>= 0.4.7), edfReader (>= 1.2.1), lazyarray (>= 1.1.0), ini (>= 0.3.1), jsonlite (>= 1.7.0), R6
Suggests: pryr, spelling, testthat
NeedsCompilation: no
Packaged: 2020-08-08 03:01:08 UTC; beauchamplab
Author: Zhengjia Wang [aut, cre], Beauchamp lab [cph, fnd]
Maintainer: Zhengjia Wang <dipterix.wang@gmail.com>
Repository: CRAN
Date/Publication: 2020-08-14 13:50:03 UTC

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New package powerLATE with initial version 0.1.0
Package: powerLATE
Type: Package
Title: Generalized Power Analysis for LATE
Version: 0.1.0
Authors@R: c( person("Kirk", "Bansak", , "kbansak@ucsd.edu", c("aut")), person("Eddie", "Yang", , "z5yang@ucsd.edu", c("aut", "cre")) )
Maintainer: Eddie Yang <z5yang@ucsd.edu>
Description: An implementation of the generalized power analysis for the local average treatment effect (LATE), proposed by Bansak (2020) <doi:10.1214/19-STS732>. Power analysis is in the context of estimating the LATE (also known as the complier average causal effect, or CACE), with calculations based on a test of the null hypothesis that the LATE equals 0 with a two-sided alternative. The method uses standardized effect sizes to place a conservative bound on the power under minimal assumptions. Package allows users to recover power, sample size requirements, or minimum detectable effect sizes. Package also allows users to work with absolute effects rather than effect sizes, to specify an additional assumption to narrow the bounds, and to incorporate covariate adjustment.
License: GPL (>= 2)
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
URL: https://github.com/kbansak/powerLATE
BugReports: https://github.com/kbansak/powerLATE/issues
Suggests: covr
NeedsCompilation: no
Packaged: 2020-08-08 19:57:27 UTC; eddie
Author: Kirk Bansak [aut], Eddie Yang [aut, cre]
Repository: CRAN
Date/Publication: 2020-08-14 13:50:09 UTC

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Package libcoin updated to version 1.0-6 with previous version 1.0-5 dated 2019-08-27

Title: Linear Test Statistics for Permutation Inference
Description: Basic infrastructure for linear test statistics and permutation inference in the framework of Strasser and Weber (1999) <https://epub.wu.ac.at/102/>. This package must not be used by end-users. CRAN package 'coin' implements all user interfaces and is ready to be used by anyone.
Author: Torsten Hothorn [aut, cre]
Maintainer: Torsten Hothorn <Torsten.Hothorn@R-project.org>

Diff between libcoin versions 1.0-5 dated 2019-08-27 and 1.0-6 dated 2020-08-14

 DESCRIPTION                     |   10 
 MD5                             |   36 -
 build/vignette.rds              |binary
 inst/NEWS.Rd                    |    9 
 inst/doc/libcoin.R              |   24 
 inst/doc/libcoin.Rnw            | 1098 +++++++++++++++++--------------
 inst/doc/libcoin.pdf            |binary
 inst/include/libcoin.h          |    6 
 inst/include/libcoinAPI.h       |   10 
 inst/include/libcoin_internal.h |    4 
 src/libcoin-init.c              |    2 
 src/libcoin.c                   |   41 +
 src/libcoin.h                   |    6 
 src/libcoinAPI.h                |   10 
 src/libcoin_internal.h          |    4 
 tests/regtest_libcoin.R         |   88 +-
 tests/regtest_libcoin.Rout.save |   92 +-
 vignettes/libcoin.Rnw           | 1098 +++++++++++++++++--------------
 vignettes/libcoin.Rout.save     | 1389 ++++++++++++++++++++--------------------
 19 files changed, 2133 insertions(+), 1794 deletions(-)

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New package fastmatrix with initial version 0.2
Type: Package
Package: fastmatrix
Title: Fast Computation of some Matrices Useful in Statistics
Version: 0.2
Authors@R: c(person(given = "Felipe", family = "Osorio", role = c("aut", "cre"), email = "felipe.osorios@usm.cl", comment = c(ORCID = "0000-0002-4675-5201")), person(given = "Alonso", family = "Ogueda", role = "aut", email = "alonso.ogueda@gmail.com"))
Description: Small set of functions to fast computation of some matrices and operations useful in statistics.
Author: Felipe Osorio [aut, cre] (<https://orcid.org/0000-0002-4675-5201>), Alonso Ogueda [aut]
Maintainer: Felipe Osorio <felipe.osorios@usm.cl>
Depends: R (>= 2.10)
License: GPL-3
URL: https://faosorios.github.io/fastmatrix/
LazyLoad: yes
NeedsCompilation: yes
Packaged: 2020-08-09 01:04:17 UTC; felipe
Repository: CRAN
Date/Publication: 2020-08-14 13:50:12 UTC

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Package csodata updated to version 1.0.2 with previous version 1.0.1.1 dated 2020-03-12

Title: Download Data from the CSO 'StatBank' API
Description: Imports 'StatBank' data in JSON-stat format and (optionally) reshapes it into wide format. The Central Statistics Office (CSO) is the national statistical institute of Ireland and 'StatBank' is the CSOs online database of Official Statistics. This database contains current and historical data series compiled from CSO statistical releases and is accessed at <http://www.cso.ie/px/pxeirestat/statire/SelectTable/Omrade0.asp?Planguage=0>. A tutorial explaining and illustrating how to navigate to the 'StatBank' and how to search the 'StatBank' by keyword or theme can be found here: <https://www.cso.ie/en/interactivezone/youtubevideos/statbanktutorial/>. This tutorial also demonstrates how a user can create, edit and download a table from the 'StatBank'. The CSO 'StatBank' Application Programming Interface (API), which is accessed in this package, provides access to 'StatBank' data in JSON-stat format at <https://statbank.cso.ie/webserviceclient/>. This dissemination tool allows developers machine to machine access to CSO 'StatBank' data.
Author: Eoin Horgan [aut] (<https://orcid.org/0000-0002-3446-6154>), Conor Crowley [aut, cre], Mervyn O'Luing [aut]
Maintainer: Conor Crowley <conor.crowley@cso.ie>

Diff between csodata versions 1.0.1.1 dated 2020-03-12 and 1.0.2 dated 2020-08-14

 DESCRIPTION                     |    8 +-
 MD5                             |   40 ++++++-------
 NAMESPACE                       |    2 
 NEWS.md                         |    4 +
 R/cso_get_geo.R                 |    9 ++
 inst/doc/quick_start_guide.R    |   14 ++--
 inst/doc/quick_start_guide.html |   17 +++--
 man/cso_clear_cache.Rd          |   46 +++++++--------
 man/cso_disp_geo_meta.Rd        |   42 ++++++-------
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 man/cso_get_content.Rd          |   54 +++++++++--------
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 man/cso_get_geo_meta.Rd         |   64 ++++++++++----------
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 man/cso_get_toc.Rd              |   80 +++++++++++++-------------
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 21 files changed, 525 insertions(+), 514 deletions(-)

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New package bsem with initial version 1.0.0
Package: bsem
Type: Package
Title: Bayesian Structural Equation Models
Version: 1.0.0
Authors@R: c(person(given = "Renato", family = "Panaro", role = c("aut", "cre"), email = "renatovp@ime.usp.br", comment = c(ORCID = "0000-0002-1903-2091", URL= "https://rvpanaro.github.io/")), person(given = "Vinícius", family = "Mayrink", role = "aut", email = "vdinizm@gmail.com", comment = c(ORCID = "0000-0002-5683-8326", URL= "http://www.est.ufmg.br/~vdinizm/")), person(given = "Marcelo", family = "Costa", role = "aut", email = "macosta.est@gmail.com", comment = c(URL= "http://somos.ufmg.br/professor/marcelo-azevedo-costa")) )
Maintainer: Renato Panaro <renatovp@ime.usp.br>
Description: Flexible routines to allow structural equation modeling particular cases using 'rstan' integration. 'bsem' includes Bayesian semi Confirmatory Factor Analysis, Confirmatory Factor Analysis, and Structural Equation Model. VD Mayrink (2013) <doi:10.1214/12-AOAS607>.
License: GPL-3
Biarch: true
Depends: R (>= 3.5.0), coda (>= 0.19-3), lattice (>= 0.20-38), magrittr (>= 1.5), viridis (>= 0.5.1)
Imports: visNetwork (>= 2.0.9), shiny (>= 1.5.0), methods, Rcpp (>= 0.12.0), rstan (>= 2.18.1), rstantools (>= 1.5.1), DiagrammeR (>= 1.0.5)
LinkingTo: BH (>= 1.66.0), Rcpp (>= 0.12.0), RcppEigen (>= 0.3.3.3.0), rstan (>= 2.18.1), StanHeaders (>= 2.18.0)
Suggests: knitr, devtools, roxygen2, testthat (>= 2.1.0), covr, rmarkdown, bayesplot, tidybayes, ggplot2, gridExtra (>= 2.3), shinythemes (>= 1.1.2), ggfortify (>= 0.4.1), shinyjs (>= 1.1), shinycssloaders (>= 0.3), plotly (>= 4.9.2.1), ggridges (>= 0.5.2), fmsb (>= 0.5.3), visdat (>= 0.5.3), DT (>= 0.14), tidyr (>= 1.1.0), dplyr (>= 1.0.0), reshape2 (>= 1.4.4)
Encoding: UTF-8
LazyData: true
SystemRequirements: GNU make
BugReports: https://github.com/rvpanaro/bsem/issues
VignetteBuilder: knitr
RoxygenNote: 7.1.1
URL: https://github.com/rvpanaro/bsem
NeedsCompilation: yes
Packaged: 2020-08-08 01:48:31 UTC; renato
Author: Renato Panaro [aut, cre] (<https://orcid.org/0000-0002-1903-2091>, https://rvpanaro.github.io/), Vinícius Mayrink [aut] (<https://orcid.org/0000-0002-5683-8326>, http://www.est.ufmg.br/~vdinizm/), Marcelo Costa [aut] (http://somos.ufmg.br/professor/marcelo-azevedo-costa)
Repository: CRAN
Date/Publication: 2020-08-14 13:40:03 UTC

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Package aimsir17 updated to version 0.0.2 with previous version 0.0.1 dated 2019-12-02

Title: Irish Weather Observing Stations Hourly Records for 2017
Description: Named after the Irish name for weather, this package contains tidied data from the Irish Meteorological Service's hourly observations for 2017. In all, the data sets include observations from 25 weather stations, and also latitude and longitude coordinates for each weather station. Now includes energy generation data for Ireland and Northern Ireland (2017), including Wind Generation data.
Author: Jim Duggan [aut, cre] (<https://orcid.org/0000-0002-7507-8617>)
Maintainer: Jim Duggan <jim.duggan@nuigalway.ie>

Diff between aimsir17 versions 0.0.1 dated 2019-12-02 and 0.0.2 dated 2020-08-14

 DESCRIPTION        |   15 +++++++++------
 MD5                |   10 +++++++---
 NEWS.md            |    4 ++++
 R/eirgrid17.R      |only
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 data/eirgrid17.rda |only
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 8 files changed, 31 insertions(+), 13 deletions(-)

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Package themis updated to version 0.1.2 with previous version 0.1.1 dated 2020-05-17

Title: Extra Recipes Steps for Dealing with Unbalanced Data
Description: A dataset with an uneven number of cases in each class is said to be unbalanced. Many models produce a subpar performance on unbalanced datasets. A dataset can be balanced by increasing the number of minority cases using SMOTE 2011 <arXiv:1106.1813>, BorderlineSMOTE 2005 <doi:10.1007/11538059_91> and ADASYN 2008 <https://ieeexplore.ieee.org/document/4633969>. Or by decreasing the number of majority cases using NearMiss 2003 <https://www.site.uottawa.ca/~nat/Workshop2003/jzhang.pdf> or Tomek link removal 1976 <https://ieeexplore.ieee.org/document/4309452>.
Author: Emil Hvitfeldt [aut, cre] (<https://orcid.org/0000-0002-0679-1945>)
Maintainer: Emil Hvitfeldt <emilhhvitfeldt@gmail.com>

Diff between themis versions 0.1.1 dated 2020-05-17 and 0.1.2 dated 2020-08-14

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 themis-0.1.1/themis/tests/testthat/test-dials.R            |only
 themis-0.1.2/themis/DESCRIPTION                            |   15 +-
 themis-0.1.2/themis/MD5                                    |   70 +++++-----
 themis-0.1.2/themis/NAMESPACE                              |    2 
 themis-0.1.2/themis/NEWS.md                                |    6 
 themis-0.1.2/themis/R/0_imports.R                          |   83 +------------
 themis-0.1.2/themis/R/adasyn.R                             |   35 ++---
 themis-0.1.2/themis/R/bsmote.R                             |   32 ++---
 themis-0.1.2/themis/R/downsample.R                         |    1 
 themis-0.1.2/themis/R/misc.R                               |   23 +++
 themis-0.1.2/themis/R/nearmiss.R                           |   14 --
 themis-0.1.2/themis/R/rose.R                               |   44 ++++--
 themis-0.1.2/themis/R/smote.R                              |   33 ++---
 themis-0.1.2/themis/R/smote_impl.R                         |   10 +
 themis-0.1.2/themis/R/tomek.R                              |   20 ---
 themis-0.1.2/themis/R/upsample.R                           |    1 
 themis-0.1.2/themis/R/zzz.R                                |only
 themis-0.1.2/themis/README.md                              |   24 +++
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 themis-0.1.2/themis/man/step_bsmote.Rd                     |    4 
 themis-0.1.2/themis/man/step_downsample.Rd                 |    4 
 themis-0.1.2/themis/man/step_nearmiss.Rd                   |    4 
 themis-0.1.2/themis/man/step_rose.Rd                       |    4 
 themis-0.1.2/themis/man/step_smote.Rd                      |    4 
 themis-0.1.2/themis/man/step_tomek.Rd                      |    4 
 themis-0.1.2/themis/man/step_upsample.Rd                   |    4 
 themis-0.1.2/themis/man/themis-package.Rd                  |    1 
 themis-0.1.2/themis/tests/testthat/helper-test-functions.R |   72 +++++++++++
 themis-0.1.2/themis/tests/testthat/test-adasyn.R           |    3 
 themis-0.1.2/themis/tests/testthat/test-bsmote.R           |    5 
 themis-0.1.2/themis/tests/testthat/test-downsample.R       |    1 
 themis-0.1.2/themis/tests/testthat/test-nearmiss.R         |    1 
 themis-0.1.2/themis/tests/testthat/test-rose.R             |    2 
 themis-0.1.2/themis/tests/testthat/test-smote.R            |    3 
 themis-0.1.2/themis/tests/testthat/test-tomek.R            |    1 
 themis-0.1.2/themis/tests/testthat/test-upsample.R         |    4 
 38 files changed, 307 insertions(+), 231 deletions(-)

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Package rmdcev updated to version 1.2.0 with previous version 1.1.1 dated 2019-11-22

Title: Kuhn-Tucker and Multiple Discrete-Continuous Extreme Value Models
Description: Estimates and simulates Kuhn-Tucker demand models with individual heterogeneity. The package implements the multiple-discrete continuous extreme value (MDCEV) model and the Kuhn-Tucker specification common in the environmental economics literature on recreation demand. Latent class and random parameters specifications can be implemented and the models are fit using maximum likelihood estimation or Bayesian estimation. All models are implemented in Stan, which is a C++ package for performing full Bayesian inference (see Stan Development Team, 2019) <http://mc-stan.org>. The package also implements demand forecasting (Pinjari and Bhat (2011) <https://repositories.lib.utexas.edu/handle/2152/23880>) and welfare calculation (Lloyd-Smith (2018) <doi.org/10.1016/j.jocm.2017.12.002>) for policy simulation.
Author: Patrick Lloyd-Smith [aut, cre], Trustees of Columbia University [cph]
Maintainer: Patrick Lloyd-Smith <patrick.lloydsmith@usask.ca>

Diff between rmdcev versions 1.1.1 dated 2019-11-22 and 1.2.0 dated 2020-08-14

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Package oxcovid19 updated to version 0.1.1 with previous version 0.1.0 dated 2020-07-16

Title: An R API to the Oxford COVID-19 Database
Description: The OxCOVID19 Project <https://covid19.eng.ox.ac.uk> aims to increase our understanding of the COVID-19 pandemic and elaborate possible strategies to reduce the impact on the society through the combined power of statistical, mathematical modelling, and machine learning techniques. The OxCOVID19 Database is a large, single-centre, multimodal relational database consisting of information (using acknowledged sources) related to COVID-19 pandemic. This package provides an R-specific interface to the OxCOVID19 Database based on widely-used data handling and manipulation approaches in R.
Author: Ernest Guevarra [aut, cre] (<https://orcid.org/0000-0002-4887-4415>), Chris Mercado [aut] (<https://orcid.org/0000-0002-5588-9543>), Robert Medina [aut] (<https://orcid.org/0000-0001-6647-5453>), Alexander Zarebski [aut]
Maintainer: Ernest Guevarra <ernest@guevarra.io>

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Package walker updated to version 0.4.1-3 with previous version 0.4.0 dated 2020-05-15

Title: Bayesian Generalized Linear Models with Time-Varying Coefficients
Description: Bayesian generalized linear models with time-varying coefficients. Gaussian, Poisson, and binomial observations are supported. The Markov chain Monte Carlo computations are done using Hamiltonian Monte Carlo provided by Stan, using a state space representation of the model in order to marginalise over the coefficients for efficient sampling. For non-Gaussian models, the package uses the importance sampling type estimators based on approximate marginal MCMC as in Vihola, Helske, Franks (2020, <arXiv:1609.02541>).
Author: Jouni Helske [aut, cre] (<https://orcid.org/0000-0001-7130-793X>)
Maintainer: Jouni Helske <jouni.helske@iki.fi>

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Package vroom updated to version 1.3.0 with previous version 1.2.1 dated 2020-05-12

Title: Read and Write Rectangular Text Data Quickly
Description: The goal of 'vroom' is to read and write data (like 'csv', 'tsv' and 'fwf') quickly. When reading it uses a quick initial indexing step, then reads the values lazily , so only the data you actually use needs to be read. The writer formats the data in parallel and writes to disk asynchronously from formatting.
Author: Jim Hester [aut, cre] (<https://orcid.org/0000-0002-2739-7082>), Hadley Wickham [aut] (<https://orcid.org/0000-0003-4757-117X>), https://github.com/mandreyel/ [cph] (mio library), R Core Team [ctb] (localtime.c code adapted from R), Jukka Jylänki [cph] (grisu3 implementation), Mikkel Jørgensen [cph] (grisu3 implementation), RStudio [cph, fnd]
Maintainer: Jim Hester <james.f.hester@gmail.com>

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Permanent link

Package MonetDB.R updated to version 2.0.0 with previous version 1.0.1 dated 2016-03-21

Title: Connect MonetDB to R
Description: Allows to pull data from MonetDB into R.
Author: Mitchell Weggemans [aut, cre], Hannes Muehleisen [aut], Anthony Damico [aut], Thomas Lumley [ctb]
Maintainer: Mitchell Weggemans <mitchell.weggemans@monetdbsolutions.com>

Diff between MonetDB.R versions 1.0.1 dated 2016-03-21 and 2.0.0 dated 2020-08-14

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Package ezplot updated to version 0.6.2 with previous version 0.6.1 dated 2020-06-13

Title: Functions for Common Chart Types
Description: Wrapper for the 'ggplot2' package that creates a variety of common charts (e.g. bar, line, area, ROC, waterfall, pie) while aiming to reduce typing.
Author: Wojtek Kostelecki
Maintainer: Wojtek Kostelecki <wojtek.kostelecki@gmail.com>

Diff between ezplot versions 0.6.1 dated 2020-06-13 and 0.6.2 dated 2020-08-14

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Package DAISIE updated to version 3.0.0 with previous version 1.4 dated 2017-04-13

Title: Dynamical Assembly of Islands by Speciation, Immigration and Extinction
Description: Simulates and computes the (maximum) likelihood of a dynamical model of island biota assembly through speciation, immigration and extinction. See e.g. Valente et al. 2015. Ecology Letters 18: 844-852, <DOI:10.1111/ele.12461>.
Author: Rampal S. Etienne [aut, cre] (<https://orcid.org/0000-0003-2142-7612>), Luis Valente [aut] (<https://orcid.org/0000-0003-4247-8785>), Albert B. Phillimore [aut] (<https://orcid.org/0000-0002-6553-1553>), Bart Haegeman [aut] (<https://orcid.org/0000-0003-2325-4727>), Joshua Lambert [aut], Pedro Neves [aut] (<https://orcid.org/0000-0003-2561-4677>), Shu Xie [aut], Richèl J.C. Bilderbeek [aut] (<https://orcid.org/0000-0003-1107-7049>), Torsten Hauffe [ctb] (<https://orcid.org/0000-0001-5711-9457>), Giovanni Laudanno [ctb], Nadiah Kristensen [ctb], Raphael Scherrer [ctb]
Maintainer: Rampal S. Etienne <r.s.etienne@rug.nl>

Diff between DAISIE versions 1.4 dated 2017-04-13 and 3.0.0 dated 2020-08-14

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Package rhymer updated to version 1.1.0 with previous version 1.0.0 dated 2017-12-19

Title: Wrapper for the 'Datamuse' API to Find Rhyming and Associated Words
Description: Wrapper for 'Datamuse' API to find rhyming and other associated words. This includes words of similar meaning, spelling, or other related words. Learn more about the 'Datamuse' API here <https://www.datamuse.com/api/>.
Author: Noah Landesberg [aut, cre]
Maintainer: Noah Landesberg <noah.landesberg@gmail.com>

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Package PeakSegDisk updated to version 2020.8.13 with previous version 2019.9.27 dated 2019-11-18

Title: Disk-Based Constrained Change-Point Detection
Description: Disk-based implementation of Functional Pruning Optimal Partitioning with up-down constraints <arXiv:1810.00117> for single-sample peak calling (independently for each sample and genomic problem), can handle huge data sets (10^7 or more).
Author: Toby Dylan Hocking
Maintainer: Toby Dylan Hocking <toby.hocking@r-project.org>

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2018-05-11 0.1.0

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2020-07-27 1.0.0

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