Title: Estimate Natural Mortality for Different Life Stages
Description: Estimate natural mortality (M) throughout the life history for organisms, mainly fish and invertebrates, based on gnomonic interval approach proposed by Caddy (1996) <doi:10.1051/alr:1996023> and Martinez-Aguilar et al. (2005) <doi:10.1016/j.fishres.2004.04.008>.
It includes estimation of duration of each gnomonic interval (life stage), the constant probability of death (G), and some basic plots.
Author: Josymar Torrejon-Magallanes [cre, aut]
Maintainer: Josymar Torrejon-Magallanes <ejosymart@gmail.com>
Diff between gnomonicM versions 1.0.0 dated 2020-11-09 and 1.0.1 dated 2021-02-16
DESCRIPTION | 10 MD5 | 26 +- NAMESPACE | 2 NEWS.md | 8 R/gnomonic-main.R | 11 R/gnomonicStochastic.R | 4 README.md | 12 - inst/doc/gnomonicM.R | 34 ++ inst/doc/gnomonicM.Rmd | 69 +++-- inst/doc/gnomonicM.html | 535 +++++++++++++++++++++++++--------------------- man/gnomonic.Rd | 11 man/gnomonicM-package.Rd | 6 man/gnomonicStochastic.Rd | 4 vignettes/gnomonicM.Rmd | 69 +++-- 14 files changed, 470 insertions(+), 331 deletions(-)
Title: Characterising and Locating Ecotones and Communities
Description: Analytical methods to locate and characterise ecotones, ecosystems and environmental patchiness along ecological gradients. Methods are implemented for isolated sampling or for space/time series. It includes Detrended Correspondence Analysis (Hill & Gauch (1980) <doi:10.1007/BF00048870>), fuzzy clustering (De Cáceres et al. (2010) <doi:10.1080/01621459.1963.10500845>), biodiversity indices (Jost (2006) <doi:10.1111/j.2006.0030-1299.14714.x>), and network analyses (Epskamp et al. (2012) <doi:10.18637/jss.v048.i04>) - as well as tools to explore the number of clusters in the data. Functions to produce synthetic ecological datasets are also provided.
Author: Antoine Bagnaro
Maintainer: Antoine Bagnaro <antoine.bagnaro@wanadoo.fr>
Diff between EcotoneFinder versions 0.2.2 dated 2020-11-23 and 0.2.3 dated 2021-02-16
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- R/Spinglass.R | 6 +++--- 3 files changed, 9 insertions(+), 9 deletions(-)
Title: Tools for Statistical Disclosure Control in Research Data
Centers
Description: Tools for researchers to explicitly show that their
results comply to rules for statistical disclosure control imposed by
research data centers. These tools help in checking descriptive
statistics and models and in calculating extreme values that are not
individual data. Also included is a simple function to create log
files. The methods used here are described in the "Guidelines for the
checking of output based on microdata research" by Bond, Brandt, and
de Wolf (2015)
<https://ec.europa.eu/eurostat/cros/system/files/dwb_standalone-document_output-checking-guidelines.pdf>.
Author: Matthias Gomolka [aut, cre],
Tim Becker [aut]
Maintainer: Matthias Gomolka <matthias.gomolka@posteo.de>
Diff between sdcLog versions 0.1.0 dated 2020-11-20 and 0.2.0 dated 2021-02-16
sdcLog-0.1.0/sdcLog/R/utils.R |only sdcLog-0.1.0/sdcLog/data/sdc_DT.rda |only sdcLog-0.1.0/sdcLog/data/sdc_extreme_DT.rda |only sdcLog-0.1.0/sdcLog/inst/doc/sdcLog.R |only sdcLog-0.1.0/sdcLog/inst/doc/sdcLog.Rmd |only sdcLog-0.1.0/sdcLog/inst/doc/sdcLog.html |only sdcLog-0.1.0/sdcLog/man/generate_log.Rd |only sdcLog-0.1.0/sdcLog/man/sdc_DT.Rd |only sdcLog-0.1.0/sdcLog/man/sdc_extreme.Rd |only sdcLog-0.1.0/sdcLog/man/sdc_extreme_DT.Rd |only sdcLog-0.1.0/sdcLog/tests/testthat/sdc_log.R |only sdcLog-0.1.0/sdcLog/tests/testthat/sdc_log.txt |only sdcLog-0.1.0/sdcLog/vignettes/sdcLog.Rmd |only sdcLog-0.2.0/sdcLog/DESCRIPTION | 10 sdcLog-0.2.0/sdcLog/MD5 | 111 - sdcLog-0.2.0/sdcLog/NAMESPACE | 9 sdcLog-0.2.0/sdcLog/NEWS.md | 30 sdcLog-0.2.0/sdcLog/R/arguments.R | 23 sdcLog-0.2.0/sdcLog/R/check_distinct_ids.R | 26 sdcLog-0.2.0/sdcLog/R/check_dominance.R | 40 sdcLog-0.2.0/sdcLog/R/datasets.R | 23 sdcLog-0.2.0/sdcLog/R/is_dummy.R | 12 sdcLog-0.2.0/sdcLog/R/print_methods.R | 45 sdcLog-0.2.0/sdcLog/R/sdc_descriptives.R | 97 - sdcLog-0.2.0/sdcLog/R/sdc_extreme.R | 168 +- sdcLog-0.2.0/sdcLog/R/sdc_log.R | 153 +- sdcLog-0.2.0/sdcLog/R/sdc_model.R | 212 +-- sdcLog-0.2.0/sdcLog/R/status_messages.R | 6 sdcLog-0.2.0/sdcLog/R/warn_distinct_ids.R |only sdcLog-0.2.0/sdcLog/README.md | 16 sdcLog-0.2.0/sdcLog/build/vignette.rds |binary sdcLog-0.2.0/sdcLog/data/sdc_descriptives_DT.rda |binary sdcLog-0.2.0/sdcLog/data/sdc_min_max_DT.rda |only sdcLog-0.2.0/sdcLog/data/sdc_model_DT.rda |binary sdcLog-0.2.0/sdcLog/inst/doc/FAQ.R | 3 sdcLog-0.2.0/sdcLog/inst/doc/FAQ.Rmd | 27 sdcLog-0.2.0/sdcLog/inst/doc/FAQ.html | 335 +--- sdcLog-0.2.0/sdcLog/inst/doc/intro.R |only sdcLog-0.2.0/sdcLog/inst/doc/intro.Rmd |only sdcLog-0.2.0/sdcLog/inst/doc/intro.html |only sdcLog-0.2.0/sdcLog/inst/doc/options.R | 6 sdcLog-0.2.0/sdcLog/inst/doc/options.Rmd | 45 sdcLog-0.2.0/sdcLog/inst/doc/options.html | 424 +----- sdcLog-0.2.0/sdcLog/man/check_distinct_ids.Rd | 6 sdcLog-0.2.0/sdcLog/man/check_dominance.Rd | 6 sdcLog-0.2.0/sdcLog/man/common_arguments.Rd | 20 sdcLog-0.2.0/sdcLog/man/sdc_descriptives.Rd | 14 sdcLog-0.2.0/sdcLog/man/sdc_log.Rd | 22 sdcLog-0.2.0/sdcLog/man/sdc_min_max.Rd |only sdcLog-0.2.0/sdcLog/man/sdc_min_max_DT.Rd |only sdcLog-0.2.0/sdcLog/man/sdc_model.Rd | 11 sdcLog-0.2.0/sdcLog/man/warn_distinct_ids.Rd |only sdcLog-0.2.0/sdcLog/tests/nobs_ |only sdcLog-0.2.0/sdcLog/tests/spelling.R | 8 sdcLog-0.2.0/sdcLog/tests/testthat/script_1.R |only sdcLog-0.2.0/sdcLog/tests/testthat/script_2.R |only sdcLog-0.2.0/sdcLog/tests/testthat/script_error.R |only sdcLog-0.2.0/sdcLog/tests/testthat/script_main.R |only sdcLog-0.2.0/sdcLog/tests/testthat/test-is_dummy.R | 14 sdcLog-0.2.0/sdcLog/tests/testthat/test-print_methods.R | 895 +++++-------- sdcLog-0.2.0/sdcLog/tests/testthat/test-sdc_descriptives.R | 420 ++---- sdcLog-0.2.0/sdcLog/tests/testthat/test-sdc_extreme.R | 495 ++----- sdcLog-0.2.0/sdcLog/tests/testthat/test-sdc_log.R | 167 +- sdcLog-0.2.0/sdcLog/tests/testthat/test-sdc_model.R | 440 +++--- sdcLog-0.2.0/sdcLog/tests/testthat/test_log.txt |only sdcLog-0.2.0/sdcLog/vignettes/FAQ.Rmd | 27 sdcLog-0.2.0/sdcLog/vignettes/intro.Rmd |only sdcLog-0.2.0/sdcLog/vignettes/options.Rmd | 45 68 files changed, 2066 insertions(+), 2345 deletions(-)
Title: Integrated Stratigraphy
Description: Includes bases for litholog generation: graphical functions
based on R base graphics, interval management functions and svg importation
functions among others. Also include stereographic projection functions,
and other functions made to deal with large datasets while keeping options
to get into the details of the data.
When using for publication please cite Wouters, S., Da Silva, A.C. Crucifix,
M., Sinnesael, M., Zivanovic, M., Boulvain, F., Devleeschouwer, X., 2019,
Litholog generation with the StratigrapheR package and signal decomposition
for cyclostratigraphic purposes. Geophysical Research Abstracts Vol. 21,
EGU2019-5520, 2019, EGU General Assembly 2019.
<http://hdl.handle.net/2268/234402>
The palaeomagnetism functions are based on:
Tauxe, L., 2010. Essentials of Paleomagnetism. University of California
Press. <https://earthref.org/MagIC/books/Tauxe/Essentials/>;
Allmendinger, R. W., Cardozo, N. C., and Fisher, D., 2013, Structural
Geology Algorithms: Vectors & Tensors: Cambridge, England, Cambridge
University Press, 289 pp.;
Cardozo, N., and Allmendinger, R. W., 2013, Spherical projections
with OSXStereonet: Computers & Geosciences, v. 51, no. 0, p. 193 - 205,
<doi: 10.1016/j.cageo.2012.07.021>.
Author: Sebastien Wouters [aut, cre], Adam D. Smith [ctb]
Maintainer: Sebastien Wouters <sebastien.wouters@doct.uliege.be>
Diff between StratigrapheR versions 1.1.2 dated 2021-01-04 and 1.2.0 dated 2021-02-16
DESCRIPTION | 6 - MD5 | 21 ++- NAMESPACE | 1 NEWS | 10 + R/StratigrapheR.R | 2 R/in.window.R |only R/multigons.R | 230 ++++++++++++++++++++++++++---------------- R/multilines.R | 39 ++----- R/supporting.examples.R | 8 + data/example.HB2000.svg.rda |only man/StratigrapheR.Rd | 2 man/StratigrapheR.examples.Rd | 5 man/in.window.Rd |only 13 files changed, 197 insertions(+), 127 deletions(-)
Title: Summary Tables and Plots for Statistical Models and Data:
Beautiful, Customizable, and Publication-Ready
Description: Create beautiful and customizable tables to summarize several
statistical models side-by-side. Draw coefficient plots, multi-level
cross-tabs, dataset summaries, balance tables (a.k.a. "Table 1s"), and
correlation matrices. This package supports dozens of statistical models,
and it can produce tables in HTML, LaTeX, Word, Markdown, PDF, PowerPoint,
Excel, RTF, JPG, or PNG. Tables can easily be embedded in 'Rmarkdown' or
'knitr' dynamic documents.
Author: Vincent Arel-Bundock [aut, cre]
(<https://orcid.org/0000-0003-2042-7063>)
Maintainer: Vincent Arel-Bundock <vincent.arel-bundock@umontreal.ca>
Diff between modelsummary versions 0.6.5 dated 2021-01-07 and 0.6.6 dated 2021-02-16
DESCRIPTION | 11 ++-- MD5 | 100 +++++++++++++++++++------------------- NAMESPACE | 1 NEWS.md | 12 ++++ R/bind.R | 25 +++++++++ R/coef_rename.R |only R/datasummary_functions.R | 46 ++++++++--------- R/extract_estimates.R | 50 +++++++++++++++---- R/factory_kableExtra.R | 20 ++++++- R/modelplot.R | 36 +++++++++++++ R/modelsummary.R | 19 ++++--- R/parse_output_arg.R | 29 +++++------ R/reexport.R | 2 R/sanity_checks.R | 27 ++++++---- build/modelsummary.pdf |binary inst |only man/All.Rd | 2 man/Histogram.Rd | 2 man/Max.Rd | 6 +- man/Mean.Rd | 6 +- man/Median.Rd | 6 +- man/Min.Rd | 6 +- man/N.Rd | 2 man/NPercent.Rd | 2 man/NUnique.Rd | 2 man/Ncol.Rd | 2 man/P0.Rd | 6 +- man/P100.Rd | 6 +- man/P25.Rd | 6 +- man/P50.Rd | 6 +- man/P75.Rd | 6 +- man/PercentMissing.Rd | 2 man/SD.Rd | 6 +- man/Var.Rd | 6 +- man/coef_rename.Rd |only man/datasummary.Rd | 2 man/datasummary_balance.Rd | 10 ++- man/datasummary_correlation.Rd | 2 man/datasummary_df.Rd | 10 ++- man/datasummary_skim.Rd | 10 ++- man/get_estimates.Rd | 8 +-- man/get_gof.Rd | 8 +-- man/modelplot.Rd | 26 ++++++++- man/modelsummary.Rd | 12 ++-- man/modelsummary_wide.Rd | 12 ++-- man/msummary.Rd | 12 ++-- tests/spelling.R |only tests/testthat/test-custom.R | 50 ++++++++++++++++++- tests/testthat/test-datasummary.R | 2 tests/testthat/test-gt.R | 1 tests/testthat/test-huxtable.R | 2 tests/testthat/test-latex.R | 8 +++ tests/testthat/test-statistic.R | 9 +++ 53 files changed, 442 insertions(+), 200 deletions(-)
Title: Read Subtitle Files as Tabular Data
Description: Read 'SubRip'
<https://sourceforge.net/projects/subrip/> subtitle files as data
frames for easy text analysis or manipulation. Easily shift numeric
timings and export subtitles back into valid 'SubRip' timestamp format
to sync subtitles and audio.
Author: Kiernan Nicholls [aut, cre]
Maintainer: Kiernan Nicholls <kiernann@protonmail.com>
Diff between srt versions 1.0.0 dated 2020-11-30 and 1.0.2 dated 2021-02-16
srt-1.0.0/srt/inst/extdata/community-pilot.en.srt |only srt-1.0.0/srt/inst/extdata/toy-story.en.srt |only srt-1.0.2/srt/DESCRIPTION | 19 ++- srt-1.0.2/srt/MD5 | 41 ++++---- srt-1.0.2/srt/NEWS.md | 5 + srt-1.0.2/srt/R/example.R | 21 +--- srt-1.0.2/srt/R/parse.R | 2 srt-1.0.2/srt/R/read.R | 4 srt-1.0.2/srt/R/shift.R | 2 srt-1.0.2/srt/R/utils.R | 10 ++ srt-1.0.2/srt/R/write.R | 3 srt-1.0.2/srt/README.md | 97 +++++++++----------- srt-1.0.2/srt/inst/WORDLIST |only srt-1.0.2/srt/inst/extdata/Its-a-Wonderful-Life.srt |only srt-1.0.2/srt/man/read_srt.Rd | 2 srt-1.0.2/srt/man/srt_example.Rd | 12 +- srt-1.0.2/srt/man/srt_seconds.Rd | 2 srt-1.0.2/srt/man/srt_shift.Rd | 2 srt-1.0.2/srt/man/write_srt.Rd | 2 srt-1.0.2/srt/tests/spelling.R |only srt-1.0.2/srt/tests/testthat/test-example.R | 16 --- srt-1.0.2/srt/tests/testthat/test-read.R | 16 --- srt-1.0.2/srt/tests/testthat/test-shift.R | 3 srt-1.0.2/srt/tests/testthat/test-write.R | 13 +- 24 files changed, 132 insertions(+), 140 deletions(-)
Title: Download, Compile and Link 'OpenBLAS' Library with R
Description: The 'ropenblas' package (<https://prdm0.github.io/ropenblas/>) is useful for users of any 'GNU/Linux' distribution. It will be possible to download, compile and link the 'OpenBLAS' library (<https://www.openblas.net/>) with the R language, always by the same procedure, regardless of the 'GNU/Linux' distribution used. With the 'ropenblas' package it is possible to download, compile and link the latest version of the 'OpenBLAS' library even the repositories of the 'GNU/Linux' distribution used do not include the latest versions of 'OpenBLAS'. If of interest, older versions of the 'OpenBLAS' library may be considered. Linking R with an optimized version of 'BLAS' (<http://www.netlib.org/blas/>) may improve the computational performance of R code. The 'OpenBLAS' library is an optimized implementation of 'BLAS' that can be easily linked to R with the 'ropenblas' package.
Author: Pedro Rafael D. Marinho [aut, cre]
Maintainer: Pedro Rafael D. Marinho <pedro.rafael.marinho@gmail.com>
Diff between ropenblas versions 0.2.8 dated 2020-09-19 and 0.2.9 dated 2021-02-16
ropenblas-0.2.8/ropenblas/README.md |only ropenblas-0.2.9/ropenblas/DESCRIPTION | 6 +++--- ropenblas-0.2.9/ropenblas/MD5 | 7 +++---- ropenblas-0.2.9/ropenblas/NEWS.md | 8 +++++++- ropenblas-0.2.9/ropenblas/R/ropenblas.R | 22 ++++++++++++++++------ 5 files changed, 29 insertions(+), 14 deletions(-)
Title: Mixed GAM Computation Vehicle with Automatic Smoothness
Estimation
Description: Generalized additive (mixed) models, some of their extensions and
other generalized ridge regression with multiple smoothing
parameter estimation by (Restricted) Marginal Likelihood,
Generalized Cross Validation and similar, or using iterated
nested Laplace approximation for fully Bayesian inference. See
Wood (2017) <doi:10.1201/9781315370279> for an overview.
Includes a gam() function, a wide variety of smoothers, 'JAGS'
support and distributions beyond the exponential family.
Author: Simon Wood <simon.wood@r-project.org>
Maintainer: Simon Wood <simon.wood@r-project.org>
Diff between mgcv versions 1.8-33 dated 2020-08-27 and 1.8-34 dated 2021-02-16
ChangeLog | 27 +++++++ DESCRIPTION | 8 +- MD5 | 85 ++++++++++++----------- R/bam.r | 31 +++++--- R/efam.r | 6 - R/gam.fit3.r | 2 R/gamlss.r | 13 ++- R/mcmc.r | 4 - R/mgcv.r | 13 +-- R/misc.r | 46 ++++++++---- R/plots.r | 8 +- R/smooth.r | 47 +++++++++---- build |only man/Tweedie.Rd | 2 man/XWXd.Rd | 8 +- man/bam.Rd | 4 - man/coxph.Rd | 2 man/family.mgcv.Rd | 2 man/gam.Rd | 8 +- man/gam.convergence.Rd | 2 man/gam.mh.Rd | 4 - man/gammals.Rd | 2 man/gaulss.Rd | 2 man/gevlss.Rd | 4 - man/gumbls.Rd | 2 man/logLik.gam.Rd | 2 man/mgcv-package.Rd | 2 man/multinom.Rd | 2 man/mvn.Rd | 2 man/negbin.Rd | 2 man/ocat.Rd | 2 man/predict.bam.Rd | 13 ++- man/scat.Rd | 2 man/shash.Rd | 2 man/smooth.construct.gp.smooth.spec.Rd | 14 +++ man/smooth.construct.sos.smooth.spec.Rd | 5 - man/sp.vcov.Rd | 2 man/twlss.Rd | 2 man/ziP.Rd | 2 man/ziplss.Rd | 2 src/discrete.c | 18 ++--- src/gdi.c | 21 ----- src/mgcv.h | 1 src/sparse.c | 114 ++++++++++++++++++++++---------- 44 files changed, 330 insertions(+), 212 deletions(-)
Title: Basic Functions to Check Readability, Consistency, and Content
of an Individual Participant Data File
Description: Basic checks needed with an individual level participant data from randomised controlled trial. This
checks files for existence, read access and individual columns for formats. The checks on format is currently implemented for gender and age formats.
Author: Sheeja Manchira Krishnan
Maintainer: Sheeja Manchira Krishnan <sheejamk@gmail.com>
Diff between IPDFileCheck versions 0.6.4 dated 2020-11-20 and 0.6.5 dated 2021-02-16
IPDFileCheck-0.6.4/IPDFileCheck/man/descriptive_stats_col.Rd |only IPDFileCheck-0.6.4/IPDFileCheck/man/represent_categorical_data.Rd |only IPDFileCheck-0.6.5/IPDFileCheck/DESCRIPTION | 8 IPDFileCheck-0.6.5/IPDFileCheck/MD5 | 28 IPDFileCheck-0.6.5/IPDFileCheck/NAMESPACE | 11 IPDFileCheck-0.6.5/IPDFileCheck/R/IPDFilecheck.R | 331 ++++++++- IPDFileCheck-0.6.5/IPDFileCheck/inst/doc/User_Guide.R | 22 IPDFileCheck-0.6.5/IPDFileCheck/inst/doc/User_Guide.Rmd | 356 +++++----- IPDFileCheck-0.6.5/IPDFileCheck/inst/doc/User_Guide.html | 94 +- IPDFileCheck-0.6.5/IPDFileCheck/man/descriptive_stats_col_excl_nrcode.Rd |only IPDFileCheck-0.6.5/IPDFileCheck/man/get_value_from_codes.Rd |only IPDFileCheck-0.6.5/IPDFileCheck/man/keep_required_columns.Rd |only IPDFileCheck-0.6.5/IPDFileCheck/man/represent_categorical_data_exclude_missing.Rd |only IPDFileCheck-0.6.5/IPDFileCheck/man/represent_categorical_data_forsubgroups.Rd |only IPDFileCheck-0.6.5/IPDFileCheck/man/represent_categorical_data_include_missing.Rd |only IPDFileCheck-0.6.5/IPDFileCheck/man/represent_numerical_data_forsubgroups.Rd |only IPDFileCheck-0.6.5/IPDFileCheck/man/return_subgroup_omitna.Rd | 11 IPDFileCheck-0.6.5/IPDFileCheck/man/return_subgroup_withNA.Rd |only IPDFileCheck-0.6.5/IPDFileCheck/tests/testthat/test-IPDFilecheck.R | 231 ++++-- IPDFileCheck-0.6.5/IPDFileCheck/vignettes/User_Guide.Rmd | 356 +++++----- 20 files changed, 934 insertions(+), 514 deletions(-)
Title: Access London Natural History Museum Host-Helminth Record
Database
Description: Access to large host-parasite data is often hampered by the
availability of data and difficulty in obtaining it in a programmatic way
to encourage analyses. 'helminthR' provides a programmatic interface to the
London Natural History Museum's host-parasite database, one of the largest
host-parasite databases existing currently <https://www.nhm.ac.uk/research-curation/scientific-resources/taxonomy-systematics/host-parasites/>. The package allows the user
to query by host species, parasite species, and geographic location.
Author: Tad Dallas
Maintainer: Tad Dallas <tad.a.dallas@gmail.com>
Diff between helminthR versions 1.0.7 dated 2019-02-03 and 1.0.8 dated 2021-02-16
DESCRIPTION | 19 MD5 | 36 NAMESPACE | 2 NEWS.md | 6 R/cleanData.R | 63 - R/findLocation.R | 7 R/helminthR-package.R | 3 README.md | 8 build/vignette.rds |binary inst/doc/helminthR_vignette.R | 22 inst/doc/helminthR_vignette.Rmd | 4 inst/doc/helminthR_vignette.html | 1814 ++++++++++++++++++++++++++++++++----- man/findHost.Rd | 16 man/findLocation.Rd | 17 man/findParasite.Rd | 16 man/locations.Rd | 6 tests/testthat/test-findHost.R | 2 tests/testthat/test-findLocation.R | 2 vignettes/helminthR_vignette.Rmd | 4 19 files changed, 1713 insertions(+), 334 deletions(-)
Title: Selecting Attributes
Description: Functions for selecting attributes from a given
dataset. Attribute subset selection is the process of identifying and
removing as much of the irrelevant and redundant information as
possible.
Author: Piotr Romanski, Lars Kotthoff, Patrick Schratz
Maintainer: Lars Kotthoff <larsko@uwyo.edu>
Diff between FSelector versions 0.32 dated 2021-01-07 and 0.33 dated 2021-02-16
DESCRIPTION | 24 ++++++++++++++---------- MD5 | 4 ++-- R/discretize.R | 14 +++++++------- 3 files changed, 23 insertions(+), 19 deletions(-)
Title: Exploratory Graph Analysis - A Framework for Estimating the
Number of Dimensions in Multivariate Data Using Network
Psychometrics
Description: Implements the Exploratory Graph Analysis (EGA) framework for dimensionality and psychometric assessment. EGA is part of a new area called network psychometrics that uses undirected network models for the assessment of psychometric properties. EGA estimates the number of dimensions (or factors) using graphical lasso or Triangulated Maximally Filtered Graph (TMFG) and a weighted network community detection algorithm. A bootstrap method for verifying the stability of the dimensions and items in those dimensions is available. The fit of the structure suggested by EGA can be verified using Entropy Fit Indices. A novel approach called Unique Variable Analysis (UVA) can be used to identify and reduce redundant variables in multivariate data. Network loadings, which are roughly equivalent to factor loadings when the data generating model is a factor model, are available. Network scores can also be computed using the network loadings. Dynamic EGA (dynEGA) will estimate dimensions from time series data for individual, group, and sample levels. Golino, H., & Epskamp, S. (2017) <doi:10.1371/journal.pone.0174035>. Golino, H., Shi, D., Christensen, A. P., Garrido, L. E., Nieto, M. D., Sadana, R., & Thiyagarajan, J. A. (2020) <doi:10.1037/met0000255>. Christensen, A. P., & Golino, H. (under review) <doi:10.31234/osf.io/hz89e>. Golino, H., Moulder, R. G., Shi, D., Christensen, A. P., Garrido, L. E., Nieto, M. D., Nesselroade, J., Sadana, R., Thiyagarajan, J. A., & Boker, S. M. (2020) <doi:10.31234/osf.io/mtka2>. Christensen, A. P. & Golino, H. (2019) <doi:10.31234/osf.io/9deay>. Christensen, A. P., Garrido, L. E., & Golino, H. (under review) <doi:10.31234/osf.io/4kra2>. Golino, H., Christensen, A. P., Moulder, R. G., Kim, S., & Boker, S. M. (under review) <doi:10.31234/osf.io/tfs7c>.
Author: Hudson Golino [aut, cre] (<https://orcid.org/0000-0002-1601-1447>),
Alexander Christensen [aut] (<https://orcid.org/0000-0002-9798-7037>),
Robert Moulder [ctb] (<https://orcid.org/0000-0001-7504-9560>),
Luis E. Garrido [ctb] (<https://orcid.org/0000-0001-8932-6063>)
Maintainer: Hudson Golino <hfg9s@virginia.edu>
Diff between EGAnet versions 0.9.6 dated 2020-07-13 and 0.9.8 dated 2021-02-16
EGAnet-0.9.6/EGAnet/R/cmi.R |only EGAnet-0.9.6/EGAnet/R/dynamic.plot.R |only EGAnet-0.9.6/EGAnet/data/datalist |only EGAnet-0.9.6/EGAnet/data/depression.RData |only EGAnet-0.9.6/EGAnet/data/intelligenceBattery.RData |only EGAnet-0.9.6/EGAnet/data/wmt2.RData |only EGAnet-0.9.6/EGAnet/inst/doc/Redundant_Nodes.R |only EGAnet-0.9.6/EGAnet/inst/doc/Redundant_Nodes.Rmd |only EGAnet-0.9.6/EGAnet/inst/doc/Redundant_Nodes.html |only EGAnet-0.9.6/EGAnet/man/cmi.Rd |only EGAnet-0.9.6/EGAnet/man/dynamic.plot.Rd |only EGAnet-0.9.6/EGAnet/vignettes/Figure_SI1_Code.png |only EGAnet-0.9.6/EGAnet/vignettes/Figure_SI2_NR.png |only EGAnet-0.9.6/EGAnet/vignettes/Redundant_Nodes.Rmd |only EGAnet-0.9.8/EGAnet/DESCRIPTION | 33 EGAnet-0.9.8/EGAnet/MD5 | 196 EGAnet-0.9.8/EGAnet/NAMESPACE | 24 EGAnet-0.9.8/EGAnet/NEWS | 50 EGAnet-0.9.8/EGAnet/R/CFA.R | 33 EGAnet-0.9.8/EGAnet/R/EBICglasso.qgraph.R | 12 EGAnet-0.9.8/EGAnet/R/EGA.R | 818 + EGAnet-0.9.8/EGAnet/R/EGA.estimate.R | 685 - 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EGAnet-0.9.8/EGAnet/R/node.redundant.names.R | 14 EGAnet-0.9.8/EGAnet/R/optimism.R | 1 EGAnet-0.9.8/EGAnet/R/plots.R | 681 + EGAnet-0.9.8/EGAnet/R/shinyEGA.R |only EGAnet-0.9.8/EGAnet/R/tefi.R | 54 EGAnet-0.9.8/EGAnet/R/totalCor.R |only EGAnet-0.9.8/EGAnet/R/totalCorMat.R |only EGAnet-0.9.8/EGAnet/R/utils-EGAnet.R | 4574 +++++++--- EGAnet-0.9.8/EGAnet/R/utils-EGAnet.methods.section.R |only EGAnet-0.9.8/EGAnet/R/vn.entropy.R | 25 EGAnet-0.9.8/EGAnet/R/zzz.R | 33 EGAnet-0.9.8/EGAnet/build/partial.rdb |only EGAnet-0.9.8/EGAnet/build/vignette.rds |binary EGAnet-0.9.8/EGAnet/data/boot.wmt.RData |binary EGAnet-0.9.8/EGAnet/data/dnn.weights.RData |binary EGAnet-0.9.8/EGAnet/data/ega.wmt.RData |binary EGAnet-0.9.8/EGAnet/inst/CITATION | 32 EGAnet-0.9.8/EGAnet/inst/Shiny |only EGAnet-0.9.8/EGAnet/inst/doc/Network_Scores.R | 22 EGAnet-0.9.8/EGAnet/inst/doc/Network_Scores.Rmd | 113 EGAnet-0.9.8/EGAnet/inst/doc/Network_Scores.html | 197 EGAnet-0.9.8/EGAnet/inst/doc/Unique_Variable_Analysis.R |only 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EGAnet-0.9.8/EGAnet/vignettes/Figures |only EGAnet-0.9.8/EGAnet/vignettes/Network_Scores.Rmd | 113 EGAnet-0.9.8/EGAnet/vignettes/Unique_Variable_Analysis.Rmd |only EGAnet-0.9.8/EGAnet/vignettes/apa.csl |only EGAnet-0.9.8/EGAnet/vignettes/merged.items.csv |only 117 files changed, 9322 insertions(+), 4060 deletions(-)
Title: Inference and Prediction in an Illness-Death Model
Description: Newly developed methods for the estimation of several probabilities
in an illness-death model. The package can be used to obtain nonparametric and
semiparametric estimates for: transition probabilities, occupation probabilities,
cumulative incidence function and the sojourn time distributions.
Additionally, it is possible to fit proportional hazards regression models
in each transition of the Illness-Death Model. Several auxiliary
functions are also provided which can be used for marginal
estimation of the survival functions.
Author: Luis Meira-Machado, Marta Sestelo and Gustavo Soutinho
Maintainer: Marta Sestelo <sestelo@uvigo.es>
Diff between survidm versions 1.2.0 dated 2019-01-07 and 1.3.0 dated 2021-02-16
DESCRIPTION | 13 ++-- MD5 | 34 ++++++----- NAMESPACE | 45 +++++++++------ R/Beran.R | 3 - R/autoplot.survIDM.R |only R/coxidm.R | 10 +++ R/nevents.R | 40 +------------ R/survIDM.R | 16 ++++- R/tprob.R | 126 ++++++++++++++++++++++-------------------- build/partial.rdb |binary man/CIF.Rd | 18 +++++- man/autoplot.survIDM.Rd |only man/coxidm.Rd | 3 - man/markov.test.Rd | 5 - man/nevents.Rd | 40 ++++++++----- man/plot.survIDM.Rd | 4 - man/sojourn.Rd | 18 +++++- man/survIDM.Rd | 14 ++++ man/tprob.Rd | 143 +++++++++++++++++++++++++++--------------------- 19 files changed, 305 insertions(+), 227 deletions(-)
Title: Interactive Graphics Functions for the 'spatstat' Package
Description: Extension to the 'spatstat' package, containing
interactive graphics capabilities.
Author: Adrian Baddeley [aut, cre] (<https://orcid.org/0000-0001-9499-8382>),
Rolf Turner [aut] (<https://orcid.org/0000-0001-5521-5218>),
Ege Rubak [aut] (<https://orcid.org/0000-0002-6675-533X>)
Maintainer: Adrian Baddeley <Adrian.Baddeley@curtin.edu.au>
Diff between spatstat.gui versions 1.0-2 dated 2020-03-19 and 1.2-0 dated 2021-02-16
DESCRIPTION | 15 ++++++++------- MD5 | 7 ++++--- NAMESPACE | 3 ++- NEWS |only man/istat.Rd | 10 +++++----- 5 files changed, 19 insertions(+), 16 deletions(-)
Title: Kernel Operations on GPU or CPU, with Autodiff, without Memory
Overflows
Description: The 'KeOps' library lets you compute generic reductions of very
large arrays whose entries are given by a mathematical formula with CPU and
GPU computing support. It combines a tiled reduction scheme with an
automatic differentiation engine. It is perfectly suited to the efficient
computation of Kernel dot products and the associated gradients, even when
the full kernel matrix does not fit into the GPU memory.
Author: Benjamin Charlier [aut] (<http://imag.umontpellier.fr/~charlier/>),
Jean Feydy [aut] (<https://www.math.ens.fr/~feydy/>),
Joan A. Glaunès [aut] (<https://www.mi.parisdescartes.fr/~glaunes/>),
Ghislain Durif [aut, cre] (<https://gdurif.perso.math.cnrs.fr/>),
François-David Collin [ctb] (Development-related consulting and
support),
Daniel Frey [ctb] (Author of the included C++ library 'sequences')
Maintainer: Ghislain Durif <gd.dev@libertymail.net>
Diff between rkeops versions 1.4.1.1 dated 2020-09-04 and 1.4.2 dated 2021-02-16
rkeops-1.4.1.1/rkeops/inst/include/keops/lib/sequences/include/tao/seq/index_of_seq.hpp |only rkeops-1.4.1.1/rkeops/inst/include/keops/lib/sequences/include/tao/seq/permutate.hpp |only rkeops-1.4.1.1/rkeops/inst/include/keops/lib/sequences/include/tao/seq/sort_index.hpp |only rkeops-1.4.1.1/rkeops/inst/include/keops/lib/sequences/src/test/seq/index_of_seq.cpp |only rkeops-1.4.1.1/rkeops/inst/include/keops/lib/sequences/src/test/seq/permutate.cpp |only rkeops-1.4.1.1/rkeops/inst/include/keops/lib/sequences/src/test/seq/sort_index.cpp |only rkeops-1.4.2/rkeops/DESCRIPTION | 27 rkeops-1.4.2/rkeops/MD5 | 233 +- rkeops-1.4.2/rkeops/NAMESPACE | 4 rkeops-1.4.2/rkeops/R/common-get_cmake.R | 36 rkeops-1.4.2/rkeops/R/generic-keops_kernel.R | 43 rkeops-1.4.2/rkeops/R/rkeops-package.R | 2 rkeops-1.4.2/rkeops/R/utils.R | 54 rkeops-1.4.2/rkeops/R/zzz.R | 7 rkeops-1.4.2/rkeops/README.md | 75 rkeops-1.4.2/rkeops/build/vignette.rds |binary rkeops-1.4.2/rkeops/inst/CMakeLists.txt | 26 rkeops-1.4.2/rkeops/inst/doc/introduction_to_rkeops.Rmd | 12 rkeops-1.4.2/rkeops/inst/doc/introduction_to_rkeops.html | 12 rkeops-1.4.2/rkeops/inst/doc/using_rkeops.R | 12 rkeops-1.4.2/rkeops/inst/doc/using_rkeops.Rmd | 20 rkeops-1.4.2/rkeops/inst/doc/using_rkeops.html | 26 rkeops-1.4.2/rkeops/inst/include/binder/src/generic_red.cpp | 4 rkeops-1.4.2/rkeops/inst/include/binder/src/generic_red.h | 2 rkeops-1.4.2/rkeops/inst/include/binder/src/keops_io.h | 4 rkeops-1.4.2/rkeops/inst/include/binder/src/r_genred.cpp | 8 rkeops-1.4.2/rkeops/inst/include/keops/binders/checks.h | 108 - rkeops-1.4.2/rkeops/inst/include/keops/binders/include.h | 6 rkeops-1.4.2/rkeops/inst/include/keops/binders/keops_cst.h | 59 rkeops-1.4.2/rkeops/inst/include/keops/binders/switch.h | 52 rkeops-1.4.2/rkeops/inst/include/keops/binders/utils.h | 2 rkeops-1.4.2/rkeops/inst/include/keops/core/autodiff/BinaryOp.h | 132 - rkeops-1.4.2/rkeops/inst/include/keops/core/autodiff/ChunkableBinaryOp.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/autodiff/ChunkableUnaryOp.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/autodiff/TernaryOp.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/autodiff/UnaryOp.h | 45 rkeops-1.4.2/rkeops/inst/include/keops/core/autodiff/Var.h | 56 rkeops-1.4.2/rkeops/inst/include/keops/core/autodiff/VectorizedScalarBinaryOp.h | 22 rkeops-1.4.2/rkeops/inst/include/keops/core/autodiff/VectorizedScalarTernaryOp.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/autodiff/VectorizedScalarUnaryOp.h | 33 rkeops-1.4.2/rkeops/inst/include/keops/core/binder_interface.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/Factorize.h | 7 rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/constants/IntConst.h | 24 rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/constants/Zero.h | 24 rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/kernels/GaussKernel.h | 17 rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/kernels/Kernel.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/Acos.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/Add.h | 19 rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/Asin.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/Atan.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/Clamp.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/ClampInt.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/DiffClampInt.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/Exp.h | 3 rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/Mult.h | 18 rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/Readme.md | 7 rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/Scal.h | 12 rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/Subtract.h | 30 rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/Sum.h | 33 rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/SumT.h | 20 rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/TensorDot.h | 115 - rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/maths/TensorDotNoTao.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/norms/Scalprod.h | 15 rkeops-1.4.2/rkeops/inst/include/keops/core/formulas/norms/WeightedSqNorm.h | 29 rkeops-1.4.2/rkeops/inst/include/keops/core/link_autodiff.cpp | 1 rkeops-1.4.2/rkeops/inst/include/keops/core/link_autodiff.cu | 3 rkeops-1.4.2/rkeops/inst/include/keops/core/mapreduce/Chunk_Mode_Constants.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/mapreduce/CpuConv.cpp | 81 rkeops-1.4.2/rkeops/inst/include/keops/core/mapreduce/CpuConv_ranges.cpp | 111 - rkeops-1.4.2/rkeops/inst/include/keops/core/mapreduce/GpuConv1D.cu | 770 ++++---- rkeops-1.4.2/rkeops/inst/include/keops/core/mapreduce/GpuConv1D_ranges.cu | 936 +++++++--- rkeops-1.4.2/rkeops/inst/include/keops/core/mapreduce/GpuConv2D.cu | 345 +-- rkeops-1.4.2/rkeops/inst/include/keops/core/pack/Call.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/pack/IndVal.h | 2 rkeops-1.4.2/rkeops/inst/include/keops/core/pack/Load.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/pack/Load_Chunks.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/pack/Load_Indref.h |only rkeops-1.4.2/rkeops/inst/include/keops/core/pack/Pack.h | 130 - rkeops-1.4.2/rkeops/inst/include/keops/core/pack/UnivPack.h | 26 rkeops-1.4.2/rkeops/inst/include/keops/core/pre_headers.h | 2 rkeops-1.4.2/rkeops/inst/include/keops/core/reductions/KMin_Reduction.h | 6 rkeops-1.4.2/rkeops/inst/include/keops/core/reductions/Max_Reduction.h | 20 rkeops-1.4.2/rkeops/inst/include/keops/core/reductions/Max_SumShiftExp_Reduction.h | 2 rkeops-1.4.2/rkeops/inst/include/keops/core/reductions/Min_Reduction.h | 20 rkeops-1.4.2/rkeops/inst/include/keops/core/reductions/Reduction.h | 22 rkeops-1.4.2/rkeops/inst/include/keops/core/reductions/Sum_Reduction.h | 10 rkeops-1.4.2/rkeops/inst/include/keops/core/utils/TypesUtils.h | 80 rkeops-1.4.2/rkeops/inst/include/keops/core/utils/keops_math.h | 29 rkeops-1.4.2/rkeops/inst/include/keops/cuda.cmake | 67 rkeops-1.4.2/rkeops/inst/include/keops/headers.cmake | 23 rkeops-1.4.2/rkeops/inst/include/keops/keops_includes.h | 64 rkeops-1.4.2/rkeops/inst/include/keops/lib/sequences/CMakeLists.txt | 2 rkeops-1.4.2/rkeops/inst/include/keops/lib/sequences/README.md | 45 rkeops-1.4.2/rkeops/inst/include/keops/lib/sequences/include/tao/seq/at_index.hpp | 35 rkeops-1.4.2/rkeops/inst/include/keops/lib/sequences/include/tao/seq/config.hpp | 6 rkeops-1.4.2/rkeops/inst/include/keops/lib/sequences/include/tao/seq/contrib |only rkeops-1.4.2/rkeops/inst/include/keops/lib/sequences/include/tao/seq/exclusive_scan.hpp | 4 rkeops-1.4.2/rkeops/inst/include/keops/lib/sequences/include/tao/seq/functional.hpp | 4 rkeops-1.4.2/rkeops/inst/include/keops/lib/sequences/include/tao/seq/integer_sequence.hpp | 2 rkeops-1.4.2/rkeops/inst/include/keops/lib/sequences/include/tao/seq/sum.hpp | 2 rkeops-1.4.2/rkeops/inst/include/keops/lib/sequences/src/test/seq/CMakeLists.txt | 6 rkeops-1.4.2/rkeops/inst/include/keops/lib/sequences/src/test/seq/contrib_index_of_seq.cpp |only rkeops-1.4.2/rkeops/inst/include/keops/lib/sequences/src/test/seq/contrib_permutate.cpp |only rkeops-1.4.2/rkeops/inst/include/keops/lib/sequences/src/test/seq/contrib_sort_index.cpp |only rkeops-1.4.2/rkeops/man/check_compile_options.Rd | 2 rkeops-1.4.2/rkeops/man/check_runtime_options.Rd | 2 rkeops-1.4.2/rkeops/man/clean_rkeops.Rd | 2 rkeops-1.4.2/rkeops/man/compile4cpu.Rd | 2 rkeops-1.4.2/rkeops/man/compile4float32.Rd | 2 rkeops-1.4.2/rkeops/man/compile4float64.Rd | 2 rkeops-1.4.2/rkeops/man/compile4gpu.Rd | 4 rkeops-1.4.2/rkeops/man/compile_code.Rd | 6 rkeops-1.4.2/rkeops/man/compile_formula.Rd | 6 rkeops-1.4.2/rkeops/man/compile_options.Rd | 16 rkeops-1.4.2/rkeops/man/default_compile_options.Rd | 20 rkeops-1.4.2/rkeops/man/default_runtime_options.Rd | 14 rkeops-1.4.2/rkeops/man/get_os.Rd |only rkeops-1.4.2/rkeops/man/get_rkeops_option.Rd | 18 rkeops-1.4.2/rkeops/man/get_rkeops_options.Rd | 22 rkeops-1.4.2/rkeops/man/is_compiled.Rd | 6 rkeops-1.4.2/rkeops/man/is_installed.Rd | 4 rkeops-1.4.2/rkeops/man/keops_grad.Rd | 4 rkeops-1.4.2/rkeops/man/keops_kernel.Rd | 4 rkeops-1.4.2/rkeops/man/rkeops_option_names.Rd | 8 rkeops-1.4.2/rkeops/man/runtime_options.Rd | 10 rkeops-1.4.2/rkeops/man/set_rkeops_option.Rd | 12 rkeops-1.4.2/rkeops/man/set_rkeops_options.Rd | 28 rkeops-1.4.2/rkeops/man/use_cpu.Rd | 21 rkeops-1.4.2/rkeops/man/use_gpu.Rd | 8 rkeops-1.4.2/rkeops/vignettes/introduction_to_rkeops.Rmd | 12 rkeops-1.4.2/rkeops/vignettes/using_rkeops.Rmd | 20 131 files changed, 2717 insertions(+), 1889 deletions(-)
Title: Lightweight Infrastructure for Handling Multiple R Markdown
Documents
Description: Provides an infrastructure for handling multiple R Markdown
reports, including automated curation and time-stamping of outputs,
parameterisation and provision of helper functions to manage dependencies.
Author: Thibaut Jombart [aut],
Amy Gimma [ctb],
Tim Taylor [aut, cre] (<https://orcid.org/0000-0002-8587-7113>)
Maintainer: Tim Taylor <tim.taylor@hiddenelephants.co.uk>
Diff between reportfactory versions 0.1.2 dated 2021-01-24 and 0.1.3 dated 2021-02-16
DESCRIPTION | 6 - MD5 | 15 ++-- NEWS.md | 10 ++- R/compile_reports.R | 6 + R/validate_factory.R | 19 ++--- tests/testthat/_snaps/compile_reports/outputs_deleted_param_report_check.md |only tests/testthat/test-compile_reports.R | 33 ++++++++++ tests/testthat/test-new_factory.R | 30 ++++----- tests/testthat/test-validate_factory.R | 4 - 9 files changed, 82 insertions(+), 41 deletions(-)
Title: Test for a Neutral Evolutionary Model in Cancer Sequencing Data
Description: Package takes frequencies of mutations as reported by high throughput sequencing data from cancer and fits a theoretical neutral model of tumour evolution. Package outputs summary statistics and contains code for plotting the data and model fits. See Williams et al 2016 <doi:10.1038/ng.3489> and Williams et al 2017 <doi:10.1101/096305> for further details of the method.
Author: Marc Williams [aut, cre]
Maintainer: Marc Williams <marcjwilliams1@gmail.com>
Diff between neutralitytestr versions 0.0.2 dated 2018-05-21 and 0.0.3 dated 2021-02-16
DESCRIPTION | 8 - MD5 | 24 +-- NEWS.md | 3 R/methods.R | 6 R/plots.R | 2 README.md | 7 build/vignette.rds |binary inst/doc/neutraltytestr.R | 10 - inst/doc/neutraltytestr.html | 338 ++++++++++++++++++++++++++++++++++++++----- man/VAFneutral.Rd | 4 man/VAFselection.Rd | 4 man/neutralitytest.Rd | 12 + man/neutralitytestr.Rd | 1 13 files changed, 356 insertions(+), 63 deletions(-)
More information about neutralitytestr at CRAN
Permanent link
Title: Estimation of Life Years Lost
Description: Estimation of life expectancy and
Life Years Lost (LYL, or lillies for short) for a given population, for
example those with a given disease or condition. In addition, the package
can be used to compare estimates from different populations, or to estimate
confidence intervals. Technical details of the method are available in
Plana-Ripoll et al. (2020) <doi:10.1371/journal.pone.0228073> and Andersen
(2017) <doi:10.1002/sim.7357>.
Author: Oleguer Plana-Ripoll [aut, cre]
(<https://orcid.org/0000-0002-6470-7465>)
Maintainer: Oleguer Plana-Ripoll <opr@econ.au.dk>
Diff between lillies versions 0.2.8 dated 2020-11-03 and 0.2.9 dated 2021-02-16
DESCRIPTION | 6 - MD5 | 15 ++- NAMESPACE | 1 R/lyl_diff.R | 1 R/lyl_plot.R | 189 +++++++++++++++++++++++++++++++++++------------- man/lyl_2plot.Rd | 14 +-- man/lyl_compare_plot.Rd |only man/lyl_diff.Rd | 1 man/plot.lyl.Rd | 4 - 9 files changed, 160 insertions(+), 71 deletions(-)
Title: Estimating and Testing the Number of Interesting Components in
Linear Dimension Reduction
Description: For different linear dimension reduction methods like principal components analysis (PCA), independent components analysis (ICA) and supervised linear dimension reduction tests and estimates for the number of interesting components (ICs) are provided.
Author: Klaus Nordhausen [aut, cre] (<https://orcid.org/0000-0002-3758-8501>),
Hannu Oja [aut] (<https://orcid.org/0000-0002-4945-5976>),
David E. Tyler [aut],
Joni Virta [aut] (<https://orcid.org/0000-0002-2150-2769>)
Maintainer: Klaus Nordhausen <klaus.k.nordhausen@jyu.fi>
Diff between ICtest versions 0.3-2 dated 2019-08-23 and 0.3-3 dated 2021-02-16
DESCRIPTION | 34 +++++++++++++++++++++++++++------- MD5 | 20 ++++++++++---------- R/NGPP.R | 2 +- build/vignette.rds |binary inst/ChangeLog | 6 ++++++ inst/doc/ICA.R | 18 +++++++++--------- inst/doc/ICA.html | 6 +++--- inst/doc/PCA.R | 8 ++++---- inst/doc/PCA.html | 2 +- inst/doc/SIR.R | 6 +++--- man/PCAboot.Rd | 8 +++++--- 11 files changed, 69 insertions(+), 41 deletions(-)
Title: Graph Signal Processing
Description: Provides the standard operations for signal processing on graphs:
graph Fourier transform, spectral graph wavelet transform,
visualization tools. It also implements a data driven method
for graph signal denoising/regression, for details see
De Loynes, Navarro, Olivier (2019) <arxiv:1906.01882>.
The package also provides an interface to the SuiteSparse Matrix Collection,
<https://sparse.tamu.edu/>, a large and widely used set of sparse matrix
benchmarks collected from a wide range of applications.
Author: Fabien Navarro [aut, cre],
Basile De Loynes [aut],
Baptiste Olivier [aut]
Maintainer: Fabien Navarro <fabien.navarro@math.cnrs.fr>
Diff between gasper versions 1.1.0 dated 2021-02-09 and 1.1.1 dated 2021-02-16
DESCRIPTION | 6 +- MD5 | 38 +++++++++-------- NAMESPACE | 1 NEWS.md | 22 +++++++--- R/HPFVN.R | 4 - R/PSNR.R |only R/SNR.R | 4 - R/download_graph.R | 26 +++++------ R/fullup.R | 4 - R/laplacian_mat.R | 2 R/randsignal.R | 6 +- inst/CITATION | 18 ++++++-- inst/doc/gasper_vignette.R | 76 ++++++++++++++++++++++++---------- inst/doc/gasper_vignette.pdf |binary inst/doc/gasper_vignette.rmd | 92 ++++++++++++++++++++++++++++++------------ man/HPFVN.Rd | 4 - man/PSNR.Rd |only man/download_graph.Rd | 10 ++-- man/fullup.Rd | 4 - man/randsignal.Rd | 6 +- vignettes/gasper_vignette.rmd | 92 ++++++++++++++++++++++++++++++------------ 21 files changed, 276 insertions(+), 139 deletions(-)
Title: The Complete R6 Probability Distributions Interface
Description: An R6 object oriented distributions package. Unified interface for 42 probability distributions and 11 kernels including functionality for multiple scientific types. Additionally functionality for composite distributions and numerical imputation. Design patterns including wrappers and decorators are described in Gamma et al. (1994, ISBN:0-201-63361-2). For quick reference of probability distributions including d/p/q/r functions and results we refer to McLaughlin, M. P. (2001). Additionally Devroye (1986, ISBN:0-387-96305-7) for sampling the Dirichlet distribution, Gentle (2009) <doi:10.1007/978-0-387-98144-4> for sampling the Multivariate Normal distribution and Michael et al. (1976) <doi:10.2307/2683801> for sampling the Wald distribution.
Author: Raphael Sonabend [aut, cre] (<https://orcid.org/0000-0001-9225-4654>),
Franz Kiraly [aut],
Peter Ruckdeschel [ctb] (Author of distr),
Matthias Kohl [ctb] (Author of distr),
Nurul Ain Toha [ctb],
Shen Chen [ctb],
Jordan Deenichin [ctb],
Chengyang Gao [ctb],
Chloe Zhaoyuan Gu [ctb],
Yunjie He [ctb],
Xiaowen Huang [ctb],
Shuhan Liu [ctb],
Runlong Yu [ctb],
Chijing Zeng [ctb],
Qian Zhou [ctb]
Maintainer: Raphael Sonabend <raphael.sonabend.15@ucl.ac.uk>
Diff between distr6 versions 1.4.8 dated 2020-12-12 and 1.5.0 dated 2021-02-16
distr6-1.4.8/distr6/tests/testthat/test_sdistribution_ributionValidations.R |only distr6-1.4.8/distr6/tests/testthat/test_sdistribution_ributions.R |only distr6-1.5.0/distr6/DESCRIPTION | 17 distr6-1.5.0/distr6/MD5 | 311 +-- distr6-1.5.0/distr6/NAMESPACE | 3 distr6-1.5.0/distr6/NEWS.md | 45 distr6-1.5.0/distr6/R/Distribution.R | 6 distr6-1.5.0/distr6/R/Distribution_SDistribution.R | 15 distr6-1.5.0/distr6/R/Kernel_Cosine.R | 20 distr6-1.5.0/distr6/R/Kernel_Epanechnikov.R | 20 distr6-1.5.0/distr6/R/Kernel_Logistic.R | 20 distr6-1.5.0/distr6/R/Kernel_Normal.R | 10 distr6-1.5.0/distr6/R/Kernel_Quartic.R | 20 distr6-1.5.0/distr6/R/Kernel_Sigmoid.R | 10 distr6-1.5.0/distr6/R/Kernel_Silverman.R | 20 distr6-1.5.0/distr6/R/Kernel_Triangular.R | 20 distr6-1.5.0/distr6/R/Kernel_Tricube.R | 20 distr6-1.5.0/distr6/R/Kernel_Triweight.R | 20 distr6-1.5.0/distr6/R/Kernel_Uniform.R | 20 distr6-1.5.0/distr6/R/ParameterSet.R | 129 + distr6-1.5.0/distr6/R/ParameterSetCollection.R | 37 distr6-1.5.0/distr6/R/SDistribution_Arcsine.R | 13 distr6-1.5.0/distr6/R/SDistribution_Bernoulli.R | 18 distr6-1.5.0/distr6/R/SDistribution_Beta.R | 15 distr6-1.5.0/distr6/R/SDistribution_BetaNoncentral.R | 15 distr6-1.5.0/distr6/R/SDistribution_Binomial.R | 22 distr6-1.5.0/distr6/R/SDistribution_Categorical.R | 22 distr6-1.5.0/distr6/R/SDistribution_Cauchy.R | 8 distr6-1.5.0/distr6/R/SDistribution_ChiSquared.R | 19 distr6-1.5.0/distr6/R/SDistribution_ChiSquaredNoncentral.R | 20 distr6-1.5.0/distr6/R/SDistribution_Degenerate.R | 14 distr6-1.5.0/distr6/R/SDistribution_Dirichlet.R | 27 distr6-1.5.0/distr6/R/SDistribution_DiscreteUniform.R | 16 distr6-1.5.0/distr6/R/SDistribution_Empirical.R | 7 distr6-1.5.0/distr6/R/SDistribution_EmpiricalMultivariate.R | 9 distr6-1.5.0/distr6/R/SDistribution_Erlang.R | 17 distr6-1.5.0/distr6/R/SDistribution_Exponential.R | 17 distr6-1.5.0/distr6/R/SDistribution_FDistribution.R | 19 distr6-1.5.0/distr6/R/SDistribution_FDistributionNoncentral.R | 19 distr6-1.5.0/distr6/R/SDistribution_Frechet.R | 14 distr6-1.5.0/distr6/R/SDistribution_Gamma.R | 22 distr6-1.5.0/distr6/R/SDistribution_Geometric.R | 32 distr6-1.5.0/distr6/R/SDistribution_Gompertz.R | 7 distr6-1.5.0/distr6/R/SDistribution_Gumbel.R | 8 distr6-1.5.0/distr6/R/SDistribution_Hypergeometric.R | 26 distr6-1.5.0/distr6/R/SDistribution_InverseGamma.R | 7 distr6-1.5.0/distr6/R/SDistribution_Laplace.R | 17 distr6-1.5.0/distr6/R/SDistribution_Logarithmic.R | 7 distr6-1.5.0/distr6/R/SDistribution_Logistic.R | 18 distr6-1.5.0/distr6/R/SDistribution_Loglogistic.R | 17 distr6-1.5.0/distr6/R/SDistribution_Lognormal.R | 47 distr6-1.5.0/distr6/R/SDistribution_Multinomial.R | 31 distr6-1.5.0/distr6/R/SDistribution_MultivariateNormal.R | 23 distr6-1.5.0/distr6/R/SDistribution_NegBinomal.R | 44 distr6-1.5.0/distr6/R/SDistribution_Normal.R | 22 distr6-1.5.0/distr6/R/SDistribution_Pareto.R | 13 distr6-1.5.0/distr6/R/SDistribution_Poisson.R | 7 distr6-1.5.0/distr6/R/SDistribution_Rayleigh.R | 7 distr6-1.5.0/distr6/R/SDistribution_ShiftedLoglogistic.R | 29 distr6-1.5.0/distr6/R/SDistribution_StudentT.R | 7 distr6-1.5.0/distr6/R/SDistribution_StudentTNoncentral.R | 7 distr6-1.5.0/distr6/R/SDistribution_Triangular.R | 38 distr6-1.5.0/distr6/R/SDistribution_Uniform.R | 13 distr6-1.5.0/distr6/R/SDistribution_Wald.R | 7 distr6-1.5.0/distr6/R/SDistribution_Weibull.R | 17 distr6-1.5.0/distr6/R/SDistribution_WeightedDiscrete.R | 43 distr6-1.5.0/distr6/R/Wrapper.R | 5 distr6-1.5.0/distr6/R/Wrapper_Convolution.R | 2 distr6-1.5.0/distr6/R/Wrapper_HuberizedDistribution.R | 24 distr6-1.5.0/distr6/R/Wrapper_MixtureDistribution.R | 14 distr6-1.5.0/distr6/R/Wrapper_ProductDistribution.R | 6 distr6-1.5.0/distr6/R/Wrapper_TruncatedDistribution.R | 24 distr6-1.5.0/distr6/R/Wrapper_VectorDistribution.R | 123 + distr6-1.5.0/distr6/R/getParameterSet.R | 248 -- distr6-1.5.0/distr6/R/helpers.R | 10 distr6-1.5.0/distr6/R/mixturiseVector.R | 2 distr6-1.5.0/distr6/R/sugar.R |only distr6-1.5.0/distr6/inst/doc/distr6.html | 861 ++++------ distr6-1.5.0/distr6/man/Arcsine.Rd | 35 distr6-1.5.0/distr6/man/Bernoulli.Rd | 35 distr6-1.5.0/distr6/man/Beta.Rd | 35 distr6-1.5.0/distr6/man/BetaNoncentral.Rd | 40 distr6-1.5.0/distr6/man/Binomial.Rd | 35 distr6-1.5.0/distr6/man/Categorical.Rd | 39 distr6-1.5.0/distr6/man/Cauchy.Rd | 24 distr6-1.5.0/distr6/man/ChiSquared.Rd | 35 distr6-1.5.0/distr6/man/ChiSquaredNoncentral.Rd | 35 distr6-1.5.0/distr6/man/Degenerate.Rd | 32 distr6-1.5.0/distr6/man/Dirichlet.Rd | 61 distr6-1.5.0/distr6/man/DiscreteUniform.Rd | 35 distr6-1.5.0/distr6/man/Distribution.Rd | 11 distr6-1.5.0/distr6/man/DistributionWrapper.Rd | 11 distr6-1.5.0/distr6/man/Empirical.Rd | 39 distr6-1.5.0/distr6/man/EmpiricalMV.Rd | 39 distr6-1.5.0/distr6/man/Erlang.Rd | 51 distr6-1.5.0/distr6/man/Exponential.Rd | 51 distr6-1.5.0/distr6/man/FDistribution.Rd | 35 distr6-1.5.0/distr6/man/FDistributionNoncentral.Rd | 40 distr6-1.5.0/distr6/man/Frechet.Rd | 32 distr6-1.5.0/distr6/man/Gamma.Rd | 57 distr6-1.5.0/distr6/man/Geometric.Rd | 55 distr6-1.5.0/distr6/man/Gompertz.Rd | 24 distr6-1.5.0/distr6/man/Gumbel.Rd | 24 distr6-1.5.0/distr6/man/HuberizedDistribution.Rd | 11 distr6-1.5.0/distr6/man/Hypergeometric.Rd | 39 distr6-1.5.0/distr6/man/InverseGamma.Rd | 24 distr6-1.5.0/distr6/man/Laplace.Rd | 51 distr6-1.5.0/distr6/man/Logarithmic.Rd | 24 distr6-1.5.0/distr6/man/Logistic.Rd | 51 distr6-1.5.0/distr6/man/Loglogistic.Rd | 48 distr6-1.5.0/distr6/man/Lognormal.Rd | 50 distr6-1.5.0/distr6/man/MixtureDistribution.Rd | 7 distr6-1.5.0/distr6/man/Multinomial.Rd | 57 distr6-1.5.0/distr6/man/MultivariateNormal.Rd | 34 distr6-1.5.0/distr6/man/NegativeBinomial.Rd | 43 distr6-1.5.0/distr6/man/Normal.Rd | 48 distr6-1.5.0/distr6/man/ParameterSet.Rd | 9 distr6-1.5.0/distr6/man/ParameterSetCollection.Rd | 35 distr6-1.5.0/distr6/man/Pareto.Rd | 39 distr6-1.5.0/distr6/man/Poisson.Rd | 24 distr6-1.5.0/distr6/man/ProductDistribution.Rd | 7 distr6-1.5.0/distr6/man/Rayleigh.Rd | 24 distr6-1.5.0/distr6/man/ShiftedLoglogistic.Rd | 39 distr6-1.5.0/distr6/man/StudentT.Rd | 24 distr6-1.5.0/distr6/man/StudentTNoncentral.Rd | 24 distr6-1.5.0/distr6/man/Triangular.Rd | 41 distr6-1.5.0/distr6/man/TruncatedDistribution.Rd | 11 distr6-1.5.0/distr6/man/Uniform.Rd | 35 distr6-1.5.0/distr6/man/VectorDistribution.Rd | 5 distr6-1.5.0/distr6/man/Wald.Rd | 22 distr6-1.5.0/distr6/man/Weibull.Rd | 51 distr6-1.5.0/distr6/man/WeightedDiscrete.Rd | 50 distr6-1.5.0/distr6/man/distr6-package.Rd | 1 distr6-1.5.0/distr6/man/dstr.Rd |only distr6-1.5.0/distr6/man/length.VectorDistribution.Rd |only distr6-1.5.0/distr6/man/setParameterValue.Rd | 6 distr6-1.5.0/distr6/man/sub-.ParameterSet.Rd | 14 distr6-1.5.0/distr6/man/sub-.VectorDistribution.Rd | 8 distr6-1.5.0/distr6/tests/testthat/Rplots.pdf |only distr6-1.5.0/distr6/tests/testthat/helpers.R | 11 distr6-1.5.0/distr6/tests/testthat/test_ParameterSet.R | 6 distr6-1.5.0/distr6/tests/testthat/test_ParameterSetCollection.R | 46 distr6-1.5.0/distr6/tests/testthat/test_checks.R |only distr6-1.5.0/distr6/tests/testthat/test_decorator_corestatistics.R | 2 distr6-1.5.0/distr6/tests/testthat/test_methods.R |only distr6-1.5.0/distr6/tests/testthat/test_repDistribution.R | 7 distr6-1.5.0/distr6/tests/testthat/test_sdistribution_Dirichlet.R | 2 distr6-1.5.0/distr6/tests/testthat/test_sdistribution_EmpiricalMV.R | 1 distr6-1.5.0/distr6/tests/testthat/test_sdistribution_Multinomial.R | 17 distr6-1.5.0/distr6/tests/testthat/test_sdistribution_MultivariateNormal.R | 13 distr6-1.5.0/distr6/tests/testthat/test_sdistribution_NegativeBinomial.R | 2 distr6-1.5.0/distr6/tests/testthat/test_sdistribution_Triangular.R | 2 distr6-1.5.0/distr6/tests/testthat/test_sdistribution_Weibull.R | 2 distr6-1.5.0/distr6/tests/testthat/test_sdistribution_WeightedDiscrete.R | 9 distr6-1.5.0/distr6/tests/testthat/test_sugar.R |only distr6-1.5.0/distr6/tests/testthat/test_wrapper.R | 18 distr6-1.5.0/distr6/tests/testthat/test_wrapper_huberize.R | 28 distr6-1.5.0/distr6/tests/testthat/test_wrapper_mixture.R | 9 distr6-1.5.0/distr6/tests/testthat/test_wrapper_product.R | 7 distr6-1.5.0/distr6/tests/testthat/test_wrapper_truncation.R | 20 distr6-1.5.0/distr6/tests/testthat/test_wrapper_vector.R | 83 161 files changed, 2859 insertions(+), 2201 deletions(-)
Title: Delaunay Triangulation and Dirichlet (Voronoi) Tessellation
Description: Calculates the Delaunay triangulation and the Dirichlet
or Voronoi tessellation (with respect to the entire plane) of
a planar point set. Plots triangulations and tessellations in
various ways. Clips tessellations to sub-windows. Calculates
perimeters of tessellations. Summarises information about
the tiles of the tessellation. Calculates the centroidal
Voronoi (Dirichlet) tessellation using Lloyd's algorithm.
Author: Rolf Turner
Maintainer: Rolf Turner <r.turner@auckland.ac.nz>
Diff between deldir versions 0.2-9 dated 2021-01-16 and 0.2-10 dated 2021-02-16
deldir-0.2-10/deldir/ChangeLog | 25 +++++++++++++++++++++++- deldir-0.2-10/deldir/DESCRIPTION | 13 ++++++------ deldir-0.2-10/deldir/MD5 | 29 ++++++++++++++++------------ deldir-0.2-10/deldir/NAMESPACE | 1 deldir-0.2-10/deldir/R/cvt.R |only deldir-0.2-10/deldir/R/deldir.R | 2 + deldir-0.2-10/deldir/R/tile.centroids.R | 12 ++++++++--- deldir-0.2-10/deldir/R/verGetter.R |only deldir-0.2-10/deldir/build |only deldir-0.2-10/deldir/data/volTriPoints.rda |only deldir-0.2-10/deldir/man/cvt.Rd |only deldir-0.2-10/deldir/man/deldir-internal.Rd | 2 + deldir-0.2-10/deldir/man/deldir.Rd | 10 +++++---- deldir-0.2-10/deldir/man/macros |only deldir-0.2-10/deldir/man/plot.deldir.Rd | 2 - deldir-0.2-10/deldir/man/plot.tile.list.Rd | 8 +++---- deldir-0.2-10/deldir/man/tile.centroids.Rd | 4 +-- deldir-0.2-10/deldir/man/volTriPoints.Rd |only deldir-0.2-9/deldir/data/Vol.Tri.Points.rda |only deldir-0.2-9/deldir/man/Vol.Tri.Points.Rd |only 20 files changed, 75 insertions(+), 33 deletions(-)
Title: Extracts the Backbone from Weighted Graphs
Description: Provides methods for extracting from a weighted graph
a binary or signed backbone that retains only the significant edges.
The user may input a weighted graph, or a bipartite graph
from which a weighted graph is first constructed via projection.
Backbone extraction methods include the stochastic degree sequence model (Neal, Z. P. (2014). <doi:10.1016/j.socnet.2014.06.001>),
hypergeometric model (Neal, Z. (2013). <doi:10.1007/s13278-013-0107-y>),
the fixed degree sequence model (Zweig, K. A., and Kaufmann, M. (2011). <doi:10.1007/s13278-011-0021-0>),
as well as a universal threshold method.
Author: Rachel Domagalski [aut, cre],
Zachary Neal [aut],
Bruce Sagan [aut]
Maintainer: Rachel Domagalski <domagal9@msu.edu>
Diff between backbone versions 1.3.0 dated 2021-02-02 and 1.3.1 dated 2021-02-16
DESCRIPTION | 6 +- MD5 | 35 +++++++------- NEWS.md | 7 ++ R/backbone.extract.R | 2 R/bicm.R | 79 +++++++++++---------------------- R/fdsm.R | 5 +- R/hyperg.R | 10 ++-- R/sdsm.R | 6 ++ R/universal.R | 5 +- README.md | 4 + build/partial.rdb |binary inst/doc/backbone.html | 26 +++++----- man/backbone.extract.Rd | 2 man/fdsm.Rd | 3 - man/hyperg.Rd | 3 - man/sdsm.Rd | 3 - man/universal.Rd | 5 +- tests/testthat/test-backbone.extract.R | 8 +-- tests/testthat/test-bipartite.null.R |only 19 files changed, 103 insertions(+), 106 deletions(-)
More information about AdvancedBasketballStats at CRAN
Permanent link
Title: Versatile Curation of Table Metadata
Description: A YAML-based
mechanism for working with table metadata. It supports
compact syntax for creating, modifying, viewing, exporting,
importing, displaying, and plotting metadata coded as column
attributes. The 'yamlet' dialect is valid 'YAML' with
defaults and conventions chosen to improve readability.
See ?yamlet, ?decorate.data.frame and ?modify.default.
See ?read_yamlet ?write_yamlet, ?io_csv, and ?ggplot.decorated.
Author: Tim Bergsma
Maintainer: Tim Bergsma <bergsmat@gmail.com>
Diff between yamlet versions 0.6.5 dated 2021-02-15 and 0.6.9 dated 2021-02-16
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- R/classified.R | 13 ++++++++++++- R/gather.R | 38 ++++++++++++++++++++++++++++---------- inst/doc/yamlet-introduction.html | 4 ++-- tests/testthat/test-yamlet.R | 32 ++++++++++++++++++++++++++++++++ 6 files changed, 82 insertions(+), 21 deletions(-)
Title: Partitioning Using Local Subregions
Description: A method of clustering functional data using
subregion information of the curves. It is intended to supplement the
'fda' and 'fda.usc' packages in functional data object clustering. It
also facilitates the printing and plotting of the results in a tree
format and limits the partitioning candidates into a specific set of
subregions.
Author: Mark Greenwood [aut] (<https://orcid.org/0000-0001-6933-1201>),
Tan Tran [aut, cre] (<https://orcid.org/0000-0001-9881-6339>)
Maintainer: Tan Tran <vinhtantran@gmail.com>
Diff between puls versions 0.1.1 dated 2020-12-09 and 0.1.2 dated 2021-02-16
DESCRIPTION | 6 +-- MD5 | 12 +++---- NEWS.md | 4 ++ R/as_monoclust.puls.R | 4 +- build/partial.rdb |binary inst/doc/puls.html | 51 +++++++++++++++++--------------- tests/testthat/test-as_monoclust.puls.R | 6 --- 7 files changed, 43 insertions(+), 40 deletions(-)
Title: Landscape and Range Expansion Simulation
Description: Tools to generate random landscape graphs, evaluate species
occurrence in dynamic landscapes, simulate future landscape occupation and
evaluate range expansion when new empty patches are available (e.g. as a
result of climate change). References: Mestre, F., Canovas, F., Pita, R.,
Mira, A., Beja, P. (2016) <doi:10.1016/j.envsoft.2016.03.007>; Mestre, F.,
Risk, B., Mira, A., Beja, P., Pita, R. (2017)
<doi:10.1016/j.ecolmodel.2017.06.013>; Mestre, F., Pita, R., Mira, A., Beja,
P. (2020) <doi:10.1186/s12898-019-0273-5>.
Author: Frederico Mestre, Fernando Canovas, Benjamin Risk, Ricardo Pita,
Antonio Mira, Pedro Beja.
Maintainer: Frederico Mestre <mestre.frederico@gmail.com>
Diff between MetaLandSim versions 1.0.7 dated 2020-06-02 and 1.0.8 dated 2021-02-16
DESCRIPTION | 18 +-- MD5 | 22 +-- NAMESPACE | 10 + R/import.shape.R | 5 build/vignette.rds |binary inst/doc/landscape_simulation-knitr.pdf |binary inst/doc/parameter_estimation-knitr.pdf |binary inst/doc/range_expansion-knitr.pdf |binary man/MetaLandSim-package.Rd | 131 +++++++++++------------ man/import.shape.Rd | 122 +++++++++++---------- man/range_expansion.Rd | 147 +++++++++++++------------ man/range_raster.Rd | 182 ++++++++++++++++---------------- 12 files changed, 329 insertions(+), 308 deletions(-)
Title: Build and Tune Several Models
Description: Frequently one needs a convenient way to build and tune
several models in one go.The goal is to provide a number of machine learning convenience
functions. It provides the ability to build, tune and obtain predictions of
several models in one function. The models are built using 'caret' functions with
easier to read syntax.
Kuhn(2014) <arXiv:1405.6974>.
Author: Nelson Gonzabato [aut, cre]
Maintainer: Nelson Gonzabato <gonzabato@hotmail.com>
Diff between manymodelr versions 0.3.2 dated 2020-06-27 and 0.3.5 dated 2021-02-16
DESCRIPTION | 8 - MD5 | 49 +++--- NAMESPACE | 3 NEWS.md | 3 R/fit_model.R | 47 ++++-- R/get_var_corr.R | 4 R/helpers.R | 17 ++ R/zzz.R | 16 +- build/vignette.rds |binary inst/doc/manymodelr_vignette.R | 67 +++++++-- inst/doc/manymodelr_vignette.html | 260 ++++++++++++++++++++++++++----------- inst/doc/manymodelr_vignette.rmd | 135 +++++++++++++------ man/add_model_predictions.Rd | 64 ++++----- man/add_model_residuals.Rd | 50 +++---- man/drop_non_numeric.Rd |only man/fit_model.Rd | 18 ++ man/fit_models.Rd | 19 ++ man/get_mode.Rd | 72 +++++----- man/get_var_corr_.Rd | 84 +++++------ man/multi_model_2.Rd | 3 man/na_replace_grouped.Rd | 52 +++---- man/select_col.Rd | 64 ++++----- man/select_percentile.Rd | 60 ++++---- tests/testthat/test_fit_model.R | 2 tests/testthat/test_get_var_corr.R | 4 vignettes/manymodelr_vignette.rmd | 135 +++++++++++++------ 26 files changed, 783 insertions(+), 453 deletions(-)
More information about marginalizedRisk at CRAN
Permanent link
Title: Analyze Clustered Data with Generalized Linear Models using the
Cluster Bootstrap
Description: Provides functionality for the analysis of clustered data using the cluster bootstrap.
Author: Mathijs Deen [aut, cre],
Mark de Rooij [aut]
Maintainer: Mathijs Deen <m.l.deen@fsw.leidenuniv.nl>
Diff between ClusterBootstrap versions 1.1.0 dated 2020-02-24 and 1.1.2 dated 2021-02-16
ClusterBootstrap-1.1.0/ClusterBootstrap/README.md |only ClusterBootstrap-1.1.2/ClusterBootstrap/DESCRIPTION | 10 +++--- ClusterBootstrap-1.1.2/ClusterBootstrap/MD5 | 17 +++++------ ClusterBootstrap-1.1.2/ClusterBootstrap/NAMESPACE | 1 ClusterBootstrap-1.1.2/ClusterBootstrap/NEWS | 8 +++++ ClusterBootstrap-1.1.2/ClusterBootstrap/R/clusbootglm.R | 5 ++- ClusterBootstrap-1.1.2/ClusterBootstrap/inst/CITATION | 19 +++++++------ ClusterBootstrap-1.1.2/ClusterBootstrap/man/clusbootglm.Rd | 2 - ClusterBootstrap-1.1.2/ClusterBootstrap/man/medication.Rd | 6 ++-- ClusterBootstrap-1.1.2/ClusterBootstrap/man/opposites.Rd | 6 ++-- 10 files changed, 45 insertions(+), 29 deletions(-)
More information about ClusterBootstrap at CRAN
Permanent link
Title: Data on Base Packages for Current and Previous Versions of R
Description: Provides a dataset of functions in all base packages of R versions 1.0.1 onwards.
Author: David Hugh-Jones [aut, cre]
Maintainer: David Hugh-Jones <davidhughjones@gmail.com>
Diff between rcheology versions 4.0.3.0 dated 2020-10-31 and 4.0.4.0 dated 2021-02-16
DESCRIPTION | 8 +++--- MD5 | 14 +++++------ NEWS.md | 6 ++++ README.md | 38 ++++++++++++++----------------- data/Rversions.rda |binary data/rcheology.rda |binary man/figures/README-unnamed-chunk-5-1.png |binary man/figures/README-unnamed-chunk-6-1.png |binary 8 files changed, 35 insertions(+), 31 deletions(-)
More information about fwildclusterboot at CRAN
Permanent link
Title: Robust Bayesian Meta-Analyses
Description: A framework for estimating ensembles of meta-analytic models
(assuming either presence or absence of the effect, heterogeneity, and
publication bias) and using Bayesian model averaging to combine them. The
ensembles use Bayes factors to test for the presence or absence of the
individual components (e.g., effect vs. no effect) and model-averages
parameter estimates based on posterior model probabilities
(Maier, Bartoš & Wagenmakers, 2020, <doi:10.31234/osf.io/u4cns>). The user can
define a wide range of non-informative or informative priors for the
effect size, heterogeneity, and weight functions. The package provides
convenient functions for summary, visualizations, and fit diagnostics.
Author: František Bartoš [aut, cre] (<https://orcid.org/0000-0002-0018-5573>),
Maximilian Maier [aut] (<https://orcid.org/0000-0002-9873-6096>),
Eric-Jan Wagenmakers [ths] (<https://orcid.org/0000-0003-1596-1034>),
Joris Goosen [ctb]
Maintainer: František Bartoš <f.bartos96@gmail.com>
Diff between RoBMA versions 1.2.0 dated 2021-01-21 and 1.2.1 dated 2021-02-16
DESCRIPTION | 6 +++--- MD5 | 16 ++++++++-------- NEWS.md | 4 ++++ R/main.R | 15 +++++++++++---- R/priors.R | 3 ++- build/partial.rdb |binary inst/doc/CustomEnsembles.html | 4 ++-- inst/doc/ReproducingBMA.html | 4 ++-- inst/doc/WarningsAndErrors.html | 4 ++-- 9 files changed, 34 insertions(+), 22 deletions(-)
Title: Read Stable Isotope Data Files
Description: Interface to the raw data file formats commonly encountered in scientific disciplines that make use of stable isotopes.
Author: Sebastian Kopf [aut, cre] (<https://orcid.org/0000-0002-2044-0201>),
Brett Davidheiser-Kroll [aut] (<https://orcid.org/0000-0002-6153-7851>),
Ilja Kocken [aut] (<https://orcid.org/0000-0003-2196-8718>)
Maintainer: Sebastian Kopf <sebastian.kopf@colorado.edu>
Diff between isoreader versions 1.2.7 dated 2020-11-04 and 1.3.0 dated 2021-02-16
isoreader-1.2.7/isoreader/R/isoread_rda.R |only isoreader-1.2.7/isoreader/man/iso_export_to_rda.Rd |only isoreader-1.3.0/isoreader/DESCRIPTION | 41 isoreader-1.3.0/isoreader/MD5 | 138 isoreader-1.3.0/isoreader/NAMESPACE | 17 isoreader-1.3.0/isoreader/NEWS.md | 12 isoreader-1.3.0/isoreader/R/export.R | 65 isoreader-1.3.0/isoreader/R/isoread.R | 21 isoreader-1.3.0/isoreader/R/isoread_flow_iarc.R | 26 isoreader-1.3.0/isoreader/R/package.R | 4 isoreader-1.3.0/isoreader/R/units.R | 1 isoreader-1.3.0/isoreader/R/utils_xml_files.R | 42 isoreader-1.3.0/isoreader/R/zzz.R | 17 isoreader-1.3.0/isoreader/README.md | 134 isoreader-1.3.0/isoreader/inst/doc/continuous_flow.R | 48 isoreader-1.3.0/isoreader/inst/doc/continuous_flow.Rmd | 48 isoreader-1.3.0/isoreader/inst/doc/continuous_flow.html | 5708 +++++++--- isoreader-1.3.0/isoreader/inst/doc/development.R | 8 isoreader-1.3.0/isoreader/inst/doc/development.Rmd | 8 isoreader-1.3.0/isoreader/inst/doc/development.html | 1481 -- isoreader-1.3.0/isoreader/inst/doc/dual_inlet.R | 44 isoreader-1.3.0/isoreader/inst/doc/dual_inlet.Rmd | 44 isoreader-1.3.0/isoreader/inst/doc/dual_inlet.html | 3271 +++-- isoreader-1.3.0/isoreader/inst/doc/operations.Rmd | 2 isoreader-1.3.0/isoreader/inst/doc/operations.html | 94 isoreader-1.3.0/isoreader/inst/doc/quick_start.R | 5 isoreader-1.3.0/isoreader/inst/doc/quick_start.Rmd | 14 isoreader-1.3.0/isoreader/inst/doc/quick_start.html | 1448 -- isoreader-1.3.0/isoreader/inst/doc/scan.R | 22 isoreader-1.3.0/isoreader/inst/doc/scan.Rmd | 22 isoreader-1.3.0/isoreader/inst/doc/scan.html | 2163 +-- isoreader-1.3.0/isoreader/man/iso_add_file_info.Rd | 2 isoreader-1.3.0/isoreader/man/iso_export_to_excel.Rd | 5 isoreader-1.3.0/isoreader/man/iso_export_to_feather.Rd | 5 isoreader-1.3.0/isoreader/man/iso_filter_files.Rd | 2 isoreader-1.3.0/isoreader/man/iso_filter_files_with_problems.Rd | 2 isoreader-1.3.0/isoreader/man/iso_get_all_data.Rd | 2 isoreader-1.3.0/isoreader/man/iso_get_bgrd_data.Rd | 2 isoreader-1.3.0/isoreader/man/iso_get_data_summary.Rd | 2 isoreader-1.3.0/isoreader/man/iso_get_file_info.Rd | 2 isoreader-1.3.0/isoreader/man/iso_get_raw_data.Rd | 2 isoreader-1.3.0/isoreader/man/iso_get_resistors.Rd | 2 isoreader-1.3.0/isoreader/man/iso_get_standards.Rd | 2 isoreader-1.3.0/isoreader/man/iso_get_vendor_data_table.Rd | 2 isoreader-1.3.0/isoreader/man/iso_mutate_file_info.Rd | 2 isoreader-1.3.0/isoreader/man/iso_parse_file_info.Rd | 2 isoreader-1.3.0/isoreader/man/iso_read_continuous_flow.Rd | 4 isoreader-1.3.0/isoreader/man/iso_read_dual_inlet.Rd | 4 isoreader-1.3.0/isoreader/man/iso_read_files.Rd | 4 isoreader-1.3.0/isoreader/man/iso_read_scan.Rd | 4 isoreader-1.3.0/isoreader/man/iso_rename_file_info.Rd | 2 isoreader-1.3.0/isoreader/man/iso_reread_files.Rd | 2 isoreader-1.3.0/isoreader/man/iso_save.Rd | 5 isoreader-1.3.0/isoreader/man/iso_select_file_info.Rd | 2 isoreader-1.3.0/isoreader/man/iso_set_default_read_parameters.Rd | 2 isoreader-1.3.0/isoreader/man/iso_set_file_root.Rd | 2 isoreader-1.3.0/isoreader/man/isoreader-package.Rd | 6 isoreader-1.3.0/isoreader/man/reread_iso_files.Rd | 2 isoreader-1.3.0/isoreader/tests/testthat/test-continuous-flow.R | 20 isoreader-1.3.0/isoreader/tests/testthat/test-deprecated.R | 8 isoreader-1.3.0/isoreader/tests/testthat/test-dual-inlet.R | 15 isoreader-1.3.0/isoreader/tests/testthat/test-export.R | 71 isoreader-1.3.0/isoreader/tests/testthat/test-isoread.R | 11 isoreader-1.3.0/isoreader/tests/testthat/test-scan.R | 10 isoreader-1.3.0/isoreader/tests/testthat/test-utils.R | 6 isoreader-1.3.0/isoreader/vignettes/continuous_flow.Rmd | 48 isoreader-1.3.0/isoreader/vignettes/development.Rmd | 8 isoreader-1.3.0/isoreader/vignettes/dual_inlet.Rmd | 44 isoreader-1.3.0/isoreader/vignettes/operations.Rmd | 2 isoreader-1.3.0/isoreader/vignettes/quick_start.Rmd | 14 isoreader-1.3.0/isoreader/vignettes/scan.Rmd | 22 71 files changed, 7962 insertions(+), 7340 deletions(-)
Title: Exponential Multivariate Hawkes Model
Description: Simulate and fitting exponential multivariate Hawkes model.
This package simulates a multivariate Hawkes model, introduced by Hawkes (1971) <doi:10.2307/2334319>, with an exponential kernel and fits the parameters from the data.
Models with the constant parameters, as well as complex dependent structures, can also be simulated and estimated.
The estimation is based on the maximum likelihood method, introduced by introduced by Ozaki (1979) <doi:10.1007/BF02480272>, with 'maxLik' package.
Author: Kyungsub Lee [aut, cre]
Maintainer: Kyungsub Lee <kyungsub@gmail.com>
Diff between emhawkes versions 0.9.0 dated 2018-09-17 and 0.9.5 dated 2021-02-16
DESCRIPTION | 12 MD5 | 39 + NAMESPACE | 2 R/harrival.R | 122 +++++- R/hfit.R | 101 +++-- R/hgfit.R |only R/hllf.R | 193 ++++++--- R/hmoment.R | 28 - R/hsim.R | 110 +++-- R/hspec.R | 23 - R/utilities.R | 63 +-- build/vignette.rds |binary inst/doc/example.R | 36 - inst/doc/example.Rmd | 6 inst/doc/example.html | 906 ++++++++++++++++++++++++--------------------- man/hfit.Rd | 58 ++ man/hsim.Rd | 1 man/hspec-class.Rd | 7 man/infer_lambda.Rd |only man/logLik-hspec-method.Rd | 23 - man/residual_process.Rd |only vignettes/example.Rmd | 6 22 files changed, 1056 insertions(+), 680 deletions(-)
Title: A Collection of R Functions for Directional Data Analysis
Description: A collection of functions for directional data (including massive, with millions of observations, data) analysis. Hypothesis testing, discriminant and regression analysis, MLE of distributions and more are included. The standard textbook for such data is the "Directional Statistics" by Mardia, K. V. and Jupp, P. E. (2000). Other references include a) Phillip J. Paine, Simon P. Preston Michail Tsagris and Andrew T. A. Wood (2018). An elliptically symmetric angular Gaussian distribution. Statistics and Computing 28(3): 689-697. <doi:10.1007/s11222-017-9756-4>. b) Tsagris M. and Alenazi A. (2019). Comparison of discriminant analysis methods on the sphere. Communications in Statistics: Case Studies, Data Analysis and Applications 5(4):467--491. <doi:10.1080/23737484.2019.1684854>. c) P. J. Paine, S. P. Preston, M. Tsagris and Andrew T. A. Wood (2020). Spherical regression models with general covariates and anisotropic errors. Statistics and Computing 30(1): 153--165. <doi:10.1007/s11222-019-09872-2>.
Author: Michail Tsagris, Giorgos Athineou, Anamul Sajib, Eli Amson, Micah J. Waldstein
Maintainer: Michail Tsagris <mtsagris@uoc.gr>
Diff between Directional versions 4.7 dated 2021-02-15 and 4.8 dated 2021-02-16
DESCRIPTION | 6 +++--- MD5 | 6 +++--- R/circ.summary.R | 2 +- man/Directional-package.Rd | 2 +- 4 files changed, 8 insertions(+), 8 deletions(-)
Title: Descriptive Statistics
Description: Weighted frequency and contingency tables of categorical
variables and of the comparison of the mean value of a numerical
variable by the levels of a factor, and methods to produce xtable
objects of the tables and to plot them. There are also functions to
facilitate the character encoding conversion of objects, to quickly
convert fixed width files into csv ones, and to export a data.frame to
a text file with the necessary R and SPSS codes to reread the data.
Author: Jakson Aquino. Includes R source code and/or documentation
written by Dirk Enzmann, Marc Schwartz, Nitin Jain, and Stefan
Kraft
Maintainer: Jakson Aquino <jalvesaq@gmail.com>
Diff between descr versions 1.1.4 dated 2018-01-19 and 1.1.5 dated 2021-02-16
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- NEWS | 6 ++++++ R/CrossTable.R | 7 ++++--- R/crosstab.R | 10 +++++++--- R/descr.R | 3 ++- man/crosstab.Rd | 6 ++++++ man/data.frame2txt.Rd | 2 ++ 8 files changed, 38 insertions(+), 18 deletions(-)
Title: The R Interface to 'SyncroSim'
Description: 'SyncroSim' is a generalized framework for managing scenario-based
datasets (<https://syncrosim.com/>). 'rsyncrosim' provides an interface to
'SyncroSim'. Simulation models can be added to 'SyncroSim' in order to
transform these datasets, taking advantage of general features such as
defining scenarios of model inputs, running Monte Carlo simulations, and
summarizing model outputs. 'rsyncrosim' requires 'SyncroSim' 2.2.13 or higher
(API documentation: <https://docs.syncrosim.com/>).
Author: Colin Daniel [aut, cre],
Josie Hughes [aut],
Alex Embrey [aut],
Leonardo Frid [aut],
Valentin Lucet [aut],
Tabitha Kennedy [aut],
ApexRMS [cph]
Maintainer: Colin Daniel <colin.daniel@apexrms.com>
Diff between rsyncrosim versions 1.2.4 dated 2020-06-04 and 1.2.9 dated 2021-02-16
DESCRIPTION | 35 + MD5 | 211 ++++++----- NAMESPACE | 4 NEWS.md |only R/AAAClassDefinitions.R | 8 R/addModule.R | 4 R/addPackage.R | 4 R/autogentags.R |only R/backup.R | 4 R/basePackage.R | 4 R/breakpoint.R | 18 - R/command.R | 4 R/datasheet.R | 284 +++++++++------ R/datasheetRaster.R | 53 +- R/dateModified.R | 2 R/delete.R | 2 R/deleteModule.R | 4 R/deletePackage.R | 2 R/description.R | 2 R/disableAddon.R | 6 R/enableAddon.R | 8 R/filepath.R | 4 R/ignoreDependencies.R |only R/info.R | 4 R/internalHelpers.R | 25 + R/mergeDependencies.R | 6 R/model.R | 4 R/module.R | 4 R/name.R | 4 R/owner.R | 4 R/package.R | 6 R/printCmd.R | 4 R/project.R | 12 R/projectId.R | 4 R/readOnly.R | 14 R/rsyncrosim.R | 2 R/run.R | 6 R/saveDatasheet.R | 31 - R/scenario.R | 4 R/session.R | 12 R/silent.R | 8 R/sqlStatement.R | 10 R/ssimEnvironment.R | 14 R/ssimLibrary.R | 15 R/ssimUpdate.R | 4 README.md | 34 - build/vignette.rds |binary demo/rsyncrosim-demo.R | 15 inst/doc/rsyncrosim_tutorial.R | 375 ++++++++++---------- inst/doc/rsyncrosim_tutorial.Rmd | 20 - inst/doc/rsyncrosim_tutorial.html | 680 +++++++++++--------------------------- inst/images/sticker.png |binary man/Project-class.Rd | 4 man/Scenario-class.Rd | 2 man/addBreakpoint.Rd | 12 man/addModule.Rd | 4 man/addPackage.Rd | 4 man/autogentags-set.Rd |only man/autogentags.Rd |only man/backup.Rd | 4 man/basePackage.Rd | 4 man/breakpoint.Rd | 2 man/command.Rd | 2 man/datasheet.Rd | 10 man/datasheetRaster.Rd | 2 man/dateModified.Rd | 2 man/delete.Rd | 2 man/deleteBreakpoint.Rd | 4 man/deleteModule.Rd | 4 man/deletePackage.Rd | 2 man/description-set.Rd | 2 man/disableAddon.Rd | 6 man/enableAddon.Rd | 8 man/filepath.Rd | 2 man/ignoreDependencies-set.Rd |only man/ignoreDependencies.Rd |only man/info.Rd | 4 man/mergeDependencies-set.Rd | 4 man/mergeDependencies.Rd | 2 man/model.Rd | 4 man/module.Rd | 4 man/name-set.Rd | 4 man/owner-set.Rd | 2 man/owner.Rd | 2 man/package.Rd | 6 man/printCmd.Rd | 4 man/project.Rd | 12 man/projectId.Rd | 4 man/readOnly-set.Rd | 8 man/readOnly.Rd | 6 man/rsyncrosim.Rd | 2 man/run.Rd | 4 man/saveDatasheet.Rd | 21 - man/scenario.Rd | 4 man/session-set.Rd | 2 man/session.Rd | 10 man/silent-set.Rd | 6 man/silent.Rd | 2 man/sqlStatement.Rd | 10 man/ssimEnvironment-input.Rd | 2 man/ssimEnvironment-output.Rd | 2 man/ssimEnvironment-progress.Rd | 2 man/ssimEnvironment-temp.Rd | 4 man/ssimEnvironment.Rd | 4 man/ssimLibrary.Rd | 10 man/ssimUpdate.Rd | 4 man/tempfilepath.Rd | 2 tests/testthat/test-integration.R | 3 tests/testthat/test-unit.R | 57 +-- vignettes/rsyncrosim_tutorial.Rmd | 20 - 110 files changed, 1065 insertions(+), 1238 deletions(-)
Title: Data Sets for Keith McNulty's Handbook of Regression Modeling in
People Analytics
Description: Data sets for statistical inference modeling related to People Analytics.
Contains various data sets from the book 'Handbook of Regression Modeling in People Analytics'
by Keith McNulty (2020).
Author: Keith McNulty [aut, cre] (<https://orcid.org/0000-0002-2332-1654>)
Maintainer: Keith McNulty <keith.mcnulty@gmail.com>
Diff between peopleanalyticsdata versions 0.1.0 dated 2021-01-07 and 0.2.0 dated 2021-02-16
DESCRIPTION | 8 ++++---- MD5 | 42 +++++++++++++++++++++++++++++------------- NEWS.md |only R/data-charity_donation.R | 2 +- R/data-employee_performance.R |only R/data-employee_survey.R | 2 +- R/data-graduates.R |only R/data-health_insurance.R | 4 ++-- R/data-learning.R |only R/data-politics_survey.R | 2 +- R/data-promotion.R |only R/data-recruiting.R |only README.md | 23 +++++++++++++++++++++-- data/employee_performance.rda |only data/employee_survey.rda |binary data/graduates.rda |only data/job_retention.rda |binary data/learning.rda |only data/politics_survey.rda |binary data/promotion.rda |only data/recruiting.rda |only man/charity_donation.Rd | 2 +- man/employee_performance.Rd |only man/employee_survey.Rd | 2 +- man/graduates.Rd |only man/health_insurance.Rd | 4 ++-- man/learning.Rd |only man/politics_survey.Rd | 2 +- man/promotion.Rd |only man/recruiting.Rd |only 30 files changed, 64 insertions(+), 29 deletions(-)
More information about peopleanalyticsdata at CRAN
Permanent link
Title: Parse Messy Geographic Coordinates
Description: Parse geographic coordinates from various formats
to decimal degree numeric values. Parse coordinates into
their parts (degree, minutes, seconds); calculate hemisphere
from coordinates; pull out individually degrees,
minutes, or seconds; add and subtract degrees, minutes,
and seconds. C++ code herein originally inspired from code
written by Jeffrey D. Bogan, but then completely re-written.
Author: Scott Chamberlain [aut, cre] (<https://orcid.org/0000-0003-1444-9135>),
Alban Sagouis [ctb],
Jeffrey Bogan [ctb] (C++ code originally from Jeffrey Bogan, but
completely re-written),
Julien Brun [rev] (Julien Brun reviewed the package, see
https://github.com/ropensci/onboarding/issues/341),
Maria Munafó [rev] (Maria Munafó reviewed the package, see
https://github.com/ropensci/onboarding/issues/341),
rOpenSci [fnd] (https://ropensci.org)
Maintainer: Scott Chamberlain <sckott@protonmail.com>
Diff between parzer versions 0.3.0 dated 2020-10-13 and 0.4.0 dated 2021-02-16
DESCRIPTION | 10 +++++----- LICENSE | 2 +- MD5 | 15 ++++++++------- NEWS.md | 8 ++++++++ R/zzz.R | 22 +++++++++++++++++----- build/vignette.rds |binary inst/doc/parzer.html | 5 +++-- tests/testthat/test-mbcs-locale.R |only tests/testthat/test-utils.R | 2 +- 9 files changed, 43 insertions(+), 21 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-08-10 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-09-13 0.1.2
2016-03-18 0.1.1
2015-06-25 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-01-19 0.3.0
2017-06-15 0.2.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-01-18 0.3-11
2021-01-06 0.3-10
2020-01-13 0.3-9
2018-03-30 0.3-8
2018-01-19 0.3-7
2015-12-22 0.3-6
2013-05-02 0.3-5
2013-04-29 0.3-4
2013-01-30 0.3-3
2012-12-05 0.3-2
2012-09-11 0.3-1
2012-03-27 0.3-0
2010-10-09 0.2-3
2010-07-29 0.2-2
2010-04-19 0.2-1
2009-11-12 0.2-0
2009-09-09 0.1-5
2009-07-01 0.1-4
2009-05-17 0.1-3
2009-03-23 0.1-2
2009-03-13 0.1-1