Title: Interface to 'Virtuoso' using 'ODBC'
Description: Provides users with a simple and convenient
mechanism to manage and query a 'Virtuoso' database using the 'DBI' (Data-Base Interface)
compatible 'ODBC' (Open Database Connectivity) interface.
'Virtuoso' is a high-performance "universal server," which can act
as both a relational database, supporting standard Structured Query
Language ('SQL') queries, while also supporting data following the
Resource Description Framework ('RDF') model for Linked Data.
'RDF' data can be queried using 'SPARQL' ('SPARQL' Protocol and 'RDF' Query Language)
queries, a graph-based query that supports semantic reasoning.
This allows users to leverage the performance of local or remote 'Virtuoso' servers using
popular 'R' packages such as 'DBI' and 'dplyr', while also providing a
high-performance solution for working with large 'RDF' 'triplestores' from 'R.'
The package also provides helper routines to install, launch, and manage
a 'Virtuoso' server locally on 'Mac', 'Windows' and 'Linux' platforms using
the standard interactive installers from the 'R' command-line. By
automatically handling these setup steps, the package can make using 'Virtuoso'
considerably faster and easier for a most users to deploy in a local
environment. Managing the bulk import of triples
from common serializations with a single intuitive command is another key
feature of this package. Bulk import performance can be tens to
hundreds of times faster than the comparable imports using existing 'R' tools,
including 'rdflib' and 'redland' packages.
Author: Carl Boettiger [aut, cre, cph]
(<https://orcid.org/0000-0002-1642-628X>),
Bryce Mecum [ctb] (<https://orcid.org/0000-0002-0381-3766>)
Maintainer: Carl Boettiger <cboettig@gmail.com>
Diff between virtuoso versions 0.1.7 dated 2021-11-01 and 0.1.8 dated 2021-11-02
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- NEWS.md | 5 ++++- R/vos_install.R | 12 ++++++++++-- inst/doc/installation.html | 4 ++-- tests/testthat/test-vos_install.R | 3 +++ 6 files changed, 27 insertions(+), 13 deletions(-)
Title: Geocoding Made Easy
Description: An intuitive interface for getting data from geocoding services.
Author: Jesse Cambon [aut, cre] (<https://orcid.org/0000-0001-6854-1514>),
Diego Hernangómez [aut] (<https://orcid.org/0000-0001-8457-4658>),
Christopher Belanger [aut] (<https://orcid.org/0000-0003-2070-5721>),
Daniel Possenriede [aut] (<https://orcid.org/0000-0002-6738-9845>)
Maintainer: Jesse Cambon <jesse.cambon@gmail.com>
Diff between tidygeocoder versions 1.0.4 dated 2021-10-17 and 1.0.5 dated 2021-11-02
tidygeocoder-1.0.4/tidygeocoder/inst/doc/tidygeocoder.R |only tidygeocoder-1.0.5/tidygeocoder/DESCRIPTION | 6 tidygeocoder-1.0.5/tidygeocoder/MD5 | 64 +- tidygeocoder-1.0.5/tidygeocoder/NEWS.md | 8 tidygeocoder-1.0.5/tidygeocoder/R/api_url.R | 2 tidygeocoder-1.0.5/tidygeocoder/R/batch_geocoding.R | 3 tidygeocoder-1.0.5/tidygeocoder/R/documentation.R | 2 tidygeocoder-1.0.5/tidygeocoder/R/geo.R | 67 +- tidygeocoder-1.0.5/tidygeocoder/R/geo_methods.R | 6 tidygeocoder-1.0.5/tidygeocoder/R/geocode.R | 21 tidygeocoder-1.0.5/tidygeocoder/R/geocode_combine.R | 20 tidygeocoder-1.0.5/tidygeocoder/R/global_variables.R | 3 tidygeocoder-1.0.5/tidygeocoder/R/input_handling.R | 7 tidygeocoder-1.0.5/tidygeocoder/R/query_factory.R | 3 tidygeocoder-1.0.5/tidygeocoder/R/reverse_batch_geocoding.R | 2 tidygeocoder-1.0.5/tidygeocoder/R/reverse_geo.R | 39 + tidygeocoder-1.0.5/tidygeocoder/R/reverse_geocode.R | 15 tidygeocoder-1.0.5/tidygeocoder/R/tidygeocoder.R | 2 tidygeocoder-1.0.5/tidygeocoder/R/utils.R | 2 tidygeocoder-1.0.5/tidygeocoder/README.md | 56 - tidygeocoder-1.0.5/tidygeocoder/build/vignette.rds |binary tidygeocoder-1.0.5/tidygeocoder/inst/CITATION | 9 tidygeocoder-1.0.5/tidygeocoder/inst/doc/tidygeocoder.Rmd | 309 ++++++++-- tidygeocoder-1.0.5/tidygeocoder/inst/doc/tidygeocoder.html | 135 ++-- tidygeocoder-1.0.5/tidygeocoder/man/figures/README-usamap-1.png |binary tidygeocoder-1.0.5/tidygeocoder/man/geo.Rd | 20 tidygeocoder-1.0.5/tidygeocoder/man/geo_combine.Rd | 6 tidygeocoder-1.0.5/tidygeocoder/man/geocode.Rd | 4 tidygeocoder-1.0.5/tidygeocoder/man/geocode_combine.Rd | 6 tidygeocoder-1.0.5/tidygeocoder/man/reverse_geo.Rd | 18 tidygeocoder-1.0.5/tidygeocoder/man/reverse_geocode.Rd | 2 tidygeocoder-1.0.5/tidygeocoder/man/tidygeocoder-package.Rd | 2 tidygeocoder-1.0.5/tidygeocoder/vignettes/tidygeocoder.Rmd | 309 ++++++++-- tidygeocoder-1.0.5/tidygeocoder/vignettes/tidygeocoder.Rmd.orig |only 34 files changed, 825 insertions(+), 323 deletions(-)
Title: Split Knockoffs for Structural Sparsity
Description: A novel method for controlling the false discovery rate (FDR)
in structural sparsity setting. This proposed scheme relaxes the linear subspace
constraint to its neighborhood, often known as variable splitting in optimization.
Simulation experiments can be reproduced following the Vignette. We include data
(both .mat and .csv format) and application with our method of Alzheimer’s Disease
study in this package.
'Split Knockoffs' is defined in Cao et al. (2021) <arXiv:2103.16159>.
Author: Haoxue Wang [aut, cre] (Development of the whole packages),
Yang Cao [aut] (Revison of this package),
Xinwei Sun [aut] (Original ideas about the package),
Yuan Yao [aut] (Testing for the package and management of the
development)
Maintainer: Haoxue Wang <haoxwang@student.ethz.ch>
Diff between SplitKnockoff versions 0.8 dated 2021-09-13 and 1.0 dated 2021-11-02
DESCRIPTION | 12 - MD5 | 25 +- NAMESPACE | 1 R/create.R | 4 R/decompose.R | 1 R/statistics_W.R | 197 ++++++++++++++++++++- inst/doc/Splitknockoff.Rmd | 106 +++++++++++ inst/doc/Splitknockoff.html | 105 ++++++++++- inst/extdata |only man/split_knockoffs.statistics.pathorder.W_path.Rd | 2 man/split_knockoffs.statistics.sign.W_path.Rd |only vignettes/Splitknockoff.Rmd | 106 +++++++++++ 12 files changed, 532 insertions(+), 27 deletions(-)
Title: R Session Information
Description: Query and print information about the current R
session. It is similar to 'utils::sessionInfo()', but includes more
information about packages, and where they were installed from.
Author: Gábor Csárdi [cre],
Hadley Wickham [aut],
Winston Chang [aut],
Robert Flight [aut],
Kirill Müller [aut],
Jim Hester [aut],
R Core team [ctb]
Maintainer: Gábor Csárdi <csardi.gabor@gmail.com>
Diff between sessioninfo versions 1.2.0 dated 2021-10-31 and 1.2.1 dated 2021-11-02
sessioninfo-1.2.0/sessioninfo/tests/test-env.R |only sessioninfo-1.2.0/sessioninfo/tests/test-env.Rout.save |only sessioninfo-1.2.1/sessioninfo/DESCRIPTION | 10 +++++--- sessioninfo-1.2.1/sessioninfo/MD5 | 17 +++++++-------- sessioninfo-1.2.1/sessioninfo/NEWS.md | 8 +++++++ sessioninfo-1.2.1/sessioninfo/R/package-info.R | 16 +++++++------- sessioninfo-1.2.1/sessioninfo/R/printing.R | 3 +- sessioninfo-1.2.1/sessioninfo/R/session-info.R | 2 - sessioninfo-1.2.1/sessioninfo/man/package_info.Rd | 8 +++---- sessioninfo-1.2.1/sessioninfo/man/session_info.Rd | 8 +++---- sessioninfo-1.2.1/sessioninfo/tests/testthat/test-skip.R |only 11 files changed, 41 insertions(+), 31 deletions(-)
Title: Ex Post Survey Data Harmonization
Description: Assist in reproducible retrospective (ex-post) harmonization
of data, particularly individual level survey data, by providing tools
for organizing metadata, standardizing the coding of variables, and
variable names and value labels, including missing values, and
documenting the data transformations, with the help of comprehensive
s3 classes.
Author: Daniel Antal [aut, cre] (<https://orcid.org/0000-0001-7513-6760>),
Marta Kolczynska [ctb] (<https://orcid.org/0000-0003-4981-0437>),
Pyry Kantanen [ctb] (<https://orcid.org/0000-0003-2853-2765>),
Diego Hernangómez Herrero [ctb]
(<https://orcid.org/0000-0001-8457-4658>)
Maintainer: Daniel Antal <daniel.antal@ceemid.eu>
Diff between retroharmonize versions 0.1.17 dated 2021-06-27 and 0.2.0 dated 2021-11-02
DESCRIPTION | 62 + MD5 | 140 ++-- NAMESPACE | 12 NEWS.md | 29 R/assertions.R |only R/concatenate.R | 1 R/create_codebook.R |only R/document_survey_item.R | 4 R/harmonize_values.R | 126 +-- R/harmonize_var_names.R | 4 R/harmonize_waves.R | 12 R/label_harmonize.R | 2 R/labelled_spss_survey.R | 14 R/merge_waves.R | 13 R/metadata_create.R | 97 ++ R/na_range_to_values.R | 2 R/read_dta.R |only R/read_rds.R | 22 R/read_spss.R | 106 ++- R/read_surveys.R | 60 + R/retroharmonize.R | 22 R/subset_save_surveys.R | 4 R/subset_waves.R | 5 R/suggest_var_names.R | 7 R/survey.R | 64 + R/utils.R | 61 - README.md | 45 - inst/doc/afrobarometer.R | 2 inst/doc/afrobarometer.Rmd | 2 inst/doc/afrobarometer.html | 78 +- inst/doc/arabbarometer.Rmd | 7 inst/doc/arabbarometer.html | 917 ++++++++++++++-------------- inst/doc/eurobarometer.R | 15 inst/doc/eurobarometer.Rmd | 17 inst/doc/eurobarometer.html | 25 inst/doc/harmonize_labels.html | 22 inst/figures |only man/collect_val_labels.Rd | 3 man/create_codebook.Rd |only man/harmonize_na_values.Rd | 3 man/harmonize_values.Rd | 14 man/harmonize_var_names.Rd | 3 man/harmonize_waves.Rd | 12 man/label_normalize.Rd | 17 man/merge_waves.Rd | 16 man/metadata_create.Rd | 25 man/metadata_initialize.Rd |only man/na_range_to_values.Rd | 12 man/pull_survey.Rd | 1 man/read_dta.Rd |only man/read_rds.Rd | 1 man/read_spss.Rd | 13 man/read_surveys.Rd | 17 man/retroharmonize.Rd | 25 man/subset_save_surveys.Rd | 1 man/subset_waves.Rd | 3 man/suggest_permanent_names.Rd | 5 man/suggest_var_names.Rd | 10 man/survey.Rd | 13 man/validate_harmonize_labels.Rd |only tests/testthat/test-assertions.R |only tests/testthat/test-codebook_create.R |only tests/testthat/test-concatenate_and_rbind.R | 15 tests/testthat/test-harmonize_values.R | 25 tests/testthat/test-harmonize_waves.R | 6 tests/testthat/test-labelled_spss_survey.R | 32 tests/testthat/test-merge_waves.R | 3 tests/testthat/test-metadata_create.R | 15 tests/testthat/test-na_range_to_values.R | 3 tests/testthat/test-read_spss.R | 3 tests/testthat/test-read_surveys.R | 15 tests/testthat/test-subset_save_surveys.R | 8 tests/testthat/test-survey.R | 2 vignettes/afrobarometer.Rmd | 2 vignettes/arabbarometer.Rmd | 7 vignettes/eurobarometer.Rmd | 17 76 files changed, 1330 insertions(+), 1016 deletions(-)
More information about retroharmonize at CRAN
Permanent link
Title: Spectral Clustering-Based Method for Identifying B Cell Clones
Description: Provides a computational framework for identification of B cell clones from
Adaptive Immune Receptor Repertoire sequencing (AIRR-Seq) data. Three main
functions are included (identicalClones, hierarchicalClones, and spectralClones)
that perform clustering among sequences of BCRs/IGs (B cell receptors/immunoglobulins)
which share the same V gene, J gene and junction length.
Nouri N and Kleinstein SH (2018) <doi: 10.1093/bioinformatics/bty235>.
Nouri N and Kleinstein SH (2019) <doi: 10.1101/788620>.
Gupta NT, et al. (2017) <doi: 10.4049/jimmunol.1601850>.
Author: Nima Nouri [aut],
Edel Aron [ctb],
Jason Vander Heiden [aut, cre],
Steven Kleinstein [aut, cph]
Maintainer: Jason Vander Heiden <jason.vanderheiden@gmail.com>
Diff between scoper versions 1.1.0 dated 2020-08-10 and 1.2.0 dated 2021-11-02
DESCRIPTION | 18 +- MD5 | 31 ++-- NAMESPACE | 1 NEWS.md | 18 ++ R/Functions.R | 320 +++++++++++++++++++++++++------------------ R/Scoper.R | 2 README.md | 6 build/vignette.rds |binary inst/doc/Scoper-Vignette.pdf |binary man/hierarchicalClones.Rd | 26 ++- man/identicalClones.Rd | 24 ++- man/plotCloneSummary.Rd | 2 man/spectralClones.Rd | 26 ++- src/RcppExports.cpp | 5 tests |only 15 files changed, 293 insertions(+), 186 deletions(-)
Title: Automate Code for Adding Labels, Renaming Variables, and
Converting ASCII Files
Description: Label, rename, and convert datasets and ASCII files more efficiently. 'speedycode' automates the code necessary for labeling variables with the 'labelled' package, renaming variables with 'dplyr' syntax, and converting ASCII files with the 'readroper' package. Most functions require only the name of the dataset and the code will be automatically written. Some convenience functions useful for converting ASCII files are also included.
Author: Jacob Harris
Maintainer: Jacob Harris <jh2689@cornell.edu>
Diff between speedycode versions 0.1.0 dated 2021-10-26 and 0.2.0 dated 2021-11-02
DESCRIPTION | 6 +++--- MD5 | 4 ++-- R/speedycode.R | 20 ++++++++++---------- 3 files changed, 15 insertions(+), 15 deletions(-)
Title: R Interface to NLopt
Description: Solve optimization problems using an R interface to NLopt. NLopt is a
free/open-source library for nonlinear optimization, providing a common
interface for a number of different free optimization routines available
online as well as original implementations of various other algorithms.
See <http://ab-initio.mit.edu/wiki/index.php/NLopt_Introduction> for more
information on the available algorithms. During installation of nloptr on
Unix-based systems, the installer checks whether the NLopt library is
installed on the system. If the NLopt library cannot be found, the code
is compiled using the NLopt source included in the nloptr package.
Author: Jelmer Ypma [aut, cre],
Steven G. Johnson [aut] (author of the NLopt C library),
Hans W. Borchers [ctb],
Dirk Eddelbuettel [ctb],
Brian Ripley [ctb] (build process on multiple OS),
Kurt Hornik [ctb] (build process on multiple OS),
Julien Chiquet [ctb],
Avraham Adler [ctb] (removal deprecated calls from tests,
<https://orcid.org/0000-0002-3039-0703>)
Maintainer: Jelmer Ypma <uctpjyy@ucl.ac.uk>
Diff between nloptr versions 1.2.2.2 dated 2020-07-02 and 1.2.2.3 dated 2021-11-02
DESCRIPTION | 6 MD5 | 14 R/PkgFlags.R | 13 build/vignette.rds |binary configure | 2128 +++++++++++++++++++++++++++------------------------- configure.ac | 12 inst/doc/nloptr.R | 340 ++++---- inst/doc/nloptr.pdf |binary 8 files changed, 1328 insertions(+), 1185 deletions(-)
Title: Exact Multinomial Test: Goodness-of-Fit Test for Discrete
Multivariate Data
Description: Goodness-of-fit tests for discrete multivariate data. It is
tested if a given observation is likely to have occurred under
the assumption of an ab-initio model. Monte Carlo methods are provided to
make the package capable of solving high-dimensional problems.
Author: Uwe Menzel
Maintainer: Uwe Menzel <uwemenzel@gmail.com>
Diff between EMT versions 1.1 dated 2013-01-29 and 1.2 dated 2021-11-02
DESCRIPTION | 18 - MD5 | 15 - NAMESPACE | 4 NEWS |only R/EMT.R | 450 +++++++++++++++++++++--------------------------- man/EMT-internal.Rd | 71 +++---- man/EMT-package.Rd | 66 +++---- man/multinomial.test.Rd | 241 ++++++++++++------------- man/plotMultinom.Rd | 100 +++++----- 9 files changed, 456 insertions(+), 509 deletions(-)
Title: 'Htmlwidget' for 'Vega' and 'Vega-Lite'
Description: 'Vega' and 'Vega-Lite' parse text in 'JSON' notation to render
chart-specifications into 'HTML'. This package is used to facilitate the
rendering. It also provides a means to interact with signals, events,
and datasets in a 'Vega' chart using 'JavaScript' or 'Shiny'.
Author: Ian Lyttle [aut, cre] (<https://orcid.org/0000-0001-9962-4849>),
Vega/Vega-Lite Developers [aut],
Alicia Schep [ctb] (<https://orcid.org/0000-0002-3915-0618>),
Stuart Lee [ctb],
Kanit Wongsuphasawat [ctb] (Vega/Vega-Lite library),
Dominik Moritz [ctb] (Vega/Vega-Lite library),
Arvind Satyanarayan [ctb] (Vega/Vega-Lite library),
Jeffrey Heer [ctb] (Vega/Vega-Lite library),
Mike Bostock [ctb] (D3 library),
David Frank [ctb] (node-fetch library),
Hadley Wickham [ctb] (s3_register)
Maintainer: Ian Lyttle <ian.lyttle@se.com>
Diff between vegawidget versions 0.3.2 dated 2021-01-12 and 0.3.3 dated 2021-11-02
DESCRIPTION | 6 +++--- MD5 | 14 +++++++------- NEWS.md | 6 ++++++ R/utils-vegaspec.R | 1 + README.md | 10 +++++++++- build/vignette.rds |binary inst/doc/vegawidget.html | 1 + tests/testthat/test-vegaspec.R | 4 +++- 8 files changed, 30 insertions(+), 12 deletions(-)
Title: R Wrapper for the 'Bit.ly' and 'Is.gd'/'v.gd' URL Shortening
Services
Description: Allows using two URL shortening services, which also provide
expanding and analytic functions. Specifically developed for 'Bit.ly' (which requires OAuth2) and 'is.gd' (no API key).
Author: John Malc [aut, cre] (@dmpe),
Andrea Dodet [ctb] (@andodet),
Stephen Synchronicity [ctb] (@yogat3ch)
Maintainer: John Malc <cincenko@outlook.com>
Diff between urlshorteneR versions 1.4.3 dated 2020-12-08 and 1.5.1 dated 2021-11-02
DESCRIPTION | 24 ++++++++++++------------ MD5 | 26 +++++++++++++------------- NEWS | 2 ++ R/isgd_links.R | 8 ++++---- R/vgd_links.R | 2 +- README.md | 2 -- build/vignette.rds |binary inst/doc/Tutorial.R | 4 ++-- inst/doc/Tutorial.Rmd | 14 +++++++------- inst/doc/Tutorial.html | 33 ++++++++++++++++++++------------- man/isgd_LinksExpand.Rd | 2 +- man/isgd_LinksShorten.Rd | 2 +- man/vgd_LinksShorten.Rd | 2 +- vignettes/Tutorial.Rmd | 14 +++++++------- 14 files changed, 71 insertions(+), 64 deletions(-)
Title: Wrapper for the Gnu Scientific Library
Description: An R wrapper for some of the functionality of the
Gnu Scientific Library.
Author: Robin K. S. Hankin [aut, cre] (<https://orcid.org/0000-0001-5982-0415>),
Andrew Clausen [ctb] (multimin functionality),
Duncan Murdoch [ctb] (qrng functions)
Maintainer: Robin K. S. Hankin <hankin.robin@gmail.com>
Diff between gsl versions 2.1-7 dated 2021-09-14 and 2.1-7.1 dated 2021-11-02
DESCRIPTION | 6 MD5 | 12 build/partial.rdb |binary build/vignette.rds |binary configure | 1784 +++++++++++++++++++++++++++++++++----------------- configure.ac | 6 inst/doc/gslpaper.pdf |binary 7 files changed, 1192 insertions(+), 616 deletions(-)
Title: Multiple Precision Arithmetic
Description: Multiple Precision Arithmetic (big integers and rationals,
prime number tests, matrix computation), "arithmetic without limitations"
using the C library GMP (GNU Multiple Precision Arithmetic).
Author: Antoine Lucas, Immanuel Scholz, Rainer Boehme <rb-gmp@reflex-studio.de>,
Sylvain Jasson <Sylvain.Jasson@inrae.fr>,
Martin Maechler <maechler@stat.math.ethz.ch>
Maintainer: Antoine Lucas <antoinelucas@gmail.com>
Diff between gmp versions 0.6-2 dated 2021-01-07 and 0.6-2.1 dated 2021-11-02
DESCRIPTION | 6 MD5 | 6 configure | 2312 ++++++++++++++++++++++++++++++++++++++++------------------- configure.ac | 6 4 files changed, 1614 insertions(+), 716 deletions(-)
Title: Lasso and Elastic-Net Regularized Generalized Linear Models
Description: Extremely efficient procedures for fitting the entire lasso or elastic-net regularization path for linear regression, logistic and multinomial regression models, Poisson regression, Cox model, multiple-response Gaussian, and the grouped multinomial regression. There are two new and important additions. The family argument can be a GLM family object, which opens the door to any programmed family. This comes with a modest computational cost, so when the built-in families suffice, they should be used instead. The other novelty is the relax option, which refits each of the active sets in the path unpenalized. The algorithm uses cyclical coordinate descent in a path-wise fashion, as described in the papers listed in the URL below.
Author: Jerome Friedman [aut],
Trevor Hastie [aut, cre],
Rob Tibshirani [aut],
Balasubramanian Narasimhan [aut],
Kenneth Tay [aut],
Noah Simon [aut],
Junyang Qian [ctb],
James Yang [aut]
Maintainer: Trevor Hastie <hastie@stanford.edu>
Diff between glmnet versions 4.1-2 dated 2021-06-24 and 4.1-3 dated 2021-11-02
DESCRIPTION | 20 ++++--- MD5 | 117 ++++++++++++++++++++++++++++++++++++++++------ NAMESPACE | 1 NEWS.md | 11 ++++ R/RcppExports.R |only R/elnet.R | 33 ++++++------ R/glmnet-package.R | 1 R/glmnet.R | 20 ++++++- R/glmnetFlex.R | 32 ++++++------ build/vignette.rds |binary inst/doc/Coxnet.pdf |binary inst/doc/glmnet.pdf |binary inst/doc/glmnetFamily.pdf |binary inst/doc/relax.pdf |binary src/Makevars |only src/RcppExports.cpp |only src/elnet_exp.cpp |only src/glmnet_init.c | 8 +++ src/glmnetpp |only src/internal_params.h |only src/pb_exp.cpp |only src/wls_exp.cpp |only 22 files changed, 187 insertions(+), 56 deletions(-)
Title: Set of Tools to Compute Various Climate Indices
Description: Set of tools to compute metrics and indices for climate analysis.
The package provides functions to compute extreme indices, evaluate the
agreement between models and combine theses models into an ensemble. Multi-model
time series of climate indices can be computed either after averaging the 2-D
fields from different models provided they share a common grid or by combining
time series computed on the model native grid. Indices can be assigned weights
and/or combined to construct new indices.
Author: BSC-CNS [aut, cph],
Nuria Perez-Zanon [aut, cre] (<https://orcid.org/0000-0001-8568-3071>),
An-Chi Ho [ctb],
Nicolau Manubens [ctb],
Alasdair Hunter [aut],
Louis-Philippe Caron [ctb]
Maintainer: Nuria Perez-Zanon <nuria.perez@bsc.es>
Diff between ClimProjDiags versions 0.1.1 dated 2021-01-07 and 0.1.2 dated 2021-11-02
DESCRIPTION | 9 ++++---- MD5 | 20 +++++++++---------- R/WeightedMean.R | 10 ++++++--- inst/doc/anomaly_agreement.Rmd | 30 +++++++++++++++------------- inst/doc/diurnaltemp.Rmd | 42 +++++++++++++++++++++++----------------- inst/doc/extreme_indices.Rmd | 41 ++++++++++++++++++++------------------- inst/doc/heatcoldwaves.Rmd | 16 ++++++++------- vignettes/anomaly_agreement.Rmd | 30 +++++++++++++++------------- vignettes/diurnaltemp.Rmd | 42 +++++++++++++++++++++++----------------- vignettes/extreme_indices.Rmd | 41 ++++++++++++++++++++------------------- vignettes/heatcoldwaves.Rmd | 16 ++++++++------- 11 files changed, 164 insertions(+), 133 deletions(-)
Title: R Wrapper for the 'Spotify' Web API
Description: An R wrapper for pulling data from the 'Spotify' Web API
<https://developer.spotify.com/documentation/web-api/> in bulk, or post items on a
'Spotify' user's playlist.
Author: Charlie Thompson [aut],
Daniel Antal [aut, cre] (<https://orcid.org/0000-0001-7513-6760>),
Josiah Parry [aut] (<https://orcid.org/0000-0001-9910-865X>),
Donal Phipps [aut],
Tom Wolff [aut]
Maintainer: Daniel Antal <daniel.antal@ceemid.eu>
Diff between spotifyr versions 2.2.1 dated 2021-06-17 and 2.2.3 dated 2021-11-02
DESCRIPTION | 10 ++--- MD5 | 44 +++++++++++++------------ NAMESPACE | 3 + NEWS.md | 11 +++++- R/artists.R | 45 ++++++++++++++++++++----- R/browse.R | 68 +++++++++++++++++++++++---------------- R/extensions.R | 30 ++++++++++++++--- R/library.R | 11 ++++-- R/shows.R |only R/utils.R | 4 +- README.md | 57 ++++++++++++++++---------------- man/figures/README-joyplot-1.png |binary man/get_artist_audio_features.Rd | 7 ++++ man/get_categories.Rd | 47 +++++++++++++------------- man/get_category.Rd | 2 - man/get_category_playlists.Rd | 11 ++++-- man/get_featured_playlists.Rd | 2 - man/get_new_releases.Rd | 2 - man/get_recommendations.Rd | 4 +- man/get_recommendations_all.Rd | 2 - man/get_related_artists.Rd | 6 ++- man/get_show.Rd |only man/get_show_episodes.Rd |only man/get_shows.Rd |only man/scopes.Rd | 2 - 25 files changed, 231 insertions(+), 137 deletions(-)
Title: Interface Utilities, Model Templates, Parallel Computing Methods
and Additional Distributions for MCMC Models in JAGS
Description: User-friendly interface utilities for MCMC models via
Just Another Gibbs Sampler (JAGS), facilitating the use of parallel
(or distributed) processors for multiple chains, automated control
of convergence and sample length diagnostics, and evaluation of the
performance of a model using drop-k validation or against simulated
data. Template model specifications can be generated using a standard
lme4-style formula interface to assist users less familiar with the
BUGS syntax. A JAGS extension module provides additional distributions
including the Pareto family of distributions, the DuMouchel prior and
the half-Cauchy prior.
Author: Matthew Denwood [aut, cre],
Martyn Plummer [cph] (Copyright holder of the code in
src/distributions/DPar1.*, configure.ac, R/rjags_functions.R, and
original copyright holder of some modified code where indicated)
Maintainer: Matthew Denwood <md@sund.ku.dk>
Diff between runjags versions 2.2.0-2 dated 2021-03-02 and 2.2.0-3 dated 2021-11-02
DESCRIPTION | 7 MD5 | 12 build/vignette.rds |binary configure | 3019 +++++++++++++++++++++++++++--------------------- configure.ac | 17 inst/doc/UserGuide.pdf |binary inst/doc/quickjags.html | 160 +- 7 files changed, 1814 insertions(+), 1401 deletions(-)
Title: Interpolation of Irregularly and Regularly Spaced Data
Description: Several cubic spline interpolation methods of H. Akima for irregular and
regular gridded data are available through this package, both for the bivariate case
(irregular data: ACM 761, regular data: ACM 760) and univariate case (ACM 433 and ACM 697).
Linear interpolation of irregular gridded data is also covered by reusing D. J. Renkas
triangulation code which is part of Akimas Fortran code. A bilinear interpolator
for regular grids was also added for comparison with the bicubic interpolator on
regular grids.
Author: Hiroshi Akima [aut, cph] (Fortran code (TOMS 760, 761, 697 and 433)),
Albrecht Gebhardt [aut, cre, cph] (R port (interp* functions), bicubic*
functions),
Thomas Petzold [ctb, cph] (aspline function),
Martin Maechler [ctb, cph] (interp2xyz function + enhancements),
YYYY Association for Computing Machinery, Inc. [cph] (covers code from
TOMS 760, 761, 697 and 433)
Maintainer: Albrecht Gebhardt <albrecht.gebhardt@aau.at>
Diff between akima versions 0.6-2.2 dated 2021-08-17 and 0.6-2.3 dated 2021-11-02
DESCRIPTION | 6 MD5 | 12 configure | 1847 +++++++++++++++++++++++++++++++++++------------------- configure.ac | 5 data/akima.rda |binary data/akima760.rda |binary data/franke.rda |binary 7 files changed, 1227 insertions(+), 643 deletions(-)
Title: R Interface to DSDP Semidefinite Programming Library
Description: R interface to DSDP semidefinite programming library. The DSDP software is a free open source implementation of an interior-point method for semidefinite programming. It provides primal and dual solutions, exploits low-rank structure and sparsity in the data, and has relatively low memory requirements for an interior-point method.
Author: Zhisu Zhu, Yinyu Ye (DSDP by Steve Benson, Yinyu Ye and Xiong Zhang)
Maintainer: Zhisu Zhu <zhuzhisu@alumni.stanford.edu>
Diff between Rdsdp versions 1.0.5 dated 2020-03-12 and 1.0.5.1 dated 2021-11-02
DESCRIPTION | 8 MD5 | 10 configure | 2456 ++++++++++++++++++++++++++++++++--------------------------- configure.ac | 5 man/Rdsdp.Rd | 2 man/dsdp.Rd | 2 6 files changed, 1350 insertions(+), 1133 deletions(-)
Title: R Interface to the CSDP Semidefinite Programming Library
Description: R interface to the CSDP semidefinite programming library. Installs version 6.1.1 of CSDP from the COIN-OR website if required. An existing installation of CSDP may be used by passing the proper configure arguments to the installation command. See the INSTALL file for further details.
Author: Hector Corrada Bravo [aut, cre],
Brian Borchers [aut],
Don van den Bergh [ctb]
Maintainer: Hector Corrada Bravo <hcorrada@gmail.com>
Diff between Rcsdp versions 0.1.57.1 dated 2020-03-09 and 0.1.57.2 dated 2021-11-02
DESCRIPTION | 8 MD5 | 8 configure | 2307 ++++++++++++++++++++++++++++++++--------------------------- configure.ac | 5 man/csdp.Rd | 2 5 files changed, 1271 insertions(+), 1059 deletions(-)
Title: Tools for Highfrequency Data Analysis
Description: Provide functionality to manage, clean and match highfrequency
trades and quotes data, calculate various liquidity measures, estimate and
forecast volatility, detect price jumps and investigate microstructure noise and intraday
periodicity.
Author: Kris Boudt [aut, cre] (<https://orcid.org/0000-0002-1000-5142>),
Jonathan Cornelissen [aut],
Scott Payseur [aut],
Giang Nguyen [ctb],
Onno Kleen [aut] (<https://orcid.org/0000-0003-4731-4640>),
Emil Sjoerup [aut]
Maintainer: Kris Boudt <kris.boudt@ugent.be>
Diff between highfrequency versions 0.9.0 dated 2021-06-11 and 0.9.1 dated 2021-11-02
highfrequency-0.9.0/highfrequency/build |only highfrequency-0.9.0/highfrequency/inst |only highfrequency-0.9.0/highfrequency/vignettes |only highfrequency-0.9.1/highfrequency/DESCRIPTION | 17 highfrequency-0.9.1/highfrequency/MD5 | 53 - highfrequency-0.9.1/highfrequency/NAMESPACE | 1 highfrequency-0.9.1/highfrequency/NEWS.md | 4 highfrequency-0.9.1/highfrequency/R/HARmodel.R | 3 highfrequency-0.9.1/highfrequency/R/dataHandling.R | 9 highfrequency-0.9.1/highfrequency/R/internalDataHandling.R | 13 highfrequency-0.9.1/highfrequency/R/jumpTests.R | 43 - highfrequency-0.9.1/highfrequency/R/realizedMeasures.R | 333 +++------- highfrequency-0.9.1/highfrequency/R/realizedMeasuresInference.R | 2 highfrequency-0.9.1/highfrequency/man/ReMeDI.Rd | 4 highfrequency-0.9.1/highfrequency/man/ReMeDIAsymptoticVariance.Rd | 8 highfrequency-0.9.1/highfrequency/man/knChooseReMeDI.Rd | 4 highfrequency-0.9.1/highfrequency/man/rCholCov.Rd | 2 highfrequency-0.9.1/highfrequency/src/RcppExports.cpp | 5 highfrequency-0.9.1/highfrequency/tests/testthat/Rplots.pdf |binary highfrequency-0.9.1/highfrequency/tests/testthat/test_internals_utilities.R | 4 highfrequency-0.9.1/highfrequency/tests/testthat/tests_data_handling.R | 63 + highfrequency-0.9.1/highfrequency/tests/testthat/tests_driftBursts.R | 6 highfrequency-0.9.1/highfrequency/tests/testthat/tests_jump_tests.R | 16 highfrequency-0.9.1/highfrequency/tests/testthat/tests_leadLag.R | 3 highfrequency-0.9.1/highfrequency/tests/testthat/tests_liquidity_measures.R | 40 - highfrequency-0.9.1/highfrequency/tests/testthat/tests_models.R | 7 highfrequency-0.9.1/highfrequency/tests/testthat/tests_realized_measures.R | 51 - highfrequency-0.9.1/highfrequency/tests/testthat/tests_spotvol_and_drift.R | 6 28 files changed, 295 insertions(+), 402 deletions(-)
Title: Fast FFT and DCT Based on the FFTW Library
Description: Provides a simple and efficient wrapper around the fastest
Fourier transform in the west (FFTW) library <http://www.fftw.org/>.
Author: Olaf Mersmann [aut],
Sebastian Krey [ctb],
Uwe Ligges [ctb, cre]
Maintainer: Uwe Ligges <ligges@statistik.tu-dortmund.de>
Diff between fftw versions 1.0-6 dated 2020-02-24 and 1.0-6.1 dated 2021-11-02
DESCRIPTION | 6 MD5 | 6 configure | 2441 ++++++++++++++++++++++++++++++++++++++--------------------- configure.ac | 7 4 files changed, 1606 insertions(+), 854 deletions(-)
Title: Reliability Diagrams Using Isotonic Regression
Description: Checking the reliability of predictions via the CORP approach,
which generates provably statistically 'C'onsistent, 'O'ptimally binned, and
'R'eproducible reliability diagrams using the 'P'ool-adjacent-violators
algorithm. See Dimitriadis, Gneiting, Jordan (2021) <doi:10.1073/pnas.2016191118>.
Author: Timo Dimitriadis [aut],
Alexander I. Jordan [aut, cre]
Maintainer: Alexander I. Jordan <alexander.jordan@h-its.org>
Diff between reliabilitydiag versions 0.1.3 dated 2020-11-20 and 0.2.0 dated 2021-11-02
DESCRIPTION | 11 + MD5 | 33 ++--- NAMESPACE | 3 R/coercion.R | 39 +++--- R/data.R | 4 R/plot.R | 234 ++++++++++++++++++++++++++------------- R/region_method.R | 83 ++++++++----- R/reliabilitydiag.R | 4 R/summary.R | 11 + R/utils.R | 8 + build |only inst/CITATION | 31 +++-- man/figures/README-example-1.png |binary man/plot.reliabilitydiag.Rd | 30 ++++- man/precip_Niamey_2016.Rd | 86 +++++++------- man/reexports.Rd | 33 ++--- man/reliabilitydiag.Rd | 4 man/summary.reliabilitydiag.Rd | 11 + 18 files changed, 391 insertions(+), 234 deletions(-)
More information about reliabilitydiag at CRAN
Permanent link
Title: Summary Tables and Plots for Statistical Models and Data:
Beautiful, Customizable, and Publication-Ready
Description: Create beautiful and customizable tables to summarize several
statistical models side-by-side. Draw coefficient plots, multi-level
cross-tabs, dataset summaries, balance tables (a.k.a. "Table 1s"), and
correlation matrices. This package supports dozens of statistical models,
and it can produce tables in HTML, LaTeX, Word, Markdown, PDF, PowerPoint,
Excel, RTF, JPG, or PNG. Tables can easily be embedded in 'Rmarkdown' or
'knitr' dynamic documents.
Author: Vincent Arel-Bundock [aut, cre]
(<https://orcid.org/0000-0003-2042-7063>),
Joachim Gassen [ctb] (<https://orcid.org/0000-0003-4364-2911>),
Nathan Eastwood [ctb],
Nick Huntington-Klein [ctb] (<https://orcid.org/0000-0002-7352-3991>),
Moritz Schwarz [ctb] (<https://orcid.org/0000-0003-0340-3780>),
Benjamin Elbers [ctb] (0000-0001-5392-3448),
Grant McDermott [ctb] (<https://orcid.org/0000-0001-7883-8573>)
Maintainer: Vincent Arel-Bundock <vincent.arel-bundock@umontreal.ca>
Diff between modelsummary versions 0.9.2 dated 2021-09-29 and 0.9.3 dated 2021-11-02
DESCRIPTION | 31 +-- MD5 | 108 ++++++----- NEWS.md | 16 + R/datasummary.R | 8 R/datasummary_balance.R | 72 +++++-- R/datasummary_correlation.R | 7 R/datasummary_skim.R | 4 R/factory.R | 2 R/factory_dataframe.R | 4 R/factory_gt.R | 1 R/factory_kableExtra.R | 3 R/format_gof.R | 36 --- R/get_estimates.R | 3 R/get_gof.R | 10 - R/glance_custom.R | 1 R/methods_fixest.R | 2 R/methods_stats.R |only R/modelsummary.R | 81 ++++++-- R/modelsummary_wide.R | 10 - R/sanitize_gof_map.R |only R/sanity_checks.R | 16 - R/utils_rounding.R | 5 R/utils_stats.R |only README.md | 2 build/modelsummary.pdf |binary inst/WORDLIST | 1 man/datasummary_balance.Rd | 7 man/datasummary_df.Rd | 2 man/get_estimates.Rd | 2 man/get_gof.Rd | 2 man/get_vcov.Rd | 2 man/glance_custom_internal.lm.Rd |only man/modelplot.Rd | 2 man/modelsummary.Rd | 2 man/modelsummary_wide.Rd | 10 - man/msummary.Rd | 2 tests/testthat/_snaps/datasummary_balance.md |only tests/testthat/_snaps/escape.md | 2 tests/testthat/_snaps/gt.md | 18 - tests/testthat/_snaps/huxtable.md | 2 tests/testthat/_snaps/kableExtra.md | 4 tests/testthat/_snaps/missing.md | 4 tests/testthat/_snaps/rounding.md |only tests/testthat/test-coef_map.R | 11 - tests/testthat/test-custom.R | 19 +- tests/testthat/test-datasummary_balance.R | 68 +++++++ tests/testthat/test-datasummary_skim.R | 8 tests/testthat/test-escape.R | 6 tests/testthat/test-gof.R | 15 - tests/testthat/test-group.R | 34 +-- tests/testthat/test-huxtable.R | 10 - tests/testthat/test-missing.R | 4 tests/testthat/test-modelsummary_get.R | 2 tests/testthat/test-modelsummary_wide.R | 244 +++++++++++++-------------- tests/testthat/test-pkg-fixest.R |only tests/testthat/test-pkg-stats.R |only tests/testthat/test-rounding.R | 6 tests/testthat/test-statistic_override.R | 2 tests/testthat/test-vcov.R | 6 59 files changed, 529 insertions(+), 390 deletions(-)
Title: 'GeoNetwork' API R Interface
Description: Provides an R interface to the 'GeoNetwork' API (<https://geonetwork-opensource.org/#api>) allowing to upload and publish metadata in a 'GeoNetwork' web-application and expose it to OGC CSW.
Author: Emmanuel Blondel [aut, cre] (<https://orcid.org/0000-0002-5870-5762>)
Maintainer: Emmanuel Blondel <emmanuel.blondel1@gmail.com>
Diff between geonapi versions 0.4 dated 2020-08-05 and 0.5 dated 2021-11-02
DESCRIPTION | 10 MD5 | 30 - NAMESPACE | 3 R/GNAbstractManager.R |only R/GNLegacyAPIManager.R |only R/GNManager.R | 671 +----------------------------------- R/GNOpenAPIManager.R |only R/GNUtils.R | 22 - R/geonapi.R | 6 README.md | 9 man/GNAbstractManager.Rd |only man/GNLegacyAPIManager.Rd |only man/GNManager.Rd | 116 ------ man/GNOpenAPIManager.Rd |only man/GNUtils.Rd | 2 man/geonapi.Rd | 6 tests/test-all.R | 2 tests/testthat/test_GNManager.R | 69 +++ tests/testthat/test_GNRESTRequest.R | 1 19 files changed, 152 insertions(+), 795 deletions(-)
More information about DominoDataCapture at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-04-24 0.1.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-06-03 0.0-7
2019-08-01 0.0-5
2019-04-11 0.0-3
2018-06-01 0.0-2
2017-07-14 0.0-1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-09-22 0.1-10
2021-08-04 0.1-9
2021-06-03 0.1-8
2019-08-01 0.1-7
2019-04-11 0.1-6
2018-10-25 0.1-4
2018-06-01 0.1-3
2017-07-08 0.1-2
2017-03-04 0.1-1
2017-01-10 0.1-0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-10-12 0.1.0
Title: Stepwise Elimination and Term Reordering for Mixed-Effects
Regression
Description: Finds the largest possible regression model that will still converge
for various types of regression analyses (including mixed models and generalized
additive models) and then optionally performs stepwise elimination similar to the
forward and backward effect-selection methods in SAS, based on the change in
log-likelihood or its significance, Akaike's Information Criterion, the Bayesian
Information Criterion, the explained deviance, or the F-test of the change in R².
Author: Cesko C. Voeten [aut, cre] (<https://orcid.org/0000-0003-4687-9973>)
Maintainer: Cesko C. Voeten <cvoeten@gmail.com>
Diff between buildmer versions 2.1 dated 2021-09-16 and 2.2 dated 2021-11-02
buildmer-2.1/buildmer/tests/testthat/test-test-add.terms.R |only buildmer-2.2/buildmer/ChangeLog | 9 buildmer-2.2/buildmer/DESCRIPTION | 6 buildmer-2.2/buildmer/MD5 | 18 buildmer-2.2/buildmer/R/directions.R | 2 buildmer-2.2/buildmer/R/elim.R | 36 buildmer-2.2/buildmer/R/utility.R | 14 buildmer-2.2/buildmer/build/vignette.rds |binary buildmer-2.2/buildmer/inst/doc/buildmer.R | 432 ++-- buildmer-2.2/buildmer/inst/doc/buildmer.html | 1326 +++++++------ buildmer-2.2/buildmer/tests/testthat/test-add.terms.R |only 11 files changed, 1022 insertions(+), 821 deletions(-)
Title: R Interface to the 'DieHarder' RNG Test Suite
Description: The 'RDieHarder' package provides an R interface to
the 'DieHarder' suite of random number generators and tests that
was developed by Robert G. Brown and David Bauer, extending
earlier work by George Marsaglia and others. The 'DieHarder'
library code is included.
Author: Dirk Eddelbuettel, Robert G Brown, David Bauer
plus contributors to DieHarder
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RDieHarder versions 0.2.1 dated 2019-12-07 and 0.2.2 dated 2021-11-02
RDieHarder-0.2.1/RDieHarder/src/libdieharder/Makefile |only RDieHarder-0.2.2/RDieHarder/ChangeLog | 47 + RDieHarder-0.2.2/RDieHarder/DESCRIPTION | 15 RDieHarder-0.2.2/RDieHarder/MD5 | 155 ++--- RDieHarder-0.2.2/RDieHarder/README.md | 21 RDieHarder-0.2.2/RDieHarder/build/vignette.rds |binary RDieHarder-0.2.2/RDieHarder/configure | 10 RDieHarder-0.2.2/RDieHarder/configure.ac | 22 RDieHarder-0.2.2/RDieHarder/inst/doc/RDieHarder.pdf |binary RDieHarder-0.2.2/RDieHarder/man/dieharder.Rd | 3 RDieHarder-0.2.2/RDieHarder/src/Makevars.in | 120 ++++ RDieHarder-0.2.2/RDieHarder/src/Makevars.win | 115 +++- RDieHarder-0.2.2/RDieHarder/src/libdieharder/Vtest.c | 28 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/Xtest.c | 4 RDieHarder-0.2.2/RDieHarder/src/libdieharder/bits.c | 275 +++++----- RDieHarder-0.2.2/RDieHarder/src/libdieharder/bits.cruft | 114 ++-- RDieHarder-0.2.2/RDieHarder/src/libdieharder/chisq.c | 38 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/countx.c | 21 RDieHarder-0.2.2/RDieHarder/src/libdieharder/dab_birthdays1.c | 20 RDieHarder-0.2.2/RDieHarder/src/libdieharder/dab_dct.c | 4 RDieHarder-0.2.2/RDieHarder/src/libdieharder/dab_filltree.c | 9 RDieHarder-0.2.2/RDieHarder/src/libdieharder/dab_filltree2.c | 4 RDieHarder-0.2.2/RDieHarder/src/libdieharder/dab_opso2.c | 2 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_2dsphere.c | 26 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_3dsphere.c | 8 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_birthdays.c | 24 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_bitstream.c | 68 +- RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_count_1s_byte.c | 26 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_count_1s_stream.c | 34 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_craps.c | 4 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_dna.c | 6 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_operm5.c | 26 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_opso.c | 4 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_oqso.c | 4 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_parking_lot.c | 2 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_rank_32x32.c | 12 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_rank_6x8.c | 12 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_runs.c | 14 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_squeeze.c | 6 RDieHarder-0.2.2/RDieHarder/src/libdieharder/diehard_sums.c | 32 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/dieharder/libdieharder.h | 3 RDieHarder-0.2.2/RDieHarder/src/libdieharder/dieharder_rng_types.c | 8 RDieHarder-0.2.2/RDieHarder/src/libdieharder/dieharder_test_types.c | 2 RDieHarder-0.2.2/RDieHarder/src/libdieharder/histogram.c | 36 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/kstest.c | 52 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/marsaglia_tsang_gcd.c | 40 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/marsaglia_tsang_gorilla.c | 4 RDieHarder-0.2.2/RDieHarder/src/libdieharder/parse.c | 19 RDieHarder-0.2.2/RDieHarder/src/libdieharder/prob.c | 4 RDieHarder-0.2.2/RDieHarder/src/libdieharder/random_seed.c | 4 RDieHarder-0.2.2/RDieHarder/src/libdieharder/rank.c | 36 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/rgb_bitdist.c | 48 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/rgb_bitdist.cruft | 48 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/rgb_kstest_test.c | 6 RDieHarder-0.2.2/RDieHarder/src/libdieharder/rgb_lagged_sums.c | 6 RDieHarder-0.2.2/RDieHarder/src/libdieharder/rgb_lmn.c | 6 RDieHarder-0.2.2/RDieHarder/src/libdieharder/rgb_minimum_distance.c | 28 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/rgb_operm.c | 144 ++--- RDieHarder-0.2.2/RDieHarder/src/libdieharder/rgb_permutations.c | 86 +-- RDieHarder-0.2.2/RDieHarder/src/libdieharder/rgb_persist.c | 8 RDieHarder-0.2.2/RDieHarder/src/libdieharder/rgb_timing.c | 2 RDieHarder-0.2.2/RDieHarder/src/libdieharder/rng_dev_arandom.c | 12 RDieHarder-0.2.2/RDieHarder/src/libdieharder/rng_dev_random.c | 12 RDieHarder-0.2.2/RDieHarder/src/libdieharder/rng_dev_urandom.c | 12 RDieHarder-0.2.2/RDieHarder/src/libdieharder/rng_file_input.c | 78 +- RDieHarder-0.2.2/RDieHarder/src/libdieharder/rng_file_input_raw.c | 44 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/rng_jenkins.c | 10 RDieHarder-0.2.2/RDieHarder/src/libdieharder/rng_stdin_input_raw.c | 12 RDieHarder-0.2.2/RDieHarder/src/libdieharder/rng_uvag.c | 14 RDieHarder-0.2.2/RDieHarder/src/libdieharder/rngav.c | 5 RDieHarder-0.2.2/RDieHarder/src/libdieharder/rngs_gnu_r.c | 48 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/sample.c | 6 RDieHarder-0.2.2/RDieHarder/src/libdieharder/skein_block64.c | 6 RDieHarder-0.2.2/RDieHarder/src/libdieharder/static_get_bits.c | 48 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/std_test.c | 20 RDieHarder-0.2.2/RDieHarder/src/libdieharder/sts_monobit.c | 10 RDieHarder-0.2.2/RDieHarder/src/libdieharder/sts_runs.c | 6 RDieHarder-0.2.2/RDieHarder/src/libdieharder/sts_serial.c | 48 - RDieHarder-0.2.2/RDieHarder/src/libdieharder/version.c | 16 79 files changed, 1300 insertions(+), 1032 deletions(-)
Title: Simulation and Analysis of Random Fields
Description: Methods for the inference on and the simulation of Gaussian fields are provided. Furthermore, methods for the simulation of extreme value random fields are provided. Main geostatistical parts are based on the books by Christian Lantuejoul <doi:10.1007/978-3-662-04808-5>, Jean-Paul Chiles and Pierre Delfiner <doi:10.1002/9781118136188> and Noel A. Cressie <doi:10.1002/9781119115151>.
Author: Martin Schlather [aut, cre], Alexander Malinowski [aut], Marco Oesting [aut], Daphne Boecker [aut], Kirstin Strokorb [aut], Sebastian Engelke [aut], Johannes Martini [aut], Felix Ballani [aut], Olga Moreva [aut], Jonas Auel[ctr], Peter Menck [ctr], Sebastian Gross [ctr], Ulrike Ober [ctb], Paulo Ribeiro [ctb], Brian D. Ripley [ctb], Richard Singleton [ctb], Ben Pfaff [ctb], R Core Team [ctb]
Maintainer: Martin Schlather <schlather@math.uni-mannheim.de>
Diff between RandomFields versions 3.3.10 dated 2021-09-22 and 3.3.13 dated 2021-11-02
DESCRIPTION | 8 +-- MD5 | 105 ++++++++++++++++++++++--------------------- configure | 22 ++++----- configure.ac | 6 +- src/Brown.cc | 1 src/Coordinate_systems.cc | 7 ++ src/Error.cc | 8 --- src/Gneiting.cc | 4 - src/Huetchen.cc | 1 src/InternalCov.cc | 1 src/KeyInfo.cc | 24 ++++++--- src/MLE.cc | 3 - src/NULL.cc | 1 src/Options.cc | 106 +++++--------------------------------------- src/Options.h | 62 ++++++++++++++----------- src/RF.h | 23 ++++++--- src/RMS.cc | 1 src/Specific.cc | 1 src/auxiliary.cc | 13 ++--- src/basic.h | 1 src/brownresnick.cc | 3 - src/circulant.cc | 19 ++++--- src/def.h | 7 ++ src/direct.cc | 3 - src/extern.cc |only src/extern.h |only src/extremes.cc | 3 - src/families.cc | 3 - src/fftVario.cc | 1 src/gauss.cc | 1 src/gausslikeli.cc | 1 src/getNset.cc | 1 src/hyperplan.cc | 1 src/init.general.cc | 1 src/init.others.cc | 4 - src/intrinsics.h | 16 ++++-- src/kleinkram.cc | 2 src/nugget.cc | 1 src/operator.cc | 1 src/operator.gaussmethod.cc | 1 src/parallel_simd.h |only src/plusmal.cc | 1 src/primitive.cov.cc | 3 - src/primitive.gauss.mix.cc | 1 src/primitive.others.cc | 1 src/rf_interfaces.cc | 3 + src/sequential.cc | 3 - src/shape.cc | 1 src/spectral.cc | 1 src/startGetNset.cc | 1 src/tbm.cc | 6 ++ src/trend.cc | 1 src/userinterfaces.cc | 1 src/variogramAndCo.cc | 1 src/zzz.c | 2 55 files changed, 245 insertions(+), 248 deletions(-)
Title: An R Interface to the Onigmo Regular Expression Library
Description: Provides an alternative to R's built-in functionality for handling
regular expressions, based on the Onigmo library. Offers first-class
compiled regex objects, partial matching and function-based substitutions,
amongst other features.
Author: Jon Clayden, based on Onigmo by K. Kosako and K. Takata
Maintainer: Jon Clayden <code@clayden.org>
Diff between ore versions 1.7.0 dated 2021-10-12 and 1.7.1.1 dated 2021-11-02
ore-1.7.0/ore/data |only ore-1.7.0/ore/man/glass.Rd |only ore-1.7.1.1/ore/DESCRIPTION | 9 ++-- ore-1.7.1.1/ore/MD5 | 36 +++++++++---------- ore-1.7.1.1/ore/NEWS | 22 +++++++++++ ore-1.7.1.1/ore/R/es.R | 2 - ore-1.7.1.1/ore/R/file.R | 4 +- ore-1.7.1.1/ore/R/match.R | 22 +++++++---- ore-1.7.1.1/ore/R/zzz.R | 14 ------- ore-1.7.1.1/ore/README.md | 2 - ore-1.7.1.1/ore/inst/tinytest/test-12-files.R | 13 +++---- ore-1.7.1.1/ore/man/ore_file.Rd | 4 ++ ore-1.7.1.1/ore/man/ore_search.Rd | 22 +++++++---- ore-1.7.1.1/ore/src/Makevars | 2 - ore-1.7.1.1/ore/src/compile.c | 11 +++++ ore-1.7.1.1/ore/src/compile.h | 2 + ore-1.7.1.1/ore/src/match.c | 19 ++++++++-- ore-1.7.1.1/ore/src/split.c | 4 ++ ore-1.7.1.1/ore/src/subst.c | 48 +++++++++++++++++++++++--- ore-1.7.1.1/ore/src/text.c | 18 +++++++-- 20 files changed, 179 insertions(+), 75 deletions(-)
Title: A New Format for Lossless and Lossy Image Compression
Description: Lossless webp images are 26% smaller in size compared to PNG. Lossy
webp images are 25-34% smaller in size compared to JPEG. This package reads
and writes webp images into a 3 (rgb) or 4 (rgba) channel bitmap array using
conventions from the 'jpeg' and 'png' packages.
Author: Jeroen Ooms
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between webp versions 1.0 dated 2019-03-04 and 1.1.0 dated 2021-11-02
webp-1.0/webp/README.md |only webp-1.1.0/webp/DESCRIPTION | 11 ++++------ webp-1.1.0/webp/MD5 | 18 ++++++++--------- webp-1.1.0/webp/NEWS | 3 ++ webp-1.1.0/webp/R/webp.R | 6 ++++- webp-1.1.0/webp/cleanup | 2 - webp-1.1.0/webp/configure | 40 ++++++++++++++++++++------------------- webp-1.1.0/webp/man/figures |only webp-1.1.0/webp/man/read_webp.Rd | 3 +- webp-1.1.0/webp/src/Makevars.win | 2 + webp-1.1.0/webp/src/webp.c | 9 ++++++-- 11 files changed, 55 insertions(+), 39 deletions(-)
Title: Simulation-Based Landscape Construction for Dynamical Systems
Description: A toolbox for constructing potential landscapes for dynamical systems using Monte-Carlo simulation.
The method is based on the generalized potential landscape function by Wang et al. (2008) <doi:10.1073/pnas.0800579105>
(also see Zhou & Li, 2016 <doi:10.1063/1.4943096> for further mathematical discussions).
Especially suitable for psychological formal models.
Author: Jingmeng Cui [aut, cre] (<https://orcid.org/0000-0003-3421-8457>)
Maintainer: Jingmeng Cui <jingmeng.cui@outlook.com>
Diff between simlandr versions 0.1.1 dated 2021-08-16 and 0.1.2 dated 2021-11-02
DESCRIPTION | 22 ++++--- MD5 | 111 +++++++++++++++++++------------------- NAMESPACE | 1 NEWS.md | 13 +++- R/barrier.R | 29 +++++++-- R/barrier_batch.R | 16 ++++- R/batch_simulation.R | 59 ++++++++------------ R/check_conv.R | 4 + R/landscape_plot.R | 9 ++- R/methods_landscape.R | 1 R/multiple_simulation_landscape.R | 8 ++ R/single_simulation_landscape.R | 22 ++++--- R/test_function.R |only build/vignette.rds |binary inst/doc/barrier.html | 4 - inst/doc/landscape.Rmd | 2 inst/doc/landscape.html | 16 ++--- inst/doc/simulation.html | 34 +++++------ man/attach_all_matrices.Rd | 3 + man/batch_simulation.Rd | 6 +- man/calculate_barrier.Rd | 97 +++++++++++++++------------------ man/calculate_barrier_2d.Rd | 3 + man/calculate_barrier_2d_batch.Rd | 63 +++++++++++---------- man/calculate_barrier_3d.Rd | 3 + man/calculate_barrier_3d_batch.Rd | 3 + man/check_conv.Rd | 3 + man/fill_in_struct.Rd | 38 +++++++------ man/find_local_min_2d.Rd | 39 +++++++------ man/find_local_min_3d.Rd | 51 +++++++++-------- man/get_barrier_height.Rd | 3 + man/get_dist.Rd | 35 ++++++----- man/get_geom.Rd | 3 + man/hash_big.matrix-class.Rd | 88 +++++++++++++++--------------- man/make_2d_density.Rd | 46 +++++++-------- man/make_2d_kernel_dist.Rd | 68 +++++++++++------------ man/make_2d_matrix.Rd | 69 ++++++++++++----------- man/make_2d_tidy_dist.Rd | 42 +++++++------- man/make_3d_animation.Rd | 77 +++++++++++++------------- man/make_3d_kernel_dist.Rd | 60 ++++++++++---------- man/make_3d_matrix.Rd | 73 +++++++++++++----------- man/make_3d_static.Rd | 64 ++++++++++----------- man/make_3d_tidy_dist.Rd | 42 +++++++------- man/make_4d_static.Rd | 64 ++++++++++----------- man/make_barrier_grid_2d.Rd | 59 ++++++++++---------- man/make_barrier_grid_3d.Rd | 59 ++++++++++---------- man/new_var_set.Rd | 99 +++++++++++++++------------------ man/npar.Rd |only man/nvar.Rd |only man/plot.barrier.Rd |only man/plot.landscape.Rd | 43 +++++++------- man/print.batch_simulation.Rd | 39 +++++++------ man/print.check_conv.Rd | 39 +++++++------ man/print.var_grid.Rd | 39 +++++++------ man/print.var_set.Rd | 39 +++++++------ man/reverselog_trans.Rd | 31 +++++----- man/save_landscape.Rd | 45 ++++++++------- man/sim_fun_test.Rd | 4 - man/sim_fun_test2.Rd |only vignettes/landscape.Rmd | 2 59 files changed, 1003 insertions(+), 889 deletions(-)
Title: Interface to the Knoema API
Description: Using this package, users can access to the largest collection of public data and statistics on the Internet featuring about 2.5 billion time series from thousands of sources collected in 'Knoema' repository and use rich R calculations in order to analyze the data. Because data in 'Knoema' is time series data, 'Knoema' function offers data in a number of formats usable in R such as 'ts', 'xts' or 'zoo'. For more information about 'Knoema' API go to <https://knoema.com/dev/docs>.
Author: Pavel Pimenov [aut, cre],
Ekaterina Chirkova [aut],
Aleksey Filippov [aut],
Knoema [cph]
Maintainer: Pavel Pimenov <pimenov@knoema.com>
Diff between Knoema versions 0.1.16 dated 2018-05-11 and 0.1.18 dated 2021-11-02
DESCRIPTION | 13 MD5 | 22 - R/ApiClient.R | 2 R/knoema.R | 14 + README.md | 201 ++++++++------ man/Knoema.Rd | 94 ++++-- tests/testthat/test_dataframe.R | 132 +++------ tests/testthat/test_errors.R | 92 +----- tests/testthat/test_flat_dataset.R | 69 +---- tests/testthat/test_search_by_mnemonics.R | 122 +++------ tests/testthat/test_ts.R | 369 +++++++++++---------------- tests/testthat/test_xts_zoo.R | 403 ++++++++++++------------------ 12 files changed, 646 insertions(+), 887 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-08-14 1.3.0
2017-07-09 1.2.0
2017-06-12 1.1.0
2017-06-02 1.0.0
Title: Tools to Visualize CM SAF NetCDF Data
Description: The Satellite Application Facility on Climate Monitoring (CM SAF)
is a ground segment of the European Organization for the Exploitation of
Meteorological Satellites (EUMETSAT) and one of EUMETSATs Satellite Application
Facilities. The CM SAF contributes to the sustainable monitoring of the climate
system by providing essential climate variables related to the energy and water
cycle of the atmosphere (<http://www.cmsaf.eu>). It is a joint cooperation of eight
National Meteorological and Hydrological Services.
The 'cmsafvis' R-package provides a collection of R-operators for the analysis and
visualization of CM SAF NetCDF data.
CM SAF climate data records are provided for free via (<https://wui.cmsaf.eu/safira>).
Detailed information and test data are provided on the CM SAF webpage
(<http://www.cmsaf.eu/R_toolbox>).
Author: Steffen Kothe [aut, cre],
Danny Parsons [ctb]
Maintainer: Steffen Kothe <Steffen.Kothe@dwd.de>
Diff between cmsafvis versions 1.1.7 dated 2021-10-15 and 1.1.8 dated 2021-11-02
cmsafvis-1.1.7/cmsafvis/R/get_basename.R |only cmsafvis-1.1.7/cmsafvis/man/get_basename.Rd |only cmsafvis-1.1.8/cmsafvis/DESCRIPTION | 8 ++-- cmsafvis-1.1.8/cmsafvis/MD5 | 24 ++++++-------- cmsafvis-1.1.8/cmsafvis/NAMESPACE | 1 cmsafvis-1.1.8/cmsafvis/NEWS.md | 5 ++ cmsafvis-1.1.8/cmsafvis/R/calculate_climatology_outfile.R | 2 - cmsafvis-1.1.8/cmsafvis/R/cmsaf.hist.R | 4 +- cmsafvis-1.1.8/cmsafvis/R/cmsaf.hovmoller.R | 4 +- cmsafvis-1.1.8/cmsafvis/R/cmsaf.side.by.side.R | 4 +- cmsafvis-1.1.8/cmsafvis/R/extractFinalOutfile.R | 2 - cmsafvis-1.1.8/cmsafvis/R/extractOutfile.R | 2 - cmsafvis-1.1.8/cmsafvis/R/extractOutfileMean.R | 2 - cmsafvis-1.1.8/cmsafvis/build/partial.rdb |binary 14 files changed, 30 insertions(+), 28 deletions(-)
More information about TidyConsultant at CRAN
Permanent link
Title: Convenient Data Exchange with Microsoft Excel
Description: Allows access to data in running instance of Microsoft Excel
(e. g. 'xl[a1] = xl[b2]*3' and so on). Graphics can be transferred with
'xl[a1] = current.graphics()'. Additionally there are function for reading/writing
'Excel' files - 'xl.read.file'/'xl.save.file'. They are not fast but able to read/write
'*.xlsb'-files and password-protected files. There is an Excel workbook with
examples of calling R from Excel in the 'doc' folder. It tries to keep things as
simple as possible - there are no needs in any additional
installations besides R, only 'VBA' code in the Excel workbook.
Microsoft Excel is required for this package.
Author: Gregory Demin <excel.link.feedback@gmail.com>. To comply CRAN policy
includes source code from 'RDCOMClient' (http://www.omegahat.net/RDCOMClient/) by
Duncan Temple Lang <duncan@wald.ucdavis.edu>.
Maintainer: Gregory Demin <excel.link.feedback@gmail.com>
Diff between excel.link versions 0.9.9 dated 2021-03-21 and 0.9.10 dated 2021-11-02
DESCRIPTION | 8 +-- MD5 | 24 +++++---- NEWS | 4 + build/vignette.rds |binary inst/doc/CallingRFromExcel.Rmd | 2 inst/doc/CallingRFromExcel.html | 6 +- inst/xlsx |only src/COMError.cpp | 98 ++++++++++++++++++++++++++++++++++++---- src/RCOMObject.cpp |only src/RUtils.c | 49 ++++++++++++++++++++ src/connect.cpp | 48 +++++++++++++++++++ src/converters.cpp | 75 +++++++++++++++++++++++++++--- src/converters.h | 10 ---- vignettes/CallingRFromExcel.Rmd | 2 14 files changed, 281 insertions(+), 45 deletions(-)
Title: Core Functionality of the 'spatstat' Family
Description: Functionality for data analysis and modelling of
spatial data, mainly spatial point patterns,
in the 'spatstat' family of packages.
(Excludes analysis of spatial data on a linear network,
which is covered by the separate package 'spatstat.linnet'.)
Exploratory methods include quadrat counts, K-functions and their simulation envelopes, nearest neighbour distance and empty space statistics, Fry plots, pair correlation function, kernel smoothed intensity, relative risk estimation with cross-validated bandwidth selection, mark correlation functions, segregation indices, mark dependence diagnostics, and kernel estimates of covariate effects. Formal hypothesis tests of random pattern (chi-squared, Kolmogorov-Smirnov, Monte Carlo, Diggle-Cressie-Loosmore-Ford, Dao-Genton, two-stage Monte Carlo) and tests for covariate effects (Cox-Berman-Waller-Lawson, Kolmogorov-Smirnov, ANOVA) are also supported.
Parametric models can be fitted to point pattern data using the functions ppm(), kppm(), slrm(), dppm() similar to glm(). Types of models include Poisson, Gibbs and Cox point processes, Neyman-Scott cluster processes, and determinantal point processes. Models may involve dependence on covariates, inter-point interaction, cluster formation and dependence on marks. Models are fitted by maximum likelihood, logistic regression, minimum contrast, and composite likelihood methods.
A model can be fitted to a list of point patterns (replicated point pattern data) using the function mppm(). The model can include random effects and fixed effects depending on the experimental design, in addition to all the features listed above.
Fitted point process models can be simulated, automatically. Formal hypothesis tests of a fitted model are supported (likelihood ratio test, analysis of deviance, Monte Carlo tests) along with basic tools for model selection (stepwise(), AIC()) and variable selection (sdr). Tools for validating the fitted model include simulation envelopes, residuals, residual plots and Q-Q plots, leverage and influence diagnostics, partial residuals, and added variable plots.
Author: Adrian Baddeley [aut, cre],
Rolf Turner [aut],
Ege Rubak [aut],
Kasper Klitgaard Berthelsen [ctb],
Achmad Choiruddin [ctb],
Jean-Francois Coeurjolly [ctb],
Ottmar Cronie [ctb],
Tilman Davies [ctb],
Chiara Fend [ctb],
Julian Gilbey [ctb],
Yongtao Guan [ctb],
Ute Hahn [ctb],
Kassel Hingee [ctb],
Abdollah Jalilian [ctb],
Marie-Colette van Lieshout [ctb],
Greg McSwiggan [ctb],
Tuomas Rajala [ctb],
Suman Rakshit [ctb],
Dominic Schuhmacher [ctb],
Rasmus Plenge Waagepetersen [ctb],
Hangsheng Wang [ctb]
Maintainer: Adrian Baddeley <Adrian.Baddeley@curtin.edu.au>
Diff between spatstat.core versions 2.3-0 dated 2021-07-16 and 2.3-1 dated 2021-11-02
spatstat.core-2.3-0/spatstat.core/src/metricPdist.c |only spatstat.core-2.3-0/spatstat.core/src/metricPdist.h |only spatstat.core-2.3-1/spatstat.core/DESCRIPTION | 11 spatstat.core-2.3-1/spatstat.core/MD5 | 116 ++-- spatstat.core-2.3-1/spatstat.core/NAMESPACE | 15 spatstat.core-2.3-1/spatstat.core/NEWS | 228 ++++++++ spatstat.core-2.3-1/spatstat.core/R/Kest.R | 16 spatstat.core-2.3-1/spatstat.core/R/Kinhom.R | 8 spatstat.core-2.3-1/spatstat.core/R/Kmulti.R | 24 spatstat.core-2.3-1/spatstat.core/R/clusterfunctions.R | 36 + spatstat.core-2.3-1/spatstat.core/R/clusterinfo.R | 4 spatstat.core-2.3-1/spatstat.core/R/distcdf.R | 254 ++++++---- spatstat.core-2.3-1/spatstat.core/R/edgeRipley.R | 47 + spatstat.core-2.3-1/spatstat.core/R/envelope.R | 5 spatstat.core-2.3-1/spatstat.core/R/fii.R | 10 spatstat.core-2.3-1/spatstat.core/R/fv.R | 102 ++-- spatstat.core-2.3-1/spatstat.core/R/kppm.R | 81 +-- spatstat.core-2.3-1/spatstat.core/R/mincontrast.R | 74 +- spatstat.core-2.3-1/spatstat.core/R/mpl.R | 12 spatstat.core-2.3-1/spatstat.core/R/objsurf.R | 21 spatstat.core-2.3-1/spatstat.core/R/pcfinhom.R | 8 spatstat.core-2.3-1/spatstat.core/R/plot.fv.R | 63 +- spatstat.core-2.3-1/spatstat.core/R/randomseg.R | 25 spatstat.core-2.3-1/spatstat.core/R/relrisk.R | 2 spatstat.core-2.3-1/spatstat.core/R/scriptUtils.R | 6 spatstat.core-2.3-1/spatstat.core/R/segtest.R | 10 spatstat.core-2.3-1/spatstat.core/R/subfits.R | 12 spatstat.core-2.3-1/spatstat.core/R/summary.kppm.R | 20 spatstat.core-2.3-1/spatstat.core/R/sysdata.rda |binary spatstat.core-2.3-1/spatstat.core/R/thresholding.R |only spatstat.core-2.3-1/spatstat.core/R/varcount.R | 111 +++- spatstat.core-2.3-1/spatstat.core/R/zclustermodel.R | 31 + spatstat.core-2.3-1/spatstat.core/build |only spatstat.core-2.3-1/spatstat.core/inst/CITATION | 8 spatstat.core-2.3-1/spatstat.core/inst/doc/packagesizes.txt | 2 spatstat.core-2.3-1/spatstat.core/man/BadGey.Rd | 2 spatstat.core-2.3-1/spatstat.core/man/Hybrid.Rd | 2 spatstat.core-2.3-1/spatstat.core/man/Kmulti.Rd | 6 spatstat.core-2.3-1/spatstat.core/man/clusterfit.Rd | 4 spatstat.core-2.3-1/spatstat.core/man/collapse.fv.Rd | 28 - spatstat.core-2.3-1/spatstat.core/man/distcdf.Rd | 19 spatstat.core-2.3-1/spatstat.core/man/is.hybrid.Rd | 2 spatstat.core-2.3-1/spatstat.core/man/methods.fii.Rd | 17 spatstat.core-2.3-1/spatstat.core/man/methods.zclustermodel.Rd | 18 spatstat.core-2.3-1/spatstat.core/man/mincontrast.Rd | 31 - spatstat.core-2.3-1/spatstat.core/man/ppm.Rd | 7 spatstat.core-2.3-1/spatstat.core/man/ppm.ppp.Rd | 25 spatstat.core-2.3-1/spatstat.core/man/reload.or.compute.Rd | 6 spatstat.core-2.3-1/spatstat.core/man/rjitter.psp.Rd |only spatstat.core-2.3-1/spatstat.core/man/rmhmodel.default.Rd | 2 spatstat.core-2.3-1/spatstat.core/man/segregation.test.Rd | 9 spatstat.core-2.3-1/spatstat.core/man/spatstat.core-deprecated.Rd | 3 spatstat.core-2.3-1/spatstat.core/man/spatstat.core-internal.Rd | 10 spatstat.core-2.3-1/spatstat.core/man/thresholdCI.Rd |only spatstat.core-2.3-1/spatstat.core/man/thresholdSelect.Rd |only spatstat.core-2.3-1/spatstat.core/man/update.kppm.Rd | 6 spatstat.core-2.3-1/spatstat.core/man/varcount.Rd | 4 spatstat.core-2.3-1/spatstat.core/src/corrections.c | 132 ----- spatstat.core-2.3-1/spatstat.core/src/init.c | 1 spatstat.core-2.3-1/spatstat.core/src/proto.h | 1 spatstat.core-2.3-1/spatstat.core/src/ripleybox.h |only spatstat.core-2.3-1/spatstat.core/tests/testsK.R | 12 spatstat.core-2.3-1/spatstat.core/tests/testsR1.R | 11 63 files changed, 1127 insertions(+), 593 deletions(-)
Title: Quantitative Analysis and Visualization of LUCC
Description: Tools for the analysis of land use and cover (LUC) time series. It
includes support for loading spatiotemporal raster data and synthesized
spatial plotting. Several LUC change (LUCC) metrics in regular or irregular
time intervals can be extracted and visualized through one- and multistep
sankey and chord diagrams. A complete intensity analysis according to
Aldwaik and Pontius (2012) <doi:10.1016/j.landurbplan.2012.02.010> is
implemented, including tools for the generation of standardized multilevel
output graphics.
Author: Reginal Exavier [aut, cre] (<https://orcid.org/0000-0002-5237-523X>),
Peter Zeilhofer [aut]
Maintainer: Reginal Exavier <reginalexavier@rocketmail.com>
Diff between OpenLand versions 1.0.1 dated 2020-04-19 and 1.0.2 dated 2021-11-02
OpenLand-1.0.1/OpenLand/man/plot-methods.Rd |only OpenLand-1.0.2/OpenLand/DESCRIPTION | 8 OpenLand-1.0.2/OpenLand/MD5 | 102 OpenLand-1.0.2/OpenLand/NAMESPACE | 70 OpenLand-1.0.2/OpenLand/NEWS.md | 24 OpenLand-1.0.2/OpenLand/R/OpenLand-package.R | 68 OpenLand-1.0.2/OpenLand/R/contingencyTable.R | 365 - OpenLand-1.0.2/OpenLand/R/data.R | 110 OpenLand-1.0.2/OpenLand/R/demolandscape.R | 172 OpenLand-1.0.2/OpenLand/R/generalfunctions.R | 366 - OpenLand-1.0.2/OpenLand/R/generic_method.R | 78 OpenLand-1.0.2/OpenLand/R/intensityAnalysis.R | 892 +- OpenLand-1.0.2/OpenLand/R/intensityClass.R | 552 - OpenLand-1.0.2/OpenLand/R/otherplots.R | 1058 +- OpenLand-1.0.2/OpenLand/R/plotMethods.R | 1024 +- OpenLand-1.0.2/OpenLand/R/rasters_input.R | 158 OpenLand-1.0.2/OpenLand/README.md | 597 - OpenLand-1.0.2/OpenLand/build/partial.rdb |binary OpenLand-1.0.2/OpenLand/build/vignette.rds |binary OpenLand-1.0.2/OpenLand/inst/doc/openland_vignette.R | 450 - OpenLand-1.0.2/OpenLand/inst/doc/openland_vignette.Rmd | 779 +- OpenLand-1.0.2/OpenLand/inst/doc/openland_vignette.html | 3528 ++-------- OpenLand-1.0.2/OpenLand/man/Category-class.Rd | 172 OpenLand-1.0.2/OpenLand/man/Interval-class.Rd | 60 OpenLand-1.0.2/OpenLand/man/OpenLand-package.Rd | 60 OpenLand-1.0.2/OpenLand/man/SL_2002_2014.Rd | 116 OpenLand-1.0.2/OpenLand/man/Transition-class.Rd | 202 OpenLand-1.0.2/OpenLand/man/acc_changes.Rd | 64 OpenLand-1.0.2/OpenLand/man/acessor.Rd | 58 OpenLand-1.0.2/OpenLand/man/barplotLand.Rd | 132 OpenLand-1.0.2/OpenLand/man/chordDiagramLand.Rd | 140 OpenLand-1.0.2/OpenLand/man/contingencyTable.Rd | 174 OpenLand-1.0.2/OpenLand/man/dot-demo_landscape.Rd | 122 OpenLand-1.0.2/OpenLand/man/dot-input_rasters.Rd | 84 OpenLand-1.0.2/OpenLand/man/figures/README-cat_level-1.png |binary OpenLand-1.0.2/OpenLand/man/figures/README-chordDiagram-1.png |binary OpenLand-1.0.2/OpenLand/man/figures/README-ng_plot-1.png |binary OpenLand-1.0.2/OpenLand/man/intensityAnalysis.Rd | 216 OpenLand-1.0.2/OpenLand/man/netgrossplot.Rd | 136 OpenLand-1.0.2/OpenLand/man/plot.Rd |only OpenLand-1.0.2/OpenLand/man/sankeyLand.Rd | 100 OpenLand-1.0.2/OpenLand/man/summary_dir.Rd | 64 OpenLand-1.0.2/OpenLand/man/summary_map.Rd | 58 OpenLand-1.0.2/OpenLand/tests/testthat.R | 8 OpenLand-1.0.2/OpenLand/tests/testthat/test_contingencyTable.R | 122 OpenLand-1.0.2/OpenLand/tests/testthat/test_demolandscape.R | 30 OpenLand-1.0.2/OpenLand/tests/testthat/test_generalfunctions.R | 128 OpenLand-1.0.2/OpenLand/tests/testthat/test_inputrasters.R | 72 OpenLand-1.0.2/OpenLand/tests/testthat/test_intensityAnalysis.R | 192 OpenLand-1.0.2/OpenLand/tests/testthat/test_intensityClasses.R | 202 OpenLand-1.0.2/OpenLand/tests/testthat/test_plots.R | 128 OpenLand-1.0.2/OpenLand/vignettes/openland_vignette.Rmd | 779 +- OpenLand-1.0.2/OpenLand/vignettes/papers_OpenLand.bib | 170 53 files changed, 6224 insertions(+), 7966 deletions(-)
Title: An R Package for Multiple-Group Latent Class Analysis
Description: Fits multiple-group latent class analysis (LCA) for exploring
differences between populations in the data with a multilevel structure.
There are two approaches to reflect group differences in glca:
fixed-effect LCA (Bandeen-Roche et al (1997) <doi:10.1080/01621459.1997.10473658>;
Clogg and Goodman (1985) <doi:10.2307/270847>) and nonparametric random-effect LCA
(Vermunt (2003) <doi:10.1111/j.0081-1750.2003.t01-1-00131.x>).
Author: Youngsun Kim [aut, cre],
Hwan Chung [aut]
Maintainer: Youngsun Kim <kim0sun@korea.ac.kr>
Diff between glca versions 1.3.1 dated 2021-09-04 and 1.3.3 dated 2021-11-02
DESCRIPTION | 28 ++++++++++++++++++++-------- MD5 | 24 ++++++++++++------------ R/glca.R | 1 - R/gofglca.R | 1 - R/reorder.glca.R | 1 - build/partial.rdb |binary inst/CITATION | 15 ++++++++------- inst/doc/glca.Rmd | 2 +- inst/doc/glca.html | 2 +- man/glca.Rd | 3 --- man/gofglca.Rd | 3 --- man/reorder.glca.Rd | 3 --- vignettes/glca.Rmd | 2 +- 13 files changed, 43 insertions(+), 42 deletions(-)
Title: An Interface to the Dash Ecosystem for Authoring Reactive Web
Applications
Description: A framework for building analytical web applications, Dash offers a pleasant and productive development experience. No JavaScript required.
Author: Chris Parmer [aut],
Ryan Patrick Kyle [aut] (<https://orcid.org/0000-0001-5829-9867>),
Carson Sievert [aut] (<https://orcid.org/0000-0002-4958-2844>),
Hammad Khan [aut, cre] (<https://orcid.org/0000-0003-2479-9841>),
Plotly Technologies [cph]
Maintainer: Hammad Khan <hammadkhan@plotly.com>
Diff between dash versions 0.5.0 dated 2020-06-04 and 0.9.1 dated 2021-11-02
dash-0.5.0/dash/inst/lib/dash-renderer@1.4.1 |only dash-0.9.1/dash/DESCRIPTION | 32 - dash-0.9.1/dash/LICENSE | 2 dash-0.9.1/dash/MD5 | 325 +++++++++++++++- dash-0.9.1/dash/NAMESPACE | 129 ++++++ dash-0.9.1/dash/R/all_tags.R |only dash-0.9.1/dash/R/callbacks-advanced.R |only dash-0.9.1/dash/R/dash.R | 455 ++++++++++++++++++----- dash-0.9.1/dash/R/dashBootstrapComponents.R |only dash-0.9.1/dash/R/dashCoreComponents.R |only dash-0.9.1/dash/R/dashHtmlComponents.R |only dash-0.9.1/dash/R/dashTable.R |only dash-0.9.1/dash/R/dependencies.R | 257 ++++++++++++ dash-0.9.1/dash/R/df_to_list.R |only dash-0.9.1/dash/R/imports.R | 3 dash-0.9.1/dash/R/install_snippet.R |only dash-0.9.1/dash/R/internal.R | 175 +++++++- dash-0.9.1/dash/R/simple_table.R |only dash-0.9.1/dash/R/tags.R |only dash-0.9.1/dash/R/utils-pipe.R |only dash-0.9.1/dash/R/utils.R | 367 +++++++++++++++--- dash-0.9.1/dash/R/wrappers.R |only dash-0.9.1/dash/README.md |only dash-0.9.1/dash/build |only dash-0.9.1/dash/inst/deps |only 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Title: Wrapper for 'Visa Chart Components'
Description: Provides a set of wrapper functions for 'Visa Chart Components'.
'Visa Chart Components' <https://github.com/visa/visa-chart-components> is an accessibility focused,
framework agnostic set of data experience design systems components for the web.
Author: Christopher DeMartini [aut, cre],
Jaime Tanner [aut],
Frank Elavsky [aut],
Wojtek Kostelecki [ctb],
Visa Data Experience Team [aut, fnd],
Visa, Inc. [cph]
Maintainer: Christopher DeMartini <chris.demartini.npm@gmail.com>
Diff between visachartR versions 1.1.0 dated 2021-08-20 and 1.1.1 dated 2021-11-02
visachartR-1.1.0/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-aa4275e2.js |only visachartR-1.1.0/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-as9yjuvm.entry.js |only visachartR-1.1.0/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-e9ezhzi8.system.entry.js |only visachartR-1.1.0/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-ec3018ad.system.js |only visachartR-1.1.0/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-fsgx0f7p.system.entry.js |only visachartR-1.1.0/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-jizqjque.system.entry.js |only visachartR-1.1.0/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-vmmnjaha.entry.js |only visachartR-1.1.0/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-xss1fp7t.entry.js |only visachartR-1.1.1/visachartR/DESCRIPTION | 8 +- visachartR-1.1.1/visachartR/MD5 | 30 +++++----- visachartR-1.1.1/visachartR/NEWS.md | 6 +- visachartR-1.1.1/visachartR/inst/htmlwidgets/lib/visa-chart-components/charts.esm.js | 2 visachartR-1.1.1/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-3c064bed.js |only visachartR-1.1.1/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-4plkz3vm.entry.js |only visachartR-1.1.1/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-50ea2036.system.js | 2 visachartR-1.1.1/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-axfe6fa3.system.entry.js |only visachartR-1.1.1/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-bae7bff7.system.js |only visachartR-1.1.1/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-f74220da.system.js | 2 visachartR-1.1.1/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-jirbgsep.entry.js |only visachartR-1.1.1/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-mtg4ssdd.system.entry.js |only visachartR-1.1.1/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-unxffg0f.system.entry.js |only visachartR-1.1.1/visachartR/inst/htmlwidgets/lib/visa-chart-components/p-uvnq63th.entry.js |only visachartR-1.1.1/visachartR/inst/htmlwidgets/visaChart.yaml | 2 visachartR-1.1.1/visachartR/inst/htmlwidgets/visaNodeLinkChart.yaml | 2 24 files changed, 29 insertions(+), 25 deletions(-)
Title: Nonlinear Mixed Effects Models in Population PK/PD
Description: Fit and compare nonlinear mixed-effects models in differential
equations with flexible dosing information commonly seen in pharmacokinetics
and pharmacodynamics (Almquist, Leander, and Jirstrand 2015
<doi:10.1007/s10928-015-9409-1>). Differential equation solving is
by compiled C code provided in the 'RxODE' package
(Wang, Hallow, and James 2015 <doi:10.1002/psp4.12052>).
Author: Matthew Fidler [aut] (<https://orcid.org/0000-0001-8538-6691>),
Yuan Xiong [aut],
Rik Schoemaker [aut] (<https://orcid.org/0000-0002-7538-3005>),
Justin Wilkins [aut] (<https://orcid.org/0000-0002-7099-9396>),
Wenping Wang [aut, cre],
Robert Leary [ctb],
Mason McComb [aut] (<https://orcid.org/0000-0001-9871-8616>),
Vipul Mann [aut],
Mirjam Trame [ctb],
Teun Post [ctb],
Richard Hooijmaijers [aut],
Hadley Wickham [ctb],
Dirk Eddelbuettel [cph],
Johannes Pfeifer [ctb],
Robert B. Schnabel [ctb],
Elizabeth Eskow [ctb],
Emmanuelle Comets [ctb],
Audrey Lavenu [ctb],
Marc Lavielle [ctb],
David Ardia [cph],
Katharine Mullen [cph],
Ben Goodrich [ctb]
Maintainer: Wenping Wang <wwang8198@gmail.com>
Diff between nlmixr versions 2.0.5 dated 2021-09-04 and 2.0.6 dated 2021-11-02
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS.md | 4 ++++ src/inner.cpp | 4 ++-- 4 files changed, 12 insertions(+), 8 deletions(-)
Title: Functional Time Series Analysis
Description: Functions for visualizing, modeling, forecasting and hypothesis testing of functional time series.
Author: Rob Hyndman [aut] (<https://orcid.org/0000-0002-2140-5352>),
Han Lin Shang [aut, cre, cph] (<https://orcid.org/0000-0003-1769-6430>)
Maintainer: Han Lin Shang <hanlin.shang@mq.edu.au>
Diff between ftsa versions 6.0 dated 2020-11-29 and 6.1 dated 2021-11-02
ChangeLog | 11 ++++++++--- DESCRIPTION | 13 +++++++------ MD5 | 38 ++++++++++++++++++++++++++++++++------ NAMESPACE | 24 ++++++++++++++++++++++-- R/CoDa_BayesNW.R |only R/CoDa_FPCA.R |only R/CoDa_NFR.R |only R/CoDa_recon.R |only R/GAEVfore.R |only R/GAEVforecast.R |only R/GAEVpara.R |only R/Horta_Ziegelmann_FPCA.R |only R/LQDT_FPCA.R |only R/dens2lqdNew.R |only R/ffunopare.knn.R |only R/ffunopare.knn.gcv.R |only R/getmode.R |only R/lqd2densNew.R |only R/method.FPE.R | 2 +- R/quadratic.R |only R/semimetric.L2.R |only R/skew_t_fun.R |only R/super_fun.R |only data/DJI_return.rda |only man/CoDa_BayesNW.Rd |only man/CoDa_FPCA.Rd |only man/DJI_return.Rd |only man/GAEVforecast.Rd |only man/Horta_Ziegelmann_FPCA.Rd |only man/LQDT_FPCA.Rd |only man/farforecast.Rd | 6 ++---- man/forecast.hdfpca.Rd | 2 ++ man/skew_t_fun.Rd |only 33 files changed, 74 insertions(+), 22 deletions(-)
Title: Common Mean Vector under Copula Models
Description: Estimate bivariate common mean vector under copula models with known correlation. In the current version, available copulas are the Clayton, Farlie-Gumbel-Morgenstern (FGM), and normal copulas. See Shih et al. (2019) <doi:10.1080/02331888.2019.1581782> and Shih et al. (2021) <under review> for details under the FGM and general copulas, respectively.
Author: Jia-Han Shih
Maintainer: Jia-Han Shih <tommy355097@gmail.com>
Diff between CommonMean.Copula versions 1.0.0 dated 2019-12-15 and 1.0.1 dated 2021-11-02
DESCRIPTION | 13 ++++++------- MD5 | 10 +++++----- R/CommonMean.Copula.R | 3 ++- build/partial.rdb |binary man/CommonMean.Copula-package.rd | 5 +++-- man/CommonMean.Copula.Rd | 4 +++- 6 files changed, 19 insertions(+), 16 deletions(-)
More information about CommonMean.Copula at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-01-15 0.2.0
2020-10-19 0.1.8
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-01-10 0.4.2
2020-09-07 0.4.0
2020-03-13 0.3.0
2018-05-11 0.2.1
2018-04-20 0.2.0
2018-04-10 0.1.2
2017-05-29 0.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-03-02 0.1.5
2021-03-01 0.1.4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-11-20 0.1.2
2020-06-10 0.1.1
2020-05-13 0.1.0